AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1371520


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1371520 MtrunA17_Chr1g0157501 99.710 345 1 0 1 345 1 345 0.0 693
Msa1371520 MtrunA17_Chr5g0393381 79.179 341 70 1 5 344 7 347 0.0 532
Msa1371520 MtrunA17_Chr8g0383381 51.692 325 145 3 12 335 14 327 2.46e-106 315
Msa1371520 MtrunA17_Chr3g0129401 50.156 321 147 5 2 316 6 319 2.53e-104 309
Msa1371520 MtrunA17_Chr1g0201531 52.665 319 140 5 2 316 6 317 1.54e-101 301
Msa1371520 MtrunA17_Chr4g0028931 36.446 332 201 2 4 335 3 324 2.57e-66 213
Msa1371520 MtrunA17_Chr6g0467391 39.649 285 170 1 14 298 13 295 2.68e-65 209
Msa1371520 MtrunA17_Chr6g0467371 39.649 285 170 1 14 298 13 295 2.68e-65 209
Msa1371520 MtrunA17_Chr2g0326791 39.298 285 171 1 14 298 13 295 3.05e-65 210
Msa1371520 MtrunA17_Chr3g0128951 39.068 279 168 1 30 308 29 305 1.11e-61 201
Msa1371520 MtrunA17_Chr3g0128961 34.132 334 187 6 30 341 29 351 9.83e-53 178
Msa1371520 MtrunA17_Chr5g0446851 31.889 323 207 5 15 332 59 373 1.15e-27 111
Msa1371520 MtrunA17_Chr2g0298931 29.781 319 205 9 19 332 62 366 1.15e-25 105
Msa1371520 MtrunA17_Chr3g0114581 25.000 252 187 2 82 332 88 338 7.71e-17 80.5
Msa1371520 MtrunA17_Chr1g0160071 23.373 338 224 9 16 337 22 340 8.22e-15 74.3
Msa1371520 MtrunA17_Chr5g0436341 24.127 315 219 5 1 304 1 306 3.40e-12 66.2
Msa1371520 MtrunA17_Chr4g0008071 26.621 293 186 8 22 297 23 303 4.18e-12 66.2
Msa1371520 MtrunA17_Chr4g0056661 25.763 295 200 8 22 304 63 350 4.68e-12 66.2
Msa1371520 MtrunA17_Chr1g0149401 25.728 206 139 4 100 298 140 338 8.17e-12 65.5
Msa1371520 MtrunA17_Chr3g0112981 23.448 290 213 3 22 304 35 322 1.01e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1371520 AT1G21070.1 79.883 343 69 0 2 344 5 347 0.0 559
Msa1371520 AT1G76670.2 79.883 343 68 1 2 344 5 346 0.0 549
Msa1371520 AT1G76670.1 79.883 343 68 1 2 344 5 346 0.0 549
Msa1371520 AT5G42420.1 77.746 346 74 2 2 344 4 349 0.0 541
Msa1371520 AT4G09810.1 51.713 321 142 5 2 316 6 319 1.38e-107 318
Msa1371520 AT1G34020.2 51.792 307 137 4 16 316 18 319 7.12e-103 306
Msa1371520 AT1G34020.1 51.792 307 137 4 16 316 18 319 7.12e-103 306
Msa1371520 AT1G34020.3 51.792 307 137 4 16 316 18 319 7.12e-103 306
Msa1371520 AT4G39390.1 48.137 322 162 3 3 321 10 329 2.92e-99 297
Msa1371520 AT4G39390.2 48.137 322 162 3 3 321 10 329 2.92e-99 297
Msa1371520 AT4G39390.3 48.137 322 162 3 3 321 6 325 3.16e-99 296
Msa1371520 AT5G42420.2 73.988 173 43 1 174 344 110 282 2.37e-88 267
Msa1371520 AT5G42420.2 79.245 106 21 1 2 106 4 109 2.76e-53 177
Msa1371520 AT4G09810.2 51.331 263 119 3 60 316 3 262 3.43e-87 264
Msa1371520 AT4G09810.3 53.982 226 100 2 2 227 6 227 3.31e-76 234
Msa1371520 AT2G28315.1 36.873 339 198 3 4 342 3 325 3.43e-67 215
Msa1371520 AT2G30460.1 39.157 332 176 3 3 322 2 319 4.30e-67 215
Msa1371520 AT2G30460.2 39.157 332 176 3 3 322 2 319 4.30e-67 215
Msa1371520 AT2G28315.2 39.661 295 176 1 4 298 3 295 5.67e-67 213
Msa1371520 AT1G06890.4 38.177 351 182 5 3 341 2 329 8.02e-66 212
Msa1371520 AT1G06890.3 38.177 351 182 5 3 341 2 329 9.19e-66 211
Msa1371520 AT1G06890.2 38.177 351 182 5 3 341 2 329 1.54e-65 211
