Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238810 | KEH18955.1 | 94.411 | 501 | 26 | 2 | 1 | 500 | 1 | 500 | 0.0 | 942 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238810 | sp|Q4V3D3|PUX9_ARATH | 34.241 | 514 | 278 | 14 | 1 | 500 | 1 | 468 | 1.92e-66 | 224 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0093850 | Msa1238810 | 0.829137 | 6.090115e-55 | -8.615850e-47 |
| Msa0669180 | Msa1238810 | 0.802615 | 5.158244e-49 | -8.615850e-47 |
| Msa0693330 | Msa1238810 | 0.815180 | 1.055230e-51 | -8.615850e-47 |
| Msa0138360 | Msa1238810 | 0.813668 | 2.278356e-51 | -8.615850e-47 |
| Msa0144360 | Msa1238810 | 0.807226 | 5.606072e-50 | -8.615850e-47 |
| Msa0147980 | Msa1238810 | 0.802390 | 5.739933e-49 | -8.615850e-47 |
| Msa1238810 | Msa1369690 | 0.805818 | 1.111096e-49 | -8.615850e-47 |
| Msa1238810 | Msa1371520 | 0.817381 | 3.395737e-52 | -8.615850e-47 |
| Msa1238810 | Msa1459460 | 0.801473 | 8.855168e-49 | -8.615850e-47 |
| Msa0435420 | Msa1238810 | 0.802699 | 4.956029e-49 | -8.615850e-47 |
| Msa0322900 | Msa1238810 | 0.803665 | 3.127475e-49 | -8.615850e-47 |
| Msa0341690 | Msa1238810 | 0.815545 | 8.752630e-52 | -8.615850e-47 |
| Msa0518030 | Msa1238810 | 0.810881 | 9.243382e-51 | -8.615850e-47 |
| Msa0527190 | Msa1238810 | 0.801503 | 8.730799e-49 | -8.615850e-47 |
| Msa0556010 | Msa1238810 | 0.806134 | 9.532913e-50 | -8.615850e-47 |
| Msa0575920 | Msa1238810 | 0.801250 | 9.838028e-49 | -8.615850e-47 |
| Msa0945490 | Msa1238810 | 0.801268 | 9.755843e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238810 | MtrunA17_Chr8g0350381 | 94.411 | 501 | 26 | 2 | 1 | 500 | 36 | 535 | 0.0 | 941 |
| Msa1238810 | MtrunA17_Chr4g0057301 | 41.364 | 220 | 119 | 4 | 288 | 500 | 364 | 580 | 2.93e-40 | 153 |
| Msa1238810 | MtrunA17_Chr4g0057301 | 33.910 | 289 | 135 | 16 | 1 | 256 | 1 | 266 | 8.57e-20 | 92.4 |
| Msa1238810 | MtrunA17_Chr4g0058781 | 33.750 | 160 | 90 | 3 | 354 | 498 | 212 | 370 | 5.01e-15 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238810 | AT4G00752.1 | 34.241 | 514 | 278 | 14 | 1 | 500 | 1 | 468 | 1.95e-67 | 224 |
| Msa1238810 | AT4G11740.1 | 42.105 | 228 | 106 | 2 | 288 | 500 | 348 | 564 | 3.16e-44 | 164 |
| Msa1238810 | AT4G11740.1 | 28.846 | 312 | 142 | 14 | 1 | 274 | 1 | 270 | 5.69e-16 | 81.3 |
| Msa1238810 | AT4G23040.1 | 45.249 | 221 | 100 | 4 | 288 | 500 | 318 | 525 | 1.35e-43 | 162 |
| Msa1238810 | AT4G23040.1 | 29.876 | 241 | 116 | 8 | 1 | 221 | 1 | 208 | 1.42e-11 | 67.0 |
| Msa1238810 | AT4G11740.2 | 28.846 | 312 | 142 | 14 | 1 | 274 | 1 | 270 | 6.73e-16 | 80.5 |
Find 119 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGATTTCATTGACATTTA+TGG | 0.037512 | 8_2:+19631487 | Msa1238810:CDS |
| CAAGAATGAGGCTTTATTTC+TGG | 0.096417 | 8_2:+19632357 | Msa1238810:CDS |
| CTGATTGAAACTGCGCTTTA+TGG | 0.169001 | 8_2:+19629629 | Msa1238810:CDS |
| TATCATTTCACTGTCTTTAC+AGG | 0.202618 | 8_2:+19628658 | Msa1238810:CDS |
| ACTTGTCAATTATTATATTT+AGG | 0.217192 | 8_2:+19632535 | Msa1238810:three_prime_UTR |
| TTAGAACCCAAGAAATTATC+AGG | 0.246631 | 8_2:+19632427 | Msa1238810:three_prime_UTR |
| TCTCATGGTAGAGGATATTA+TGG | 0.274729 | 8_2:+19628339 | Msa1238810:CDS |
| CACCTGACCCAGCACGGTTT+TGG | 0.306023 | 8_2:-19628062 | None:intergenic |
| TTCTTCTTGCTTTGACGAAT+GGG | 0.316400 | 8_2:-19629948 | None:intergenic |
| TGAACGAGAAGATGATGATT+TGG | 0.317721 | 8_2:+19628631 | Msa1238810:CDS |
| ATGAAGGTTGCGACGGATTC+CGG | 0.318205 | 8_2:-19626933 | None:intergenic |
| ACTGGATGAACCCTGCCTTT+TGG | 0.331875 | 8_2:-19629729 | None:intergenic |
| TCAAGGACCAGGATACTAAA+TGG | 0.332627 | 8_2:-19632404 | None:intergenic |
| TGAGCGCCCTGATAATTTCT+TGG | 0.355198 | 8_2:-19632434 | None:intergenic |
| GGATACTAAATGGAAGAAAT+AGG | 0.356371 | 8_2:-19632394 | None:intergenic |
| TTTCTTCTTGCTTTGACGAA+TGG | 0.361288 | 8_2:-19629949 | None:intergenic |
| TCGCCTAAGGGTGGTTCATT+TGG | 0.363564 | 8_2:-19630672 | None:intergenic |
| TCTTCAAAACTGACAAGCTT+CGG | 0.377260 | 8_2:+19630754 | Msa1238810:CDS |
| ATTTCTTCCATTTAGTATCC+TGG | 0.377378 | 8_2:+19632397 | Msa1238810:three_prime_UTR |
| TGAAGGTTGCGACGGATTCC+GGG | 0.385376 | 8_2:-19626932 | None:intergenic |
| TTCTCTGATCTCCTTCTTCG+AGG | 0.391845 | 8_2:-19628460 | None:intergenic |
| CTTCAAAACTGACAAGCTTC+GGG | 0.392662 | 8_2:+19630755 | Msa1238810:CDS |
| TCCAATAAAATGTGCATTCA+CGG | 0.399173 | 8_2:-19627817 | None:intergenic |
| AATTTCTTGGGTTCTAATCA+AGG | 0.403166 | 8_2:-19632421 | None:intergenic |
| TCTCGTTCAAAATGACTTTG+TGG | 0.407322 | 8_2:-19628617 | None:intergenic |
| CATTGCGCACAAAATGTTGA+TGG | 0.409363 | 8_2:-19626898 | None:intergenic |
| TCTGAATGATGTCGTGGGTC+AGG | 0.411598 | 8_2:-19629692 | None:intergenic |
| TGAGAGGAAAGGTGAAGAGA+TGG | 0.424791 | 8_2:-19626854 | None:intergenic |
| TCAGTTGATAAGACAACAAC+AGG | 0.428917 | 8_2:+19629778 | Msa1238810:CDS |
| CAACCTGGATTGGGCTATGC+AGG | 0.430431 | 8_2:+19628291 | Msa1238810:CDS |
| GAGCGCCCTGATAATTTCTT+GGG | 0.435449 | 8_2:-19632433 | None:intergenic |
| TAATAACTGAGATGCTGAAC+TGG | 0.436931 | 8_2:-19629747 | None:intergenic |
| TACTATTGTTGTTCGAATGC+CGG | 0.439751 | 8_2:+19630707 | Msa1238810:CDS |
| AACCAAAACCGTGCTGGGTC+AGG | 0.445457 | 8_2:+19628060 | Msa1238810:CDS |
| AGAGATCTATGTAACGGGTT+TGG | 0.445773 | 8_2:+19628162 | Msa1238810:CDS |
| AATGCTTCATTGAGCTCGTC+AGG | 0.450397 | 8_2:-19629605 | None:intergenic |
| AGCCCAATCCAGGTTGATAC+TGG | 0.451257 | 8_2:-19628284 | None:intergenic |
| AACTTAGAGATCTATGTAAC+GGG | 0.459209 | 8_2:+19628157 | Msa1238810:CDS |
| TACCAGTATCAACCTGGATT+GGG | 0.460679 | 8_2:+19628282 | Msa1238810:CDS |
| CTACCAGTATCAACCTGGAT+TGG | 0.465056 | 8_2:+19628281 | Msa1238810:CDS |
| AATTTAGACTGCAGAGAAAG+AGG | 0.466485 | 8_2:+19628759 | Msa1238810:intron |
