Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035290 | AES81493.1 | 95.441 | 329 | 15 | 0 | 1 | 329 | 45 | 373 | 0.0 | 640 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035290 | sp|Q9LEH3|PER15_IPOBA | 72.086 | 326 | 89 | 1 | 2 | 327 | 4 | 327 | 3.60e-170 | 478 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035290 | G7KVF1 | 95.441 | 329 | 15 | 0 | 1 | 329 | 45 | 373 | 0.0 | 640 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0618050 | Msa1035290 | 0.814937 | 1.194677e-51 | -8.615850e-47 |
| Msa0618600 | Msa1035290 | 0.855448 | 6.266752e-62 | -8.615850e-47 |
| Msa0643240 | Msa1035290 | 0.825328 | 4.977482e-54 | -8.615850e-47 |
| Msa0657380 | Msa1035290 | 0.847088 | 1.442963e-59 | -8.615850e-47 |
| Msa0682920 | Msa1035290 | 0.803635 | 3.172444e-49 | -8.615850e-47 |
| Msa0708510 | Msa1035290 | 0.878636 | 2.392015e-69 | -8.615850e-47 |
| Msa0221820 | Msa1035290 | 0.833502 | 5.141414e-56 | -8.615850e-47 |
| Msa1035290 | Msa1075380 | 0.914748 | 1.331547e-84 | -8.615850e-47 |
| Msa1035290 | Msa1116460 | 0.917218 | 6.936155e-86 | -8.615850e-47 |
| Msa1035290 | Msa1162860 | 0.860344 | 2.205388e-63 | -8.615850e-47 |
| Msa1035290 | Msa1199250 | 0.860926 | 1.468689e-63 | -8.615850e-47 |
| Msa1035290 | Msa1252480 | 0.819297 | 1.250902e-52 | -8.615850e-47 |
| Msa1035290 | Msa1293220 | 0.826173 | 3.136444e-54 | -8.615850e-47 |
| Msa1035290 | Msa1421310 | 0.840357 | 9.130387e-58 | -8.615850e-47 |
| Msa0250450 | Msa1035290 | 0.841960 | 3.460118e-58 | -8.615850e-47 |
| Msa0263440 | Msa1035290 | 0.900416 | 7.487490e-78 | -8.615850e-47 |
| Msa0301030 | Msa1035290 | 0.897846 | 9.459786e-77 | -8.615850e-47 |
| Msa0314220 | Msa1035290 | 0.804784 | 1.829560e-49 | -8.615850e-47 |
| Msa0327020 | Msa1035290 | 0.806624 | 7.514658e-50 | -8.615850e-47 |
| Msa0338580 | Msa1035290 | 0.885646 | 6.792429e-72 | -8.615850e-47 |
| Msa0485970 | Msa1035290 | 0.820429 | 6.892488e-53 | -8.615850e-47 |
| Msa0547390 | Msa1035290 | 0.836749 | 7.796844e-57 | -8.615850e-47 |
| Msa0565260 | Msa1035290 | 0.814080 | 1.848118e-51 | -8.615850e-47 |
| Msa0580580 | Msa1035290 | 0.801669 | 8.073292e-49 | -8.615850e-47 |
| Msa0602110 | Msa1035290 | 0.811266 | 7.628404e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035290 | MtrunA17_Chr7g0258811 | 95.441 | 329 | 15 | 0 | 1 | 329 | 45 | 373 | 0.0 | 640 |
| Msa1035290 | MtrunA17_Chr1g0175561 | 76.292 | 329 | 77 | 1 | 1 | 329 | 1 | 328 | 0.0 | 511 |
| Msa1035290 | MtrunA17_Chr2g0292211 | 62.338 | 308 | 115 | 1 | 20 | 327 | 35 | 341 | 4.83e-136 | 390 |
| Msa1035290 | MtrunA17_Chr2g0292251 | 61.238 | 307 | 118 | 1 | 21 | 327 | 24 | 329 | 2.84e-132 | 380 |
| Msa1035290 | MtrunA17_Chr2g0292241 | 59.609 | 307 | 123 | 1 | 21 | 327 | 25 | 330 | 3.74e-132 | 380 |
| Msa1035290 | MtrunA17_Chr2g0292271 | 61.039 | 308 | 119 | 1 | 21 | 328 | 25 | 331 | 2.21e-130 | 375 |
| Msa1035290 | MtrunA17_Chr2g0292181 | 56.707 | 328 | 139 | 2 | 2 | 327 | 13 | 339 | 4.85e-130 | 375 |
| Msa1035290 | MtrunA17_Chr2g0291751 | 58.204 | 323 | 134 | 1 | 5 | 327 | 9 | 330 | 1.12e-127 | 369 |
| Msa1035290 | MtrunA17_Chr2g0292261 | 57.447 | 329 | 137 | 2 | 2 | 328 | 4 | 331 | 1.19e-127 | 369 |
| Msa1035290 | MtrunA17_Chr2g0292091 | 57.827 | 313 | 131 | 1 | 16 | 328 | 15 | 326 | 3.11e-126 | 365 |
| Msa1035290 | MtrunA17_Chr2g0292151 | 58.632 | 307 | 126 | 1 | 21 | 327 | 25 | 330 | 8.12e-126 | 364 |
| Msa1035290 | MtrunA17_Chr4g0070951 | 55.488 | 328 | 141 | 2 | 2 | 327 | 5 | 329 | 1.03e-124 | 360 |
| Msa1035290 | MtrunA17_Chr2g0292111 | 57.329 | 307 | 130 | 1 | 21 | 327 | 25 | 330 | 3.32e-124 | 360 |
| Msa1035290 | MtrunA17_Chr2g0299691 | 54.321 | 324 | 142 | 2 | 7 | 327 | 38 | 358 | 1.00e-122 | 356 |
| Msa1035290 | MtrunA17_Chr2g0292291 | 55.927 | 329 | 141 | 3 | 2 | 327 | 5 | 332 | 8.93e-122 | 354 |
| Msa1035290 | MtrunA17_Chr2g0292101 | 56.550 | 313 | 135 | 1 | 16 | 328 | 16 | 327 | 4.17e-120 | 349 |
| Msa1035290 | MtrunA17_Chr3g0129051 | 55.077 | 325 | 132 | 6 | 5 | 327 | 10 | 322 | 1.38e-119 | 347 |
| Msa1035290 | MtrunA17_Chr3g0129061 | 55.763 | 321 | 130 | 5 | 9 | 327 | 12 | 322 | 1.79e-115 | 337 |
| Msa1035290 | MtrunA17_Chr5g0404721 | 53.135 | 303 | 140 | 2 | 25 | 327 | 30 | 330 | 6.12e-114 | 333 |
| Msa1035290 | MtrunA17_Chr3g0129041 | 55.140 | 321 | 132 | 5 | 9 | 327 | 12 | 322 | 2.13e-112 | 329 |
| Msa1035290 | MtrunA17_Chr5g0402571 | 52.500 | 320 | 147 | 4 | 9 | 327 | 11 | 326 | 1.50e-110 | 324 |
| Msa1035290 | MtrunA17_Chr8g0372601 | 52.475 | 303 | 142 | 2 | 25 | 327 | 30 | 330 | 7.95e-110 | 323 |
| Msa1035290 | MtrunA17_Chr3g0106921 | 50.915 | 328 | 147 | 7 | 3 | 327 | 4 | 320 | 2.21e-107 | 316 |
| Msa1035290 | MtrunA17_Chr5g0402581 | 50.938 | 320 | 152 | 4 | 9 | 327 | 11 | 326 | 3.47e-107 | 316 |
| Msa1035290 | MtrunA17_Chr5g0438021 | 49.062 | 320 | 151 | 5 | 10 | 327 | 16 | 325 | 1.21e-106 | 314 |
| Msa1035290 | MtrunA17_Chr3g0114451 | 51.645 | 304 | 137 | 3 | 24 | 327 | 25 | 318 | 2.83e-106 | 313 |
| Msa1035290 | MtrunA17_Chr2g0320071 | 49.231 | 325 | 153 | 4 | 5 | 327 | 3 | 317 | 4.01e-106 | 313 |
| Msa1035290 | MtrunA17_Chr2g0320061 | 48.615 | 325 | 156 | 4 | 5 | 327 | 3 | 318 | 4.14e-103 | 305 |
| Msa1035290 | MtrunA17_Chr2g0320031 | 47.678 | 323 | 158 | 4 | 6 | 327 | 7 | 319 | 1.53e-102 | 303 |
| Msa1035290 | MtrunA17_Chr4g0038171 | 49.536 | 323 | 148 | 5 | 10 | 327 | 9 | 321 | 1.60e-102 | 303 |
| Msa1035290 | MtrunA17_Chr2g0320101 | 49.387 | 326 | 151 | 5 | 5 | 327 | 3 | 317 | 1.96e-102 | 303 |
| Msa1035290 | MtrunA17_Chr2g0320051 | 48.923 | 325 | 155 | 4 | 5 | 327 | 3 | 318 | 2.61e-102 | 303 |
| Msa1035290 | MtrunA17_Chr4g0043391 | 48.598 | 321 | 154 | 4 | 10 | 327 | 12 | 324 | 3.17e-102 | 303 |
| Msa1035290 | MtrunA17_Chr4g0013171 | 48.036 | 331 | 158 | 6 | 1 | 327 | 1 | 321 | 5.53e-102 | 302 |
| Msa1035290 | MtrunA17_Chr5g0432441 | 47.988 | 323 | 152 | 6 | 10 | 327 | 15 | 326 | 4.47e-101 | 300 |
