Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1327440 | KEH20067.1 | 97.288 | 295 | 8 | 0 | 1 | 295 | 1 | 295 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1327440 | sp|Q9LFD5|BPA1_ARATH | 65.106 | 235 | 74 | 5 | 18 | 252 | 4 | 230 | 2.14e-99 | 295 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1327440 | A0A072TRN4 | 97.288 | 295 | 8 | 0 | 1 | 295 | 1 | 295 | 0.0 | 575 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027030 | Msa1327440 | -0.810588 | 1.069659e-50 | -8.615850e-47 |
| Msa0037180 | Msa1327440 | 0.834205 | 3.428899e-56 | -8.615850e-47 |
| Msa0051910 | Msa1327440 | 0.800317 | 1.525322e-48 | -8.615850e-47 |
| Msa0074860 | Msa1327440 | -0.801066 | 1.072788e-48 | -8.615850e-47 |
| Msa0081120 | Msa1327440 | -0.805429 | 1.340682e-49 | -8.615850e-47 |
| Msa0092220 | Msa1327440 | 0.820828 | 5.579377e-53 | -8.615850e-47 |
| Msa0616890 | Msa1327440 | -0.802981 | 4.334963e-49 | -8.615850e-47 |
| Msa0625900 | Msa1327440 | -0.806680 | 7.314498e-50 | -8.615850e-47 |
| Msa0638820 | Msa1327440 | 0.810658 | 1.033370e-50 | -8.615850e-47 |
| Msa0663690 | Msa1327440 | -0.801971 | 7.001011e-49 | -8.615850e-47 |
| Msa0695140 | Msa1327440 | 0.806542 | 7.819211e-50 | -8.615850e-47 |
| Msa0697520 | Msa1327440 | 0.809044 | 2.298244e-50 | -8.615850e-47 |
| Msa0701800 | Msa1327440 | -0.800498 | 1.401046e-48 | -8.615850e-47 |
| Msa0721930 | Msa1327440 | 0.820087 | 8.256608e-53 | -8.615850e-47 |
| Msa0731580 | Msa1327440 | 0.804183 | 2.440793e-49 | -8.615850e-47 |
| Msa0762930 | Msa1327440 | 0.824645 | 7.216556e-54 | -8.615850e-47 |
| Msa0789220 | Msa1327440 | 0.802825 | 4.668448e-49 | -8.615850e-47 |
| Msa0127350 | Msa1327440 | -0.800807 | 1.212039e-48 | -8.615850e-47 |
| Msa0127910 | Msa1327440 | -0.804429 | 2.169507e-49 | -8.615850e-47 |
| Msa0167150 | Msa1327440 | -0.807807 | 4.220841e-50 | -8.615850e-47 |
| Msa0177320 | Msa1327440 | 0.823769 | 1.158681e-53 | -8.615850e-47 |
| Msa0180100 | Msa1327440 | -0.806102 | 9.684028e-50 | -8.615850e-47 |
| Msa0209370 | Msa1327440 | -0.800229 | 1.589763e-48 | -8.615850e-47 |
| Msa0225070 | Msa1327440 | -0.846613 | 1.945444e-59 | -8.615850e-47 |
| Msa0229350 | Msa1327440 | -0.804249 | 2.365545e-49 | -8.615850e-47 |
| Msa0236690 | Msa1327440 | -0.803010 | 4.275603e-49 | -8.615850e-47 |
| Msa0237650 | Msa1327440 | -0.803711 | 3.059708e-49 | -8.615850e-47 |
| Msa1228600 | Msa1327440 | -0.815879 | 7.373935e-52 | -8.615850e-47 |
| Msa1251230 | Msa1327440 | 0.919504 | 4.143399e-87 | -8.615850e-47 |
| Msa1254910 | Msa1327440 | 0.806124 | 9.578214e-50 | -8.615850e-47 |
| Msa1256490 | Msa1327440 | -0.801225 | 9.955334e-49 | -8.615850e-47 |
| Msa1266120 | Msa1327440 | -0.804196 | 2.426007e-49 | -8.615850e-47 |
| Msa1279200 | Msa1327440 | -0.800217 | 1.598518e-48 | -8.615850e-47 |
| Msa1296810 | Msa1327440 | -0.800806 | 1.212757e-48 | -8.615850e-47 |
| Msa1297220 | Msa1327440 | -0.821291 | 4.366439e-53 | -8.615850e-47 |
| Msa1298480 | Msa1327440 | -0.803296 | 3.730036e-49 | -8.615850e-47 |
| Msa1315880 | Msa1327440 | -0.812665 | 3.782449e-51 | -8.615850e-47 |
| Msa1323260 | Msa1327440 | -0.815044 | 1.131107e-51 | -8.615850e-47 |
| Msa1327440 | Msa1330400 | 0.804076 | 2.569028e-49 | -8.615850e-47 |
| Msa1327440 | Msa1342360 | -0.819298 | 1.249857e-52 | -8.615850e-47 |
| Msa1327440 | Msa1350580 | -0.822066 | 2.889625e-53 | -8.615850e-47 |
| Msa1327440 | Msa1350590 | -0.800294 | 1.541722e-48 | -8.615850e-47 |
| Msa1327440 | Msa1373310 | -0.812802 | 3.529142e-51 | -8.615850e-47 |
| Msa1327440 | Msa1377980 | -0.833308 | 5.745035e-56 | -8.615850e-47 |
| Msa1327440 | Msa1395380 | -0.800977 | 1.118898e-48 | -8.615850e-47 |
| Msa1327440 | Msa1408280 | -0.832033 | 1.190958e-55 | -8.615850e-47 |
| Msa1327440 | Msa1413150 | 0.801609 | 8.305572e-49 | -8.615850e-47 |
| Msa1327440 | Msa1418840 | -0.803617 | 3.200242e-49 | -8.615850e-47 |
| Msa1327440 | Msa1420540 | 0.831877 | 1.300829e-55 | -8.615850e-47 |
| Msa1327440 | Msa1429470 | 0.803300 | 3.723586e-49 | -8.615850e-47 |
| Msa1327440 | Msa1454300 | -0.801455 | 8.930221e-49 | -8.615850e-47 |
| Msa0368620 | Msa1327440 | 0.814218 | 1.723466e-51 | -8.615850e-47 |
| Msa0382020 | Msa1327440 | -0.801383 | 9.242188e-49 | -8.615850e-47 |
| Msa0389710 | Msa1327440 | 0.820685 | 6.018702e-53 | -8.615850e-47 |
| Msa0390590 | Msa1327440 | -0.806760 | 7.033295e-50 | -8.615850e-47 |
| Msa0403740 | Msa1327440 | -0.815311 | 9.865000e-52 | -8.615850e-47 |
| Msa0412580 | Msa1327440 | -0.805996 | 1.019176e-49 | -8.615850e-47 |
| Msa0416040 | Msa1327440 | 0.824097 | 9.708891e-54 | -8.615850e-47 |
| Msa0428300 | Msa1327440 | -0.801795 | 7.605341e-49 | -8.615850e-47 |
| Msa0450230 | Msa1327440 | -0.800371 | 1.487556e-48 | -8.615850e-47 |
| Msa0450890 | Msa1327440 | -0.800504 | 1.397242e-48 | -8.615850e-47 |
| Msa0456450 | Msa1327440 | -0.819192 | 1.321185e-52 | -8.615850e-47 |
| Msa0457070 | Msa1327440 | -0.825858 | 3.726124e-54 | -8.615850e-47 |
| Msa0480260 | Msa1327440 | 0.811185 | 7.945340e-51 | -8.615850e-47 |
| Msa0998660 | Msa1327440 | -0.808759 | 2.644801e-50 | -8.615850e-47 |
| Msa1039150 | Msa1327440 | -0.800449 | 1.433707e-48 | -8.615850e-47 |
| Msa1080820 | Msa1327440 | 0.829494 | 4.987826e-55 | -8.615850e-47 |
| Msa1088000 | Msa1327440 | -0.809716 | 1.649079e-50 | -8.615850e-47 |
| Msa0254640 | Msa1327440 | 0.812288 | 4.571286e-51 | -8.615850e-47 |
| Msa0266140 | Msa1327440 | -0.807586 | 4.700911e-50 | -8.615850e-47 |
| Msa0267450 | Msa1327440 | -0.804097 | 2.544463e-49 | -8.615850e-47 |
| Msa0267510 | Msa1327440 | -0.802783 | 4.762478e-49 | -8.615850e-47 |
| Msa0304060 | Msa1327440 | -0.806939 | 6.446953e-50 | -8.615850e-47 |
| Msa0332360 | Msa1327440 | 0.801585 | 8.400684e-49 | -8.615850e-47 |
| Msa0340370 | Msa1327440 | 0.804120 | 2.516550e-49 | -8.615850e-47 |
| Msa0364030 | Msa1327440 | -0.814943 | 1.190628e-51 | -8.615850e-47 |
| Msa1118960 | Msa1327440 | 0.829033 | 6.453800e-55 | -8.615850e-47 |
| Msa1132850 | Msa1327440 | 0.808162 | 3.546364e-50 | -8.615850e-47 |
| Msa1174280 | Msa1327440 | 0.801532 | 8.611884e-49 | -8.615850e-47 |
| Msa1190610 | Msa1327440 | 0.820145 | 8.008226e-53 | -8.615850e-47 |
| Msa1191530 | Msa1327440 | -0.806309 | 8.757385e-50 | -8.615850e-47 |
| Msa1192800 | Msa1327440 | 0.976253 | 1.791230e-141 | -8.615850e-47 |
| Msa1204870 | Msa1327440 | -0.803923 | 2.765250e-49 | -8.615850e-47 |
| Msa1204900 | Msa1327440 | -0.804124 | 2.510913e-49 | -8.615850e-47 |
| Msa1205270 | Msa1327440 | -0.823728 | 1.184949e-53 | -8.615850e-47 |
| Msa1209990 | Msa1327440 | -0.804497 | 2.100072e-49 | -8.615850e-47 |
| Msa1215390 | Msa1327440 | 0.803249 | 3.814992e-49 | -8.615850e-47 |