Msa1371520 AT1G06890.1 38.177 351 182 5 3 341 2 329 1.54e-65 211
Msa1371520 AT2G30460.3 38.832 291 154 2 44 322 20 298 3.61e-63 204
Msa1371520 AT2G30460.6 38.832 291 154 2 44 322 20 298 3.61e-63 204
Msa1371520 AT2G30460.5 38.832 291 154 2 44 322 20 298 3.61e-63 204
Msa1371520 AT2G30460.4 38.667 225 136 1 3 227 2 224 4.43e-37 136
Msa1371520 AT5G55950.4 31.447 318 202 7 19 331 4 310 1.42e-32 124
Msa1371520 AT5G55950.1 31.447 318 202 7 19 331 64 370 2.99e-32 124
Msa1371520 AT5G57100.1 32.292 288 177 7 19 298 71 348 5.29e-29 115
Msa1371520 AT5G55950.3 30.068 296 193 6 41 331 6 292 1.42e-27 110
Msa1371520 AT5G57100.4 33.166 199 127 4 101 298 40 233 1.64e-21 93.2
Msa1371520 AT5G57100.2 31.224 237 147 5 19 248 71 298 1.95e-21 93.2
Msa1371520 AT5G55950.2 31.197 234 151 4 19 248 64 291 2.98e-21 92.8
Msa1371520 AT1G77610.1 24.138 319 215 8 16 320 17 322 1.24e-14 74.3
Msa1371520 AT5G57100.3 32.386 176 101 5 15 180 67 234 4.11e-14 72.0
Msa1371520 AT1G21870.1 24.269 342 227 13 7 332 14 339 2.30e-13 70.5
Msa1371520 AT1G12500.1 26.246 301 201 9 22 309 69 361 4.38e-12 67.0
Msa1371520 AT3G11320.1 23.793 290 212 3 22 304 21 308 1.49e-11 65.1
Msa1371520 AT5G05820.1 23.368 291 214 3 22 305 21 309 4.28e-11 63.5
Msa1371520 AT4G32272.1 24.771 218 143 6 88 298 135 338 5.08e-11 63.5
Msa1371520 AT4G32272.2 24.771 218 143 6 88 298 150 353 6.00e-11 63.5

Find 128 sgRNAs with CRISPR-Local

Find 219 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTTTGTGGGAGCTTATT+TGG 0.141842 tig0019233:+96953 Msa1371520:CDS
GCTCTCTCTCTTATTATTCT+TGG 0.167279 tig0019233:+98459 Msa1371520:CDS
CTTCTCAGCAGTTTCCTTCC+AGG 0.234608 tig0019233:+98733 Msa1371520:CDS
AGAACGAGAGAATAAATAAA+AGG 0.283153 tig0019233:-96403 None:intergenic
TCGGTCATGGTTGTGGTTAT+TGG 0.305025 tig0019233:+97603 Msa1371520:CDS
ATTGTATTCAATTGCGATTA+CGG 0.315031 tig0019233:+96517 Msa1371520:five_prime_UTR
AATGGTTATGCTTTCACTTT+CGG 0.319160 tig0019233:+96724 Msa1371520:CDS
AAAATTAAAATTGTTGGATA+AGG 0.330145 tig0019233:+99053 Msa1371520:three_prime_UTR
ACATTATGTGTTCTGACTTT+GGG 0.331186 tig0019233:+98773 Msa1371520:CDS
ACCAACTTTAAGATGTCTTC+TGG 0.333926 tig0019233:+98519 Msa1371520:CDS
TGATGAGTTTGTTATTTGTT+TGG 0.345437 tig0019233:+99244 Msa1371520:three_prime_UTR
CATCCCGGTGATAGATATAT+TGG 0.352609 tig0019233:-96989 None:intergenic
AACGCAACTTGAATCAATTA+TGG 0.358686 tig0019233:+96597 Msa1371520:exon
TTGGCTTGTCCGTGATTAAT+TGG 0.359542 tig0019233:+99263 Msa1371520:three_prime_UTR
TTCTAAGCATGTTCCTTTGT+GGG 0.362172 tig0019233:+96942 Msa1371520:CDS
CTTCTAAGCATGTTCCTTTG+TGG 0.365168 tig0019233:+96941 Msa1371520:CDS
CTTTCGATCGGAAAGGGAAA+AGG 0.366317 tig0019233:-96458 None:intergenic
GCCTAACAGAAGAAGAAATT+AGG 0.371713 tig0019233:+98936 Msa1371520:CDS
CCATCGCATCGCTGGCTGGC+TGG 0.376723 tig0019233:-96185 None:intergenic
GCCTAATTTCTTCTTCTGTT+AGG 0.377365 tig0019233:-98937 None:intergenic
CGGCATGGTAATTTATAGTT+GGG 0.383718 tig0019233:+98859 Msa1371520:CDS
CGATTTCTTTCGATCGGAAA+GGG 0.392587 tig0019233:-96464 None:intergenic
CTGGCTGGCAGTGGCACACA+AGG 0.396310 tig0019233:-96170 None:intergenic
ATCAAAACTAAGCATGATTC+CGG 0.401274 tig0019233:+97521 Msa1371520:CDS