| Msa1035290 | MtrunA17_Chr4g0038151 | 48.758 | 322 | 152 | 5 | 10 | 327 | 9 | 321 | 6.50e-100 | 297 |
| Msa1035290 | MtrunA17_Chr7g0244461 | 45.768 | 319 | 163 | 3 | 9 | 327 | 4 | 312 | 1.20e-99 | 296 |
| Msa1035290 | MtrunA17_Chr4g0038161 | 48.598 | 321 | 153 | 4 | 10 | 327 | 9 | 320 | 1.30e-99 | 296 |
| Msa1035290 | MtrunA17_Chr2g0320091 | 48.160 | 326 | 156 | 5 | 5 | 327 | 3 | 318 | 1.57e-99 | 296 |
| Msa1035290 | MtrunA17_Chr4g0013201 | 46.372 | 317 | 160 | 3 | 11 | 327 | 32 | 338 | 9.46e-97 | 290 |
| Msa1035290 | MtrunA17_Chr1g0155611 | 47.855 | 303 | 157 | 1 | 25 | 327 | 46 | 347 | 2.17e-96 | 289 |
| Msa1035290 | MtrunA17_Chr5g0400331 | 48.534 | 307 | 153 | 3 | 25 | 327 | 26 | 331 | 5.89e-96 | 287 |
| Msa1035290 | MtrunA17_Chr1g0213061 | 45.062 | 324 | 165 | 6 | 6 | 327 | 9 | 321 | 4.18e-95 | 285 |
| Msa1035290 | MtrunA17_Chr5g0432341 | 45.679 | 324 | 164 | 5 | 7 | 327 | 7 | 321 | 5.32e-95 | 285 |
| Msa1035290 | MtrunA17_Chr5g0432351 | 45.370 | 324 | 165 | 5 | 7 | 327 | 7 | 321 | 5.93e-95 | 284 |
| Msa1035290 | MtrunA17_Chr7g0244451 | 46.835 | 316 | 158 | 3 | 12 | 327 | 11 | 316 | 2.20e-93 | 280 |
| Msa1035290 | MtrunA17_Chr5g0432331 | 45.171 | 321 | 164 | 5 | 10 | 327 | 41 | 352 | 2.59e-93 | 281 |
| Msa1035290 | MtrunA17_Chr4g0013721 | 45.928 | 307 | 160 | 4 | 21 | 327 | 96 | 396 | 1.33e-92 | 281 |
| Msa1035290 | MtrunA17_Chr4g0068621 | 46.205 | 303 | 159 | 3 | 25 | 327 | 38 | 336 | 1.73e-92 | 278 |
| Msa1035290 | MtrunA17_Chr4g0013821 | 43.653 | 323 | 171 | 5 | 11 | 328 | 9 | 325 | 2.02e-92 | 279 |
| Msa1035290 | MtrunA17_Chr4g0013181 | 47.841 | 301 | 145 | 5 | 29 | 327 | 63 | 353 | 2.59e-92 | 279 |
| Msa1035290 | MtrunA17_Chr3g0106901 | 46.082 | 319 | 162 | 3 | 9 | 327 | 15 | 323 | 5.59e-92 | 277 |
| Msa1035290 | MtrunA17_Chr4g0024121 | 42.073 | 328 | 185 | 4 | 1 | 327 | 3 | 326 | 5.28e-90 | 272 |
| Msa1035290 | MtrunA17_Chr2g0322861 | 44.860 | 321 | 169 | 6 | 10 | 327 | 71 | 386 | 2.33e-89 | 272 |
| Msa1035290 | MtrunA17_Chr3g0107881 | 44.308 | 325 | 170 | 4 | 6 | 327 | 8 | 324 | 2.50e-89 | 270 |
| Msa1035290 | MtrunA17_Chr3g0128061 | 42.462 | 325 | 177 | 4 | 7 | 327 | 8 | 326 | 9.78e-88 | 266 |
| Msa1035290 | MtrunA17_Chr4g0063671 | 45.342 | 322 | 160 | 7 | 13 | 327 | 8 | 320 | 2.11e-87 | 265 |
| Msa1035290 | MtrunA17_Chr4g0013191 | 44.872 | 312 | 164 | 4 | 16 | 327 | 37 | 340 | 1.41e-86 | 264 |
| Msa1035290 | MtrunA17_Chr7g0268501 | 43.344 | 323 | 175 | 6 | 6 | 327 | 5 | 320 | 2.84e-84 | 257 |
| Msa1035290 | MtrunA17_Chr7g0268521 | 43.344 | 323 | 175 | 6 | 6 | 327 | 5 | 320 | 2.84e-84 | 257 |
| Msa1035290 | MtrunA17_Chr6g0477071 | 44.300 | 307 | 153 | 8 | 23 | 327 | 52 | 342 | 5.73e-84 | 257 |
| Msa1035290 | MtrunA17_Chr7g0254201 | 43.607 | 305 | 162 | 6 | 23 | 327 | 18 | 312 | 7.10e-84 | 256 |
| Msa1035290 | MtrunA17_Chr5g0405991 | 43.218 | 317 | 169 | 8 | 12 | 327 | 10 | 316 | 1.05e-82 | 253 |
| Msa1035290 | MtrunA17_Chr2g0279041 | 42.643 | 333 | 177 | 7 | 1 | 327 | 1 | 325 | 1.88e-81 | 250 |
| Msa1035290 | MtrunA17_Chr6g0460711 | 42.812 | 320 | 173 | 8 | 9 | 327 | 4 | 314 | 3.74e-80 | 246 |
| Msa1035290 | MtrunA17_Chr7g0224371 | 41.176 | 323 | 178 | 5 | 7 | 328 | 12 | 323 | 4.10e-80 | 246 |
| Msa1035290 | MtrunA17_Chr1g0204011 | 40.615 | 325 | 179 | 7 | 4 | 327 | 11 | 322 | 4.11e-80 | 246 |
| Msa1035290 | MtrunA17_Chr1g0148021 | 41.994 | 331 | 185 | 5 | 1 | 327 | 1 | 328 | 5.10e-80 | 246 |
| Msa1035290 | MtrunA17_Chr8g0371381 | 43.750 | 304 | 160 | 8 | 25 | 327 | 26 | 319 | 6.51e-80 | 246 |
| Msa1035290 | MtrunA17_Chr2g0329641 | 41.100 | 309 | 169 | 6 | 24 | 327 | 35 | 335 | 3.06e-79 | 244 |
| Msa1035290 | MtrunA17_Chr1g0188431 | 40.557 | 323 | 178 | 6 | 5 | 327 | 19 | 327 | 7.17e-79 | 243 |
| Msa1035290 | MtrunA17_Chr5g0421411 | 42.160 | 287 | 160 | 6 | 45 | 327 | 1 | 285 | 1.01e-76 | 236 |
| Msa1035290 | MtrunA17_Chr1g0157051 | 41.772 | 316 | 174 | 7 | 9 | 323 | 8 | 314 | 1.49e-76 | 237 |
| Msa1035290 | MtrunA17_Chr4g0072091 | 43.182 | 308 | 164 | 4 | 24 | 327 | 23 | 323 | 3.69e-76 | 236 |
| Msa1035290 | MtrunA17_Chr4g0076211 | 42.140 | 299 | 161 | 6 | 30 | 327 | 46 | 333 | 7.08e-76 | 236 |
| Msa1035290 | MtrunA17_Chr2g0296621 | 41.830 | 306 | 163 | 9 | 25 | 328 | 50 | 342 | 8.42e-76 | 236 |
| Msa1035290 | MtrunA17_Chr7g0225221 | 41.195 | 318 | 176 | 5 | 12 | 327 | 12 | 320 | 1.62e-75 | 234 |
| Msa1035290 | MtrunA17_Chr6g0467161 | 39.583 | 336 | 180 | 8 | 2 | 327 | 14 | 336 | 5.42e-75 | 234 |
| Msa1035290 | MtrunA17_Chr1g0194151 | 40.541 | 333 | 184 | 7 | 6 | 327 | 4 | 333 | 1.84e-74 | 232 |
| Msa1035290 | MtrunA17_Chr2g0316791 | 39.583 | 336 | 163 | 7 | 25 | 326 | 76 | 405 | 3.22e-74 | 234 |
| Msa1035290 | MtrunA17_Chr2g0316481 | 39.039 | 333 | 169 | 6 | 25 | 326 | 76 | 405 | 3.22e-74 | 234 |
| Msa1035290 | MtrunA17_Chr5g0432401 | 40.923 | 325 | 141 | 6 | 6 | 327 | 10 | 286 | 5.21e-74 | 229 |
| Msa1035290 | MtrunA17_Chr4g0046131 | 38.235 | 340 | 188 | 7 | 3 | 323 | 6 | 342 | 9.77e-74 | 231 |
| Msa1035290 | MtrunA17_Chr2g0311251 | 39.640 | 333 | 166 | 7 | 25 | 326 | 11 | 339 | 6.40e-73 | 229 |
| Msa1035290 | MtrunA17_Chr2g0316831 | 39.039 | 333 | 169 | 6 | 25 | 326 | 112 | 441 | 8.13e-73 | 231 |
| Msa1035290 | MtrunA17_Chr1g0194271 | 39.706 | 340 | 184 | 8 | 6 | 327 | 4 | 340 | 1.69e-72 | 228 |
| Msa1035290 | MtrunA17_Chr5g0401431 | 39.062 | 320 | 187 | 5 | 8 | 323 | 10 | 325 | 3.30e-72 | 226 |
| Msa1035290 | MtrunA17_Chr2g0316191 | 38.623 | 334 | 170 | 6 | 25 | 326 | 76 | 406 | 5.18e-72 | 228 |
| Msa1035290 | MtrunA17_Chr4g0053871 | 41.121 | 321 | 174 | 7 | 9 | 323 | 9 | 320 | 1.22e-71 | 225 |
| Msa1035290 | MtrunA17_Chr2g0292281 | 56.190 | 210 | 82 | 2 | 118 | 327 | 17 | 216 | 3.77e-71 | 221 |
| Msa1035290 | MtrunA17_Chr7g0254231 | 39.869 | 306 | 169 | 7 | 23 | 327 | 20 | 311 | 1.16e-70 | 222 |