| Msa1217260 | Msa1327440 | 0.801653 | 8.136226e-49 | -8.615850e-47 |
| Msa0508160 | Msa1327440 | 0.812342 | 4.449946e-51 | -8.615850e-47 |
| Msa0518190 | Msa1327440 | 0.800007 | 1.763840e-48 | -8.615850e-47 |
| Msa0519070 | Msa1327440 | -0.804699 | 1.906078e-49 | -8.615850e-47 |
| Msa0524260 | Msa1327440 | 0.803586 | 3.248426e-49 | -8.615850e-47 |
| Msa0538050 | Msa1327440 | -0.822889 | 1.860530e-53 | -8.615850e-47 |
| Msa0558510 | Msa1327440 | 0.806021 | 1.006970e-49 | -8.615850e-47 |
| Msa0572730 | Msa1327440 | -0.839067 | 1.978084e-57 | -8.615850e-47 |
| Msa0580380 | Msa1327440 | 0.801214 | 1.000864e-48 | -8.615850e-47 |
| Msa0582270 | Msa1327440 | -0.811973 | 5.354069e-51 | -8.615850e-47 |
| Msa0861400 | Msa1327440 | -0.821862 | 3.222282e-53 | -8.615850e-47 |
| Msa0881510 | Msa1327440 | 0.800040 | 1.736812e-48 | -8.615850e-47 |
| Msa0947550 | Msa1327440 | -0.803018 | 4.257698e-49 | -8.615850e-47 |
| Msa0967900 | Msa1327440 | -0.847772 | 9.357963e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1327440 | MtrunA17_Chr8g0366351 | 96.774 | 279 | 9 | 0 | 17 | 295 | 1 | 279 | 0.0 | 539 |
| Msa1327440 | MtrunA17_Chr5g0410831 | 77.660 | 282 | 60 | 1 | 17 | 295 | 1 | 282 | 4.73e-149 | 419 |
| Msa1327440 | MtrunA17_Chr1g0161591 | 56.202 | 258 | 101 | 3 | 19 | 269 | 31 | 283 | 3.53e-95 | 283 |
| Msa1327440 | MtrunA17_Chr8g0392141 | 50.877 | 285 | 130 | 2 | 4 | 288 | 16 | 290 | 1.53e-93 | 279 |
| Msa1327440 | MtrunA17_Chr5g0410821 | 77.778 | 153 | 34 | 0 | 129 | 281 | 1 | 153 | 8.27e-76 | 228 |
| Msa1327440 | MtrunA17_Chr7g0253621 | 50.000 | 250 | 107 | 3 | 17 | 250 | 1 | 248 | 9.47e-75 | 229 |
| Msa1327440 | MtrunA17_Chr5g0416421 | 38.750 | 240 | 128 | 4 | 22 | 246 | 10 | 245 | 1.76e-46 | 156 |
| Msa1327440 | MtrunA17_Chr7g0217131 | 32.283 | 254 | 134 | 5 | 21 | 245 | 7 | 251 | 3.03e-31 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1327440 | AT4G17720.1 | 67.910 | 268 | 83 | 2 | 17 | 281 | 1 | 268 | 2.05e-122 | 353 |
| Msa1327440 | AT5G46870.2 | 61.429 | 280 | 99 | 3 | 17 | 287 | 1 | 280 | 5.31e-110 | 321 |
| Msa1327440 | AT5G46870.1 | 61.429 | 280 | 99 | 3 | 17 | 287 | 1 | 280 | 5.31e-110 | 321 |
| Msa1327440 | AT5G16840.2 | 65.106 | 235 | 75 | 4 | 18 | 252 | 4 | 231 | 4.72e-102 | 299 |
| Msa1327440 | AT5G16840.1 | 65.106 | 235 | 74 | 5 | 18 | 252 | 4 | 230 | 2.18e-100 | 295 |
| Msa1327440 | AT5G16840.3 | 64.407 | 236 | 76 | 5 | 17 | 252 | 1 | 228 | 8.69e-100 | 293 |
| Msa1327440 | AT1G67950.3 | 52.766 | 235 | 101 | 2 | 19 | 253 | 28 | 252 | 1.30e-79 | 243 |
| Msa1327440 | AT1G67950.2 | 52.766 | 235 | 100 | 3 | 19 | 253 | 29 | 252 | 4.84e-78 | 239 |
| Msa1327440 | AT1G67950.1 | 52.766 | 235 | 100 | 3 | 19 | 253 | 28 | 251 | 5.58e-78 | 239 |
| Msa1327440 | AT5G32450.1 | 50.407 | 246 | 107 | 2 | 20 | 250 | 5 | 250 | 2.34e-74 | 229 |
| Msa1327440 | AT1G67950.4 | 49.754 | 203 | 91 | 3 | 51 | 253 | 1 | 192 | 1.01e-59 | 190 |
| Msa1327440 | AT1G14340.1 | 36.441 | 236 | 135 | 3 | 22 | 246 | 9 | 240 | 1.40e-40 | 141 |
| Msa1327440 | AT3G01210.2 | 32.520 | 246 | 132 | 5 | 23 | 244 | 9 | 244 | 1.46e-29 | 113 |
| Msa1327440 | AT3G01210.1 | 32.520 | 246 | 132 | 5 | 23 | 244 | 9 | 244 | 1.46e-29 | 113 |
Find 90 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACTTGTTGCTGCGGCTTT+TGG | 0.121118 | 8_4:+44816470 | None:intergenic |
| CTTGCGAAGGGATTTATCTT+AGG | 0.222166 | 8_4:-44816902 | Msa1327440:CDS |
| AGAAGTGGATCAGAAGTTTC+AGG | 0.297615 | 8_4:-44816732 | Msa1327440:CDS |
| AAGCGTAACGGCGTCGAAAC+TGG | 0.306350 | 8_4:+44821576 | None:intergenic |
| CAAACTTCCACCTGCTGCTT+TGG | 0.312762 | 8_4:-44817283 | Msa1327440:CDS |
| AATTGCCTTTGTTACTTTCA+AGG | 0.314569 | 8_4:-44820109 | Msa1327440:CDS |
| AGCAGCTGCAAATGCTGATT+TGG | 0.315915 | 8_4:+44816697 | None:intergenic |
| AAGCATATCATTTCCAACTT+TGG | 0.355824 | 8_4:+44816264 | None:intergenic |
| GTGGAAAATGAAGGATTATC+AGG | 0.361604 | 8_4:-44816143 | Msa1327440:three_prime_UTR |
| ACTGGTACTACCTGGGTAAC+TGG | 0.368921 | 8_4:-44816620 | Msa1327440:CDS |
| AATTTGCAGGAGTTTCAAAA+AGG | 0.375052 | 8_4:+44816384 | None:intergenic |
| AGAAACTGAATTTCCAAAGT+TGG | 0.404196 | 8_4:-44816277 | Msa1327440:three_prime_UTR |
| AAAAGTCGGTAATGTTTCCT+TGG | 0.410188 | 8_4:-44820330 | Msa1327440:CDS |
| AGTAAGGTTGCTAAGGCAGC+TGG | 0.411693 | 8_4:-44816590 | Msa1327440:CDS |
| AAAATGAAAAGAACTCCTTT+AGG | 0.412585 | 8_4:+44820291 | None:intergenic |
| TTGCGAAGGGATTTATCTTA+GGG | 0.414214 | 8_4:-44816901 | Msa1327440:CDS |
| CCGAGGCTGTTGAACTCAAC+TGG | 0.416921 | 8_4:+44816837 | None:intergenic |
| CTCACACTGAAACAATTTGC+AGG | 0.422823 | 8_4:+44816371 | None:intergenic |
| TTGAATATGTTGAAATGAAA+AGG | 0.433319 | 8_4:-44820259 | Msa1327440:intron |
| TTCCAAGCCTACACCTGCTC+AGG | 0.433849 | 8_4:-44816438 | Msa1327440:CDS |
| GCAGGTGGAAGTTTGTAATC+TGG | 0.442443 | 8_4:+44817291 | None:intergenic |
| CCAGTATGCGCAGGTCCTTT+CGG | 0.448214 | 8_4:-44816498 | Msa1327440:CDS |
| GACTATCGTCGTGGTGGTGG+TGG | 0.450512 | 8_4:+44821708 | None:intergenic |
| TTTGACTTTGAAACGCGTAC+TGG | 0.459422 | 8_4:+44821664 | None:intergenic |
| AAAGTCGGTAATGTTTCCTT+GGG | 0.468203 | 8_4:-44820329 | Msa1327440:CDS |
| GTGGTGCTGACTCTGCTTTA+CGG | 0.473735 | 8_4:-44816952 | Msa1327440:CDS |
| GCTAAGGCAGCTGGGGATGT+AGG | 0.476446 | 8_4:-44816581 | Msa1327440:CDS |
| TACACAAGGGTGGAAAATGA+AGG | 0.479815 | 8_4:-44816152 | Msa1327440:three_prime_UTR |
| CCGAAAGGACCTGCGCATAC+TGG | 0.482179 | 8_4:+44816498 | None:intergenic |
| TTTGTCAGTTAACATAACTC+TGG | 0.492790 | 8_4:-44817316 | Msa1327440:CDS |
| CGATAGTAGTACTGCCGTCT+CGG | 0.498280 | 8_4:+44820074 | None:intergenic |
| ACCCTGAGCAGGTGTAGGCT+TGG | 0.499327 | 8_4:+44816436 | None:intergenic |
| ACAGATGATGCCAAAGCAGC+AGG | 0.499671 | 8_4:+44817273 | None:intergenic |
| ACAGAAAACAAAAGAGAAAG+TGG | 0.508009 | 8_4:-44816558 | Msa1327440:CDS |
| GCCGCTGAGGGTAAAACTCC+TGG | 0.513612 | 8_4:-44816974 | Msa1327440:CDS |
| CAAAGGATCAAACCCTGAGC+AGG | 0.517360 | 8_4:+44816425 | None:intergenic |
| GGGAGTGTATGATGCAGAGA+TGG | 0.521358 | 8_4:-44820414 | Msa1327440:exon |
| ATATACTCACTGGTACTACC+TGG | 0.533676 | 8_4:-44816628 | Msa1327440:CDS |
| GAACAGAAAGTCAGTACCGC+AGG | 0.537626 | 8_4:-44816674 | Msa1327440:CDS |
| TTCGACTATCGTCGTGGTGG+TGG | 0.541199 | 8_4:+44821705 | None:intergenic |
| TTTACGGAAGGCAGAGGATG+TGG | 0.541227 | 8_4:-44816936 | Msa1327440:CDS |
| AGCATCTGAACAAGACCTAA+AGG | 0.544372 | 8_4:-44820306 | Msa1327440:CDS |
| GAAAGTGGAAAATGCAGAAG+TGG | 0.544685 | 8_4:-44816543 | Msa1327440:CDS |
| GTAAGGTTGCTAAGGCAGCT+GGG | 0.546936 | 8_4:-44816589 | Msa1327440:CDS |
| GTCTTGTTCAGATGCTCCCA+AGG | 0.552262 | 8_4:+44820313 | None:intergenic |
| TTACGCTTCTTCTGATATGT+CGG | 0.553543 | 8_4:-44821561 | Msa1327440:intron |