| GAAGCACTTGATTGAGCTAA+AGG | 0.467737 | 8_2:-19628387 | None:intergenic |
| TTGCAGGAACTGGAGAAAAC+AGG | 0.468610 | 8_2:+19630627 | Msa1238810:intron |
| CGCAATGACGACACTGTCCC+CGG | 0.471911 | 8_2:+19626914 | Msa1238810:exon |
| CTTCCAAATGAACCACCCTT+AGG | 0.475058 | 8_2:+19630669 | Msa1238810:CDS |
| CAAAACAACCAAAACCGTGC+TGG | 0.483793 | 8_2:+19628054 | Msa1238810:CDS |
| AGAAACACTCACAACTCTAT+AGG | 0.485284 | 8_2:-19631527 | None:intergenic |
| CTTCAGAGTAATCATAGTGT+GGG | 0.488279 | 8_2:-19628023 | None:intergenic |
| CAGAGAAAGAGGAAGCAATA+CGG | 0.495874 | 8_2:+19628770 | Msa1238810:CDS |
| AAGCCTCATTCTTGTTGCTA+AGG | 0.504811 | 8_2:-19632348 | None:intergenic |
| GTTCTCCACAAGGGGAGGCA+AGG | 0.512550 | 8_2:+19628220 | Msa1238810:CDS |
| AAATGCTGATCCCAAAAGGC+AGG | 0.513755 | 8_2:+19629718 | Msa1238810:CDS |
| TACTACTTGACTCAAACTAT+AGG | 0.513851 | 8_2:+19628130 | Msa1238810:CDS |
| AATTCCCTTGCCTCCCCTTG+TGG | 0.513986 | 8_2:-19628225 | None:intergenic |
| TGTCGTGGGTCAGGCAAAGA+TGG | 0.514064 | 8_2:-19629683 | None:intergenic |
| AAGCACTTGATTGAGCTAAA+GGG | 0.522489 | 8_2:-19628386 | None:intergenic |
| CGTTCACAACGACCACCGTC+CGG | 0.525938 | 8_2:-19630726 | None:intergenic |
| TTCTCCACAAGGGGAGGCAA+GGG | 0.527047 | 8_2:+19628221 | Msa1238810:CDS |
| AGAGAAAGAGGAAGCAATAC+GGG | 0.529756 | 8_2:+19628771 | Msa1238810:CDS |
| ATGAGATGATAAATTTCCAT+TGG | 0.530591 | 8_2:-19628322 | None:intergenic |
| GCACCTGCATAGCCCAATCC+AGG | 0.530699 | 8_2:-19628294 | None:intergenic |
| TGCTCATGCTTTATTAGCCG+AGG | 0.531346 | 8_2:+19628828 | Msa1238810:CDS |
| TGCAATAGAAGCCTCGAAGA+AGG | 0.533510 | 8_2:+19628449 | Msa1238810:CDS |
| TTGGGTTCTAATCAAGGACC+AGG | 0.534046 | 8_2:-19632415 | None:intergenic |
| ACGGGAGCTTCGAGCAAAAG+AGG | 0.535685 | 8_2:+19628789 | Msa1238810:CDS |
| TTGTCTTATCAACTGAGTCT+CGG | 0.537380 | 8_2:-19629771 | None:intergenic |
| ATTTATGGAGCAGTGAAGGC+TGG | 0.539511 | 8_2:+19631502 | Msa1238810:CDS |
| GAATTTCCTACAGGGATCAA+TGG | 0.541343 | 8_2:+19628243 | Msa1238810:CDS |
| CTCATGGTAGAGGATATTAT+GGG | 0.544269 | 8_2:+19628340 | Msa1238810:CDS |
| AAAACAACCAAAACCGTGCT+GGG | 0.546680 | 8_2:+19628055 | Msa1238810:CDS |
| GAGGCAAGGGAATTTCCTAC+AGG | 0.546922 | 8_2:+19628234 | Msa1238810:CDS |
| GCAACCTTCATGCGTATCAC+AGG | 0.548735 | 8_2:+19626945 | Msa1238810:CDS |
| AAAGCTTATGTTGGTGTGAG+AGG | 0.550956 | 8_2:-19626870 | None:intergenic |
| TGACATTTATGGAGCAGTGA+AGG | 0.557111 | 8_2:+19631498 | Msa1238810:CDS |
| AATTTATCATCTCATGGTAG+AGG | 0.558707 | 8_2:+19628330 | Msa1238810:CDS |
| CAAAACCGTGCTGGGTCAGG+TGG | 0.560404 | 8_2:+19628063 | Msa1238810:CDS |
| GTTAGTAGTTCTCTCTCCCT+CGG | 0.562193 | 8_2:-19628845 | None:intergenic |
| TAACATTGTATGCTCGTCGC+GGG | 0.563151 | 8_2:-19632294 | None:intergenic |
| AATGGAAATTTATCATCTCA+TGG | 0.563505 | 8_2:+19628324 | Msa1238810:CDS |
| CAATCCAGGTTGATACTGGT+AGG | 0.564563 | 8_2:-19628280 | None:intergenic |
| TTTGAGTCAAGTAGTAGTGA+AGG | 0.568566 | 8_2:-19628123 | None:intergenic |
| GAACTTAGAGATCTATGTAA+CGG | 0.570755 | 8_2:+19628156 | Msa1238810:CDS |
| GCTTCAGAGTAATCATAGTG+TGG | 0.576562 | 8_2:-19628024 | None:intergenic |
| CCACCACGTGGTTCTCCACA+AGG | 0.577108 | 8_2:+19628210 | Msa1238810:CDS |
| AAAGAGGAAAGTAAAGTACT+TGG | 0.583823 | 8_2:+19628805 | Msa1238810:CDS |
| TCTGCTACTTTGAATGAAGT+AGG | 0.591713 | 8_2:+19632325 | Msa1238810:CDS |
| ATTGTTGTTCGAATGCCGGA+CGG | 0.596739 | 8_2:+19630711 | Msa1238810:CDS |
| CATGCGTATCACAGGAGCAA+CGG | 0.599380 | 8_2:+19626953 | Msa1238810:CDS |
| AGGCCTTAGCAACAAGAATG+AGG | 0.602952 | 8_2:+19632345 | Msa1238810:CDS |
| ACCACGTGGTTCTCCACAAG+GGG | 0.608202 | 8_2:+19628212 | Msa1238810:CDS |
| GAAGGTTGCGACGGATTCCG+GGG | 0.608307 | 8_2:-19626931 | None:intergenic |
| GCTCATGCTTTATTAGCCGA+GGG | 0.610195 | 8_2:+19628829 | Msa1238810:CDS |
| TCACCCTACCAGTATCAACC+TGG | 0.613396 | 8_2:+19628276 | Msa1238810:CDS |
| ACGTGGTTCTCCACAAGGGG+AGG | 0.620464 | 8_2:+19628215 | Msa1238810:CDS |
| CTTCTAGCAGCATTGAACAA+AGG | 0.626567 | 8_2:-19628093 | None:intergenic |
| AATCCAGGTTGATACTGGTA+GGG | 0.627507 | 8_2:-19628279 | None:intergenic |
| TGATTCCACCTGACCCAGCA+CGG | 0.628886 | 8_2:-19628068 | None:intergenic |
| TGCTCCTGTGATACGCATGA+AGG | 0.630829 | 8_2:-19626949 | None:intergenic |
| ATGGAAACGAAAGCTTATGT+TGG | 0.632471 | 8_2:-19626879 | None:intergenic |
| GTTGTTCGAATGCCGGACGG+TGG | 0.634608 | 8_2:+19630714 | Msa1238810:CDS |
| CACCACGTGGTTCTCCACAA+GGG | 0.639472 | 8_2:+19628211 | Msa1238810:CDS |
| AACTACCTCTAGTTTCTGAA+CGG | 0.640846 | 8_2:-19626985 | None:intergenic |
| CACTAACAGAAGCAAACTAG+AGG | 0.646420 | 8_2:+19628867 | Msa1238810:CDS |
| AATGCTGATCCCAAAAGGCA+GGG | 0.648598 | 8_2:+19629719 | Msa1238810:CDS |
| ACGTGTTCATGAAGATGCAG+AGG | 0.649063 | 8_2:+19628410 | Msa1238810:CDS |
| TAGAACCCAAGAAATTATCA+GGG | 0.650582 | 8_2:+19632428 | Msa1238810:three_prime_UTR |
| ATATTTATTGAATACAAGTG+AGG | 0.657272 | 8_2:+19632477 | Msa1238810:three_prime_UTR |
| TACATACAATAAGTTAACAA+CGG | 0.672315 | 8_2:-19632501 | None:intergenic |
| TATGCAGGTGCTGATACCAA+TGG | 0.672316 | 8_2:+19628306 | Msa1238810:CDS |
| TTATGTTGGTGTGAGAGGAA+AGG | 0.674086 | 8_2:-19626865 | None:intergenic |
| TTAACATTGTATGCTCGTCG+CGG | 0.674332 | 8_2:-19632295 | None:intergenic |
| TTCAGAGTAATCATAGTGTG+GGG | 0.674899 | 8_2:-19628022 | None:intergenic |
| TGTGCACCATTGATCCCTGT+AGG | 0.679644 | 8_2:-19628249 | None:intergenic |
| GATACGCATGAAGGTTGCGA+CGG | 0.680382 | 8_2:-19626940 | None:intergenic |
| CGTCGCCGTTCAGAAACTAG+AGG | 0.683941 | 8_2:+19626980 | Msa1238810:CDS |
| AGGCAAGGGAATTTCCTACA+GGG | 0.721531 | 8_2:+19628235 | Msa1238810:CDS |
| TCAAGTAGTACACCACCACG+TGG | 0.740632 | 8_2:+19628198 | Msa1238810:CDS |