| Msa1035290 | MtrunA17_Chr1g0197411 | 36.890 | 328 | 203 | 3 | 2 | 327 | 5 | 330 | 2.16e-70 | 222 |
| Msa1035290 | MtrunA17_Chr1g0164891 | 39.934 | 303 | 175 | 5 | 29 | 327 | 93 | 392 | 4.16e-70 | 223 |
| Msa1035290 | MtrunA17_Chr6g0467121 | 40.413 | 339 | 171 | 10 | 5 | 328 | 42 | 364 | 1.21e-69 | 221 |
| Msa1035290 | MtrunA17_Chr2g0311241 | 35.714 | 378 | 165 | 8 | 25 | 329 | 60 | 432 | 8.61e-68 | 218 |
| Msa1035290 | MtrunA17_Chr2g0279061 | 45.627 | 263 | 131 | 5 | 69 | 327 | 12 | 266 | 2.06e-67 | 212 |
| Msa1035290 | MtrunA17_Chr2g0278671 | 39.048 | 315 | 179 | 7 | 18 | 327 | 17 | 323 | 2.40e-67 | 214 |
| Msa1035290 | MtrunA17_Chr8g0364291 | 37.695 | 321 | 195 | 4 | 9 | 327 | 7 | 324 | 8.46e-67 | 213 |
| Msa1035290 | MtrunA17_Chr5g0413051 | 36.859 | 312 | 189 | 5 | 21 | 327 | 69 | 377 | 7.10e-65 | 209 |
| Msa1035290 | MtrunA17_Chr3g0136751 | 38.509 | 322 | 187 | 5 | 9 | 327 | 9 | 322 | 2.23e-63 | 204 |
| Msa1035290 | MtrunA17_Chr1g0181511 | 36.570 | 309 | 184 | 6 | 23 | 328 | 25 | 324 | 1.02e-61 | 199 |
| Msa1035290 | MtrunA17_Chr6g0451571 | 36.593 | 317 | 193 | 5 | 14 | 327 | 23 | 334 | 4.22e-61 | 198 |
| Msa1035290 | MtrunA17_Chr6g0467251 | 38.762 | 307 | 172 | 8 | 20 | 323 | 31 | 324 | 3.16e-60 | 196 |
| Msa1035290 | MtrunA17_Chr1g0181431 | 35.599 | 309 | 187 | 6 | 23 | 328 | 25 | 324 | 3.26e-58 | 190 |
| Msa1035290 | MtrunA17_Chr1g0181481 | 35.922 | 309 | 186 | 6 | 23 | 328 | 25 | 324 | 1.48e-57 | 189 |
| Msa1035290 | MtrunA17_Chr4g0075241 | 35.082 | 305 | 192 | 4 | 24 | 327 | 28 | 327 | 4.14e-57 | 187 |
| Msa1035290 | MtrunA17_Chr4g0074851 | 34.653 | 303 | 184 | 6 | 25 | 323 | 32 | 324 | 2.36e-55 | 183 |
| Msa1035290 | MtrunA17_Chr3g0114461 | 46.073 | 191 | 95 | 2 | 137 | 327 | 10 | 192 | 1.54e-53 | 174 |
| Msa1035290 | MtrunA17_Chr2g0316811 | 37.324 | 284 | 131 | 5 | 25 | 262 | 50 | 332 | 1.79e-53 | 178 |
| Msa1035290 | MtrunA17_Chr4g0004591 | 31.056 | 322 | 159 | 4 | 25 | 326 | 77 | 355 | 3.32e-49 | 168 |
| Msa1035290 | MtrunA17_Chr2g0316141 | 35.069 | 288 | 134 | 8 | 71 | 326 | 11 | 277 | 8.28e-47 | 159 |
| Msa1035290 | MtrunA17_Chr2g0316181 | 35.069 | 288 | 134 | 8 | 71 | 326 | 11 | 277 | 8.28e-47 | 159 |
| Msa1035290 | MtrunA17_Chr3g0114491 | 60.909 | 110 | 42 | 1 | 24 | 133 | 17 | 125 | 2.99e-39 | 135 |
| Msa1035290 | MtrunA17_Chr1g0181501 | 33.846 | 195 | 118 | 5 | 137 | 328 | 4 | 190 | 3.53e-29 | 110 |
| Msa1035290 | MtrunA17_Chr2g0316771 | 30.168 | 179 | 91 | 4 | 176 | 323 | 7 | 182 | 5.33e-23 | 94.4 |
| Msa1035290 | MtrunA17_Chr5g0432321 | 38.710 | 124 | 68 | 2 | 147 | 270 | 17 | 132 | 6.18e-22 | 89.7 |
| Msa1035290 | MtrunA17_Chr3g0104101 | 36.620 | 142 | 85 | 5 | 190 | 327 | 9 | 149 | 6.70e-21 | 87.4 |
| Msa1035290 | MtrunA17_Chr7g0254181 | 42.424 | 99 | 54 | 1 | 94 | 192 | 27 | 122 | 1.18e-19 | 84.3 |
| Msa1035290 | MtrunA17_Chr1g0181491 | 39.823 | 113 | 65 | 3 | 23 | 135 | 10 | 119 | 1.16e-18 | 81.3 |
| Msa1035290 | MtrunA17_Chr6g0468731 | 56.944 | 72 | 26 | 2 | 64 | 135 | 22 | 88 | 1.71e-18 | 79.3 |
| Msa1035290 | MtrunA17_Chr5g0432361 | 40.860 | 93 | 54 | 1 | 234 | 326 | 17 | 108 | 8.68e-18 | 77.8 |
| Msa1035290 | MtrunA17_Chr4g0013811 | 41.892 | 74 | 43 | 0 | 136 | 209 | 5 | 78 | 1.64e-14 | 67.8 |
| Msa1035290 | MtrunA17_Chr7g0254171 | 34.783 | 138 | 82 | 4 | 71 | 205 | 4 | 136 | 1.11e-13 | 67.4 |
| Msa1035290 | MtrunA17_Chr3g0137751 | 26.667 | 255 | 136 | 8 | 57 | 308 | 106 | 312 | 1.83e-13 | 70.1 |
| Msa1035290 | MtrunA17_Chr7g0268491 | 45.238 | 84 | 43 | 2 | 244 | 327 | 17 | 97 | 1.92e-13 | 65.5 |
| Msa1035290 | MtrunA17_Chr1g0196191 | 52.632 | 76 | 32 | 3 | 59 | 134 | 21 | 92 | 1.99e-13 | 67.0 |
| Msa1035290 | MtrunA17_Chr3g0124821 | 27.500 | 200 | 111 | 7 | 119 | 309 | 180 | 354 | 5.83e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035290 | AT5G06720.1 | 70.606 | 330 | 92 | 2 | 4 | 329 | 7 | 335 | 1.07e-167 | 470 |
| Msa1035290 | AT5G06730.1 | 67.901 | 324 | 101 | 2 | 7 | 328 | 13 | 335 | 3.10e-158 | 447 |
| Msa1035290 | AT2G38380.1 | 56.024 | 332 | 139 | 5 | 2 | 327 | 3 | 333 | 6.26e-125 | 362 |
| Msa1035290 | AT2G38390.1 | 55.844 | 308 | 134 | 2 | 21 | 327 | 27 | 333 | 1.08e-123 | 359 |
| Msa1035290 | AT5G19880.1 | 56.311 | 309 | 133 | 2 | 21 | 327 | 21 | 329 | 3.95e-123 | 357 |
| Msa1035290 | AT4G08780.1 | 55.340 | 309 | 135 | 3 | 21 | 327 | 20 | 327 | 1.88e-122 | 355 |
| Msa1035290 | AT3G32980.1 | 55.255 | 333 | 141 | 5 | 2 | 327 | 3 | 334 | 8.14e-122 | 354 |
| Msa1035290 | AT4G08770.1 | 55.340 | 309 | 135 | 3 | 21 | 327 | 20 | 327 | 1.07e-120 | 351 |
| Msa1035290 | AT3G49110.1 | 54.462 | 325 | 140 | 4 | 10 | 327 | 13 | 336 | 1.30e-118 | 346 |
| Msa1035290 | AT3G49120.1 | 54.154 | 325 | 144 | 4 | 7 | 327 | 12 | 335 | 2.19e-118 | 345 |
| Msa1035290 | AT5G19890.1 | 54.103 | 329 | 140 | 5 | 1 | 327 | 8 | 327 | 3.28e-118 | 344 |
| Msa1035290 | AT5G66390.1 | 52.769 | 307 | 143 | 2 | 21 | 327 | 29 | 333 | 6.12e-115 | 336 |
| Msa1035290 | AT2G18150.1 | 53.821 | 301 | 137 | 2 | 29 | 329 | 40 | 338 | 6.90e-114 | 333 |
| Msa1035290 | AT4G36430.1 | 53.115 | 305 | 141 | 2 | 23 | 327 | 28 | 330 | 3.06e-113 | 332 |
| Msa1035290 | AT2G18140.1 | 53.156 | 301 | 139 | 2 | 29 | 329 | 39 | 337 | 5.78e-113 | 331 |
| Msa1035290 | AT3G50990.1 | 51.466 | 307 | 147 | 2 | 21 | 327 | 37 | 341 | 1.53e-110 | 325 |
| Msa1035290 | AT5G05340.1 | 52.273 | 308 | 135 | 5 | 22 | 327 | 27 | 324 | 6.49e-107 | 315 |
| Msa1035290 | AT1G44970.1 | 50.654 | 306 | 150 | 1 | 22 | 327 | 42 | 346 | 1.60e-102 | 305 |
| Msa1035290 | AT1G49570.1 | 49.669 | 302 | 146 | 4 | 25 | 323 | 48 | 346 | 2.41e-100 | 300 |
| Msa1035290 | AT2G35380.1 | 51.140 | 307 | 145 | 4 | 25 | 327 | 30 | 335 | 3.06e-99 | 296 |
| Msa1035290 | AT5G58390.1 | 49.068 | 322 | 151 | 6 | 9 | 327 | 5 | 316 | 9.99e-98 | 291 |
| Msa1035290 | AT1G14550.1 | 45.963 | 322 | 165 | 4 | 7 | 327 | 8 | 321 | 1.01e-97 | 292 |