| CTCTGCTTTACGGAAGGCAG+AGG | 0.563214 | 8_4:-44816942 | Msa1327440:CDS |
| TCCAAGCCTACACCTGCTCA+GGG | 0.564645 | 8_4:-44816437 | Msa1327440:CDS |
| CCAGTTGAGTTCAACAGCCT+CGG | 0.565333 | 8_4:-44816837 | Msa1327440:CDS |
| AAATCCCTTCGCAAGCATGC+TGG | 0.567408 | 8_4:+44816910 | None:intergenic |
| CAGGTCAAAACTATAAAAGT+CGG | 0.570204 | 8_4:-44820344 | Msa1327440:CDS |
| GATGCTGTGAACAAAGCAAA+GGG | 0.570764 | 8_4:-44816875 | Msa1327440:CDS |
| GAGTGGTAGAGTTAAAGAAG+TGG | 0.581041 | 8_4:-44816747 | Msa1327440:CDS |
| AAGAATCGCTATATACTCAC+TGG | 0.582491 | 8_4:-44816638 | Msa1327440:CDS |
| AAAGCAGAGTCAGCACCACC+AGG | 0.583320 | 8_4:+44816956 | None:intergenic |
| GGATCCACAAGGTGCCGAGA+CGG | 0.588318 | 8_4:-44820088 | Msa1327440:CDS |
| TGCTGACTCTGCTTTACGGA+AGG | 0.591242 | 8_4:-44816948 | Msa1327440:CDS |
| GTCACCAGCATGCTTGCGAA+GGG | 0.591713 | 8_4:-44816914 | Msa1327440:CDS |
| AGATGCTGTGAACAAAGCAA+AGG | 0.591752 | 8_4:-44816876 | Msa1327440:CDS |
| ACTGCCGTCTCGGCACCTTG+TGG | 0.593659 | 8_4:+44820084 | None:intergenic |
| GGAGTGTATGATGCAGAGAT+GGG | 0.598932 | 8_4:-44820413 | Msa1327440:exon |
| AGTTGAAGACCAGTATGCGC+AGG | 0.604810 | 8_4:-44816507 | Msa1327440:CDS |
| TGGATCCTTGAAAGTAACAA+AGG | 0.609650 | 8_4:+44820104 | None:intergenic |
| GCAGAGATGGGTTCTCCACA+AGG | 0.610522 | 8_4:-44820401 | Msa1327440:exon |
| AGTGTTAGATATCAGACCAC+GGG | 0.611841 | 8_4:-44820434 | Msa1327440:five_prime_UTR |
| ATGTACAAGAAGTAAATCAA+AGG | 0.612134 | 8_4:+44816408 | None:intergenic |
| CTTAGTGAGAAATTAACTGC+TGG | 0.614592 | 8_4:-44816782 | Msa1327440:CDS |
| AACTGGGGTGTGTGTTTGAG+AGG | 0.619779 | 8_4:+44821593 | None:intergenic |
| ACTAAAAGCACCAGTTACCC+AGG | 0.621013 | 8_4:+44816610 | None:intergenic |
| TATACTCACTGGTACTACCT+GGG | 0.629105 | 8_4:-44816627 | Msa1327440:CDS |
| GATGATGCCAAAGCAGCAGG+TGG | 0.631195 | 8_4:+44817276 | None:intergenic |
| TAAGGTTGCTAAGGCAGCTG+GGG | 0.631391 | 8_4:-44816588 | Msa1327440:CDS |
| CTCTGCATCATACACTCCCG+TGG | 0.634900 | 8_4:+44820418 | None:intergenic |
| GTGCAGTTCACTTGTTGCTG+CGG | 0.638692 | 8_4:+44816463 | None:intergenic |
| CGAGACGGCAGTACTACTAT+CGG | 0.643990 | 8_4:-44820073 | Msa1327440:intron |
| ATCAAACCCTGAGCAGGTGT+AGG | 0.644936 | 8_4:+44816431 | None:intergenic |
| ACTGAACGTTTAGAACCTTG+TGG | 0.645991 | 8_4:+44820386 | None:intergenic |
| GTTTGAGAGGATGAAGAAAA+CGG | 0.647479 | 8_4:+44821606 | None:intergenic |
| GTTACTTTCAAGGATCCACA+AGG | 0.648181 | 8_4:-44820099 | Msa1327440:CDS |
| GCGTAACGGCGTCGAAACTG+GGG | 0.651779 | 8_4:+44821578 | None:intergenic |
| ACATATCAGAAGAAGCGTAA+CGG | 0.662837 | 8_4:+44821564 | None:intergenic |
| AACAGAAAGTCAGTACCGCA+GGG | 0.666312 | 8_4:-44816673 | Msa1327440:CDS |
| AAGAACAATCTCAAAGCATG+CGG | 0.686734 | 8_4:+44820458 | None:intergenic |
| AAGTGTTAGATATCAGACCA+CGG | 0.687790 | 8_4:-44820435 | Msa1327440:five_prime_UTR |
| GCTGAGGGTAAAACTCCTGG+TGG | 0.693763 | 8_4:-44816971 | Msa1327440:CDS |
| CGTGCTTTCGACTATCGTCG+TGG | 0.698859 | 8_4:+44821699 | None:intergenic |
| AAAAGATGTAACTTTCGCCG+AGG | 0.709369 | 8_4:+44816820 | None:intergenic |
| GCTGGTGCATCAGTTGTGAG+TGG | 0.711756 | 8_4:-44816764 | Msa1327440:CDS |
| GCTTTCGACTATCGTCGTGG+TGG | 0.732645 | 8_4:+44821702 | None:intergenic |
| CTTCATTATAGCAGACCCTG+CGG | 0.733885 | 8_4:+44816658 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACATAAGAATTAATAAAAA+GGG | + | chr8_4:44817333-44817352 | None:intergenic | 10.0% |
| !! | TTACATAAGAATTAATAAAA+AGG | + | chr8_4:44817334-44817353 | None:intergenic | 10.0% |
| !! | GTATAATAAAACTTAATAAT+GGG | + | chr8_4:44817669-44817688 | None:intergenic | 10.0% |
| !! | TGTATAATAAAACTTAATAA+TGG | + | chr8_4:44817670-44817689 | None:intergenic | 10.0% |
| !! | ATATATCAATTAGATTAATA+CGG | + | chr8_4:44819075-44819094 | None:intergenic | 10.0% |
| !!! | TTTTTTATATATATAATTGC+TGG | + | chr8_4:44820475-44820494 | None:intergenic | 10.0% |
| !!! | AAAATTTTATTTTTACACAA+GGG | - | chr8_4:44821692-44821711 | Msa1327440:five_prime_UTR | 10.0% |
| !! | TTAAATGCAATATCAAAAAA+GGG | + | chr8_4:44817021-44817040 | None:intergenic | 15.0% |
| !! | TTTAAATGCAATATCAAAAA+AGG | + | chr8_4:44817022-44817041 | None:intergenic | 15.0% |
| !! | ATACTAATAGTATAGTTATA+AGG | - | chr8_4:44817047-44817066 | Msa1327440:intron | 15.0% |
| !! | ATCTATTAATTCTTATGTAA+AGG | - | chr8_4:44817135-44817154 | Msa1327440:intron | 15.0% |
| !! | TCTATTAATTCTTATGTAAA+GGG | - | chr8_4:44817136-44817155 | Msa1327440:intron | 15.0% |
| !! | AGTATAAAATTGAATGAAAA+AGG | + | chr8_4:44819022-44819041 | None:intergenic | 15.0% |
| !! | GAACAAATAAAATAGTTTAT+CGG | + | chr8_4:44819138-44819157 | None:intergenic | 15.0% |
| !! | TCAGATTTAATATAAATTGA+AGG | - | chr8_4:44819934-44819953 | Msa1327440:intron | 15.0% |
| !! | CAGATTTAATATAAATTGAA+GGG | - | chr8_4:44819935-44819954 | Msa1327440:intron | 15.0% |
| !! | AGATTTAATATAAATTGAAG+GGG | - | chr8_4:44819936-44819955 | Msa1327440:intron | 15.0% |
| !!! | TCTGATTTATCTTTTTATTT+GGG | - | chr8_4:44820127-44820146 | Msa1327440:CDS | 15.0% |
| !! | TTAATAATACTAATCATTGA+AGG | - | chr8_4:44820342-44820361 | Msa1327440:CDS | 15.0% |
| !!! | AAATATTACACATTTGTTAT+AGG | + | chr8_4:44820858-44820877 | None:intergenic | 15.0% |
| !!! | GAAAATTTTATTTTTACACA+AGG | - | chr8_4:44821691-44821710 | Msa1327440:five_prime_UTR | 15.0% |
| !! | TTTAAATGTAAAACAAAGAC+CGG | + | chr8_4:44816582-44816601 | None:intergenic | 20.0% |
| !!! | AAATAGAACTATTTGAAATG+TGG | - | chr8_4:44816627-44816646 | Msa1327440:CDS | 20.0% |
| !! | AATAAAAAAAATGCAATGAG+TGG | - | chr8_4:44817086-44817105 | Msa1327440:intron | 20.0% |
| !! | CTATTAATTCTTATGTAAAG+GGG | - | chr8_4:44817137-44817156 | Msa1327440:intron | 20.0% |
| !!! | CTATTATTACTTTTAGTCAT+AGG | - | chr8_4:44817363-44817382 | Msa1327440:intron | 20.0% |
| !! | TTGAATATGTTGAAATGAAA+AGG | - | chr8_4:44817598-44817617 | Msa1327440:intron | 20.0% |
| !! | GTAATGAATATATGATTCTT+TGG | + | chr8_4:44817917-44817936 | None:intergenic | 20.0% |
| !! | TATATTATATGTCTGATTCA+TGG | - | chr8_4:44818733-44818752 | Msa1327440:intron | 20.0% |
| !! | ATATTATATGTCTGATTCAT+GGG | - | chr8_4:44818734-44818753 | Msa1327440:intron | 20.0% |
| !! | AGGATTGAGAATAATAAAAT+AGG | - | chr8_4:44818911-44818930 | Msa1327440:intron | 20.0% |
| !! | GGATTGAGAATAATAAAATA+GGG | - | chr8_4:44818912-44818931 | Msa1327440:intron | 20.0% |
| !!! | AGTTTTTAGTTAAGTTTTTG+TGG | + | chr8_4:44819453-44819472 | None:intergenic | 20.0% |
| !! | ACAAAAACTTAACTAAAAAC+TGG | - | chr8_4:44819452-44819471 | Msa1327440:intron | 20.0% |
| !! | TTAAACCTCTTATAAAAGAT+TGG | + | chr8_4:44819524-44819543 | None:intergenic | 20.0% |
| !!! | TTATATCTAACACTATTTTC+CGG | - | chr8_4:44819635-44819654 | Msa1327440:intron | 20.0% |