| CCTTGTGGAGAACCACGTGG+TGG | 0.741616 | 8_2:-19628210 | None:intergenic |
| TCCCCTTGTGGAGAACCACG+TGG | 0.753351 | 8_2:-19628213 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTTGATTTTTCTTAA+CGG | + | chr8_2:19627230-19627249 | Msa1238810:intron | 10.0% |
| !!! | AAATGTTTATTTGAAAATTT+TGG | + | chr8_2:19627446-19627465 | Msa1238810:intron | 10.0% |
| !!! | TAGTAATACAAAATATTTTT+AGG | - | chr8_2:19629082-19629101 | None:intergenic | 10.0% |
| !! | AATTTAAACAAATTTGTAAA+AGG | - | chr8_2:19630237-19630256 | None:intergenic | 10.0% |
| !!! | ATTATTTTATTAAATTTCAC+TGG | - | chr8_2:19631781-19631800 | None:intergenic | 10.0% |
| !!! | TTATTTTGATAGTATAAATT+AGG | - | chr8_2:19631891-19631910 | None:intergenic | 10.0% |
| !! | AAAAAAAGATAAAGAAAAAT+TGG | - | chr8_2:19632075-19632094 | None:intergenic | 10.0% |
| !!! | TTAATTGATAATACAATGTT+GGG | - | chr8_2:19627362-19627381 | None:intergenic | 15.0% |
| !!! | TTTAATTGATAATACAATGT+TGG | - | chr8_2:19627363-19627382 | None:intergenic | 15.0% |
| !! | GAAATAAAAGTAACAAAATA+TGG | - | chr8_2:19628534-19628553 | None:intergenic | 15.0% |
| !!! | TTATCACATCATAATTTTTT+TGG | + | chr8_2:19629039-19629058 | Msa1238810:intron | 15.0% |
| !!! | TATCACATCATAATTTTTTT+GGG | + | chr8_2:19629040-19629059 | Msa1238810:intron | 15.0% |
| !! | TCACAAAAATAAAAAATATG+TGG | - | chr8_2:19631100-19631119 | None:intergenic | 15.0% |
| !! | AAATAAATGTATGAAACTTA+TGG | + | chr8_2:19631807-19631826 | Msa1238810:intron | 15.0% |
| !!! | GCAAAAATAAATAAGCTTTT+AGG | - | chr8_2:19627140-19627159 | None:intergenic | 20.0% |
| !!! | GTATAAAATTTTTACACATC+AGG | + | chr8_2:19627258-19627277 | Msa1238810:intron | 20.0% |
| !! | TCAATAATGTATTGTTACAT+CGG | - | chr8_2:19627315-19627334 | None:intergenic | 20.0% |
| !! | CAATTAAACTTTATTAGTAG+AGG | + | chr8_2:19627375-19627394 | Msa1238810:intron | 20.0% |
| !! | TAAAGAGACTAAACAAAATT+TGG | - | chr8_2:19627614-19627633 | None:intergenic | 20.0% |
| !! | TGAATGCTGAAATAATATAT+TGG | - | chr8_2:19628582-19628601 | None:intergenic | 20.0% |
| !! | ATTGAGTCATACAAATTAAA+AGG | - | chr8_2:19628695-19628714 | None:intergenic | 20.0% |
| !! | ATGATGTGATAAAAAAATCA+AGG | - | chr8_2:19629031-19629050 | None:intergenic | 20.0% |
| !! | TCAAATGTATTAACTTAAGT+CGG | + | chr8_2:19629295-19629314 | Msa1238810:intron | 20.0% |
| !! | ATAAAAAAGTCAAAAGAATC+AGG | - | chr8_2:19630542-19630561 | None:intergenic | 20.0% |
| !!! | AAGGTTTTAAATTACAATTG+CGG | - | chr8_2:19631165-19631184 | None:intergenic | 20.0% |
| !!! | TTTGATTTCATTGACATTTA+TGG | + | chr8_2:19631487-19631506 | Msa1238810:CDS | 20.0% |
| !! | AATCCATAAATCAATTTGAT+AGG | - | chr8_2:19631556-19631575 | None:intergenic | 20.0% |
| !! | ATGTCATAGTAAAATAACAA+AGG | - | chr8_2:19631582-19631601 | None:intergenic | 20.0% |
| !!! | TTTGTTATTTTACTATGACA+TGG | + | chr8_2:19631581-19631600 | Msa1238810:intron | 20.0% |
| !! | AAAGATAAAGAAAAATTGGA+GGG | - | chr8_2:19632071-19632090 | None:intergenic | 20.0% |
| !! | AAAAGATAAAGAAAAATTGG+AGG | - | chr8_2:19632072-19632091 | None:intergenic | 20.0% |
| !!! | TAGGATATGTTATTCTTTTA+AGG | - | chr8_2:19632111-19632130 | None:intergenic | 20.0% |
| !! | ATATAATCAATGATCAAGAT+AGG | - | chr8_2:19632212-19632231 | None:intergenic | 20.0% |
| !! | ATATTTATTGAATACAAGTG+AGG | + | chr8_2:19632477-19632496 | Msa1238810:three_prime_UTR | 20.0% |
| !! | TACATACAATAAGTTAACAA+CGG | - | chr8_2:19632504-19632523 | None:intergenic | 20.0% |
| ! | GGCAATATACATAGTTTAAA+TGG | - | chr8_2:19627194-19627213 | None:intergenic | 25.0% |
| ! | ATTAAACACATCTACACAAA+TGG | - | chr8_2:19627215-19627234 | None:intergenic | 25.0% |
| ! | AATTAAAACAAGTCCTACAT+AGG | + | chr8_2:19627470-19627489 | Msa1238810:intron | 25.0% |
| ! | ATTAAAACAAGTCCTACATA+GGG | + | chr8_2:19627471-19627490 | Msa1238810:intron | 25.0% |
| !! | GACAATTTTTCATTTGAAAG+TGG | + | chr8_2:19627538-19627557 | Msa1238810:intron | 25.0% |
| !!! | TTTTTAAAACTTTTGTCTGC+AGG | + | chr8_2:19627770-19627789 | Msa1238810:intron | 25.0% |
| ! | AAAAAATGAGAGGATATGAA+AGG | - | chr8_2:19627893-19627912 | None:intergenic | 25.0% |
| ! | TTATTGCCATTATTAGAAGT+TGG | + | chr8_2:19627915-19627934 | Msa1238810:intron | 25.0% |
| ! | AAGATTCCAACTTCTAATAA+TGG | - | chr8_2:19627924-19627943 | None:intergenic | 25.0% |
| ! | ATGAGATGATAAATTTCCAT+TGG | - | chr8_2:19628325-19628344 | None:intergenic | 25.0% |
| ! | AATGGAAATTTATCATCTCA+TGG | + | chr8_2:19628324-19628343 | Msa1238810:CDS | 25.0% |
| ! | ATGCTGAAATAATATATTGG+AGG | - | chr8_2:19628579-19628598 | None:intergenic | 25.0% |
| !!! | TATTTTAATCAACACTGGTA+AGG | - | chr8_2:19629169-19629188 | None:intergenic | 25.0% |
| !!! | CTATGTATTTTAATCAACAC+TGG | - | chr8_2:19629174-19629193 | None:intergenic | 25.0% |
| ! | ACTTGATAAAACAGTTTCAT+GGG | + | chr8_2:19629359-19629378 | Msa1238810:intron | 25.0% |
| !! | ATCTAAAGCTACATTTCAAT+TGG | - | chr8_2:19629467-19629486 | None:intergenic | 25.0% |
| ! | GTTAAAATTAGCTACTCTTA+TGG | + | chr8_2:19630174-19630193 | Msa1238810:intron | 25.0% |
| ! | CAAATTTGTAAAAGGTTTCA+CGG | - | chr8_2:19630229-19630248 | None:intergenic | 25.0% |
| !!! | CTTTTTTATATTCCTTTGAC+AGG | + | chr8_2:19630553-19630572 | Msa1238810:intron | 25.0% |
| ! | TTGATCATACACTTATCAAA+TGG | - | chr8_2:19630960-19630979 | None:intergenic | 25.0% |
| !! | TGTGATTTTATGCAATATCA+AGG | + | chr8_2:19631115-19631134 | Msa1238810:intron | 25.0% |
| !! | ATGTGTATTTTACATTACTG+CGG | + | chr8_2:19631407-19631426 | Msa1238810:intron | 25.0% |
| !! | CATCCTATCAAATTGATTTA+TGG | + | chr8_2:19631550-19631569 | Msa1238810:intron | 25.0% |
| !!! | TGGTCGTTTTTCATAAATAA+TGG | + | chr8_2:19631659-19631678 | Msa1238810:intron | 25.0% |
| ! | AAGTTACATGTCATGAATTA+TGG | + | chr8_2:19631860-19631879 | Msa1238810:intron | 25.0% |