| Msa1035290 | AT5G58400.1 | 47.205 | 322 | 157 | 6 | 9 | 327 | 14 | 325 | 3.95e-95 | 285 |
| Msa1035290 | AT1G14540.1 | 45.652 | 322 | 165 | 4 | 8 | 327 | 2 | 315 | 6.92e-94 | 282 |
| Msa1035290 | AT2G22420.1 | 43.887 | 319 | 173 | 4 | 9 | 327 | 7 | 319 | 8.37e-93 | 280 |
| Msa1035290 | AT5G17820.1 | 44.340 | 318 | 163 | 6 | 11 | 327 | 9 | 313 | 2.02e-91 | 275 |
| Msa1035290 | AT5G17820.2 | 44.340 | 318 | 163 | 6 | 11 | 327 | 62 | 366 | 3.72e-90 | 274 |
| Msa1035290 | AT1G68850.1 | 44.481 | 308 | 164 | 7 | 25 | 327 | 30 | 335 | 7.46e-90 | 272 |
| Msa1035290 | AT3G03670.1 | 45.938 | 320 | 167 | 4 | 10 | 327 | 6 | 321 | 1.30e-89 | 271 |
| Msa1035290 | AT3G21770.1 | 44.409 | 313 | 165 | 6 | 14 | 323 | 18 | 324 | 7.50e-88 | 267 |
| Msa1035290 | AT4G16270.1 | 45.667 | 300 | 157 | 5 | 29 | 327 | 54 | 348 | 1.13e-87 | 267 |
| Msa1035290 | AT5G64120.1 | 47.157 | 299 | 149 | 6 | 29 | 327 | 39 | 328 | 5.29e-87 | 265 |
| Msa1035290 | AT2G18980.1 | 44.308 | 325 | 169 | 5 | 7 | 327 | 7 | 323 | 4.52e-86 | 262 |
| Msa1035290 | AT2G41480.1 | 43.119 | 327 | 172 | 7 | 7 | 327 | 10 | 328 | 1.07e-84 | 259 |
| Msa1035290 | AT4G11290.1 | 43.034 | 323 | 178 | 5 | 8 | 327 | 7 | 326 | 2.26e-84 | 258 |
| Msa1035290 | AT1G05260.1 | 42.453 | 318 | 174 | 6 | 13 | 327 | 14 | 325 | 2.63e-84 | 258 |
| Msa1035290 | AT5G39580.1 | 46.584 | 322 | 159 | 9 | 10 | 327 | 7 | 319 | 1.64e-83 | 255 |
| Msa1035290 | AT4G30170.1 | 43.689 | 309 | 162 | 5 | 23 | 327 | 25 | 325 | 2.76e-82 | 253 |
| Msa1035290 | AT3G01190.1 | 41.325 | 317 | 178 | 6 | 12 | 327 | 12 | 321 | 6.57e-81 | 249 |
| Msa1035290 | AT5G15180.1 | 39.319 | 323 | 187 | 6 | 9 | 327 | 12 | 329 | 4.76e-80 | 247 |
| Msa1035290 | AT4G25980.1 | 41.562 | 320 | 175 | 5 | 13 | 327 | 14 | 326 | 9.36e-80 | 246 |
| Msa1035290 | AT5G42180.1 | 42.089 | 316 | 173 | 7 | 12 | 326 | 10 | 316 | 2.24e-79 | 245 |
| Msa1035290 | AT4G37530.1 | 43.770 | 313 | 170 | 4 | 18 | 327 | 20 | 329 | 3.72e-79 | 244 |
| Msa1035290 | AT5G51890.1 | 40.741 | 324 | 180 | 8 | 6 | 327 | 9 | 322 | 3.83e-78 | 242 |
| Msa1035290 | AT3G49960.1 | 43.354 | 316 | 171 | 6 | 12 | 323 | 14 | 325 | 1.75e-77 | 240 |
| Msa1035290 | AT1G77100.1 | 42.462 | 325 | 172 | 6 | 8 | 327 | 5 | 319 | 2.37e-77 | 239 |
| Msa1035290 | AT5G14130.1 | 40.000 | 325 | 189 | 4 | 4 | 327 | 11 | 330 | 4.74e-77 | 239 |
| Msa1035290 | AT5G14130.2 | 40.000 | 325 | 189 | 4 | 4 | 327 | 52 | 371 | 1.24e-76 | 239 |
| Msa1035290 | AT2G39040.1 | 42.308 | 312 | 170 | 6 | 22 | 327 | 43 | 350 | 1.31e-75 | 236 |
| Msa1035290 | AT4G37520.1 | 41.776 | 304 | 171 | 4 | 23 | 323 | 25 | 325 | 1.88e-75 | 235 |
| Msa1035290 | AT1G71695.1 | 42.581 | 310 | 167 | 6 | 20 | 327 | 39 | 339 | 3.89e-75 | 235 |
| Msa1035290 | AT4G33420.1 | 40.994 | 322 | 170 | 8 | 12 | 327 | 18 | 325 | 8.43e-75 | 233 |
| Msa1035290 | AT4G33420.2 | 40.994 | 322 | 170 | 8 | 12 | 327 | 65 | 372 | 5.48e-74 | 233 |
| Msa1035290 | AT1G05240.1 | 39.799 | 299 | 169 | 5 | 29 | 323 | 30 | 321 | 6.57e-74 | 231 |
| Msa1035290 | AT1G05250.1 | 39.799 | 299 | 169 | 5 | 29 | 323 | 30 | 321 | 6.57e-74 | 231 |
| Msa1035290 | AT2G43480.1 | 39.185 | 319 | 178 | 8 | 16 | 327 | 26 | 335 | 6.76e-74 | 231 |
| Msa1035290 | AT5G64110.1 | 41.033 | 329 | 177 | 7 | 7 | 327 | 11 | 330 | 1.14e-73 | 231 |
| Msa1035290 | AT2G35380.2 | 50.813 | 246 | 117 | 3 | 86 | 327 | 2 | 247 | 2.31e-73 | 227 |
| Msa1035290 | AT4G37520.2 | 41.118 | 304 | 170 | 5 | 23 | 323 | 25 | 322 | 9.77e-73 | 228 |
| Msa1035290 | AT5G64100.1 | 41.667 | 300 | 165 | 6 | 29 | 327 | 41 | 331 | 2.63e-72 | 227 |
| Msa1035290 | AT5G67400.1 | 40.673 | 327 | 184 | 8 | 2 | 323 | 4 | 325 | 4.03e-72 | 226 |
| Msa1035290 | AT4G33870.1 | 36.283 | 339 | 177 | 5 | 22 | 325 | 65 | 399 | 1.03e-71 | 228 |
| Msa1035290 | AT5G24070.1 | 39.937 | 318 | 174 | 9 | 18 | 328 | 29 | 336 | 1.35e-71 | 226 |
| Msa1035290 | AT2G34060.1 | 38.436 | 307 | 183 | 5 | 22 | 324 | 39 | 343 | 1.51e-71 | 226 |
| Msa1035290 | AT4G37530.2 | 45.977 | 261 | 137 | 3 | 18 | 275 | 20 | 279 | 1.18e-70 | 221 |
| Msa1035290 | AT4G17690.1 | 38.487 | 304 | 179 | 3 | 25 | 327 | 26 | 322 | 5.96e-68 | 216 |
| Msa1035290 | AT1G34510.1 | 38.170 | 317 | 178 | 7 | 13 | 327 | 9 | 309 | 7.61e-68 | 215 |
| Msa1035290 | AT4G26010.1 | 39.375 | 320 | 170 | 9 | 13 | 327 | 9 | 309 | 1.18e-67 | 214 |
| Msa1035290 | AT4G26010.2 | 39.375 | 320 | 170 | 9 | 13 | 327 | 37 | 337 | 2.13e-67 | 215 |
| Msa1035290 | AT1G30870.1 | 39.286 | 308 | 169 | 9 | 25 | 327 | 51 | 345 | 3.57e-67 | 214 |
| Msa1035290 | AT5G47000.1 | 35.366 | 328 | 203 | 5 | 2 | 327 | 10 | 330 | 7.78e-67 | 213 |
| Msa1035290 | AT5G22410.1 | 39.875 | 321 | 175 | 11 | 12 | 324 | 12 | 322 | 4.55e-66 | 211 |
| Msa1035290 | AT4G31760.1 | 39.198 | 324 | 182 | 6 | 11 | 327 | 11 | 326 | 6.20e-66 | 211 |
| Msa1035290 | AT2G24800.1 | 38.835 | 309 | 177 | 5 | 23 | 327 | 29 | 329 | 3.51e-65 | 209 |
| Msa1035290 | AT1G24110.1 | 36.364 | 319 | 195 | 6 | 13 | 327 | 8 | 322 | 4.45e-63 | 203 |
| Msa1035290 | AT3G28200.1 | 34.194 | 310 | 191 | 4 | 21 | 327 | 17 | 316 | 1.06e-61 | 199 |
| Msa1035290 | AT4G21960.1 | 36.304 | 303 | 179 | 6 | 25 | 323 | 31 | 323 | 3.38e-60 | 196 |
| Msa1035290 | AT5G40150.1 | 35.390 | 308 | 191 | 3 | 21 | 327 | 28 | 328 | 1.74e-59 | 194 |
| Msa1035290 | AT2G37130.1 | 33.442 | 308 | 192 | 5 | 24 | 327 | 29 | 327 | 2.46e-54 | 181 |
| Msa1035290 | AT2G37130.2 | 33.663 | 303 | 188 | 5 | 29 | 327 | 3 | 296 | 4.51e-54 | 179 |
| Msa1035290 | AT3G17070.1 | 33.856 | 319 | 178 | 8 | 25 | 327 | 38 | 339 | 1.38e-49 | 169 |
| Msa1035290 | AT4G25980.2 | 45.902 | 183 | 94 | 3 | 13 | 195 | 59 | 236 | 5.25e-48 | 163 |
| Msa1035290 | AT5G39580.2 | 47.449 | 196 | 94 | 6 | 10 | 202 | 7 | 196 | 4.18e-46 | 156 |
| Msa1035290 | AT2G24800.2 | 40.462 | 173 | 98 | 1 | 23 | 195 | 29 | 196 | 7.53e-36 | 130 |