| !!! | ATTATCAAAGTTGATCTTTT+TGG | - | chr8_4:44819789-44819808 | Msa1327440:intron | 20.0% |
| !!! | GTCTGATTTATCTTTTTATT+TGG | - | chr8_4:44820126-44820145 | Msa1327440:CDS | 20.0% |
| !!! | ATTTGATGCATGTATATTTT+TGG | - | chr8_4:44820402-44820421 | Msa1327440:exon | 20.0% |
| !!! | ACAAATGTGTAATATTTTTC+AGG | - | chr8_4:44820861-44820880 | Msa1327440:intron | 20.0% |
| ! | TTAAATGTAAAACAAAGACC+GGG | + | chr8_4:44816581-44816600 | None:intergenic | 25.0% |
| !!! | TTATCTTACTGATTTACACA+TGG | - | chr8_4:44816663-44816682 | Msa1327440:CDS | 25.0% |
| ! | AGTATCAGTTAGTTAAAATC+GGG | + | chr8_4:44816818-44816837 | None:intergenic | 25.0% |
| ! | CAGTATCAGTTAGTTAAAAT+CGG | + | chr8_4:44816819-44816838 | None:intergenic | 25.0% |
| ! | AAGAAAGCAATAAATGACAA+AGG | + | chr8_4:44816948-44816967 | None:intergenic | 25.0% |
| !!! | GTTACATGTATTTTATTTGC+AGG | - | chr8_4:44817494-44817513 | Msa1327440:intron | 25.0% |
| ! | AAAATGAAAAGAACTCCTTT+AGG | + | chr8_4:44817569-44817588 | None:intergenic | 25.0% |
| ! | TAATATATGTGTATCATGCA+TGG | - | chr8_4:44817833-44817852 | Msa1327440:intron | 25.0% |
| ! | ATATTCATTACTGAGATTTC+AGG | - | chr8_4:44817926-44817945 | Msa1327440:intron | 25.0% |
| ! | TATTCATTACTGAGATTTCA+GGG | - | chr8_4:44817927-44817946 | Msa1327440:intron | 25.0% |
| ! | AGAAAACTGATATTTACTTG+AGG | - | chr8_4:44818052-44818071 | Msa1327440:intron | 25.0% |
| ! | CATGTTTATGTGAAATGAAT+AGG | + | chr8_4:44818454-44818473 | None:intergenic | 25.0% |
| ! | GAATCTATATCATAAGAAAG+AGG | + | chr8_4:44818555-44818574 | None:intergenic | 25.0% |
| ! | AAATCTCAGAATTTCAGATA+CGG | + | chr8_4:44818577-44818596 | None:intergenic | 25.0% |
| ! | TATTATATGTCTGATTCATG+GGG | - | chr8_4:44818735-44818754 | Msa1327440:intron | 25.0% |
| !!! | TTATTTTTCAGCACAAAGTA+GGG | + | chr8_4:44818822-44818841 | None:intergenic | 25.0% |
| !! | TTCAATTTTATACTCCCTAA+AGG | - | chr8_4:44819028-44819047 | Msa1327440:intron | 25.0% |
| !!! | TGTTCTATTTTGATAGAAAC+TGG | - | chr8_4:44819153-44819172 | Msa1327440:intron | 25.0% |
| ! | TATTCAGTTATATATCCTAC+TGG | + | chr8_4:44819181-44819200 | None:intergenic | 25.0% |
| ! | ACTGTATTACTGTATATTCT+CGG | - | chr8_4:44819204-44819223 | Msa1327440:intron | 25.0% |
| ! | AAGTTATTAAGTGGTTGATT+GGG | + | chr8_4:44819335-44819354 | None:intergenic | 25.0% |
| ! | AGCAAGAATAAAAAGGAAAA+GGG | + | chr8_4:44819380-44819399 | None:intergenic | 25.0% |
| ! | TAGCAAGAATAAAAAGGAAA+AGG | + | chr8_4:44819381-44819400 | None:intergenic | 25.0% |
| !! | TCTTATAAAAGATTGGCTAT+AGG | + | chr8_4:44819517-44819536 | None:intergenic | 25.0% |
| !! | TATAGCCAATCTTTTATAAG+AGG | - | chr8_4:44819516-44819535 | Msa1327440:intron | 25.0% |
| ! | AACATCTTCTCTTAATATAG+AGG | - | chr8_4:44819542-44819561 | Msa1327440:intron | 25.0% |
| ! | GTTGCTTAATCTTTATGTTA+TGG | - | chr8_4:44819766-44819785 | Msa1327440:intron | 25.0% |
| !! | TTTTATCTTAAAGCAGTGAA+GGG | + | chr8_4:44819863-44819882 | None:intergenic | 25.0% |
| !! | ATTTTATCTTAAAGCAGTGA+AGG | + | chr8_4:44819864-44819883 | None:intergenic | 25.0% |
| !!! | ACACTAGTTGTCTTATTTTT+GGG | - | chr8_4:44820027-44820046 | Msa1327440:intron | 25.0% |
| ! | AAATTGAAAAGAATAGCCTT+TGG | - | chr8_4:44820063-44820082 | Msa1327440:intron | 25.0% |
| ! | AATAAGTTTACCAACATAGT+AGG | + | chr8_4:44820210-44820229 | None:intergenic | 25.0% |
| ! | TCCTTAAAATAGCATCAAAT+TGG | - | chr8_4:44820291-44820310 | Msa1327440:CDS | 25.0% |
| !!! | ACCAATTTGATGCTATTTTA+AGG | + | chr8_4:44820295-44820314 | None:intergenic | 25.0% |
| ! | AAGAAACAAGACACTTAATT+TGG | + | chr8_4:44820432-44820451 | None:intergenic | 25.0% |
| ! | TTTGGATAAGTGGTATAATA+TGG | - | chr8_4:44820649-44820668 | Msa1327440:intron | 25.0% |
| ! | GAAATGAATATCCTAGTTAA+TGG | + | chr8_4:44820771-44820790 | None:intergenic | 25.0% |
| ! | GATATTCATTTCATCCTATT+CGG | - | chr8_4:44820779-44820798 | Msa1327440:intron | 25.0% |
| ! | ATGTACAAGAAGTAAATCAA+AGG | + | chr8_4:44821452-44821471 | None:intergenic | 25.0% |
| ! | AGTCTATGGAGAAAAATATA+AGG | - | chr8_4:44821633-44821652 | Msa1327440:five_prime_UTR | 25.0% |
| ! | GTCTATGGAGAAAAATATAA+GGG | - | chr8_4:44821634-44821653 | Msa1327440:five_prime_UTR | 25.0% |
| !!! | ATTTTATTTTTACACAAGGG+TGG | - | chr8_4:44821695-44821714 | Msa1327440:five_prime_UTR | 25.0% |
| CTGATATAAGAAGAGTAAGA+CGG | + | chr8_4:44816391-44816410 | None:intergenic | 30.0% | |
| TCTTCTTATATCAGACTGTT+TGG | - | chr8_4:44816397-44816416 | Msa1327440:three_prime_UTR | 30.0% | |
| TCGTAGAACTTATGCAAATA+AGG | + | chr8_4:44816460-44816479 | None:intergenic | 30.0% | |
| TAAATGTAAAACAAAGACCG+GGG | + | chr8_4:44816580-44816599 | None:intergenic | 30.0% | |
| ! | ACTATTTGAAATGTGGTTTG+AGG | - | chr8_4:44816634-44816653 | Msa1327440:CDS | 30.0% |
| !! | CATGGATTTTGAGTGATTTA+AGG | - | chr8_4:44816681-44816700 | Msa1327440:CDS | 30.0% |
| TAAAATCGTAAATCGTGCAA+TGG | + | chr8_4:44816786-44816805 | None:intergenic | 30.0% | |
| !!! | CGATTTTAACTAACTGATAC+TGG | - | chr8_4:44816817-44816836 | Msa1327440:CDS | 30.0% |
| AACCTCGTGTATAAAAAACA+GGG | - | chr8_4:44817228-44817247 | Msa1327440:intron | 30.0% | |
| AATTAATAAAAAGGGCAACC+CGG | + | chr8_4:44817325-44817344 | None:intergenic | 30.0% | |
| CAGGTCAAAACTATAAAAGT+CGG | - | chr8_4:44817513-44817532 | Msa1327440:intron | 30.0% | |
| ! | AAGGAGTTCTTTTCATTTTC+TGG | - | chr8_4:44817570-44817589 | Msa1327440:intron | 30.0% |
| !! | AATTGCCTTTGTTACTTTCA+AGG | - | chr8_4:44817748-44817767 | Msa1327440:intron | 30.0% |
| CAATCCAAGACAAATTGATT+GGG | + | chr8_4:44817890-44817909 | None:intergenic | 30.0% | |
| ACAATCCAAGACAAATTGAT+TGG | + | chr8_4:44817891-44817910 | None:intergenic | 30.0% | |
| ! | GTGTGTCATTATCCTAATAA+AGG | - | chr8_4:44817967-44817986 | Msa1327440:intron | 30.0% |
| !!! | AGTTGACTTGTTTAGCTTTT+TGG | - | chr8_4:44818000-44818019 | Msa1327440:intron | 30.0% |
| ! | AAACTGATAATGCAGCATAA+GGG | - | chr8_4:44818098-44818117 | Msa1327440:intron | 30.0% |
| AGGATACTTATCACCAAAAA+AGG | + | chr8_4:44818172-44818191 | None:intergenic | 30.0% | |
| ! | TTTCATTTTGTCAACACCAA+GGG | - | chr8_4:44818517-44818536 | Msa1327440:intron | 30.0% |
| ACCAACTATCACAAAAACTT+AGG | - | chr8_4:44818684-44818703 | Msa1327440:intron | 30.0% | |
| ATCACAAAAACTTAGGCTAT+TGG | - | chr8_4:44818691-44818710 | Msa1327440:intron | 30.0% | |
| TCACAAAAACTTAGGCTATT+GGG | - | chr8_4:44818692-44818711 | Msa1327440:intron | 30.0% | |
| !!! | GTTATTTTTCAGCACAAAGT+AGG | + | chr8_4:44818823-44818842 | None:intergenic | 30.0% |
| ! | ACTCTTATTTAGACCAATAG+AGG | - | chr8_4:44818841-44818860 | Msa1327440:intron | 30.0% |
| AGATTGAACTCTAGATCAAA+TGG | - | chr8_4:44818870-44818889 | Msa1327440:intron | 30.0% | |