| ! | AACATATCCTAAAATGAAGT+TGG | + | chr8_2:19632120-19632139 | Msa1238810:intron | 25.0% |
| ! | ATGATATATCTATGCTATCA+TGG | + | chr8_2:19632181-19632200 | Msa1238810:intron | 25.0% |
| AAACTTTATTAGTAGAGGTG+AGG | + | chr8_2:19627380-19627399 | Msa1238810:intron | 30.0% | |
| AACTTTATTAGTAGAGGTGA+GGG | + | chr8_2:19627381-19627400 | Msa1238810:intron | 30.0% | |
| TCCAATAAAATGTGCATTCA+CGG | - | chr8_2:19627820-19627839 | None:intergenic | 30.0% | |
| GGCAATAACAAAAAAATGAG+AGG | - | chr8_2:19627903-19627922 | None:intergenic | 30.0% | |
| TTCTTGTGAATTATCTAGTC+AGG | + | chr8_2:19627975-19627994 | Msa1238810:intron | 30.0% | |
| TACTACTTGACTCAAACTAT+AGG | + | chr8_2:19628130-19628149 | Msa1238810:CDS | 30.0% | |
| GAACTTAGAGATCTATGTAA+CGG | + | chr8_2:19628156-19628175 | Msa1238810:CDS | 30.0% | |
| AACTTAGAGATCTATGTAAC+GGG | + | chr8_2:19628157-19628176 | Msa1238810:CDS | 30.0% | |
| AATTTATCATCTCATGGTAG+AGG | + | chr8_2:19628330-19628349 | Msa1238810:CDS | 30.0% | |
| ! | TGGAGGAAAAAACTTTAGAA+AGG | - | chr8_2:19628562-19628581 | None:intergenic | 30.0% |
| TATCATTTCACTGTCTTTAC+AGG | + | chr8_2:19628658-19628677 | Msa1238810:CDS | 30.0% | |
| AACTAAGAATCAGAAACACT+GGG | - | chr8_2:19628727-19628746 | None:intergenic | 30.0% | |
| AAACTAAGAATCAGAAACAC+TGG | - | chr8_2:19628728-19628747 | None:intergenic | 30.0% | |
| ! | AAAGAGGAAAGTAAAGTACT+TGG | + | chr8_2:19628805-19628824 | Msa1238810:CDS | 30.0% |
| AAATCAAGGTTTGTGAACTA+CGG | - | chr8_2:19629017-19629036 | None:intergenic | 30.0% | |
| TTGTATTACTAAAAAGCCCT+TGG | + | chr8_2:19629091-19629110 | Msa1238810:intron | 30.0% | |
| TGTATTACTAAAAAGCCCTT+GGG | + | chr8_2:19629092-19629111 | Msa1238810:intron | 30.0% | |
| AGATTCTATTAAGCCATTTC+AGG | + | chr8_2:19629195-19629214 | Msa1238810:intron | 30.0% | |
| !! | TATTAAGCCATTTCAGGTTA+TGG | + | chr8_2:19629201-19629220 | Msa1238810:intron | 30.0% |
| !! | ATTAAGCCATTTCAGGTTAT+GGG | + | chr8_2:19629202-19629221 | Msa1238810:intron | 30.0% |
| CACTTGATAAAACAGTTTCA+TGG | + | chr8_2:19629358-19629377 | Msa1238810:intron | 30.0% | |
| AAAATAAGGCAAGAAGTCAT+TGG | - | chr8_2:19629561-19629580 | None:intergenic | 30.0% | |
| !!! | TTTTTTCTGAATGATGTCGT+GGG | - | chr8_2:19629700-19629719 | None:intergenic | 30.0% |
| !!! | TTTTTTTCTGAATGATGTCG+TGG | - | chr8_2:19629701-19629720 | None:intergenic | 30.0% |
| AAAAAAATGCTGATCCCAAA+AGG | + | chr8_2:19629714-19629733 | Msa1238810:CDS | 30.0% | |
| GTATGATCTATATCCATGAA+AGG | + | chr8_2:19629825-19629844 | Msa1238810:intron | 30.0% | |
| GAAGATTAGAAATTACTCAG+AGG | - | chr8_2:19630133-19630152 | None:intergenic | 30.0% | |
| ! | TTTTAACCATTCATCTTGCA+TGG | - | chr8_2:19630161-19630180 | None:intergenic | 30.0% |
| ! | TTATTTTCATGAAGTTCGTC+TGG | + | chr8_2:19630259-19630278 | Msa1238810:intron | 30.0% |
| ! | TATTTTCATGAAGTTCGTCT+GGG | + | chr8_2:19630260-19630279 | Msa1238810:intron | 30.0% |
| TAACATGATTACCAAGTGAA+TGG | - | chr8_2:19630476-19630495 | None:intergenic | 30.0% | |
| AAACAAAATTCTCCTGTCAA+AGG | - | chr8_2:19630568-19630587 | None:intergenic | 30.0% | |
| TGATAAGTGTATGATCAAGT+TGG | + | chr8_2:19630962-19630981 | Msa1238810:intron | 30.0% | |
| AATTAATTGCTAACGAAGCA+AGG | - | chr8_2:19631184-19631203 | None:intergenic | 30.0% | |
| AACCAACTAAGAAATCAACT+AGG | + | chr8_2:19631240-19631259 | Msa1238810:intron | 30.0% | |
| TACATATGCAGTTATGAAGT+AGG | + | chr8_2:19631379-19631398 | Msa1238810:intron | 30.0% | |
| GAAATCAAAAAGAAGCTACA+AGG | - | chr8_2:19631476-19631495 | None:intergenic | 30.0% | |
| ! | GCTTTTATTACCATCTTTTG+AGG | + | chr8_2:19631692-19631711 | Msa1238810:intron | 30.0% |
| ! | TCCTAAAATGAAGTTGGTTA+TGG | + | chr8_2:19632126-19632145 | Msa1238810:intron | 30.0% |
| ATCATAAACTTTAACCGAAG+AGG | - | chr8_2:19632166-19632185 | None:intergenic | 30.0% | |
| ATTGATTAACTATCACTGCT+TGG | + | chr8_2:19632248-19632267 | Msa1238810:intron | 30.0% | |
| GGATACTAAATGGAAGAAAT+AGG | - | chr8_2:19632397-19632416 | None:intergenic | 30.0% | |
| ATTTCTTCCATTTAGTATCC+TGG | + | chr8_2:19632397-19632416 | Msa1238810:three_prime_UTR | 30.0% | |
| ! | AATTTCTTGGGTTCTAATCA+AGG | - | chr8_2:19632424-19632443 | None:intergenic | 30.0% |
| TTAGAACCCAAGAAATTATC+AGG | + | chr8_2:19632427-19632446 | Msa1238810:three_prime_UTR | 30.0% | |
| TAGAACCCAAGAAATTATCA+GGG | + | chr8_2:19632428-19632447 | Msa1238810:three_prime_UTR | 30.0% | |
| ATGGAAACGAAAGCTTATGT+TGG | - | chr8_2:19626882-19626901 | None:intergenic | 35.0% | |
| ! | AACTACCTCTAGTTTCTGAA+CGG | - | chr8_2:19626988-19627007 | None:intergenic | 35.0% |
| AATTCGTAAGATCGTGAACT+TGG | - | chr8_2:19627114-19627133 | None:intergenic | 35.0% | |
| ACTTTATTAGTAGAGGTGAG+GGG | + | chr8_2:19627382-19627401 | Msa1238810:intron | 35.0% | |
| TCCTACATAGGGATTAAGAA+AGG | + | chr8_2:19627482-19627501 | Msa1238810:intron | 35.0% | |
| ACCTTTCTTAATCCCTATGT+AGG | - | chr8_2:19627486-19627505 | None:intergenic | 35.0% | |
| ! | AACTTTTGTCTGCAGGAATA+TGG | + | chr8_2:19627777-19627796 | Msa1238810:intron | 35.0% |
| ! | ACTTTTGTCTGCAGGAATAT+GGG | + | chr8_2:19627778-19627797 | Msa1238810:intron | 35.0% |
| GGAATCTTACTAGACATAAG+AGG | + | chr8_2:19627936-19627955 | Msa1238810:intron | 35.0% | |
| TTCAGAGTAATCATAGTGTG+GGG | - | chr8_2:19628025-19628044 | None:intergenic | 35.0% | |
| CTTCAGAGTAATCATAGTGT+GGG | - | chr8_2:19628026-19628045 | None:intergenic | 35.0% | |
| TTTGAGTCAAGTAGTAGTGA+AGG | - | chr8_2:19628126-19628145 | None:intergenic | 35.0% | |
| TCTCATGGTAGAGGATATTA+TGG | + | chr8_2:19628339-19628358 | Msa1238810:CDS | 35.0% | |
| CTCATGGTAGAGGATATTAT+GGG | + | chr8_2:19628340-19628359 | Msa1238810:CDS | 35.0% | |
| AAGCACTTGATTGAGCTAAA+GGG | - | chr8_2:19628389-19628408 | None:intergenic | 35.0% | |