| Msa1035290 | AT3G17070.2 | 31.271 | 291 | 166 | 9 | 53 | 327 | 4 | 276 | 1.77e-34 | 127 |
| Msa1035290 | AT3G42570.1 | 34.513 | 113 | 72 | 2 | 82 | 193 | 38 | 149 | 1.00e-13 | 68.2 |
| Msa1035290 | AT1G77490.2 | 26.515 | 264 | 151 | 11 | 59 | 309 | 106 | 339 | 1.13e-13 | 71.6 |
| Msa1035290 | AT1G77490.1 | 26.515 | 264 | 151 | 11 | 59 | 309 | 106 | 339 | 1.41e-13 | 71.6 |
| Msa1035290 | AT4G08390.3 | 25.191 | 262 | 157 | 10 | 59 | 309 | 126 | 359 | 8.90e-13 | 68.9 |
| Msa1035290 | AT4G08390.2 | 25.191 | 262 | 157 | 10 | 59 | 309 | 127 | 360 | 9.90e-13 | 68.6 |
| Msa1035290 | AT4G08390.5 | 25.191 | 262 | 157 | 10 | 59 | 309 | 127 | 360 | 9.90e-13 | 68.6 |
| Msa1035290 | AT4G08390.1 | 25.191 | 262 | 157 | 10 | 59 | 309 | 127 | 360 | 9.90e-13 | 68.6 |
| Msa1035290 | AT4G35970.2 | 29.798 | 198 | 91 | 7 | 82 | 275 | 55 | 208 | 1.19e-12 | 67.0 |
Find 63 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCCTTGACTTCCCATTAA+TGG | 0.180025 | 7_1:+71104854 | None:intergenic |
| GGGTAATATTAGTCCATTAA+TGG | 0.242444 | 7_1:-71104867 | Msa1035290:CDS |
| TGCTGAAGCTTCTGTATCTT+TGG | 0.257038 | 7_1:-71105884 | Msa1035290:intron |
| TAAGCCAACAGCAGAAAATT+TGG | 0.257204 | 7_1:+71105605 | None:intergenic |
| TCCAATTGTAGGAAAGTTAA+TGG | 0.269235 | 7_1:-71104824 | Msa1035290:CDS |
| AGAAACATTGGGGCATGTTT+TGG | 0.272122 | 7_1:+71106258 | None:intergenic |
| TCCATTAACTTTCCTACAAT+TGG | 0.278391 | 7_1:+71104823 | None:intergenic |
| TGTGTCTTGTGCTGATATTT+TGG | 0.282472 | 7_1:-71105914 | Msa1035290:CDS |
| GATTATTAGCACTGTGAAAA+TGG | 0.288329 | 7_1:+71106327 | None:intergenic |
| GAATTAGGTGCACATACTTT+TGG | 0.305338 | 7_1:-71105220 | Msa1035290:intron |
| CAACAAAATTGTCCACAAAA+TGG | 0.305817 | 7_1:-71105100 | Msa1035290:CDS |
| CATTAGTGGAAAACAATTCT+TGG | 0.347221 | 7_1:+71104975 | None:intergenic |
| CCACGAGCTGAATTATTGTT+AGG | 0.354824 | 7_1:+71105991 | None:intergenic |
| AGTGATCTAGTTGCATTATC+TGG | 0.368131 | 7_1:-71105576 | Msa1035290:intron |
| CTGAACAGCATTTCTCACTA+TGG | 0.374100 | 7_1:+71106234 | None:intergenic |
| TGCAGTCAGGAGGTCCTTCA+TGG | 0.392241 | 7_1:-71105725 | Msa1035290:intron |
| CACTGAAGTTGAATAGTCTT+TGG | 0.398801 | 7_1:+71105173 | None:intergenic |
| TCGAAATTGTTTGGTGATGA+AGG | 0.418026 | 7_1:+71105049 | None:intergenic |
| GGTAATATTAGTCCATTAAT+GGG | 0.424844 | 7_1:-71104866 | Msa1035290:CDS |
| CTCACTATGGAAGAAACATT+GGG | 0.436946 | 7_1:+71106247 | None:intergenic |
| GTTGAATTCAGTGTTGGATC+AGG | 0.449005 | 7_1:+71105139 | None:intergenic |
| AGAAAATTTGGCAGTGACAT+TGG | 0.455959 | 7_1:+71105617 | None:intergenic |
| GATTGTGGCAGCACCATTAG+TGG | 0.462604 | 7_1:+71104961 | None:intergenic |
| GAGAAATTAGATCCAATTGT+AGG | 0.464574 | 7_1:-71104835 | Msa1035290:CDS |
| ATTCTTGGTCCGTTTGAAGA+AGG | 0.471200 | 7_1:+71104990 | None:intergenic |
| AATATTACCCATGTTAATCA+TGG | 0.480311 | 7_1:+71104880 | None:intergenic |
| GCTTTCAGTTGGAGCAGGAA+TGG | 0.484205 | 7_1:+71105644 | None:intergenic |
| AAATCAAGGCCTTCTTCAAA+CGG | 0.495854 | 7_1:-71104999 | Msa1035290:CDS |
| GTTAAGCTTTCAGTTGGAGC+AGG | 0.495979 | 7_1:+71105639 | None:intergenic |
| TAGTTGTTGTCGAAATTGTT+TGG | 0.499968 | 7_1:+71105040 | None:intergenic |
| TCTCACTATGGAAGAAACAT+TGG | 0.503003 | 7_1:+71106246 | None:intergenic |
| CCTTCATGGAATGTACTACT+TGG | 0.512650 | 7_1:-71105711 | Msa1035290:CDS |
| ACATTGGTTAAGCTTTCAGT+TGG | 0.513129 | 7_1:+71105633 | None:intergenic |
| CTATTCAACTTCAGTGGCAC+AGG | 0.520255 | 7_1:-71105166 | Msa1035290:CDS |
| TGTTAAGTCCATGATTAACA+TGG | 0.529221 | 7_1:-71104888 | Msa1035290:CDS |
| GAGCATGTGATGGATTAAGA+AGG | 0.529837 | 7_1:+71106302 | None:intergenic |
| AAAGTAGGAGAAAACATGGT+TGG | 0.544154 | 7_1:+71106355 | None:intergenic |
| CATGAAACTGAAGACGGGTT+AGG | 0.549547 | 7_1:+71106176 | None:intergenic |
| GTACTACTTGGCAGAAGGGA+TGG | 0.553719 | 7_1:-71105699 | Msa1035290:CDS |
| GGTCTGATTGCAAACCAATC+TGG | 0.553725 | 7_1:-71105678 | Msa1035290:CDS |
| CGAAATTGTTTGGTGATGAA+GGG | 0.556805 | 7_1:+71105050 | None:intergenic |
| AATTGTCCACAAAATGGAAG+TGG | 0.563268 | 7_1:-71105094 | Msa1035290:CDS |
| GTTGTTAACAATGGAGATTG+TGG | 0.566203 | 7_1:+71104946 | None:intergenic |
| GTTAAGTCCATGATTAACAT+GGG | 0.566926 | 7_1:-71104887 | Msa1035290:CDS |
| GAATGTACTACTTGGCAGAA+GGG | 0.569042 | 7_1:-71105703 | Msa1035290:CDS |
| CATGTGATGGATTAAGAAGG+AGG | 0.571412 | 7_1:+71106305 | None:intergenic |
| GAGGTTAGTTGAGCATGTGA+TGG | 0.579020 | 7_1:+71106292 | None:intergenic |
| AGATATGTTGAATTCAGTGT+TGG | 0.579335 | 7_1:+71105133 | None:intergenic |
| GGAATGTACTACTTGGCAGA+AGG | 0.583445 | 7_1:-71105704 | Msa1035290:CDS |
| GCTTGCAAAGTTGTTAACAA+TGG | 0.593422 | 7_1:+71104937 | None:intergenic |
| GCAATCATGAAACTGAAGAC+GGG | 0.594589 | 7_1:+71106171 | None:intergenic |
| GTTAATCATGGACTTAACAA+AGG | 0.595376 | 7_1:+71104892 | None:intergenic |
| AGTCCATTAATGGGAAGTCA+AGG | 0.598007 | 7_1:-71104857 | Msa1035290:CDS |
| AGCAATCATGAAACTGAAGA+CGG | 0.599227 | 7_1:+71106170 | None:intergenic |
| TGGATGTGTTGGCACCAGAT+TGG | 0.602779 | 7_1:+71105664 | None:intergenic |
| CCAAGTAGTACATTCCATGA+AGG | 0.604615 | 7_1:+71105711 | None:intergenic |
| CAAAGACTATTCAACTTCAG+TGG | 0.618577 | 7_1:-71105172 | Msa1035290:CDS |
| CTGAAGACGGGTTAGGCTCG+CGG | 0.619803 | 7_1:+71106183 | None:intergenic |
| CCTAACAATAATTCAGCTCG+TGG | 0.620664 | 7_1:-71105991 | Msa1035290:CDS |
| TGGAGCAGGAATGGATGTGT+TGG | 0.622693 | 7_1:+71105653 | None:intergenic |
| TCAGCACAAGACACAACAGC+AGG | 0.630251 | 7_1:+71105922 | None:intergenic |
| GATGTATATTTGCAGTCAGG+AGG | 0.632669 | 7_1:-71105735 | Msa1035290:intron |
| TCACTATGGAAGAAACATTG+GGG | 0.713143 | 7_1:+71106248 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTAACTAAATATCAATT+AGG | + | chr7_1:71105322-71105341 | None:intergenic | 10.0% |
| !! | TAATTAACTAAATATCAATT+AGG | + | chr7_1:71105322-71105341 | None:intergenic | 10.0% |