| ACGGAGAATAATGATAGAAA+GGG | + | chr8_4:44819056-44819075 | None:intergenic | 30.0% | |
| TACGGAGAATAATGATAGAA+AGG | + | chr8_4:44819057-44819076 | None:intergenic | 30.0% | |
| AGTTTATCGGTATATCAGTT+TGG | + | chr8_4:44819125-44819144 | None:intergenic | 30.0% | |
| GAAGTTATTAAGTGGTTGAT+TGG | + | chr8_4:44819336-44819355 | None:intergenic | 30.0% | |
| GTTGTCTAGAAGTTATTAAG+TGG | + | chr8_4:44819344-44819363 | None:intergenic | 30.0% | |
| TGTGGTTAGCAAGAATAAAA+AGG | + | chr8_4:44819387-44819406 | None:intergenic | 30.0% | |
| ATGTTTGTCAATTATGTGTG+TGG | + | chr8_4:44819405-44819424 | None:intergenic | 30.0% | |
| ! | ACTTAACTAAAAACTGGCTT+TGG | - | chr8_4:44819458-44819477 | Msa1327440:intron | 30.0% |
| ! | TATAAAAGATTGGCTATAGG+AGG | + | chr8_4:44819514-44819533 | None:intergenic | 30.0% |
| ! | AGTCAATAGCTTAAGCTTTT+GGG | + | chr8_4:44819596-44819615 | None:intergenic | 30.0% |
| ! | CTATTTTCCGGCAATTTTAT+TGG | - | chr8_4:44819647-44819666 | Msa1327440:intron | 30.0% |
| TGCATATCCAATAAAATTGC+CGG | + | chr8_4:44819657-44819676 | None:intergenic | 30.0% | |
| ACCAACTAAGTATACCAAAT+AGG | + | chr8_4:44819686-44819705 | None:intergenic | 30.0% | |
| AAATAAGACAACTAGTGTCT+AGG | + | chr8_4:44820025-44820044 | None:intergenic | 30.0% | |
| !!! | GACACTAGTTGTCTTATTTT+TGG | - | chr8_4:44820026-44820045 | Msa1327440:intron | 30.0% |
| ! | CTATGTTGGTAAACTTATTC+TGG | - | chr8_4:44820211-44820230 | Msa1327440:intron | 30.0% |
| TGATATCATTCACTGCTAAA+TGG | - | chr8_4:44820372-44820391 | Msa1327440:CDS | 30.0% | |
| !! | GTGTCTTGTTTCTTTAATGT+AGG | - | chr8_4:44820438-44820457 | Msa1327440:five_prime_UTR | 30.0% |
| !! | ACCAAGTTTTTCAACATATC+AGG | - | chr8_4:44820502-44820521 | Msa1327440:intron | 30.0% |
| !! | CCAAGTTTTTCAACATATCA+GGG | - | chr8_4:44820503-44820522 | Msa1327440:intron | 30.0% |
| !! | CAAGTTTTTCAACATATCAG+GGG | - | chr8_4:44820504-44820523 | Msa1327440:intron | 30.0% |
| !! | AAGTTTTTCAACATATCAGG+GGG | - | chr8_4:44820505-44820524 | Msa1327440:intron | 30.0% |
| TTTGTCAGTTAACATAACTC+TGG | - | chr8_4:44820541-44820560 | Msa1327440:intron | 30.0% | |
| ! | ATGTTTGGAATGGTGATATA+AGG | + | chr8_4:44820747-44820766 | None:intergenic | 30.0% |
| AGTTAATGGTATGTTTGGAA+TGG | + | chr8_4:44820757-44820776 | None:intergenic | 30.0% | |
| TTCCAAACATACCATTAACT+AGG | - | chr8_4:44820757-44820776 | Msa1327440:intron | 30.0% | |
| ATCCTAGTTAATGGTATGTT+TGG | + | chr8_4:44820762-44820781 | None:intergenic | 30.0% | |
| GGCAAAAATATCCTAGTTAA+TGG | + | chr8_4:44820837-44820856 | None:intergenic | 30.0% | |
| ! | ACATCTTTTGACCAAAAACT+TGG | - | chr8_4:44821051-44821070 | Msa1327440:intron | 30.0% |
| ! | CATCTTTTGACCAAAAACTT+GGG | - | chr8_4:44821052-44821071 | Msa1327440:intron | 30.0% |
| ACAGAAAACAAAAGAGAAAG+TGG | - | chr8_4:44821299-44821318 | Msa1327440:intron | 30.0% | |
| AATTTGCAGGAGTTTCAAAA+AGG | + | chr8_4:44821476-44821495 | None:intergenic | 30.0% | |
| ! | GACAGATTTTACTAGTTACT+TGG | - | chr8_4:44821518-44821537 | Msa1327440:intron | 30.0% |
| AGAAACTGAATTTCCAAAGT+TGG | - | chr8_4:44821580-44821599 | Msa1327440:five_prime_UTR | 30.0% | |
| AAGCATATCATTTCCAACTT+TGG | + | chr8_4:44821596-44821615 | None:intergenic | 30.0% | |
| ! | TTTTTCTCCATAGACTGAAT+GGG | + | chr8_4:44821629-44821648 | None:intergenic | 30.0% |
| ! | ATTTTTCTCCATAGACTGAA+TGG | + | chr8_4:44821630-44821649 | None:intergenic | 30.0% |
| TGGAGAAAAATATAAGGGAA+TGG | - | chr8_4:44821639-44821658 | Msa1327440:five_prime_UTR | 30.0% | |
| GTTTGAGAGGATGAAGAAAA+CGG | + | chr8_4:44816254-44816273 | None:intergenic | 35.0% | |
| ! | ACATATCAGAAGAAGCGTAA+CGG | + | chr8_4:44816296-44816315 | None:intergenic | 35.0% |
| TTACGCTTCTTCTGATATGT+CGG | - | chr8_4:44816296-44816315 | Msa1327440:three_prime_UTR | 35.0% | |
| AAATGTAAAACAAAGACCGG+GGG | + | chr8_4:44816579-44816598 | None:intergenic | 35.0% | |
| CAATAAATGACAAAGGAGAC+AGG | + | chr8_4:44816941-44816960 | None:intergenic | 35.0% | |
| TCACATGACAACAACTTTAC+CGG | + | chr8_4:44817177-44817196 | None:intergenic | 35.0% | |
| TCATGTGACTTAAACGTCAT+AGG | - | chr8_4:44817189-44817208 | Msa1327440:intron | 35.0% | |
| CAACCTCGTGTATAAAAAAC+AGG | - | chr8_4:44817227-44817246 | Msa1327440:intron | 35.0% | |
| !!! | TACCCTGTTTTTTATACACG+AGG | + | chr8_4:44817233-44817252 | None:intergenic | 35.0% |
| CGTGTATAAAAAACAGGGTA+AGG | - | chr8_4:44817233-44817252 | Msa1327440:intron | 35.0% | |
| ! | ACTTTTAGTCATAGGAGTCT+AGG | - | chr8_4:44817371-44817390 | Msa1327440:intron | 35.0% |
| AAGAACAATCTCAAAGCATG+CGG | + | chr8_4:44817402-44817421 | None:intergenic | 35.0% | |
| AAGTGTTAGATATCAGACCA+CGG | - | chr8_4:44817422-44817441 | Msa1327440:intron | 35.0% | |
| AAAAGTCGGTAATGTTTCCT+TGG | - | chr8_4:44817527-44817546 | Msa1327440:intron | 35.0% | |
| AAAGTCGGTAATGTTTCCTT+GGG | - | chr8_4:44817528-44817547 | Msa1327440:intron | 35.0% | |
| TGGATCCTTGAAAGTAACAA+AGG | + | chr8_4:44817756-44817775 | None:intergenic | 35.0% | |
| ATTAGCTGATGATCAATGTC+AGG | + | chr8_4:44817817-44817836 | None:intergenic | 35.0% | |
| AAGCTAAACAAGTCAACTCA+AGG | + | chr8_4:44817998-44818017 | None:intergenic | 35.0% | |
| ! | GAAACTGATAATGCAGCATA+AGG | - | chr8_4:44818097-44818116 | Msa1327440:intron | 35.0% |
| ACTTATCACCAAAAAAGGCA+GGG | + | chr8_4:44818167-44818186 | None:intergenic | 35.0% | |
| TACTTATCACCAAAAAAGGC+AGG | + | chr8_4:44818168-44818187 | None:intergenic | 35.0% | |
| AAATGAACGAGATCAAATGC+TGG | + | chr8_4:44818292-44818311 | None:intergenic | 35.0% | |
| ! | TATGTCTCAGCTACTTTCTT+AGG | - | chr8_4:44818404-44818423 | Msa1327440:intron | 35.0% |
| ! | AGCTACTTTCTTAGGCATTT+AGG | - | chr8_4:44818412-44818431 | Msa1327440:intron | 35.0% |
| TGCACAATATGAACTAACAG+TGG | + | chr8_4:44818490-44818509 | None:intergenic | 35.0% | |
| ! | GTGTTGACAAAATGAAACAG+AGG | + | chr8_4:44818514-44818533 | None:intergenic | 35.0% |
| ! | GTTTCATTTTGTCAACACCA+AGG | - | chr8_4:44818516-44818535 | Msa1327440:intron | 35.0% |
| TAAACATCACACATCAGGTT+TGG | - | chr8_4:44818612-44818631 | Msa1327440:intron | 35.0% | |
| ! | GCCTAAGTTTTTGTGATAGT+TGG | + | chr8_4:44818688-44818707 | None:intergenic | 35.0% |
| TCAATCTCTGTTTCCTCTAT+TGG | + | chr8_4:44818857-44818876 | None:intergenic | 35.0% | |
| AAGAAAGAATTCTCCACCAA+GGG | - | chr8_4:44818993-44819012 | Msa1327440:intron | 35.0% | |
| TGAATGAAAAAGGAAACCCT+TGG | + | chr8_4:44819012-44819031 | None:intergenic | 35.0% | |
| GGAGAATAATGATAGAAAGG+GGG | + | chr8_4:44819054-44819073 | None:intergenic | 35.0% | |
| CGGAGAATAATGATAGAAAG+GGG | + | chr8_4:44819055-44819074 | None:intergenic | 35.0% | |
| GTATTACTGTATATTCTCGG+AGG | - | chr8_4:44819207-44819226 | Msa1327440:intron | 35.0% | |