| TCTCGTTCAAAATGACTTTG+TGG | - | chr8_2:19628620-19628639 | None:intergenic | 35.0% | |
| TGAACGAGAAGATGATGATT+TGG | + | chr8_2:19628631-19628650 | Msa1238810:CDS | 35.0% | |
| AATTTAGACTGCAGAGAAAG+AGG | + | chr8_2:19628759-19628778 | Msa1238810:intron | 35.0% | |
| ! | ATGAATTGGGTGGTTCTATA+TGG | + | chr8_2:19628960-19628979 | Msa1238810:intron | 35.0% |
| GTATTACTAAAAAGCCCTTG+GGG | + | chr8_2:19629093-19629112 | Msa1238810:intron | 35.0% | |
| AATCAACACTGGTAAGGAAT+GGG | - | chr8_2:19629163-19629182 | None:intergenic | 35.0% | |
| TAATCAACACTGGTAAGGAA+TGG | - | chr8_2:19629164-19629183 | None:intergenic | 35.0% | |
| AAATGTGTTGCGTGATAAGA+AGG | - | chr8_2:19629329-19629348 | None:intergenic | 35.0% | |
| TATCTTATCCAAGTGAAGTC+AGG | + | chr8_2:19629433-19629452 | Msa1238810:intron | 35.0% | |
| GCTACATTTCAATTGGATGA+TGG | - | chr8_2:19629460-19629479 | None:intergenic | 35.0% | |
| !!! | TGCCTTATTTTGCAATACAG+TGG | + | chr8_2:19629570-19629589 | Msa1238810:intron | 35.0% |
| !!! | GCCTTATTTTGCAATACAGT+GGG | + | chr8_2:19629571-19629590 | Msa1238810:intron | 35.0% |
| !!! | CCTTATTTTGCAATACAGTG+GGG | + | chr8_2:19629572-19629591 | Msa1238810:intron | 35.0% |
| TAATAACTGAGATGCTGAAC+TGG | - | chr8_2:19629750-19629769 | None:intergenic | 35.0% | |
| TTGTCTTATCAACTGAGTCT+CGG | - | chr8_2:19629774-19629793 | None:intergenic | 35.0% | |
| !! | TCAGTTGATAAGACAACAAC+AGG | + | chr8_2:19629778-19629797 | Msa1238810:CDS | 35.0% |
| ATAGATCATACAGCCATTAC+AGG | - | chr8_2:19629816-19629835 | None:intergenic | 35.0% | |
| CAGGTTATGTTATCCTTTCA+TGG | - | chr8_2:19629841-19629860 | None:intergenic | 35.0% | |
| TTCTTCTTGCTTTGACGAAT+GGG | - | chr8_2:19629951-19629970 | None:intergenic | 35.0% | |
| TTTCTTCTTGCTTTGACGAA+TGG | - | chr8_2:19629952-19629971 | None:intergenic | 35.0% | |
| CAAAAATACGCGTGAAAGAA+CGG | + | chr8_2:19629976-19629995 | Msa1238810:CDS | 35.0% | |
| GTGAAAGAACGGTAATACAT+TGG | + | chr8_2:19629987-19630006 | Msa1238810:intron | 35.0% | |
| !!! | TTTTTTTTTCCGCTGACCAT+TGG | + | chr8_2:19630065-19630084 | Msa1238810:intron | 35.0% |
| CTAAGATACTTGACCATACA+AGG | - | chr8_2:19630096-19630115 | None:intergenic | 35.0% | |
| ! | AAGTTGACGTGTCTTTTGTA+TGG | + | chr8_2:19630514-19630533 | Msa1238810:intron | 35.0% |
| !! | CAGGAGAATTTTGTTTCCAT+TGG | + | chr8_2:19630572-19630591 | Msa1238810:intron | 35.0% |
| !! | CAGTACTGTTCTAAAACCAA+TGG | - | chr8_2:19630591-19630610 | None:intergenic | 35.0% |
| AACAGTGTTTACCTATTTGC+AGG | + | chr8_2:19630611-19630630 | Msa1238810:intron | 35.0% | |
| !!! | ATTGCTTTTTCATCGCCTAA+GGG | - | chr8_2:19630687-19630706 | None:intergenic | 35.0% |
| !!! | AATTGCTTTTTCATCGCCTA+AGG | - | chr8_2:19630688-19630707 | None:intergenic | 35.0% |
| ! | TACTATTGTTGTTCGAATGC+CGG | + | chr8_2:19630707-19630726 | Msa1238810:CDS | 35.0% |
| TCTTCAAAACTGACAAGCTT+CGG | + | chr8_2:19630754-19630773 | Msa1238810:CDS | 35.0% | |
| ! | TGTTTGCTAGGAAGAATACA+AGG | - | chr8_2:19630815-19630834 | None:intergenic | 35.0% |
| AGTACAAAAGGATGTTTGCT+AGG | - | chr8_2:19630827-19630846 | None:intergenic | 35.0% | |
| ! | GACAAGGTTGAACTTTAAAG+GGG | - | chr8_2:19630858-19630877 | None:intergenic | 35.0% |
| GGACAAGGTTGAACTTTAAA+GGG | - | chr8_2:19630859-19630878 | None:intergenic | 35.0% | |
| !!! | ATTCTAGTTTTCAGACCGTA+GGG | - | chr8_2:19630880-19630899 | None:intergenic | 35.0% |
| !!! | AATTCTAGTTTTCAGACCGT+AGG | - | chr8_2:19630881-19630900 | None:intergenic | 35.0% |
| ACTTAAAACCATGCTACCAA+GGG | - | chr8_2:19630989-19631008 | None:intergenic | 35.0% | |
| AACTTAAAACCATGCTACCA+AGG | - | chr8_2:19630990-19631009 | None:intergenic | 35.0% | |
| TAATTGCGACAGCAACATAA+TGG | + | chr8_2:19631024-19631043 | Msa1238810:intron | 35.0% | |
| ! | CAGCAACATAATGGTTTTTG+TGG | + | chr8_2:19631033-19631052 | Msa1238810:intron | 35.0% |
| ! | GTCCTAGTTGATTTCTTAGT+TGG | - | chr8_2:19631245-19631264 | None:intergenic | 35.0% |
| TACTGATGCTTTCTTTAGCT+GGG | + | chr8_2:19631286-19631305 | Msa1238810:intron | 35.0% | |
| TTTACATTACTGCGGTAGTT+TGG | + | chr8_2:19631415-19631434 | Msa1238810:intron | 35.0% | |
| AGAAACACTCACAACTCTAT+AGG | - | chr8_2:19631530-19631549 | None:intergenic | 35.0% | |
| TTGTTGCTAAAGATGTTCAG+TGG | + | chr8_2:19631616-19631635 | Msa1238810:intron | 35.0% | |
| ! | GCCATAACCAACTTCATTTT+AGG | - | chr8_2:19632130-19632149 | None:intergenic | 35.0% |
| ! | CACTCAATTTTGTTCCTCTT+CGG | + | chr8_2:19632149-19632168 | Msa1238810:intron | 35.0% |
| !! | TCTGCTACTTTGAATGAAGT+AGG | + | chr8_2:19632325-19632344 | Msa1238810:CDS | 35.0% |
| !! | CAAGAATGAGGCTTTATTTC+TGG | + | chr8_2:19632357-19632376 | Msa1238810:CDS | 35.0% |
| TTATGTTGGTGTGAGAGGAA+AGG | - | chr8_2:19626868-19626887 | None:intergenic | 40.0% | |
| AAAGCTTATGTTGGTGTGAG+AGG | - | chr8_2:19626873-19626892 | None:intergenic | 40.0% | |
| CATTGCGCACAAAATGTTGA+TGG | - | chr8_2:19626901-19626920 | None:intergenic | 40.0% | |
| AATCTTCATAGCAAGTGTGC+CGG | - | chr8_2:19627681-19627700 | None:intergenic | 40.0% | |
| ! | CTTTTGTCTGCAGGAATATG+GGG | + | chr8_2:19627779-19627798 | Msa1238810:intron | 40.0% |
| ! | TTTTGTCTGCAGGAATATGG+GGG | + | chr8_2:19627780-19627799 | Msa1238810:intron | 40.0% |
| ! | GCCGTGAATGCACATTTTAT+TGG | + | chr8_2:19627816-19627835 | Msa1238810:CDS | 40.0% |
| GCTTCAGAGTAATCATAGTG+TGG | - | chr8_2:19628027-19628046 | None:intergenic | 40.0% | |
| AAAACAACCAAAACCGTGCT+GGG | + | chr8_2:19628055-19628074 | Msa1238810:CDS | 40.0% | |
| ! | CTTCTAGCAGCATTGAACAA+AGG | - | chr8_2:19628096-19628115 | None:intergenic | 40.0% |
| !! | AGAGATCTATGTAACGGGTT+TGG | + | chr8_2:19628162-19628181 | Msa1238810:CDS | 40.0% |
| GAATTTCCTACAGGGATCAA+TGG | + | chr8_2:19628243-19628262 | Msa1238810:CDS | 40.0% | |