| !!! | TTATTAATTTGTGTATTTCA+GGG | - | chr7_1:71105100-71105119 | Msa1035290:CDS | 15.0% |
| !! | ATTTCAACAATTATATCTAA+TGG | - | chr7_1:71105792-71105811 | Msa1035290:intron | 15.0% |
| !!! | TTATTAATTTGTGTATTTCA+GGG | - | chr7_1:71105100-71105119 | Msa1035290:CDS | 15.0% |
| !! | ATTTCAACAATTATATCTAA+TGG | - | chr7_1:71105792-71105811 | Msa1035290:intron | 15.0% |
| !!! | GTTATTAATTTGTGTATTTC+AGG | - | chr7_1:71105099-71105118 | Msa1035290:CDS | 20.0% |
| !! | TAGCAAACTAATATTTATCA+TGG | - | chr7_1:71105373-71105392 | Msa1035290:intron | 20.0% |
| !! | AGACTTTAATTAGAATATGT+TGG | - | chr7_1:71105649-71105668 | Msa1035290:CDS | 20.0% |
| !! | TAATTAGAATATGTTGGATT+AGG | - | chr7_1:71105655-71105674 | Msa1035290:CDS | 20.0% |
| !! | TATATCTAATGGTTGAAATT+TGG | - | chr7_1:71105803-71105822 | Msa1035290:intron | 20.0% |
| !!! | GTTATTAATTTGTGTATTTC+AGG | - | chr7_1:71105099-71105118 | Msa1035290:CDS | 20.0% |
| !! | TAGCAAACTAATATTTATCA+TGG | - | chr7_1:71105373-71105392 | Msa1035290:intron | 20.0% |
| !! | AGACTTTAATTAGAATATGT+TGG | - | chr7_1:71105649-71105668 | Msa1035290:CDS | 20.0% |
| !! | TAATTAGAATATGTTGGATT+AGG | - | chr7_1:71105655-71105674 | Msa1035290:CDS | 20.0% |
| !! | TATATCTAATGGTTGAAATT+TGG | - | chr7_1:71105803-71105822 | Msa1035290:intron | 20.0% |
| ! | ATAAAAAGTAGGAGAAAACA+TGG | + | chr7_1:71104830-71104849 | None:intergenic | 25.0% |
| ! | GTGAAAATGGAATAAAAAGT+AGG | + | chr7_1:71104841-71104860 | None:intergenic | 25.0% |
| !! | AAGTTTTCATGAGTTAAACT+AGG | - | chr7_1:71105742-71105761 | Msa1035290:intron | 25.0% |
| ! | AAGAATCTTCTCAAAAATCA+AGG | - | chr7_1:71106165-71106184 | Msa1035290:CDS | 25.0% |
| ! | AATATTACCCATGTTAATCA+TGG | + | chr7_1:71106301-71106320 | None:intergenic | 25.0% |
| ! | GGTAATATTAGTCCATTAAT+GGG | - | chr7_1:71106312-71106331 | Msa1035290:CDS | 25.0% |
| ! | ATAAAAAGTAGGAGAAAACA+TGG | + | chr7_1:71104830-71104849 | None:intergenic | 25.0% |
| ! | GTGAAAATGGAATAAAAAGT+AGG | + | chr7_1:71104841-71104860 | None:intergenic | 25.0% |
| !! | AAGTTTTCATGAGTTAAACT+AGG | - | chr7_1:71105742-71105761 | Msa1035290:intron | 25.0% |
| ! | AAGAATCTTCTCAAAAATCA+AGG | - | chr7_1:71106165-71106184 | Msa1035290:CDS | 25.0% |
| ! | AATATTACCCATGTTAATCA+TGG | + | chr7_1:71106301-71106320 | None:intergenic | 25.0% |
| ! | GGTAATATTAGTCCATTAAT+GGG | - | chr7_1:71106312-71106331 | Msa1035290:CDS | 25.0% |
| GATTATTAGCACTGTGAAAA+TGG | + | chr7_1:71104854-71104873 | None:intergenic | 30.0% | |
| TGATTAATGAGCTAGAGTTT+AGG | - | chr7_1:71105057-71105076 | Msa1035290:CDS | 30.0% | |
| ! | GCATCTCTTTTATTAGATCA+AGG | - | chr7_1:71105130-71105149 | Msa1035290:CDS | 30.0% |
| ! | TCTCTTTTATTAGATCAAGG+TGG | - | chr7_1:71105133-71105152 | Msa1035290:CDS | 30.0% |
| ! | TAACTATTGGTTGACACAAA+TGG | - | chr7_1:71105927-71105946 | Msa1035290:CDS | 30.0% |
| CAAATGGATCAACTTGAATT+AGG | - | chr7_1:71105943-71105962 | Msa1035290:CDS | 30.0% | |
| AGATATGTTGAATTCAGTGT+TGG | + | chr7_1:71106048-71106067 | None:intergenic | 30.0% | |
| CAACAAAATTGTCCACAAAA+TGG | - | chr7_1:71106078-71106097 | Msa1035290:intron | 30.0% | |
| TAGTTGTTGTCGAAATTGTT+TGG | + | chr7_1:71106141-71106160 | None:intergenic | 30.0% | |
| CATTAGTGGAAAACAATTCT+TGG | + | chr7_1:71106206-71106225 | None:intergenic | 30.0% | |
| ! | CAAGAATTGTTTTCCACTAA+TGG | - | chr7_1:71106204-71106223 | Msa1035290:CDS | 30.0% |
| GTTAATCATGGACTTAACAA+AGG | + | chr7_1:71106289-71106308 | None:intergenic | 30.0% | |
| TGTTAAGTCCATGATTAACA+TGG | - | chr7_1:71106290-71106309 | Msa1035290:CDS | 30.0% | |
| GTTAAGTCCATGATTAACAT+GGG | - | chr7_1:71106291-71106310 | Msa1035290:CDS | 30.0% | |
| GGGTAATATTAGTCCATTAA+TGG | - | chr7_1:71106311-71106330 | Msa1035290:CDS | 30.0% | |
| GAGAAATTAGATCCAATTGT+AGG | - | chr7_1:71106343-71106362 | Msa1035290:CDS | 30.0% | |
| TCCAATTGTAGGAAAGTTAA+TGG | - | chr7_1:71106354-71106373 | Msa1035290:exon | 30.0% | |
| TCCATTAACTTTCCTACAAT+TGG | + | chr7_1:71106358-71106377 | None:intergenic | 30.0% | |
| GATTATTAGCACTGTGAAAA+TGG | + | chr7_1:71104854-71104873 | None:intergenic | 30.0% | |
| TGATTAATGAGCTAGAGTTT+AGG | - | chr7_1:71105057-71105076 | Msa1035290:CDS | 30.0% | |
| ! | GCATCTCTTTTATTAGATCA+AGG | - | chr7_1:71105130-71105149 | Msa1035290:CDS | 30.0% |
| ! | TCTCTTTTATTAGATCAAGG+TGG | - | chr7_1:71105133-71105152 | Msa1035290:CDS | 30.0% |
| ! | TAACTATTGGTTGACACAAA+TGG | - | chr7_1:71105927-71105946 | Msa1035290:CDS | 30.0% |
| CAAATGGATCAACTTGAATT+AGG | - | chr7_1:71105943-71105962 | Msa1035290:CDS | 30.0% | |
| AGATATGTTGAATTCAGTGT+TGG | + | chr7_1:71106048-71106067 | None:intergenic | 30.0% | |
| CAACAAAATTGTCCACAAAA+TGG | - | chr7_1:71106078-71106097 | Msa1035290:intron | 30.0% | |
| TAGTTGTTGTCGAAATTGTT+TGG | + | chr7_1:71106141-71106160 | None:intergenic | 30.0% | |
| CATTAGTGGAAAACAATTCT+TGG | + | chr7_1:71106206-71106225 | None:intergenic | 30.0% | |
| ! | CAAGAATTGTTTTCCACTAA+TGG | - | chr7_1:71106204-71106223 | Msa1035290:CDS | 30.0% |
| GTTAATCATGGACTTAACAA+AGG | + | chr7_1:71106289-71106308 | None:intergenic | 30.0% | |
| TGTTAAGTCCATGATTAACA+TGG | - | chr7_1:71106290-71106309 | Msa1035290:CDS | 30.0% | |
| GTTAAGTCCATGATTAACAT+GGG | - | chr7_1:71106291-71106310 | Msa1035290:CDS | 30.0% | |
| GGGTAATATTAGTCCATTAA+TGG | - | chr7_1:71106311-71106330 | Msa1035290:CDS | 30.0% | |
| GAGAAATTAGATCCAATTGT+AGG | - | chr7_1:71106343-71106362 | Msa1035290:CDS | 30.0% | |
| TCCAATTGTAGGAAAGTTAA+TGG | - | chr7_1:71106354-71106373 | Msa1035290:exon | 30.0% | |
| TCCATTAACTTTCCTACAAT+TGG | + | chr7_1:71106358-71106377 | None:intergenic | 30.0% | |
| AAAGTAGGAGAAAACATGGT+TGG | + | chr7_1:71104826-71104845 | None:intergenic | 35.0% | |
| !!! | TGTTTTGGAGTAGAATGTTG+AGG | + | chr7_1:71104908-71104927 | None:intergenic | 35.0% |
| TCACTATGGAAGAAACATTG+GGG | + | chr7_1:71104933-71104952 | None:intergenic | 35.0% | |