TGAGGGAGAGTCTTCGCATT+TGG 0.407601 tig0019233:-98902 None:intergenic
AACATTATGTGTTCTGACTT+TGG 0.411202 tig0019233:+98772 Msa1371520:CDS
GAAAGATATTGAACTTGGTC+AGG 0.413799 tig0019233:+98991 Msa1371520:CDS
TTACCAGCGACTACTTTGAC+TGG 0.414974 tig0019233:+96859 Msa1371520:intron
TCGGCATGGTAATTTATAGT+TGG 0.416121 tig0019233:+98858 Msa1371520:CDS
ATGGTTGTGGTTATTGGTGT+TGG 0.416143 tig0019233:+97609 Msa1371520:CDS
ACCACCATCGCATCGCTGGC+TGG 0.417955 tig0019233:-96189 None:intergenic
TTGGATAAGGATTAGTATCA+AGG 0.418904 tig0019233:+99066 Msa1371520:three_prime_UTR
CCGTTGAAAGATATTGAACT+TGG 0.422605 tig0019233:+98986 Msa1371520:CDS
ATTGGTAGATGAACAATATG+AGG 0.437032 tig0019233:+99281 Msa1371520:three_prime_UTR
AGTGAAAGCATAACCATTGT+TGG 0.439900 tig0019233:-96719 None:intergenic
ATCGCAATTGAATACAATTA+CGG 0.440354 tig0019233:-96512 None:intergenic
CACAGCAAGTAAACTAGAAA+AGG 0.447672 tig0019233:-99119 None:intergenic
GGAAAGAAAGTAAGTGAGGA+GGG 0.449523 tig0019233:-96382 None:intergenic
TTTGCTGTAACTGCTCTTGT+CGG 0.454803 tig0019233:+96889 Msa1371520:CDS
GATTAGTATCAAGGTTATTG+TGG 0.456157 tig0019233:+99075 Msa1371520:three_prime_UTR
TTGAGTAGTGTTTGCTGTGA+AGG 0.456859 tig0019233:-97566 None:intergenic
ATGCTTAGAAGCAGAATAAC+CGG 0.461497 tig0019233:-96929 None:intergenic
ATAAGAGAGAGAGCTTGAAT+AGG 0.463485 tig0019233:-98450 None:intergenic
AGCGCCCAATGCAGAGGTAC+TGG 0.464687 tig0019233:-98712 None:intergenic
GATGTAAATGTTAACTTCAA+AGG 0.465558 tig0019233:+97648 Msa1371520:CDS
CATCGCTGGCTGGCTGGCAG+TGG 0.468862 tig0019233:-96179 None:intergenic
GAGTTCCGTTGGAATTATCA+TGG 0.475175 tig0019233:+96678 Msa1371520:CDS
GGAATGGTTCTTGCAGTTGT+CGG 0.475720 tig0019233:+98839 Msa1371520:CDS
CCATTGTTGTGATAGTCAAT+CGG 0.479781 tig0019233:+98372 Msa1371520:intron
GCCAGCCAGCGATGCGATGG+TGG 0.483163 tig0019233:+96188 Msa1371520:five_prime_UTR
GAAATTAGGCTATTGAAGGA+AGG 0.484963 tig0019233:+98950 Msa1371520:CDS
AGCCTCATGCTCAATTCCGT+TGG 0.485954 tig0019233:+97018 Msa1371520:CDS
CTGAGATAGTAATCAACAAA+TGG 0.487131 tig0019233:-98483 None:intergenic
TTTCGATCGGAAAGGGAAAA+GGG 0.490069 tig0019233:-96457 None:intergenic
AGAAGAAATTAGGCTATTGA+AGG 0.492635 tig0019233:+98946 Msa1371520:CDS
AAAGAAATCGACCTCAGATC+TGG 0.492639 tig0019233:+96477 Msa1371520:five_prime_UTR
TAAGCCAGTACCTCTGCATT+GGG 0.493548 tig0019233:+98708 Msa1371520:CDS
CGGTGGTTTGTGTGATGGAA+TGG 0.496976 tig0019233:+97541 Msa1371520:CDS
TCACACCACCATCGCATCGC+TGG 0.497315 tig0019233:-96193 None:intergenic
ACCAGAAGACATCTTAAAGT+TGG 0.497523 tig0019233:-98520 None:intergenic
CCAGCCAGCCAGCGATGCGA+TGG 0.497702 tig0019233:+96185 Msa1371520:five_prime_UTR
ATGTAAAATGTGTAAGCTGA+TGG 0.509910 tig0019233:+99318 Msa1371520:three_prime_UTR
AAAAGGAAAGAAAGTAAGTG+AGG 0.515205 tig0019233:-96386 None:intergenic
CACATTGAATTGATTTAGAG+AGG 0.518364 tig0019233:+96263 Msa1371520:five_prime_UTR
ATGAACGTTGTGAGTTCCGT+TGG 0.518477 tig0019233:+96667 Msa1371520:CDS
GTAAGCCAGTACCTCTGCAT+TGG 0.520697 tig0019233:+98707 Msa1371520:CDS
CTACAAAAGAAATATTCGAT+TGG 0.521950 tig0019233:+98399 Msa1371520:CDS
AATATCGAACTTTGGAGCAT+GGG 0.527661 tig0019233:+96642 Msa1371520:CDS
GATTCCGGTGGTTTGTGTGA+TGG 0.533242 tig0019233:+97536 Msa1371520:CDS