| !! | AATCCAGGTTGATACTGGTA+GGG | - | chr8_2:19628282-19628301 | None:intergenic | 40.0% |
| TACCAGTATCAACCTGGATT+GGG | + | chr8_2:19628282-19628301 | Msa1238810:CDS | 40.0% | |
| ! | GAAGCACTTGATTGAGCTAA+AGG | - | chr8_2:19628390-19628409 | None:intergenic | 40.0% |
| AAGAATCAGAAACACTGGGA+AGG | - | chr8_2:19628723-19628742 | None:intergenic | 40.0% | |
| CAGAGAAAGAGGAAGCAATA+CGG | + | chr8_2:19628770-19628789 | Msa1238810:CDS | 40.0% | |
| AGAGAAAGAGGAAGCAATAC+GGG | + | chr8_2:19628771-19628790 | Msa1238810:CDS | 40.0% | |
| CACTAACAGAAGCAAACTAG+AGG | + | chr8_2:19628867-19628886 | Msa1238810:CDS | 40.0% | |
| TAACAGAAGCAAACTAGAGG+TGG | + | chr8_2:19628870-19628889 | Msa1238810:intron | 40.0% | |
| AACAGAAGCAAACTAGAGGT+GGG | + | chr8_2:19628871-19628890 | Msa1238810:intron | 40.0% | |
| ! | TTTTACACACGCATGACTCT+TGG | + | chr8_2:19628916-19628935 | Msa1238810:intron | 40.0% |
| TTTACACACGCATGACTCTT+GGG | + | chr8_2:19628917-19628936 | Msa1238810:intron | 40.0% | |
| ! | AGCAGAGGCATACAATGAAT+TGG | + | chr8_2:19628946-19628965 | Msa1238810:intron | 40.0% |
| ! | GCAGAGGCATACAATGAATT+GGG | + | chr8_2:19628947-19628966 | Msa1238810:intron | 40.0% |
| ! | AATTGGGTGGTTCTATATGG+AGG | + | chr8_2:19628963-19628982 | Msa1238810:intron | 40.0% |
| TACGGAAAATGGAATGACCA+TGG | - | chr8_2:19628999-19629018 | None:intergenic | 40.0% | |
| GGTTTGTGAACTACGGAAAA+TGG | - | chr8_2:19629010-19629029 | None:intergenic | 40.0% | |
| AGAACCACATATAACCCCAA+GGG | - | chr8_2:19629110-19629129 | None:intergenic | 40.0% | |
| CCCCACTGTATTGCAAAATA+AGG | - | chr8_2:19629575-19629594 | None:intergenic | 40.0% | |
| ! | TATTTTGCAATACAGTGGGG+TGG | + | chr8_2:19629575-19629594 | Msa1238810:intron | 40.0% |
| CTGATTGAAACTGCGCTTTA+TGG | + | chr8_2:19629629-19629648 | Msa1238810:CDS | 40.0% | |
| GTTTAGACTCTTGCCTGTAA+TGG | + | chr8_2:19629800-19629819 | Msa1238810:intron | 40.0% | |
| ACCTGTCAACATCTTTATGC+AGG | + | chr8_2:19629856-19629875 | Msa1238810:intron | 40.0% | |
| TCCTGCATAAAGATGTTGAC+AGG | - | chr8_2:19629860-19629879 | None:intergenic | 40.0% | |
| TTCATAGCTCAGCTAACAGT+CGG | - | chr8_2:19630035-19630054 | None:intergenic | 40.0% | |
| ACCATTGGATCATCCTTGTA+TGG | + | chr8_2:19630080-19630099 | Msa1238810:intron | 40.0% | |
| ACCATACAAGGATGATCCAA+TGG | - | chr8_2:19630084-19630103 | None:intergenic | 40.0% | |
| CAGTATCCATGCAAGATGAA+TGG | + | chr8_2:19630152-19630171 | Msa1238810:intron | 40.0% | |
| CTCTTATGGATGAGAAACAG+AGG | + | chr8_2:19630188-19630207 | Msa1238810:intron | 40.0% | |
| CACAAAGAAGTCAAACATGC+AGG | - | chr8_2:19630292-19630311 | None:intergenic | 40.0% | |
| ! | CTGCATGTTTGACTTCTTTG+TGG | + | chr8_2:19630290-19630309 | Msa1238810:intron | 40.0% |
| TGACACATGCAAAAGACGAA+TGG | - | chr8_2:19630394-19630413 | None:intergenic | 40.0% | |
| TGGTGCATGTTCAAAAGACA+AGG | - | chr8_2:19630456-19630475 | None:intergenic | 40.0% | |
| TTGAACATGCACCATTCACT+TGG | + | chr8_2:19630462-19630481 | Msa1238810:intron | 40.0% | |
| GTTTACCTATTTGCAGGAAC+TGG | + | chr8_2:19630617-19630636 | Msa1238810:intron | 40.0% | |
| TTTCTCCAGTTCCTGCAAAT+AGG | - | chr8_2:19630625-19630644 | None:intergenic | 40.0% | |
| CTTCAAAACTGACAAGCTTC+GGG | + | chr8_2:19630755-19630774 | Msa1238810:CDS | 40.0% | |
| ! | TGAACTTTAAAGGGGTTGGT+AGG | - | chr8_2:19630850-19630869 | None:intergenic | 40.0% |
| ! | AGGTTGAACTTTAAAGGGGT+TGG | - | chr8_2:19630854-19630873 | None:intergenic | 40.0% |
| GGGACAAGGTTGAACTTTAA+AGG | - | chr8_2:19630860-19630879 | None:intergenic | 40.0% | |
| AAAGTTCAACCTTGTCCCTA+CGG | + | chr8_2:19630862-19630881 | Msa1238810:intron | 40.0% | |
| !!! | GGTAGCATGGTTTTAAGTTG+CGG | + | chr8_2:19630991-19631010 | Msa1238810:intron | 40.0% |
| CTACTGATGCTTTCTTTAGC+TGG | + | chr8_2:19631285-19631304 | Msa1238810:intron | 40.0% | |
| ATGAGAGAGATGAAACAGGA+AGG | + | chr8_2:19631309-19631328 | Msa1238810:intron | 40.0% | |
| TGACATTTATGGAGCAGTGA+AGG | + | chr8_2:19631498-19631517 | Msa1238810:CDS | 40.0% | |
| TTGCTAAAGATGTTCAGTGG+TGG | + | chr8_2:19631619-19631638 | Msa1238810:intron | 40.0% | |
| TGGCATAATCTGTTGTCAAG+TGG | + | chr8_2:19631639-19631658 | Msa1238810:intron | 40.0% | |
| TTGAGGATGTCACGCTTTAT+AGG | + | chr8_2:19631709-19631728 | Msa1238810:intron | 40.0% | |
| GACATAAACCTAACTCAGAC+AGG | - | chr8_2:19632049-19632068 | None:intergenic | 40.0% | |
| GTATGACCTTACCTGTTCAA+AGG | - | chr8_2:19632275-19632294 | None:intergenic | 40.0% | |
| TTAACATTGTATGCTCGTCG+CGG | - | chr8_2:19632298-19632317 | None:intergenic | 40.0% | |
| AAGCCTCATTCTTGTTGCTA+AGG | - | chr8_2:19632351-19632370 | None:intergenic | 40.0% | |
| TCAAGGACCAGGATACTAAA+TGG | - | chr8_2:19632407-19632426 | None:intergenic | 40.0% | |
| TGAGAGGAAAGGTGAAGAGA+TGG | - | chr8_2:19626857-19626876 | None:intergenic | 45.0% | |
| ATTAGTAGAGGTGAGGGGTT+TGG | + | chr8_2:19627387-19627406 | Msa1238810:intron | 45.0% | |
| TTAGTAGAGGTGAGGGGTTT+GGG | + | chr8_2:19627388-19627407 | Msa1238810:intron | 45.0% | |
| ATCTTCATAGCAAGTGTGCC+GGG | - | chr8_2:19627680-19627699 | None:intergenic | 45.0% | |
| CAAAACAACCAAAACCGTGC+TGG | + | chr8_2:19628054-19628073 | Msa1238810:CDS | 45.0% | |
| AGGCAAGGGAATTTCCTACA+GGG | + | chr8_2:19628235-19628254 | Msa1238810:CDS | 45.0% | |
| !! | CAATCCAGGTTGATACTGGT+AGG | - | chr8_2:19628283-19628302 | None:intergenic | 45.0% |
| CTACCAGTATCAACCTGGAT+TGG | + | chr8_2:19628281-19628300 | Msa1238810:CDS | 45.0% | |
| !! | TATGCAGGTGCTGATACCAA+TGG | + | chr8_2:19628306-19628325 | Msa1238810:CDS | 45.0% |
| ACGTGTTCATGAAGATGCAG+AGG | + | chr8_2:19628410-19628429 | Msa1238810:CDS | 45.0% | |
| TGCAATAGAAGCCTCGAAGA+AGG | + | chr8_2:19628449-19628468 | Msa1238810:CDS | 45.0% | |