| CTCACTATGGAAGAAACATT+GGG | + | chr7_1:71104934-71104953 | None:intergenic | 35.0% | |
| TCTCACTATGGAAGAAACAT+TGG | + | chr7_1:71104935-71104954 | None:intergenic | 35.0% | |
| AGCAATCATGAAACTGAAGA+CGG | + | chr7_1:71105011-71105030 | None:intergenic | 35.0% | |
| ! | AGGACATGAATTTTCAACAG+AGG | + | chr7_1:71105239-71105258 | None:intergenic | 35.0% |
| !! | TGTGTCTTGTGCTGATATTT+TGG | - | chr7_1:71105264-71105283 | Msa1035290:intron | 35.0% |
| GATGATGTATATTTGCAGTC+AGG | - | chr7_1:71105440-71105459 | Msa1035290:intron | 35.0% | |
| ! | ACATTGGTTAAGCTTTCAGT+TGG | + | chr7_1:71105548-71105567 | None:intergenic | 35.0% |
| AGAAAATTTGGCAGTGACAT+TGG | + | chr7_1:71105564-71105583 | None:intergenic | 35.0% | |
| TAAGCCAACAGCAGAAAATT+TGG | + | chr7_1:71105576-71105595 | None:intergenic | 35.0% | |
| AGTGATCTAGTTGCATTATC+TGG | - | chr7_1:71105602-71105621 | Msa1035290:CDS | 35.0% | |
| ! | GAATTAGGTGCACATACTTT+TGG | - | chr7_1:71105958-71105977 | Msa1035290:CDS | 35.0% |
| CACTGAAGTTGAATAGTCTT+TGG | + | chr7_1:71106008-71106027 | None:intergenic | 35.0% | |
| CAAAGACTATTCAACTTCAG+TGG | - | chr7_1:71106006-71106025 | Msa1035290:CDS | 35.0% | |
| AATTGTCCACAAAATGGAAG+TGG | - | chr7_1:71106084-71106103 | Msa1035290:intron | 35.0% | |
| !! | CGAAATTGTTTGGTGATGAA+GGG | + | chr7_1:71106131-71106150 | None:intergenic | 35.0% |
| !! | TCGAAATTGTTTGGTGATGA+AGG | + | chr7_1:71106132-71106151 | None:intergenic | 35.0% |
| AAATCAAGGCCTTCTTCAAA+CGG | - | chr7_1:71106179-71106198 | Msa1035290:CDS | 35.0% | |
| GTTGTTAACAATGGAGATTG+TGG | + | chr7_1:71106235-71106254 | None:intergenic | 35.0% | |
| GCTTGCAAAGTTGTTAACAA+TGG | + | chr7_1:71106244-71106263 | None:intergenic | 35.0% | |
| AGGCTTCAAAAAAAGCTGTT+TGG | + | chr7_1:71106269-71106288 | None:intergenic | 35.0% | |
| AAAGTAGGAGAAAACATGGT+TGG | + | chr7_1:71104826-71104845 | None:intergenic | 35.0% | |
| !!! | TGTTTTGGAGTAGAATGTTG+AGG | + | chr7_1:71104908-71104927 | None:intergenic | 35.0% |
| TCACTATGGAAGAAACATTG+GGG | + | chr7_1:71104933-71104952 | None:intergenic | 35.0% | |
| CTCACTATGGAAGAAACATT+GGG | + | chr7_1:71104934-71104953 | None:intergenic | 35.0% | |
| TCTCACTATGGAAGAAACAT+TGG | + | chr7_1:71104935-71104954 | None:intergenic | 35.0% | |
| AGCAATCATGAAACTGAAGA+CGG | + | chr7_1:71105011-71105030 | None:intergenic | 35.0% | |
| ! | AGGACATGAATTTTCAACAG+AGG | + | chr7_1:71105239-71105258 | None:intergenic | 35.0% |
| !! | TGTGTCTTGTGCTGATATTT+TGG | - | chr7_1:71105264-71105283 | Msa1035290:intron | 35.0% |
| GATGATGTATATTTGCAGTC+AGG | - | chr7_1:71105440-71105459 | Msa1035290:intron | 35.0% | |
| ! | ACATTGGTTAAGCTTTCAGT+TGG | + | chr7_1:71105548-71105567 | None:intergenic | 35.0% |
| AGAAAATTTGGCAGTGACAT+TGG | + | chr7_1:71105564-71105583 | None:intergenic | 35.0% | |
| TAAGCCAACAGCAGAAAATT+TGG | + | chr7_1:71105576-71105595 | None:intergenic | 35.0% | |
| AGTGATCTAGTTGCATTATC+TGG | - | chr7_1:71105602-71105621 | Msa1035290:CDS | 35.0% | |
| ! | GAATTAGGTGCACATACTTT+TGG | - | chr7_1:71105958-71105977 | Msa1035290:CDS | 35.0% |
| CACTGAAGTTGAATAGTCTT+TGG | + | chr7_1:71106008-71106027 | None:intergenic | 35.0% | |
| CAAAGACTATTCAACTTCAG+TGG | - | chr7_1:71106006-71106025 | Msa1035290:CDS | 35.0% | |
| AATTGTCCACAAAATGGAAG+TGG | - | chr7_1:71106084-71106103 | Msa1035290:intron | 35.0% | |
| !! | CGAAATTGTTTGGTGATGAA+GGG | + | chr7_1:71106131-71106150 | None:intergenic | 35.0% |
| !! | TCGAAATTGTTTGGTGATGA+AGG | + | chr7_1:71106132-71106151 | None:intergenic | 35.0% |
| AAATCAAGGCCTTCTTCAAA+CGG | - | chr7_1:71106179-71106198 | Msa1035290:CDS | 35.0% | |
| GTTGTTAACAATGGAGATTG+TGG | + | chr7_1:71106235-71106254 | None:intergenic | 35.0% | |
| GCTTGCAAAGTTGTTAACAA+TGG | + | chr7_1:71106244-71106263 | None:intergenic | 35.0% | |
| AGGCTTCAAAAAAAGCTGTT+TGG | + | chr7_1:71106269-71106288 | None:intergenic | 35.0% | |
| !! | CATGTGATGGATTAAGAAGG+AGG | + | chr7_1:71104876-71104895 | None:intergenic | 40.0% |
| !! | GAGCATGTGATGGATTAAGA+AGG | + | chr7_1:71104879-71104898 | None:intergenic | 40.0% |
| ! | AGAAACATTGGGGCATGTTT+TGG | + | chr7_1:71104923-71104942 | None:intergenic | 40.0% |
| CTGAACAGCATTTCTCACTA+TGG | + | chr7_1:71104947-71104966 | None:intergenic | 40.0% | |
| GCAATCATGAAACTGAAGAC+GGG | + | chr7_1:71105010-71105029 | None:intergenic | 40.0% | |
| CCACGAGCTGAATTATTGTT+AGG | + | chr7_1:71105190-71105209 | None:intergenic | 40.0% | |
| CCTAACAATAATTCAGCTCG+TGG | - | chr7_1:71105187-71105206 | Msa1035290:CDS | 40.0% | |
| TGCTGAAGCTTCTGTATCTT+TGG | - | chr7_1:71105294-71105313 | Msa1035290:intron | 40.0% | |
| GATGTATATTTGCAGTCAGG+AGG | - | chr7_1:71105443-71105462 | Msa1035290:intron | 40.0% | |
| CCAAGTAGTACATTCCATGA+AGG | + | chr7_1:71105470-71105489 | None:intergenic | 40.0% | |
| CCTTCATGGAATGTACTACT+TGG | - | chr7_1:71105467-71105486 | Msa1035290:intron | 40.0% | |
| GAATGTACTACTTGGCAGAA+GGG | - | chr7_1:71105475-71105494 | Msa1035290:intron | 40.0% | |
| ! | ACTGCCAAATTTTCTGCTGT+TGG | - | chr7_1:71105569-71105588 | Msa1035290:intron | 40.0% |
| ! | GTTGAATTCAGTGTTGGATC+AGG | + | chr7_1:71106042-71106061 | None:intergenic | 40.0% |
| ! | GTGTTACCACTTCCATTTTG+TGG | + | chr7_1:71106093-71106112 | None:intergenic | 40.0% |
| ATTCTTGGTCCGTTTGAAGA+AGG | + | chr7_1:71106191-71106210 | None:intergenic | 40.0% | |
| AGTCCATTAATGGGAAGTCA+AGG | - | chr7_1:71106321-71106340 | Msa1035290:CDS | 40.0% | |
| TCTCCTTGACTTCCCATTAA+TGG | + | chr7_1:71106327-71106346 | None:intergenic | 40.0% | |
| !! | CATGTGATGGATTAAGAAGG+AGG | + | chr7_1:71104876-71104895 | None:intergenic | 40.0% |
| !! | GAGCATGTGATGGATTAAGA+AGG | + | chr7_1:71104879-71104898 | None:intergenic | 40.0% |
| ! | AGAAACATTGGGGCATGTTT+TGG | + | chr7_1:71104923-71104942 | None:intergenic | 40.0% |
| CTGAACAGCATTTCTCACTA+TGG | + | chr7_1:71104947-71104966 | None:intergenic | 40.0% | |