GGCTGGCAGTGGCACACAAG+GGG 0.534421 tig0019233:-96168 None:intergenic
CCGATTTAAAACTGAACTGA+TGG 0.536082 tig0019233:-96341 None:intergenic
TGATGATACAACTGCTACAC+AGG 0.539546 tig0019233:-97682 None:intergenic
TTCACAGCAAACACTACTCA+AGG 0.539879 tig0019233:+97568 Msa1371520:CDS
ACAATATGAGGGCACTATTG+TGG 0.542316 tig0019233:+99293 Msa1371520:three_prime_UTR
TGAGGTCGATTTCTTTCGAT+CGG 0.544007 tig0019233:-96470 None:intergenic
TTTACTTGCTGTGAAACTCT+CGG 0.545380 tig0019233:+99129 Msa1371520:three_prime_UTR
CAATATCGAACTTTGGAGCA+TGG 0.548091 tig0019233:+96641 Msa1371520:CDS
GACCTCAGATCTGGTGGTGG+TGG 0.548495 tig0019233:+96486 Msa1371520:five_prime_UTR
TTTCAAGAACATCATGGGAA+TGG 0.549087 tig0019233:+98823 Msa1371520:CDS
GTTGCCAATATATCTATCAC+CGG 0.550759 tig0019233:+96985 Msa1371520:CDS
TCGTCAGCAATATCGAACTT+TGG 0.553664 tig0019233:+96634 Msa1371520:CDS
TACCAGCGACTACTTTGACT+GGG 0.553992 tig0019233:+96860 Msa1371520:intron
AATTAGGCTATTGAAGGAAG+GGG 0.554252 tig0019233:+98952 Msa1371520:CDS
GGTTCTTGCAGTTGTCGGCA+TGG 0.555441 tig0019233:+98844 Msa1371520:CDS
GGTAATTTATAGTTGGGCTG+TGG 0.556380 tig0019233:+98865 Msa1371520:CDS
TCGATTTCTTTCGATCGGAA+AGG 0.556479 tig0019233:-96465 None:intergenic
GAAAGTGTCGGTCATGGTTG+TGG 0.566114 tig0019233:+97596 Msa1371520:CDS
CCAAGTTCAATATCTTTCAA+CGG 0.566323 tig0019233:-98986 None:intergenic
GCTCACTTTCAAGAACATCA+TGG 0.566672 tig0019233:+98817 Msa1371520:CDS
CTCACTTTCAAGAACATCAT+GGG 0.569962 tig0019233:+98818 Msa1371520:CDS
AGGAAAGAAAGTAAGTGAGG+AGG 0.570153 tig0019233:-96383 None:intergenic
AAATTAGGCTATTGAAGGAA+GGG 0.573519 tig0019233:+98951 Msa1371520:CDS
TACATTACAAAACACAGCTA+AGG 0.580553 tig0019233:-98687 None:intergenic
AAGAAAGTAAGTGAGGAGGG+AGG 0.582082 tig0019233:-96379 None:intergenic
CGACGACATAAGTGATTGTG+AGG 0.588624 tig0019233:+96299 Msa1371520:five_prime_UTR
ATCTATTAACAAACAAACAA+AGG 0.588663 tig0019233:-96543 None:intergenic
GGAAGTGAAAGTGTCGGTCA+TGG 0.589747 tig0019233:+97590 Msa1371520:CDS
TGGCTGGCAGTGGCACACAA+GGG 0.592003 tig0019233:-96169 None:intergenic
ATTAGCCATGATAATTCCAA+CGG 0.593168 tig0019233:-96683 None:intergenic
TATGTGTTCTGACTTTGGGG+TGG 0.604352 tig0019233:+98777 Msa1371520:CDS
GACATAAGTGATTGTGAGGG+AGG 0.604621 tig0019233:+96303 Msa1371520:five_prime_UTR
CTGAGAAGCGCCCAATGCAG+AGG 0.605531 tig0019233:-98718 None:intergenic
ATTGAATTGATTTAGAGAGG+TGG 0.608450 tig0019233:+96266 Msa1371520:five_prime_UTR
CATTATGTGTTCTGACTTTG+GGG 0.611362 tig0019233:+98774 Msa1371520:CDS
GTTCATCTACCAATTAATCA+CGG 0.612869 tig0019233:-99272 None:intergenic
CATGTGGCCTAAAACCTGGA+AGG 0.613117 tig0019233:-98747 None:intergenic
GATTCTCACTCACACACAGA+TGG 0.613336 tig0019233:+99028 Msa1371520:three_prime_UTR
ATCGACCTCAGATCTGGTGG+TGG 0.615281 tig0019233:+96483 Msa1371520:five_prime_UTR
GAAAAGGAAATAATAAGAGT+CGG 0.627318 tig0019233:-96098 None:intergenic
GGACTCGTCTCAAATGCTAC+CGG 0.630645 tig0019233:+96910 Msa1371520:CDS
CATGAGGCTTAAGTTCATCC+CGG 0.630737 tig0019233:-97004 None:intergenic
CATTCCATCACACAAACCAC+CGG 0.631892 tig0019233:-97540 None:intergenic
TTGGTAGATGAACAATATGA+GGG 0.632448 tig0019233:+99282 Msa1371520:three_prime_UTR
AAAACTAAGCATGATTCCGG+TGG 0.633913 tig0019233:+97524 Msa1371520:CDS