| TTCTCTGATCTCCTTCTTCG+AGG | - | chr8_2:19628463-19628482 | None:intergenic | 45.0% | |
| ! | TGCTCATGCTTTATTAGCCG+AGG | + | chr8_2:19628828-19628847 | Msa1238810:CDS | 45.0% |
| ! | GCTCATGCTTTATTAGCCGA+GGG | + | chr8_2:19628829-19628848 | Msa1238810:CDS | 45.0% |
| GTTAGTAGTTCTCTCTCCCT+CGG | - | chr8_2:19628848-19628867 | None:intergenic | 45.0% | |
| ACTCTTGGGTGTTAAAGCAG+AGG | + | chr8_2:19628931-19628950 | Msa1238810:intron | 45.0% | |
| GAGGCATACAATGAATTGGG+TGG | + | chr8_2:19628950-19628969 | Msa1238810:intron | 45.0% | |
| AAAGCCCTTGGGGTTATATG+TGG | + | chr8_2:19629103-19629122 | Msa1238810:intron | 45.0% | |
| CAGAACCACATATAACCCCA+AGG | - | chr8_2:19629111-19629130 | None:intergenic | 45.0% | |
| GAATGGGCATGGACAAAAGT+AGG | - | chr8_2:19629147-19629166 | None:intergenic | 45.0% | |
| CGACATCCCATAACCTGAAA+TGG | - | chr8_2:19629211-19629230 | None:intergenic | 45.0% | |
| ATGATGGTCCTGACTTCACT+TGG | - | chr8_2:19629444-19629463 | None:intergenic | 45.0% | |
| GCTTTGCATCACACACTCTT+GGG | - | chr8_2:19629513-19629532 | None:intergenic | 45.0% | |
| AGCTTTGCATCACACACTCT+TGG | - | chr8_2:19629514-19629533 | None:intergenic | 45.0% | |
| AATGCTTCATTGAGCTCGTC+AGG | - | chr8_2:19629608-19629627 | None:intergenic | 45.0% | |
| AAATGCTGATCCCAAAAGGC+AGG | + | chr8_2:19629718-19629737 | Msa1238810:CDS | 45.0% | |
| AATGCTGATCCCAAAAGGCA+GGG | + | chr8_2:19629719-19629738 | Msa1238810:CDS | 45.0% | |
| AAGGATGATCCAATGGTCAG+CGG | - | chr8_2:19630077-19630096 | None:intergenic | 45.0% | |
| TTGCAGGAACTGGAGAAAAC+AGG | + | chr8_2:19630627-19630646 | Msa1238810:intron | 45.0% | |
| CTTCCAAATGAACCACCCTT+AGG | + | chr8_2:19630669-19630688 | Msa1238810:CDS | 45.0% | |
| ! | ATTGTTGTTCGAATGCCGGA+CGG | + | chr8_2:19630711-19630730 | Msa1238810:CDS | 45.0% |
| CACACTCTTCCAACTTTGCA+AGG | + | chr8_2:19630910-19630929 | Msa1238810:intron | 45.0% | |
| CAAATGGTTACCACAACTCC+TGG | - | chr8_2:19630944-19630963 | None:intergenic | 45.0% | |
| !! | GTATGATCAAGTTGGTCCCT+TGG | + | chr8_2:19630970-19630989 | Msa1238810:intron | 45.0% |
| TGGGATGAGAGAGATGAAAC+AGG | + | chr8_2:19631305-19631324 | Msa1238810:intron | 45.0% | |
| ATTTATGGAGCAGTGAAGGC+TGG | + | chr8_2:19631502-19631521 | Msa1238810:CDS | 45.0% | |
| AGCGTGACATCCTCAAAAGA+TGG | - | chr8_2:19631705-19631724 | None:intergenic | 45.0% | |
| ACTCTCAACCTGTCTGAGTT+AGG | + | chr8_2:19632038-19632057 | Msa1238810:intron | 45.0% | |
| CTTGGACCTTTGAACAGGTA+AGG | + | chr8_2:19632266-19632285 | Msa1238810:intron | 45.0% | |
| TAACATTGTATGCTCGTCGC+GGG | - | chr8_2:19632297-19632316 | None:intergenic | 45.0% | |
| AGGCCTTAGCAACAAGAATG+AGG | + | chr8_2:19632345-19632364 | Msa1238810:CDS | 45.0% | |
| ! | TTGGGTTCTAATCAAGGACC+AGG | - | chr8_2:19632418-19632437 | None:intergenic | 45.0% |
| GAGCGCCCTGATAATTTCTT+GGG | - | chr8_2:19632436-19632455 | None:intergenic | 45.0% | |
| TGAGCGCCCTGATAATTTCT+TGG | - | chr8_2:19632437-19632456 | None:intergenic | 45.0% | |
| ! | GCGCTCATCTGACTTTTCTA+GGG | + | chr8_2:19632450-19632469 | Msa1238810:three_prime_UTR | 45.0% |
| !!! | TTTTTTTAAATAAAATGTTT+AGG | + | chr8_2:19627643-19627662 | Msa1238810:intron | 5.0% |
| ! | ATGAAGGTTGCGACGGATTC+CGG | - | chr8_2:19626936-19626955 | None:intergenic | 50.0% |
| GATACGCATGAAGGTTGCGA+CGG | - | chr8_2:19626943-19626962 | None:intergenic | 50.0% | |
| GCAACCTTCATGCGTATCAC+AGG | + | chr8_2:19626945-19626964 | Msa1238810:CDS | 50.0% | |
| TGCTCCTGTGATACGCATGA+AGG | - | chr8_2:19626952-19626971 | None:intergenic | 50.0% | |
| CATGCGTATCACAGGAGCAA+CGG | + | chr8_2:19626953-19626972 | Msa1238810:CDS | 50.0% | |
| GAGCGTGCGTAAATGTGAAG+TGG | - | chr8_2:19627033-19627052 | None:intergenic | 50.0% | |
| CGAGTGAGTGAATGCGTCTA+AGG | - | chr8_2:19627091-19627110 | None:intergenic | 50.0% | |
| TCTTCATAGCAAGTGTGCCG+GGG | - | chr8_2:19627679-19627698 | None:intergenic | 50.0% | |
| TCAAGTAGTACACCACCACG+TGG | + | chr8_2:19628198-19628217 | Msa1238810:CDS | 50.0% | |
| GAGGCAAGGGAATTTCCTAC+AGG | + | chr8_2:19628234-19628253 | Msa1238810:CDS | 50.0% | |
| TGTGCACCATTGATCCCTGT+AGG | - | chr8_2:19628252-19628271 | None:intergenic | 50.0% | |
| TCACCCTACCAGTATCAACC+TGG | + | chr8_2:19628276-19628295 | Msa1238810:CDS | 50.0% | |
| !! | AGCCCAATCCAGGTTGATAC+TGG | - | chr8_2:19628287-19628306 | None:intergenic | 50.0% |
| ATGGAATGACCATGGCTGCA+CGG | - | chr8_2:19628991-19629010 | None:intergenic | 50.0% | |
| ACACTGGTAAGGAATGGGCA+TGG | - | chr8_2:19629158-19629177 | None:intergenic | 50.0% | |
| GATGTTGCACAACCAGTCAC+TGG | + | chr8_2:19629484-19629503 | Msa1238810:intron | 50.0% | |
| TCTGAATGATGTCGTGGGTC+AGG | - | chr8_2:19629695-19629714 | None:intergenic | 50.0% | |
| ! | CTGGATGAACCCTGCCTTTT+GGG | - | chr8_2:19629731-19629750 | None:intergenic | 50.0% |
| ! | ACTGGATGAACCCTGCCTTT+TGG | - | chr8_2:19629732-19629751 | None:intergenic | 50.0% |
| TCGCCTAAGGGTGGTTCATT+TGG | - | chr8_2:19630675-19630694 | None:intergenic | 50.0% | |
| !!! | GCTTTTTCATCGCCTAAGGG+TGG | - | chr8_2:19630684-19630703 | None:intergenic | 50.0% |
| !! | GGGGTTGGTAGGAGTACAAA+AGG | - | chr8_2:19630839-19630858 | None:intergenic | 50.0% |
| ! | GTTTTCAGACCGTAGGGACA+AGG | - | chr8_2:19630874-19630893 | None:intergenic | 50.0% |
| !! | GAGGGTGTTCCTTGCAAAGT+TGG | - | chr8_2:19630922-19630941 | None:intergenic | 50.0% |
| TGGTTACCACAACTCCTGGA+GGG | - | chr8_2:19630940-19630959 | None:intergenic | 50.0% | |
| ATGGTTACCACAACTCCTGG+AGG | - | chr8_2:19630941-19630960 | None:intergenic | 50.0% | |
| ! | AAGTTGGTCCCTTGGTAGCA+TGG | + | chr8_2:19630978-19630997 | Msa1238810:intron | 50.0% |
| ATTCCACTCGCACATTGTGC+AGG | - | chr8_2:19631749-19631768 | None:intergenic | 50.0% | |