| GCAATCATGAAACTGAAGAC+GGG | + | chr7_1:71105010-71105029 | None:intergenic | 40.0% | |
| CCACGAGCTGAATTATTGTT+AGG | + | chr7_1:71105190-71105209 | None:intergenic | 40.0% | |
| CCTAACAATAATTCAGCTCG+TGG | - | chr7_1:71105187-71105206 | Msa1035290:CDS | 40.0% | |
| TGCTGAAGCTTCTGTATCTT+TGG | - | chr7_1:71105294-71105313 | Msa1035290:intron | 40.0% | |
| GATGTATATTTGCAGTCAGG+AGG | - | chr7_1:71105443-71105462 | Msa1035290:intron | 40.0% | |
| CCAAGTAGTACATTCCATGA+AGG | + | chr7_1:71105470-71105489 | None:intergenic | 40.0% | |
| CCTTCATGGAATGTACTACT+TGG | - | chr7_1:71105467-71105486 | Msa1035290:intron | 40.0% | |
| GAATGTACTACTTGGCAGAA+GGG | - | chr7_1:71105475-71105494 | Msa1035290:intron | 40.0% | |
| ! | ACTGCCAAATTTTCTGCTGT+TGG | - | chr7_1:71105569-71105588 | Msa1035290:intron | 40.0% |
| ! | GTTGAATTCAGTGTTGGATC+AGG | + | chr7_1:71106042-71106061 | None:intergenic | 40.0% |
| ! | GTGTTACCACTTCCATTTTG+TGG | + | chr7_1:71106093-71106112 | None:intergenic | 40.0% |
| ATTCTTGGTCCGTTTGAAGA+AGG | + | chr7_1:71106191-71106210 | None:intergenic | 40.0% | |
| AGTCCATTAATGGGAAGTCA+AGG | - | chr7_1:71106321-71106340 | Msa1035290:CDS | 40.0% | |
| TCTCCTTGACTTCCCATTAA+TGG | + | chr7_1:71106327-71106346 | None:intergenic | 40.0% | |
| ! | GAGGTTAGTTGAGCATGTGA+TGG | + | chr7_1:71104889-71104908 | None:intergenic | 45.0% |
| ! | CATGAAACTGAAGACGGGTT+AGG | + | chr7_1:71105005-71105024 | None:intergenic | 45.0% |
| GGAATGTACTACTTGGCAGA+AGG | - | chr7_1:71105474-71105493 | Msa1035290:intron | 45.0% | |
| GGTCTGATTGCAAACCAATC+TGG | - | chr7_1:71105500-71105519 | Msa1035290:intron | 45.0% | |
| GTTAAGCTTTCAGTTGGAGC+AGG | + | chr7_1:71105542-71105561 | None:intergenic | 45.0% | |
| CTGCACTAACTGAACGACTA+AGG | + | chr7_1:71105768-71105787 | None:intergenic | 45.0% | |
| GTTGAAATTTGGACGCACGA+CGG | - | chr7_1:71105814-71105833 | Msa1035290:intron | 45.0% | |
| CTATTCAACTTCAGTGGCAC+AGG | - | chr7_1:71106012-71106031 | Msa1035290:CDS | 45.0% | |
| ! | GAGGTTAGTTGAGCATGTGA+TGG | + | chr7_1:71104889-71104908 | None:intergenic | 45.0% |
| ! | CATGAAACTGAAGACGGGTT+AGG | + | chr7_1:71105005-71105024 | None:intergenic | 45.0% |
| GGAATGTACTACTTGGCAGA+AGG | - | chr7_1:71105474-71105493 | Msa1035290:intron | 45.0% | |
| GGTCTGATTGCAAACCAATC+TGG | - | chr7_1:71105500-71105519 | Msa1035290:intron | 45.0% | |
| GTTAAGCTTTCAGTTGGAGC+AGG | + | chr7_1:71105542-71105561 | None:intergenic | 45.0% | |
| CTGCACTAACTGAACGACTA+AGG | + | chr7_1:71105768-71105787 | None:intergenic | 45.0% | |
| GTTGAAATTTGGACGCACGA+CGG | - | chr7_1:71105814-71105833 | Msa1035290:intron | 45.0% | |
| CTATTCAACTTCAGTGGCAC+AGG | - | chr7_1:71106012-71106031 | Msa1035290:CDS | 45.0% | |
| !!! | ATTTTTTTTTTTTTAACTAT+TGG | - | chr7_1:71105914-71105933 | Msa1035290:CDS | 5.0% |
| !!! | ATTTTTTTTTTTTTAACTAT+TGG | - | chr7_1:71105914-71105933 | Msa1035290:CDS | 5.0% |
| TCAGCACAAGACACAACAGC+AGG | + | chr7_1:71105259-71105278 | None:intergenic | 50.0% | |
| GTACTACTTGGCAGAAGGGA+TGG | - | chr7_1:71105479-71105498 | Msa1035290:intron | 50.0% | |
| ! | TGGATGTGTTGGCACCAGAT+TGG | + | chr7_1:71105517-71105536 | None:intergenic | 50.0% |
| TGGAGCAGGAATGGATGTGT+TGG | + | chr7_1:71105528-71105547 | None:intergenic | 50.0% | |
| GCTTTCAGTTGGAGCAGGAA+TGG | + | chr7_1:71105537-71105556 | None:intergenic | 50.0% | |
| GATTGTGGCAGCACCATTAG+TGG | + | chr7_1:71106220-71106239 | None:intergenic | 50.0% | |
| TCAGCACAAGACACAACAGC+AGG | + | chr7_1:71105259-71105278 | None:intergenic | 50.0% | |
| GTACTACTTGGCAGAAGGGA+TGG | - | chr7_1:71105479-71105498 | Msa1035290:intron | 50.0% | |
| ! | TGGATGTGTTGGCACCAGAT+TGG | + | chr7_1:71105517-71105536 | None:intergenic | 50.0% |
| TGGAGCAGGAATGGATGTGT+TGG | + | chr7_1:71105528-71105547 | None:intergenic | 50.0% | |
| GCTTTCAGTTGGAGCAGGAA+TGG | + | chr7_1:71105537-71105556 | None:intergenic | 50.0% | |
| GATTGTGGCAGCACCATTAG+TGG | + | chr7_1:71106220-71106239 | None:intergenic | 50.0% | |
| GTTAGGCTCGCGGTAATACG+AGG | + | chr7_1:71104988-71105007 | None:intergenic | 55.0% | |
| TGCAGTCAGGAGGTCCTTCA+TGG | - | chr7_1:71105453-71105472 | Msa1035290:intron | 55.0% | |
| GTTAGGCTCGCGGTAATACG+AGG | + | chr7_1:71104988-71105007 | None:intergenic | 55.0% | |
| TGCAGTCAGGAGGTCCTTCA+TGG | - | chr7_1:71105453-71105472 | Msa1035290:intron | 55.0% | |
| !! | CTGAAGACGGGTTAGGCTCG+CGG | + | chr7_1:71104998-71105017 | None:intergenic | 60.0% |
| !! | CTGAAGACGGGTTAGGCTCG+CGG | + | chr7_1:71104998-71105017 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 71104817 | 71106383 | 71104817 | ID=Msa1035290;Name=Msa1035290 |
| chr7_1 | mRNA | 71104817 | 71106383 | 71104817 | ID=Msa1035290-mRNA-1;Parent=Msa1035290;Name=Msa1035290-mRNA-1;_AED=0.14;_eAED=0.14;_QI=12|1|0.5|1|1|1|4|0|329 |
| chr7_1 | exon | 71104817 | 71105235 | 71104817 | ID=Msa1035290-mRNA-1:exon:17149;Parent=Msa1035290-mRNA-1 |
| chr7_1 | exon | 71105577 | 71105742 | 71105577 | ID=Msa1035290-mRNA-1:exon:17148;Parent=Msa1035290-mRNA-1 |
| chr7_1 | exon | 71105885 | 71106079 | 71105885 | ID=Msa1035290-mRNA-1:exon:17147;Parent=Msa1035290-mRNA-1 |
| chr7_1 | exon | 71106162 | 71106383 | 71106162 | ID=Msa1035290-mRNA-1:exon:17146;Parent=Msa1035290-mRNA-1 |
| chr7_1 | five_prime_UTR | 71106372 | 71106383 | 71106372 | ID=Msa1035290-mRNA-1:five_prime_utr;Parent=Msa1035290-mRNA-1 |
| chr7_1 | CDS | 71106162 | 71106371 | 71106162 | ID=Msa1035290-mRNA-1:cds;Parent=Msa1035290-mRNA-1 |
| chr7_1 | CDS | 71105885 | 71106079 | 71105885 | ID=Msa1035290-mRNA-1:cds;Parent=Msa1035290-mRNA-1 |
| chr7_1 | CDS | 71105577 | 71105742 | 71105577 | ID=Msa1035290-mRNA-1:cds;Parent=Msa1035290-mRNA-1 |
| chr7_1 | CDS | 71104817 | 71105235 | 71104817 | ID=Msa1035290-mRNA-1:cds;Parent=Msa1035290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