TTTGTTGATTACTATCTCAG+TGG 0.635140 tig0019233:+98486 Msa1371520:CDS
GAAATCGACCTCAGATCTGG+TGG 0.637418 tig0019233:+96480 Msa1371520:five_prime_UTR
TACCACCACCACCAGATCTG+AGG 0.640382 tig0019233:-96488 None:intergenic
AAACAGCTTATGTCCAACAA+TGG 0.647240 tig0019233:+96706 Msa1371520:CDS
GCGTTGCGTTGCGTTGCGTG+TGG 0.653060 tig0019233:-96574 None:intergenic
TTGCCAATATATCTATCACC+GGG 0.654090 tig0019233:+96986 Msa1371520:CDS
GCATACTTGGTAGAATCCAA+CGG 0.658976 tig0019233:-97034 None:intergenic
TCACAGCAAACACTACTCAA+GGG 0.660525 tig0019233:+97569 Msa1371520:CDS
ATCCAACGGAATTGAGCATG+AGG 0.660676 tig0019233:-97020 None:intergenic
ATATCGAACTTTGGAGCATG+GGG 0.667111 tig0019233:+96643 Msa1371520:CDS
CTCAAGGGAAGTGAAAGTGT+CGG 0.679931 tig0019233:+97584 Msa1371520:CDS
GACGACATAAGTGATTGTGA+GGG 0.689489 tig0019233:+96300 Msa1371520:five_prime_UTR
AACCAAATAAGCTCCCACAA+AGG 0.703411 tig0019233:-96955 None:intergenic
ATGGTGGTGTGAGACAACAT+TGG 0.722291 tig0019233:+96204 Msa1371520:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTCTTTTATTTTACTG+AGG - tig0019233:96235-96254 None:intergenic 15.0%
!!! GAAAATGAAAATTTTAAAAC+TGG - tig0019233:97480-97499 None:intergenic 15.0%
!! ATAATAGAAAAAGAAACATT+TGG + tig0019233:97832-97851 Msa1371520:intron 15.0%
!!! AATAAATCTATTGATTTGTT+GGG - tig0019233:97865-97884 None:intergenic 15.0%
!!! TAATAAATCTATTGATTTGT+TGG - tig0019233:97866-97885 None:intergenic 15.0%
!!! AAAAAAAGAAGTTTGATTTA+AGG - tig0019233:98273-98292 None:intergenic 15.0%
!! AAAATTAAAATTGTTGGATA+AGG + tig0019233:99053-99072 Msa1371520:three_prime_UTR 15.0%
!!! TAAAGAAACATTTTCTAAAA+TGG - tig0019233:99182-99201 None:intergenic 15.0%
!! ATCTATTAACAAACAAACAA+AGG - tig0019233:96546-96565 None:intergenic 20.0%
!! ATGAAATGTGAAAAATGAAT+GGG - tig0019233:96793-96812 None:intergenic 20.0%
!! AATGAAATGTGAAAAATGAA+TGG - tig0019233:96794-96813 None:intergenic 20.0%
!!! AATGAAAATTTTAAAACTGG+AGG - tig0019233:97477-97496 None:intergenic 20.0%
!! AAAGGACATCTTAATATAAA+TGG - tig0019233:97778-97797 None:intergenic 20.0%
!! AATATAAATAACAGGAGAAA+AGG - tig0019233:97796-97815 None:intergenic 20.0%
!! AACACTTGAATATAAATAAC+AGG - tig0019233:97804-97823 None:intergenic 20.0%
!! AAAAAGAAACATTTGGTTAT+GGG + tig0019233:97839-97858 Msa1371520:intron 20.0%
!!! CATCATTTTTATTCTTTTGA+AGG + tig0019233:97986-98005 Msa1371520:intron 20.0%
!! ACTATATATGCATATATTGT+TGG + tig0019233:98608-98627 Msa1371520:intron 20.0%
!! ATGGCAAAAATTAAAATTGT+TGG + tig0019233:99047-99066 Msa1371520:three_prime_UTR 20.0%
! GAAAAGGAAATAATAAGAGT+CGG - tig0019233:96101-96120 None:intergenic 25.0%
!! GACTCTTATTATTTCCTTTT+CGG + tig0019233:96100-96119 Msa1371520:five_prime_UTR 25.0%
!!! ATTCTTTTATTTTACTGAGG+AGG - tig0019233:96232-96251 None:intergenic 25.0%
! AGAACGAGAGAATAAATAAA+AGG - tig0019233:96406-96425 None:intergenic 25.0%
! ATCGCAATTGAATACAATTA+CGG - tig0019233:96515-96534 None:intergenic 25.0%
! ATTGTATTCAATTGCGATTA+CGG + tig0019233:96517-96536 Msa1371520:five_prime_UTR 25.0%
! AGATTTAGAGATTAATGAGT+TGG + tig0019233:97217-97236 Msa1371520:intron 25.0%
! TGGTCTATGATAGAATATTA+TGG + tig0019233:97252-97271 Msa1371520:intron 25.0%
! GATGTAAATGTTAACTTCAA+AGG + tig0019233:97648-97667 Msa1371520:CDS 25.0%