| CACTGCTTGGACCTTTGAAC+AGG | + | chr8_2:19632261-19632280 | Msa1238810:intron | 50.0% | |
| ! | GGCGCTCATCTGACTTTTCT+AGG | + | chr8_2:19632449-19632468 | Msa1238810:three_prime_UTR | 50.0% |
| ! | TGAAGGTTGCGACGGATTCC+GGG | - | chr8_2:19626935-19626954 | None:intergenic | 55.0% |
| CGTCGCCGTTCAGAAACTAG+AGG | + | chr8_2:19626980-19626999 | Msa1238810:CDS | 55.0% | |
| ! | GTTTAGGCGAGTTGAGTCCC+CGG | + | chr8_2:19627659-19627678 | Msa1238810:intron | 55.0% |
| AACCAAAACCGTGCTGGGTC+AGG | + | chr8_2:19628060-19628079 | Msa1238810:CDS | 55.0% | |
| TGATTCCACCTGACCCAGCA+CGG | - | chr8_2:19628071-19628090 | None:intergenic | 55.0% | |
| CACCACGTGGTTCTCCACAA+GGG | + | chr8_2:19628211-19628230 | Msa1238810:CDS | 55.0% | |
| ACCACGTGGTTCTCCACAAG+GGG | + | chr8_2:19628212-19628231 | Msa1238810:CDS | 55.0% | |
| TTCTCCACAAGGGGAGGCAA+GGG | + | chr8_2:19628221-19628240 | Msa1238810:CDS | 55.0% | |
| AATTCCCTTGCCTCCCCTTG+TGG | - | chr8_2:19628228-19628247 | None:intergenic | 55.0% | |
| ! | CAACCTGGATTGGGCTATGC+AGG | + | chr8_2:19628291-19628310 | Msa1238810:CDS | 55.0% |
| ACGGGAGCTTCGAGCAAAAG+AGG | + | chr8_2:19628789-19628808 | Msa1238810:CDS | 55.0% | |
| ACTCTTGGGTCTCCAGTGAC+TGG | - | chr8_2:19629499-19629518 | None:intergenic | 55.0% | |
| TGTCGTGGGTCAGGCAAAGA+TGG | - | chr8_2:19629686-19629705 | None:intergenic | 55.0% | |
| CTTTGCAAGGAACACCCTCC+AGG | + | chr8_2:19630923-19630942 | Msa1238810:intron | 55.0% | |
| CCAGAACTGCAATCGCGATG+TGG | - | chr8_2:19631068-19631087 | None:intergenic | 55.0% | |
| CCACATCGCGATTGCAGTTC+TGG | + | chr8_2:19631065-19631084 | Msa1238810:intron | 55.0% | |
| TGACCTGCACAATGTGCGAG+TGG | + | chr8_2:19631743-19631762 | Msa1238810:intron | 55.0% | |
| CGCAATGACGACACTGTCCC+CGG | + | chr8_2:19626914-19626933 | Msa1238810:exon | 60.0% | |
| ! | GAAGGTTGCGACGGATTCCG+GGG | - | chr8_2:19626934-19626953 | None:intergenic | 60.0% |
| GTAGAGGTGAGGGGTTTGGG+TGG | + | chr8_2:19627391-19627410 | Msa1238810:intron | 60.0% | |
| ! | CACCTGACCCAGCACGGTTT+TGG | - | chr8_2:19628065-19628084 | None:intergenic | 60.0% |
| CAAAACCGTGCTGGGTCAGG+TGG | + | chr8_2:19628063-19628082 | Msa1238810:CDS | 60.0% | |
| CCTTGTGGAGAACCACGTGG+TGG | - | chr8_2:19628213-19628232 | None:intergenic | 60.0% | |
| CCACCACGTGGTTCTCCACA+AGG | + | chr8_2:19628210-19628229 | Msa1238810:CDS | 60.0% | |
| TCCCCTTGTGGAGAACCACG+TGG | - | chr8_2:19628216-19628235 | None:intergenic | 60.0% | |
| ACGTGGTTCTCCACAAGGGG+AGG | + | chr8_2:19628215-19628234 | Msa1238810:CDS | 60.0% | |
| GTTCTCCACAAGGGGAGGCA+AGG | + | chr8_2:19628220-19628239 | Msa1238810:CDS | 60.0% | |
| GCACCTGCATAGCCCAATCC+AGG | - | chr8_2:19628297-19628316 | None:intergenic | 60.0% | |
| ATGGAGGAACCGTGCAGCCA+TGG | + | chr8_2:19628979-19628998 | Msa1238810:intron | 60.0% | |
| GTTGTTCGAATGCCGGACGG+TGG | + | chr8_2:19630714-19630733 | Msa1238810:CDS | 60.0% | |
| CGTTCACAACGACCACCGTC+CGG | - | chr8_2:19630729-19630748 | None:intergenic | 60.0% | |
| GGAACACCCTCCAGGAGTTG+TGG | + | chr8_2:19630931-19630950 | Msa1238810:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 19626833 | 19632555 | 19626833 | ID=Msa1238810;Name=Msa1238810 |
| chr8_2 | mRNA | 19626833 | 19632555 | 19626833 | ID=Msa1238810-mRNA-1;Parent=Msa1238810;Name=Msa1238810-mRNA-1;_AED=0.06;_eAED=0.06;_QI=85|1|1|1|1|1|10|165|500 |
| chr8_2 | exon | 19626833 | 19627001 | 19626833 | ID=Msa1238810-mRNA-1:exon:7227;Parent=Msa1238810-mRNA-1 |
| chr8_2 | exon | 19627792 | 19627850 | 19627792 | ID=Msa1238810-mRNA-1:exon:7228;Parent=Msa1238810-mRNA-1 |
| chr8_2 | exon | 19627993 | 19628506 | 19627993 | ID=Msa1238810-mRNA-1:exon:7229;Parent=Msa1238810-mRNA-1 |
| chr8_2 | exon | 19628596 | 19628679 | 19628596 | ID=Msa1238810-mRNA-1:exon:7230;Parent=Msa1238810-mRNA-1 |
| chr8_2 | exon | 19628766 | 19628888 | 19628766 | ID=Msa1238810-mRNA-1:exon:7231;Parent=Msa1238810-mRNA-1 |
| chr8_2 | exon | 19629590 | 19629799 | 19629590 | ID=Msa1238810-mRNA-1:exon:7232;Parent=Msa1238810-mRNA-1 |
| chr8_2 | exon | 19629878 | 19629997 | 19629878 | ID=Msa1238810-mRNA-1:exon:7233;Parent=Msa1238810-mRNA-1 |
| chr8_2 | exon | 19630633 | 19630776 | 19630633 | ID=Msa1238810-mRNA-1:exon:7234;Parent=Msa1238810-mRNA-1 |
| chr8_2 | exon | 19631481 | 19631537 | 19631481 | ID=Msa1238810-mRNA-1:exon:7235;Parent=Msa1238810-mRNA-1 |
| chr8_2 | exon | 19632283 | 19632555 | 19632283 | ID=Msa1238810-mRNA-1:exon:7236;Parent=Msa1238810-mRNA-1 |
| chr8_2 | five_prime_UTR | 19626833 | 19626917 | 19626833 | ID=Msa1238810-mRNA-1:five_prime_utr;Parent=Msa1238810-mRNA-1 |
| chr8_2 | CDS | 19626918 | 19627001 | 19626918 | ID=Msa1238810-mRNA-1:cds;Parent=Msa1238810-mRNA-1 |
| chr8_2 | CDS | 19627792 | 19627850 | 19627792 | ID=Msa1238810-mRNA-1:cds;Parent=Msa1238810-mRNA-1 |
| chr8_2 | CDS | 19627993 | 19628506 | 19627993 | ID=Msa1238810-mRNA-1:cds;Parent=Msa1238810-mRNA-1 |
| chr8_2 | CDS | 19628596 | 19628679 | 19628596 | ID=Msa1238810-mRNA-1:cds;Parent=Msa1238810-mRNA-1 |
| chr8_2 | CDS | 19628766 | 19628888 | 19628766 | ID=Msa1238810-mRNA-1:cds;Parent=Msa1238810-mRNA-1 |
| chr8_2 | CDS | 19629590 | 19629799 | 19629590 | ID=Msa1238810-mRNA-1:cds;Parent=Msa1238810-mRNA-1 |
| chr8_2 | CDS | 19629878 | 19629997 | 19629878 | ID=Msa1238810-mRNA-1:cds;Parent=Msa1238810-mRNA-1 |
| chr8_2 | CDS | 19630633 | 19630776 | 19630633 | ID=Msa1238810-mRNA-1:cds;Parent=Msa1238810-mRNA-1 |
| chr8_2 | CDS | 19631481 | 19631537 | 19631481 | ID=Msa1238810-mRNA-1:cds;Parent=Msa1238810-mRNA-1 |
| chr8_2 | CDS | 19632283 | 19632390 | 19632283 | ID=Msa1238810-mRNA-1:cds;Parent=Msa1238810-mRNA-1 |
| chr8_2 | three_prime_UTR | 19632391 | 19632555 | 19632391 | ID=Msa1238810-mRNA-1:three_prime_utr;Parent=Msa1238810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