| CTGTTGTGTATGTCAGATTT+GGG | + | chr8_4:44819240-44819259 | None:intergenic | 35.0% | |
| TCTGTTGTGTATGTCAGATT+TGG | + | chr8_4:44819241-44819260 | None:intergenic | 35.0% | |
| ACAGAATTGAAAAGTTCCAC+AGG | - | chr8_4:44819256-44819275 | Msa1327440:intron | 35.0% | |
| AGAATCAAGCTCTTGAAACT+TGG | + | chr8_4:44819306-44819325 | None:intergenic | 35.0% | |
| TATTAAGTGGTTGATTGGGA+AGG | + | chr8_4:44819331-44819350 | None:intergenic | 35.0% | |
| ! | CAGTCAATAGCTTAAGCTTT+TGG | + | chr8_4:44819597-44819616 | None:intergenic | 35.0% |
| GCCTATTTGGTATACTTAGT+TGG | - | chr8_4:44819682-44819701 | Msa1327440:intron | 35.0% | |
| TGCTACTAGAACTAGAAGAA+TGG | - | chr8_4:44819891-44819910 | Msa1327440:intron | 35.0% | |
| GCTACTAGAACTAGAAGAAT+GGG | - | chr8_4:44819892-44819911 | Msa1327440:intron | 35.0% | |
| GCAACATATCATACTTCCAA+AGG | + | chr8_4:44820082-44820101 | None:intergenic | 35.0% | |
| TTGTTGACATCCTACTATGT+TGG | - | chr8_4:44820197-44820216 | Msa1327440:intron | 35.0% | |
| ATGTCACTGATATCTATGAG+AGG | + | chr8_4:44820254-44820273 | None:intergenic | 35.0% | |
| AAATAGCATCAAATTGGTCC+TGG | - | chr8_4:44820297-44820316 | Msa1327440:CDS | 35.0% | |
| CCCTGATATGTTGAAAAACT+TGG | + | chr8_4:44820506-44820525 | None:intergenic | 35.0% | |
| TTAACTAGAGGGTCTTTACA+AGG | + | chr8_4:44820613-44820632 | None:intergenic | 35.0% | |
| ATGAACTCATGTCATCCTAT+TGG | - | chr8_4:44820712-44820731 | Msa1327440:intron | 35.0% | |
| TGAACTCATGTCATCCTATT+GGG | - | chr8_4:44820713-44820732 | Msa1327440:intron | 35.0% | |
| ! | TTTGGAATGGTGATATAAGG+TGG | + | chr8_4:44820744-44820763 | None:intergenic | 35.0% |
| ! | TTTGGAATGGTGATATAAGG+TGG | + | chr8_4:44820744-44820763 | None:intergenic | 35.0% |
| ! | GTGTTTGGAATGGTGATATA+AGG | + | chr8_4:44820813-44820832 | None:intergenic | 35.0% |
| AGTTAATGGTGTGTTTGGAA+TGG | + | chr8_4:44820823-44820842 | None:intergenic | 35.0% | |
| TTCCAAACACACCATTAACT+AGG | - | chr8_4:44820823-44820842 | Msa1327440:intron | 35.0% | |
| ATCCTAGTTAATGGTGTGTT+TGG | + | chr8_4:44820828-44820847 | None:intergenic | 35.0% | |
| TTGCGAAGGGATTTATCTTA+GGG | - | chr8_4:44820956-44820975 | Msa1327440:intron | 35.0% | |
| CTTAGTGAGAAATTAACTGC+TGG | - | chr8_4:44821075-44821094 | Msa1327440:intron | 35.0% | |
| AAGAATCGCTATATACTCAC+TGG | - | chr8_4:44821219-44821238 | Msa1327440:intron | 35.0% | |
| ! | TGCTTTTAGTAAGGTTGCTA+AGG | - | chr8_4:44821260-44821279 | Msa1327440:intron | 35.0% |
| GTGGAAAATGAAGGATTATC+AGG | - | chr8_4:44821714-44821733 | Msa1327440:five_prime_UTR | 35.0% | |
| !! | TTTGACTTTGAAACGCGTAC+TGG | + | chr8_4:44816196-44816215 | None:intergenic | 40.0% |
| CTAGGAGGAGCAAGATTTAT+GGG | + | chr8_4:44816366-44816385 | None:intergenic | 40.0% | |
| TCTAGGAGGAGCAAGATTTA+TGG | + | chr8_4:44816367-44816386 | None:intergenic | 40.0% | |
| AAGAAGAGTAAGACGGATCT+AGG | + | chr8_4:44816384-44816403 | None:intergenic | 40.0% | |
| ! | TGATACTGGCTGATCAAGTT+AGG | - | chr8_4:44816831-44816850 | Msa1327440:CDS | 40.0% |
| ! | GATACTGGCTGATCAAGTTA+GGG | - | chr8_4:44816832-44816851 | Msa1327440:CDS | 40.0% |
| !! | TGTTTTCAGTGTCGAGCTTT+TGG | - | chr8_4:44816897-44816916 | Msa1327440:CDS | 40.0% |
| !! | GTTTTCAGTGTCGAGCTTTT+GGG | - | chr8_4:44816898-44816917 | Msa1327440:CDS | 40.0% |
| AATGACAAAGGAGACAGGAA+AGG | + | chr8_4:44816936-44816955 | None:intergenic | 40.0% | |
| ! | TTATACACGAGGTTGTTTCC+AGG | + | chr8_4:44817222-44817241 | None:intergenic | 40.0% |
| GCTGCATACAATACACCAAA+TGG | - | chr8_4:44817255-44817274 | Msa1327440:intron | 40.0% | |
| GCATACAATACACCAAATGG+TGG | - | chr8_4:44817258-44817277 | Msa1327440:intron | 40.0% | |
| AGTGTTAGATATCAGACCAC+GGG | - | chr8_4:44817423-44817442 | Msa1327440:intron | 40.0% | |
| ! | ACTGAACGTTTAGAACCTTG+TGG | + | chr8_4:44817474-44817493 | None:intergenic | 40.0% |
| AGCATCTGAACAAGACCTAA+AGG | - | chr8_4:44817551-44817570 | Msa1327440:intron | 40.0% | |
| ! | GTTACTTTCAAGGATCCACA+AGG | - | chr8_4:44817758-44817777 | Msa1327440:intron | 40.0% |
| AGCACCCAATCAATTTGTCT+TGG | - | chr8_4:44817883-44817902 | Msa1327440:intron | 40.0% | |
| CTCAAGGCAATGCCTTTATT+AGG | + | chr8_4:44817982-44818001 | None:intergenic | 40.0% | |
| TGGCTAGATAATGCAGCATA+AGG | - | chr8_4:44818020-44818039 | Msa1327440:intron | 40.0% | |
| GGCTAGATAATGCAGCATAA+GGG | - | chr8_4:44818021-44818040 | Msa1327440:intron | 40.0% | |
| ! | ATTTTCACCCCTGCCTTTTT+TGG | - | chr8_4:44818156-44818175 | Msa1327440:intron | 40.0% |
| CTTATCACCAAAAAAGGCAG+GGG | + | chr8_4:44818166-44818185 | None:intergenic | 40.0% | |
| AGTATCCTCCATTTCCCAAA+AGG | - | chr8_4:44818184-44818203 | Msa1327440:intron | 40.0% | |
| !! | AAATGCCTTTTGGGAAATGG+AGG | + | chr8_4:44818192-44818211 | None:intergenic | 40.0% |
| !! | GAGAAATGCCTTTTGGGAAA+TGG | + | chr8_4:44818195-44818214 | None:intergenic | 40.0% |
| ! | TTACGCGAGAAATGCCTTTT+GGG | + | chr8_4:44818201-44818220 | None:intergenic | 40.0% |
| ! | ATTACGCGAGAAATGCCTTT+TGG | + | chr8_4:44818202-44818221 | None:intergenic | 40.0% |
| AATCCCTTGCGTGTTTAGTT+TGG | - | chr8_4:44818364-44818383 | Msa1327440:intron | 40.0% | |
| !! | GTGTTTAGTTTGGACCTTAG+AGG | - | chr8_4:44818374-44818393 | Msa1327440:intron | 40.0% |
| AGACATATATGCAGCCTCTA+AGG | + | chr8_4:44818391-44818410 | None:intergenic | 40.0% | |
| GAGCATAAACATCACACATC+AGG | - | chr8_4:44818607-44818626 | Msa1327440:intron | 40.0% | |
| AAACTTAGGCTATTGGGTGA+AGG | - | chr8_4:44818698-44818717 | Msa1327440:intron | 40.0% | |
| CAAAGGGCTCTTATGTTAGT+GGG | + | chr8_4:44818769-44818788 | None:intergenic | 40.0% | |
| ! | TTTTCAGCACAAAGTAGGGT+GGG | + | chr8_4:44818818-44818837 | None:intergenic | 40.0% |
| !! | TTTTTCAGCACAAAGTAGGG+TGG | + | chr8_4:44818819-44818838 | None:intergenic | 40.0% |
| GAAGAAAGAATTCTCCACCA+AGG | - | chr8_4:44818992-44819011 | Msa1327440:intron | 40.0% | |
| ATGAAAAAGGAAACCCTTGG+TGG | + | chr8_4:44819009-44819028 | None:intergenic | 40.0% | |
| TGATAGAAACTGGTACCAGT+AGG | - | chr8_4:44819163-44819182 | Msa1327440:intron | 40.0% | |
| TCAAGCTCTTGAAACTTGGT+AGG | + | chr8_4:44819302-44819321 | None:intergenic | 40.0% | |
| !! | AAACTGGCTTTGGTCAGTAT+TGG | - | chr8_4:44819468-44819487 | Msa1327440:intron | 40.0% |
| GATATGCATCTCTGCCTATT+TGG | - | chr8_4:44819669-44819688 | Msa1327440:intron | 40.0% | |
| ! | CCTTCTCTTTTCTCTGAACA+TGG | + | chr8_4:44819710-44819729 | None:intergenic | 40.0% |
| CCATGTTCAGAGAAAAGAGA+AGG | - | chr8_4:44819707-44819726 | Msa1327440:intron | 40.0% | |
| ATTCATGTGATGTCTGATGC+TGG | - | chr8_4:44819829-44819848 | Msa1327440:intron | 40.0% | |
| TCAGACATATCCCAAAGTAG+AGG | + | chr8_4:44820112-44820131 | None:intergenic | 40.0% | |
| TGAGAGGTTGCATACATCAT+TGG | + | chr8_4:44820238-44820257 | None:intergenic | 40.0% | |