! GAAAAAGAAACATTTGGTTA+TGG + tig0019233:97838-97857 Msa1371520:intron 25.0%
! ATGATTCTAAACCAGTAAAT+TGG + tig0019233:98086-98105 Msa1371520:intron 25.0%
!! TTCAGCATCTTTTATTATCT+TGG + tig0019233:98183-98202 Msa1371520:intron 25.0%
! AATTTAGAAATCAAACTGGT+TGG - tig0019233:98238-98257 None:intergenic 25.0%
! TGGTAATTTAGAAATCAAAC+TGG - tig0019233:98242-98261 None:intergenic 25.0%
!! TTTGATTTAAGGAAGAAACT+TGG - tig0019233:98262-98281 None:intergenic 25.0%
! AAAAAAATCAGGTATAGCAA+GGG - tig0019233:98350-98369 None:intergenic 25.0%
! AAAAAAAATCAGGTATAGCA+AGG - tig0019233:98351-98370 None:intergenic 25.0%
! CTACAAAAGAAATATTCGAT+TGG + tig0019233:98399-98418 Msa1371520:CDS 25.0%
! TCTAGATTCAACACAAAAAA+AGG - tig0019233:98563-98582 None:intergenic 25.0%
!!! TGATGAGTTTGTTATTTGTT+TGG + tig0019233:99244-99263 Msa1371520:three_prime_UTR 25.0%
! CACATTGAATTGATTTAGAG+AGG + tig0019233:96263-96282 Msa1371520:five_prime_UTR 30.0%
! ATTGAATTGATTTAGAGAGG+TGG + tig0019233:96266-96285 Msa1371520:five_prime_UTR 30.0%
!!! CCATCAGTTCAGTTTTAAAT+CGG + tig0019233:96341-96360 Msa1371520:five_prime_UTR 30.0%
AAAAGGAAAGAAAGTAAGTG+AGG - tig0019233:96389-96408 None:intergenic 30.0%
AACGCAACTTGAATCAATTA+TGG + tig0019233:96597-96616 Msa1371520:exon 30.0%
ATTAGCCATGATAATTCCAA+CGG - tig0019233:96686-96705 None:intergenic 30.0%
AATGGTTATGCTTTCACTTT+CGG + tig0019233:96724-96743 Msa1371520:CDS 30.0%
TCATTACTACAGAATCTACA+GGG - tig0019233:97118-97137 None:intergenic 30.0%
TATCATAGACCACCATATTT+CGG - tig0019233:97244-97263 None:intergenic 30.0%
ATCAAAACTAAGCATGATTC+CGG + tig0019233:97521-97540 Msa1371520:CDS 30.0%
TCTTTACAGCAAATTGTAAG+TGG + tig0019233:97705-97724 Msa1371520:intron 30.0%
! GATCTAAAATGAACATTGAC+TGG - tig0019233:98031-98050 None:intergenic 30.0%
AAACAGACTTCATTGTTAAC+AGG + tig0019233:98051-98070 Msa1371520:intron 30.0%
AACAGACTTCATTGTTAACA+GGG + tig0019233:98052-98071 Msa1371520:intron 30.0%
CAATTACTTGACCAATTTAC+TGG - tig0019233:98100-98119 None:intergenic 30.0%
CAGTAAATTGGTCAAGTAAT+TGG + tig0019233:98098-98117 Msa1371520:intron 30.0%
AAACTTCCTGTGTTATATAC+CGG + tig0019233:98299-98318 Msa1371520:intron 30.0%
CAACAATGGGAAAAAAAATC+AGG - tig0019233:98361-98380 None:intergenic 30.0%
CTGAGATAGTAATCAACAAA+TGG - tig0019233:98486-98505 None:intergenic 30.0%
! TTTGTTGATTACTATCTCAG+TGG + tig0019233:98486-98505 Msa1371520:CDS 30.0%
AAAAAGGTGATCACTTACAA+TGG - tig0019233:98547-98566 None:intergenic 30.0%
! AGTGTCTTTTAAATTTCTGC+AGG + tig0019233:98643-98662 Msa1371520:intron 30.0%
TACATTACAAAACACAGCTA+AGG - tig0019233:98690-98709 None:intergenic 30.0%
! GAACACATAATGTTTTCATG+TGG - tig0019233:98766-98785 None:intergenic 30.0%
AACATTATGTGTTCTGACTT+TGG + tig0019233:98772-98791 Msa1371520:CDS 30.0%
ACATTATGTGTTCTGACTTT+GGG + tig0019233:98773-98792 Msa1371520:CDS 30.0%
AGAAGAAATTAGGCTATTGA+AGG + tig0019233:98946-98965 Msa1371520:CDS 30.0%
AAATTAGGCTATTGAAGGAA+GGG + tig0019233:98951-98970 Msa1371520:CDS 30.0%
CCAAGTTCAATATCTTTCAA+CGG - tig0019233:98989-99008 None:intergenic 30.0%
! TTGGATAAGGATTAGTATCA+AGG + tig0019233:99066-99085 Msa1371520:three_prime_UTR 30.0%