| CCTTGAGCACATTAACTAGA+GGG | + | chr8_4:44820624-44820643 | None:intergenic | 40.0% | |
| CCTCTAGTTAATGTGCTCAA+GGG | - | chr8_4:44820622-44820641 | Msa1327440:intron | 40.0% | |
| ! | AATGTGCTCAAGGGTATGTT+TGG | - | chr8_4:44820631-44820650 | Msa1327440:intron | 40.0% |
| ! | CAAGGGTATGTTTGGATAAG+TGG | - | chr8_4:44820639-44820658 | Msa1327440:intron | 40.0% |
| ATAAGGTGGAATAGCCCAAT+AGG | + | chr8_4:44820730-44820749 | None:intergenic | 40.0% | |
| ATAAGGTGGAATAGCCGAAT+AGG | + | chr8_4:44820796-44820815 | None:intergenic | 40.0% | |
| !!! | TAATATTTTTCAGGCCGCTG+AGG | - | chr8_4:44820870-44820889 | Msa1327440:intron | 40.0% |
| !!! | AATATTTTTCAGGCCGCTGA+GGG | - | chr8_4:44820871-44820890 | Msa1327440:intron | 40.0% |
| CTTGCGAAGGGATTTATCTT+AGG | - | chr8_4:44820955-44820974 | Msa1327440:intron | 40.0% | |
| AGATGCTGTGAACAAAGCAA+AGG | - | chr8_4:44820981-44821000 | Msa1327440:intron | 40.0% | |
| GATGCTGTGAACAAAGCAAA+GGG | - | chr8_4:44820982-44821001 | Msa1327440:intron | 40.0% | |
| AAAAGATGTAACTTTCGCCG+AGG | + | chr8_4:44821040-44821059 | None:intergenic | 40.0% | |
| ! | TCTCACTAAGCCCAAGTTTT+TGG | + | chr8_4:44821065-44821084 | None:intergenic | 40.0% |
| GAGTGGTAGAGTTAAAGAAG+TGG | - | chr8_4:44821110-44821129 | Msa1327440:intron | 40.0% | |
| ATATACTCACTGGTACTACC+TGG | - | chr8_4:44821229-44821248 | Msa1327440:intron | 40.0% | |
| TATACTCACTGGTACTACCT+GGG | - | chr8_4:44821230-44821249 | Msa1327440:intron | 40.0% | |
| ! | GGTAACTGGTGCTTTTAGTA+AGG | - | chr8_4:44821251-44821270 | Msa1327440:intron | 40.0% |
| GAAAGTGGAAAATGCAGAAG+TGG | - | chr8_4:44821314-44821333 | Msa1327440:intron | 40.0% | |
| CTCACACTGAAACAATTTGC+AGG | + | chr8_4:44821489-44821508 | None:intergenic | 40.0% | |
| ! | GTCTTTTCCCATTCAGTCTA+TGG | - | chr8_4:44821619-44821638 | Msa1327440:five_prime_UTR | 40.0% |
| TACACAAGGGTGGAAAATGA+AGG | - | chr8_4:44821705-44821724 | Msa1327440:five_prime_UTR | 40.0% | |
| AAGAGTAAGACGGATCTAGG+AGG | + | chr8_4:44816381-44816400 | None:intergenic | 45.0% | |
| !!! | AGTGTCGAGCTTTTGGGTTA+AGG | - | chr8_4:44816904-44816923 | Msa1327440:CDS | 45.0% |
| CTTATGTAAAGGGGTAGCCT+TGG | - | chr8_4:44817146-44817165 | Msa1327440:intron | 45.0% | |
| AACGTCATAGGTTCAAGTCC+TGG | - | chr8_4:44817201-44817220 | Msa1327440:intron | 45.0% | |
| GGAGTGTATGATGCAGAGAT+GGG | - | chr8_4:44817444-44817463 | Msa1327440:intron | 45.0% | |
| GGTCCAAACTAAACACGCAA+GGG | + | chr8_4:44818370-44818389 | None:intergenic | 45.0% | |
| AGGTCCAAACTAAACACGCA+AGG | + | chr8_4:44818371-44818390 | None:intergenic | 45.0% | |
| GAGGTTCACAATGAAACCCT+TGG | + | chr8_4:44818536-44818555 | None:intergenic | 45.0% | |
| ! | ATTGGGTGAAGGCACACAAA+TGG | - | chr8_4:44818709-44818728 | Msa1327440:intron | 45.0% |
| ! | GCTCTTATGTTAGTGGGCAA+GGG | + | chr8_4:44818763-44818782 | None:intergenic | 45.0% |
| CCAAAGGGCTCTTATGTTAG+TGG | + | chr8_4:44818770-44818789 | None:intergenic | 45.0% | |
| CCACTAACATAAGAGCCCTT+TGG | - | chr8_4:44818767-44818786 | Msa1327440:intron | 45.0% | |
| AACATAAGAGCCCTTTGGTC+TGG | - | chr8_4:44818772-44818791 | Msa1327440:intron | 45.0% | |
| GTCTACACTTCCAGACCAAA+GGG | + | chr8_4:44818785-44818804 | None:intergenic | 45.0% | |
| TGTCTACACTTCCAGACCAA+AGG | + | chr8_4:44818786-44818805 | None:intergenic | 45.0% | |
| ! | TGGAAGTGTAGACAATGCAC+AGG | - | chr8_4:44818792-44818811 | Msa1327440:intron | 45.0% |
| GGTCAATGTGTTACGAACTC+AGG | - | chr8_4:44818891-44818910 | Msa1327440:intron | 45.0% | |
| TGATAGAAAGGGGGCCTTTA+GGG | + | chr8_4:44819045-44819064 | None:intergenic | 45.0% | |
| ATGATAGAAAGGGGGCCTTT+AGG | + | chr8_4:44819046-44819065 | None:intergenic | 45.0% | |
| ! | ACAGGAAAGTGCAGTAGACA+CGG | - | chr8_4:44819274-44819293 | Msa1327440:intron | 45.0% |
| !! | TTGGTCAGTATTGGCCTTCT+CGG | - | chr8_4:44819477-44819496 | Msa1327440:intron | 45.0% |
| GGGATAGCTAATTCACGACA+TGG | + | chr8_4:44819576-44819595 | None:intergenic | 45.0% | |
| ! | AAGAGAAGGACTGTGCTGTT+AGG | - | chr8_4:44819721-44819740 | Msa1327440:intron | 45.0% |
| TTGCCTAAGTGCCTCTACTT+TGG | - | chr8_4:44820098-44820117 | Msa1327440:CDS | 45.0% | |
| TGCCTAAGTGCCTCTACTTT+GGG | - | chr8_4:44820099-44820118 | Msa1327440:CDS | 45.0% | |
| !! | ATCCCAAAGTAGAGGCACTT+AGG | + | chr8_4:44820104-44820123 | None:intergenic | 45.0% |
| AGCATCAAATTGGTCCTGGA+AGG | - | chr8_4:44820301-44820320 | Msa1327440:CDS | 45.0% | |
| GCAGGTGGAAGTTTGTAATC+TGG | + | chr8_4:44820569-44820588 | None:intergenic | 45.0% | |
| CCCTCTAGTTAATGTGCTCA+AGG | - | chr8_4:44820621-44820640 | Msa1327440:intron | 45.0% | |
| CCCTTGAGCACATTAACTAG+AGG | + | chr8_4:44820625-44820644 | None:intergenic | 45.0% | |
| ! | AGCAGCTGCAAATGCTGATT+TGG | + | chr8_4:44821163-44821182 | None:intergenic | 45.0% |
| AACAGAAAGTCAGTACCGCA+GGG | - | chr8_4:44821184-44821203 | Msa1327440:intron | 45.0% | |
| CTTCATTATAGCAGACCCTG+CGG | + | chr8_4:44821202-44821221 | None:intergenic | 45.0% | |
| !! | ACTAAAAGCACCAGTTACCC+AGG | + | chr8_4:44821250-44821269 | None:intergenic | 45.0% |
| !!! | TAAGTTTTTTTTTTTTTTTT+TGG | - | chr8_4:44818126-44818145 | Msa1327440:intron | 5.0% |
| !!! | TATATTTAAAATTTTATCAT+TGG | - | chr8_4:44820153-44820172 | Msa1327440:intron | 5.0% |
| AACTGGGGTGTGTGTTTGAG+AGG | + | chr8_4:44816267-44816286 | None:intergenic | 50.0% | |
| TACACACTTAGAATCGCCCC+CGG | - | chr8_4:44816560-44816579 | Msa1327440:CDS | 50.0% | |
| ! | ATGTAAAGGGGTAGCCTTGG+CGG | - | chr8_4:44817149-44817168 | Msa1327440:intron | 50.0% |
| CTAAAGCTCCTGCATACGCA+AGG | + | chr8_4:44817298-44817317 | None:intergenic | 50.0% | |
| ! | ATGCAGGAGCTTTAGTGCAC+CGG | - | chr8_4:44817303-44817322 | Msa1327440:CDS | 50.0% |
| ! | GGGAGTGTATGATGCAGAGA+TGG | - | chr8_4:44817443-44817462 | Msa1327440:intron | 50.0% |
| ! | GTCTTGTTCAGATGCTCCCA+AGG | + | chr8_4:44817547-44817566 | None:intergenic | 50.0% |
| CGATAGTAGTACTGCCGTCT+CGG | + | chr8_4:44817786-44817805 | None:intergenic | 50.0% | |
| CGAGACGGCAGTACTACTAT+CGG | - | chr8_4:44817784-44817803 | Msa1327440:intron | 50.0% | |
| ! | GGCTCTTATGTTAGTGGGCA+AGG | + | chr8_4:44818764-44818783 | None:intergenic | 50.0% |
| GTGTCTACTGCACTTTCCTG+TGG | + | chr8_4:44819275-44819294 | None:intergenic | 50.0% | |
| GGCTATAGGAGGAGAGACAA+AGG | + | chr8_4:44819503-44819522 | None:intergenic | 50.0% | |
| TGGTCCTGGAAGGATGAAAC+TGG | - | chr8_4:44820311-44820330 | Msa1327440:CDS | 50.0% | |
| ! | CAAACTTCCACCTGCTGCTT+TGG | - | chr8_4:44820574-44820593 | Msa1327440:intron | 50.0% |
| ACAGATGATGCCAAAGCAGC+AGG | + | chr8_4:44820587-44820606 | None:intergenic | 50.0% | |
| ! | ACCAGGAGTTTTACCCTCAG+CGG | + | chr8_4:44820887-44820906 | None:intergenic | 50.0% |