GATTAGTATCAAGGTTATTG+TGG + tig0019233:99075-99094 Msa1371520:three_prime_UTR 30.0%
GTTCATCTACCAATTAATCA+CGG - tig0019233:99275-99294 None:intergenic 30.0%
ATTGGTAGATGAACAATATG+AGG + tig0019233:99281-99300 Msa1371520:three_prime_UTR 30.0%
TTGGTAGATGAACAATATGA+GGG + tig0019233:99282-99301 Msa1371520:three_prime_UTR 30.0%
ATGTAAAATGTGTAAGCTGA+TGG + tig0019233:99318-99337 Msa1371520:three_prime_UTR 30.0%
!! TTTTTGTTTCGTCACCGAAA+AGG - tig0019233:96117-96136 None:intergenic 35.0%
! TTTTCGGTGACGAAACAAAA+AGG + tig0019233:96116-96135 Msa1371520:five_prime_UTR 35.0%
TGACGAAACAAAAAGGAGTT+TGG + tig0019233:96123-96142 Msa1371520:five_prime_UTR 35.0%
! CCGATTTAAAACTGAACTGA+TGG - tig0019233:96344-96363 None:intergenic 35.0%
!! AATATCGAACTTTGGAGCAT+GGG + tig0019233:96642-96661 Msa1371520:CDS 35.0%
AAACAGCTTATGTCCAACAA+TGG + tig0019233:96706-96725 Msa1371520:CDS 35.0%
! AGTGAAAGCATAACCATTGT+TGG - tig0019233:96722-96741 None:intergenic 35.0%
GTGAAAAATGAATGGGATCT+GGG - tig0019233:96786-96805 None:intergenic 35.0%
TGTGAAAAATGAATGGGATC+TGG - tig0019233:96787-96806 None:intergenic 35.0%
ATGCTTAGAAGCAGAATAAC+CGG - tig0019233:96932-96951 None:intergenic 35.0%
TTCTAAGCATGTTCCTTTGT+GGG + tig0019233:96942-96961 Msa1371520:CDS 35.0%
GTTGCCAATATATCTATCAC+CGG + tig0019233:96985-97004 Msa1371520:CDS 35.0%
TTGCCAATATATCTATCACC+GGG + tig0019233:96986-97005 Msa1371520:CDS 35.0%
AGATGAAAAGCAAGCATACT+TGG - tig0019233:97050-97069 None:intergenic 35.0%
GTCATTACTACAGAATCTAC+AGG - tig0019233:97119-97138 None:intergenic 35.0%
GTTTCTCTTATAGATTTCCC+AGG - tig0019233:97188-97207 None:intergenic 35.0%
! TAATGAGTTGGACCGAAATA+TGG + tig0019233:97229-97248 Msa1371520:intron 35.0%
TAAATTCCATATTGCCCACA+TGG - tig0019233:97752-97771 None:intergenic 35.0%
TTACAGACACATCTTTCATC+TGG + tig0019233:97883-97902 Msa1371520:intron 35.0%
TACAGACACATCTTTCATCT+GGG + tig0019233:97884-97903 Msa1371520:intron 35.0%
TTGAATTGAAGATGAGTGCT+AGG + tig0019233:97930-97949 Msa1371520:intron 35.0%
ACAGACTTCATTGTTAACAG+GGG + tig0019233:98053-98072 Msa1371520:intron 35.0%
TGATTTCCGGTATATAACAC+AGG - tig0019233:98308-98327 None:intergenic 35.0%
CCAACAAATAGCATGATTTC+CGG - tig0019233:98321-98340 None:intergenic 35.0%
CGATTGACTATCACAACAAT+GGG - tig0019233:98374-98393 None:intergenic 35.0%
CCATTGTTGTGATAGTCAAT+CGG + tig0019233:98372-98391 Msa1371520:intron 35.0%
ATAAGAGAGAGAGCTTGAAT+AGG - tig0019233:98453-98472 None:intergenic 35.0%
GCTCTCTCTCTTATTATTCT+TGG + tig0019233:98459-98478 Msa1371520:CDS 35.0%
!! ACCAACTTTAAGATGTCTTC+TGG + tig0019233:98519-98538 Msa1371520:CDS 35.0%
ACCAGAAGACATCTTAAAGT+TGG - tig0019233:98523-98542 None:intergenic 35.0%
CATTATGTGTTCTGACTTTG+GGG + tig0019233:98774-98793 Msa1371520:CDS 35.0%
CTCACTTTCAAGAACATCAT+GGG + tig0019233:98818-98837 Msa1371520:CDS 35.0%
TTTCAAGAACATCATGGGAA+TGG + tig0019233:98823-98842 Msa1371520:CDS 35.0%
TCGGCATGGTAATTTATAGT+TGG + tig0019233:98858-98877 Msa1371520:CDS 35.0%
CGGCATGGTAATTTATAGTT+GGG + tig0019233:98859-98878 Msa1371520:CDS 35.0%
!!! TTAGGCTGTTTTTCGAATGA+GGG - tig0019233:98922-98941 None:intergenic 35.0%
GCCTAACAGAAGAAGAAATT+AGG + tig0019233:98936-98955 Msa1371520:CDS 35.0%
GCCTAATTTCTTCTTCTGTT+AGG - tig0019233:98940-98959 None:intergenic 35.0%