| !! | GTGGTGCTGACTCTGCTTTA+CGG | - | chr8_4:44820905-44820924 | Msa1327440:intron | 50.0% |
| !! | TGCTGACTCTGCTTTACGGA+AGG | - | chr8_4:44820909-44820928 | Msa1327440:intron | 50.0% |
| TTTACGGAAGGCAGAGGATG+TGG | - | chr8_4:44820921-44820940 | Msa1327440:intron | 50.0% | |
| AAATCCCTTCGCAAGCATGC+TGG | + | chr8_4:44820950-44820969 | None:intergenic | 50.0% | |
| CCAGTTGAGTTCAACAGCCT+CGG | - | chr8_4:44821020-44821039 | Msa1327440:intron | 50.0% | |
| GAACAGAAAGTCAGTACCGC+AGG | - | chr8_4:44821183-44821202 | Msa1327440:intron | 50.0% | |
| ACTGGTACTACCTGGGTAAC+TGG | - | chr8_4:44821237-44821256 | Msa1327440:intron | 50.0% | |
| AGTAAGGTTGCTAAGGCAGC+TGG | - | chr8_4:44821267-44821286 | Msa1327440:intron | 50.0% | |
| GTAAGGTTGCTAAGGCAGCT+GGG | - | chr8_4:44821268-44821287 | Msa1327440:intron | 50.0% | |
| TAAGGTTGCTAAGGCAGCTG+GGG | - | chr8_4:44821269-44821288 | Msa1327440:intron | 50.0% | |
| AGTTGAAGACCAGTATGCGC+AGG | - | chr8_4:44821350-44821369 | Msa1327440:intron | 50.0% | |
| !! | ACTTGTTGCTGCGGCTTTTG+GGG | + | chr8_4:44821388-44821407 | None:intergenic | 50.0% |
| !! | CACTTGTTGCTGCGGCTTTT+GGG | + | chr8_4:44821389-44821408 | None:intergenic | 50.0% |
| !! | TCACTTGTTGCTGCGGCTTT+TGG | + | chr8_4:44821390-44821409 | None:intergenic | 50.0% |
| ! | GTGCAGTTCACTTGTTGCTG+CGG | + | chr8_4:44821397-44821416 | None:intergenic | 50.0% |
| ATCAAACCCTGAGCAGGTGT+AGG | + | chr8_4:44821429-44821448 | None:intergenic | 50.0% | |
| CAAAGGATCAAACCCTGAGC+AGG | + | chr8_4:44821435-44821454 | None:intergenic | 50.0% | |
| TTCGACTATCGTCGTGGTGG+TGG | + | chr8_4:44816155-44816174 | None:intergenic | 55.0% | |
| GCTTTCGACTATCGTCGTGG+TGG | + | chr8_4:44816158-44816177 | None:intergenic | 55.0% | |
| CGTGCTTTCGACTATCGTCG+TGG | + | chr8_4:44816161-44816180 | None:intergenic | 55.0% | |
| ! | AGCGTAACGGCGTCGAAACT+GGG | + | chr8_4:44816283-44816302 | None:intergenic | 55.0% |
| ! | AAGCGTAACGGCGTCGAAAC+TGG | + | chr8_4:44816284-44816303 | None:intergenic | 55.0% |
| !! | CAACTTTACCGGTTCCGCCA+AGG | + | chr8_4:44817166-44817185 | None:intergenic | 55.0% |
| !! | CGGAAAGGGGTACCACCATT+TGG | + | chr8_4:44817273-44817292 | None:intergenic | 55.0% |
| CATACGCAAGGTGCGGAAAG+GGG | + | chr8_4:44817286-44817305 | None:intergenic | 55.0% | |
| GCATACGCAAGGTGCGGAAA+GGG | + | chr8_4:44817287-44817306 | None:intergenic | 55.0% | |
| TGCATACGCAAGGTGCGGAA+AGG | + | chr8_4:44817288-44817307 | None:intergenic | 55.0% | |
| TTTCCGCACCTTGCGTATGC+AGG | - | chr8_4:44817287-44817306 | Msa1327440:CDS | 55.0% | |
| ! | TGCAGGAGCTTTAGTGCACC+GGG | - | chr8_4:44817304-44817323 | Msa1327440:CDS | 55.0% |
| CTCTGCATCATACACTCCCG+TGG | + | chr8_4:44817442-44817461 | None:intergenic | 55.0% | |
| ! | GCAGAGATGGGTTCTCCACA+AGG | - | chr8_4:44817456-44817475 | Msa1327440:intron | 55.0% |
| GGTCAGTGAGTTGCTGTGCT+TGG | - | chr8_4:44817619-44817638 | Msa1327440:intron | 55.0% | |
| AGGAGAGACAAAGGCCGAGA+AGG | + | chr8_4:44819494-44819513 | None:intergenic | 55.0% | |
| GCAGCCAGTTTCATCCTTCC+AGG | + | chr8_4:44820318-44820337 | None:intergenic | 55.0% | |
| GATGATGCCAAAGCAGCAGG+TGG | + | chr8_4:44820584-44820603 | None:intergenic | 55.0% | |
| GCTGAGGGTAAAACTCCTGG+TGG | - | chr8_4:44820886-44820905 | Msa1327440:intron | 55.0% | |
| AAAGCAGAGTCAGCACCACC+AGG | + | chr8_4:44820904-44820923 | None:intergenic | 55.0% | |
| CTCTGCTTTACGGAAGGCAG+AGG | - | chr8_4:44820915-44820934 | Msa1327440:intron | 55.0% | |
| GTCACCAGCATGCTTGCGAA+GGG | - | chr8_4:44820943-44820962 | Msa1327440:intron | 55.0% | |
| CCGAGGCTGTTGAACTCAAC+TGG | + | chr8_4:44821023-44821042 | None:intergenic | 55.0% | |
| GCTGGTGCATCAGTTGTGAG+TGG | - | chr8_4:44821093-44821112 | Msa1327440:intron | 55.0% | |
| CCAGTATGCGCAGGTCCTTT+CGG | - | chr8_4:44821359-44821378 | Msa1327440:intron | 55.0% | |
| TTCCAAGCCTACACCTGCTC+AGG | - | chr8_4:44821419-44821438 | Msa1327440:intron | 55.0% | |
| TCCAAGCCTACACCTGCTCA+GGG | - | chr8_4:44821420-44821439 | Msa1327440:intron | 55.0% | |
| !! | GACTATCGTCGTGGTGGTGG+TGG | + | chr8_4:44816152-44816171 | None:intergenic | 60.0% |
| ! | GCGTAACGGCGTCGAAACTG+GGG | + | chr8_4:44816282-44816301 | None:intergenic | 60.0% |
| GCTCCTGCATACGCAAGGTG+CGG | + | chr8_4:44817293-44817312 | None:intergenic | 60.0% | |
| !! | GGATCCACAAGGTGCCGAGA+CGG | - | chr8_4:44817769-44817788 | Msa1327440:intron | 60.0% |
| GCCGCTGAGGGTAAAACTCC+TGG | - | chr8_4:44820883-44820902 | Msa1327440:intron | 60.0% | |
| GGTCACCAGCATGCTTGCGA+AGG | - | chr8_4:44820942-44820961 | Msa1327440:intron | 60.0% | |
| GCTAAGGCAGCTGGGGATGT+AGG | - | chr8_4:44821276-44821295 | Msa1327440:intron | 60.0% | |
| CCGAAAGGACCTGCGCATAC+TGG | + | chr8_4:44821362-44821381 | None:intergenic | 60.0% | |
| !! | CGGCTTTTGGGGACTCCGAA+AGG | + | chr8_4:44821377-44821396 | None:intergenic | 60.0% |
| ACCCTGAGCAGGTGTAGGCT+TGG | + | chr8_4:44821424-44821443 | None:intergenic | 60.0% | |
| ! | AGGGGTAGCCTTGGCGGAAC+CGG | - | chr8_4:44817155-44817174 | Msa1327440:intron | 65.0% |
| ACTGCCGTCTCGGCACCTTG+TGG | + | chr8_4:44817776-44817795 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 44816134 | 44821745 | 44816134 | ID=Msa1327440;Name=Msa1327440 |
| chr8_4 | mRNA | 44816134 | 44821745 | 44816134 | ID=Msa1327440-mRNA-1;Parent=Msa1327440;Name=Msa1327440-mRNA-1;_AED=0.07;_eAED=0.07;_QI=267|1|1|1|0.75|0.8|5|290|295 |
| chr8_4 | exon | 44816134 | 44816996 | 44816134 | ID=Msa1327440-mRNA-1:exon:12524;Parent=Msa1327440-mRNA-1 |
| chr8_4 | exon | 44817275 | 44817355 | 44817275 | ID=Msa1327440-mRNA-1:exon:12523;Parent=Msa1327440-mRNA-1 |
| chr8_4 | exon | 44820074 | 44820149 | 44820074 | ID=Msa1327440-mRNA-1:exon:12522;Parent=Msa1327440-mRNA-1 |
| chr8_4 | exon | 44820260 | 44820500 | 44820260 | ID=Msa1327440-mRNA-1:exon:12521;Parent=Msa1327440-mRNA-1 |
| chr8_4 | exon | 44821562 | 44821745 | 44821562 | ID=Msa1327440-mRNA-1:exon:12520;Parent=Msa1327440-mRNA-1 |
| chr8_4 | five_prime_UTR | 44821562 | 44821745 | 44821562 | ID=Msa1327440-mRNA-1:five_prime_utr;Parent=Msa1327440-mRNA-1 |
| chr8_4 | five_prime_UTR | 44820418 | 44820500 | 44820418 | ID=Msa1327440-mRNA-1:five_prime_utr;Parent=Msa1327440-mRNA-1 |
| chr8_4 | CDS | 44820260 | 44820417 | 44820260 | ID=Msa1327440-mRNA-1:cds;Parent=Msa1327440-mRNA-1 |
| chr8_4 | CDS | 44820074 | 44820149 | 44820074 | ID=Msa1327440-mRNA-1:cds;Parent=Msa1327440-mRNA-1 |
| chr8_4 | CDS | 44817275 | 44817355 | 44817275 | ID=Msa1327440-mRNA-1:cds;Parent=Msa1327440-mRNA-1 |
| chr8_4 | CDS | 44816424 | 44816996 | 44816424 | ID=Msa1327440-mRNA-1:cds;Parent=Msa1327440-mRNA-1 |
| chr8_4 | three_prime_UTR | 44816134 | 44816423 | 44816134 | ID=Msa1327440-mRNA-1:three_prime_utr;Parent=Msa1327440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