GAAATTAGGCTATTGAAGGA+AGG + tig0019233:98950-98969 Msa1371520:CDS 35.0%
AATTAGGCTATTGAAGGAAG+GGG + tig0019233:98952-98971 Msa1371520:CDS 35.0%
CCGTTGAAAGATATTGAACT+TGG + tig0019233:98986-99005 Msa1371520:CDS 35.0%
GAAAGATATTGAACTTGGTC+AGG + tig0019233:98991-99010 Msa1371520:CDS 35.0%
CACAGCAAGTAAACTAGAAA+AGG - tig0019233:99122-99141 None:intergenic 35.0%
!! TTTACTTGCTGTGAAACTCT+CGG + tig0019233:99129-99148 Msa1371520:three_prime_UTR 35.0%
CGAAACAAAAAGGAGTTTGG+AGG + tig0019233:96126-96145 Msa1371520:five_prime_UTR 40.0%
GACGACATAAGTGATTGTGA+GGG + tig0019233:96300-96319 Msa1371520:five_prime_UTR 40.0%
GGAAAGAAAGTAAGTGAGGA+GGG - tig0019233:96385-96404 None:intergenic 40.0%
AGGAAAGAAAGTAAGTGAGG+AGG - tig0019233:96386-96405 None:intergenic 40.0%
TTTCGATCGGAAAGGGAAAA+GGG - tig0019233:96460-96479 None:intergenic 40.0%
CGATTTCTTTCGATCGGAAA+GGG - tig0019233:96467-96486 None:intergenic 40.0%
TCGATTTCTTTCGATCGGAA+AGG - tig0019233:96468-96487 None:intergenic 40.0%
! TGAGGTCGATTTCTTTCGAT+CGG - tig0019233:96473-96492 None:intergenic 40.0%
AAAGAAATCGACCTCAGATC+TGG + tig0019233:96477-96496 Msa1371520:five_prime_UTR 40.0%
TCGTCAGCAATATCGAACTT+TGG + tig0019233:96634-96653 Msa1371520:CDS 40.0%
!! CAATATCGAACTTTGGAGCA+TGG + tig0019233:96641-96660 Msa1371520:CDS 40.0%
!! ATATCGAACTTTGGAGCATG+GGG + tig0019233:96643-96662 Msa1371520:CDS 40.0%
GAGTTCCGTTGGAATTATCA+TGG + tig0019233:96678-96697 Msa1371520:CDS 40.0%
GGTGCAGATCTAATGTAATG+AGG - tig0019233:96765-96784 None:intergenic 40.0%
! TTTGCTGTAACTGCTCTTGT+CGG + tig0019233:96889-96908 Msa1371520:CDS 40.0%
CTTCTAAGCATGTTCCTTTG+TGG + tig0019233:96941-96960 Msa1371520:CDS 40.0%
TTCCTTTGTGGGAGCTTATT+TGG + tig0019233:96953-96972 Msa1371520:CDS 40.0%
AACCAAATAAGCTCCCACAA+AGG - tig0019233:96958-96977 None:intergenic 40.0%
CATCCCGGTGATAGATATAT+TGG - tig0019233:96992-97011 None:intergenic 40.0%
GCATACTTGGTAGAATCCAA+CGG - tig0019233:97037-97056 None:intergenic 40.0%
TCAATCCTTAACCCACTAAC+CGG - tig0019233:97303-97322 None:intergenic 40.0%
!! CTTCCTTTTAGAGACATGTG+CGG + tig0019233:97370-97389 Msa1371520:intron 40.0%
GAAAGTGAAAACACGAGAGT+AGG - tig0019233:97443-97462 None:intergenic 40.0%
AAAACTAAGCATGATTCCGG+TGG + tig0019233:97524-97543 Msa1371520:CDS 40.0%
!! TTGAGTAGTGTTTGCTGTGA+AGG - tig0019233:97569-97588 None:intergenic 40.0%
TTCACAGCAAACACTACTCA+AGG + tig0019233:97568-97587 Msa1371520:CDS 40.0%
TCACAGCAAACACTACTCAA+GGG + tig0019233:97569-97588 Msa1371520:CDS 40.0%
ATGGTTGTGGTTATTGGTGT+TGG + tig0019233:97609-97628 Msa1371520:CDS 40.0%
TGATGATACAACTGCTACAC+AGG - tig0019233:97685-97704 None:intergenic 40.0%
! CCGGAAATCATGCTATTTGT+TGG + tig0019233:98318-98337 Msa1371520:intron 40.0%
CCGATTGACTATCACAACAA+TGG - tig0019233:98375-98394 None:intergenic 40.0%
! TTTTCATGTGGCCTAAAACC+TGG - tig0019233:98754-98773 None:intergenic 40.0%
GCTCACTTTCAAGAACATCA+TGG + tig0019233:98817-98836 Msa1371520:CDS 40.0%
GGTAATTTATAGTTGGGCTG+TGG + tig0019233:98865-98884 Msa1371520:CDS 40.0%
!!! GTTAGGCTGTTTTTCGAATG+AGG - tig0019233:98923-98942 None:intergenic 40.0%
!! TTGGCTTGTCCGTGATTAAT+TGG + tig0019233:99263-99282 Msa1371520:three_prime_UTR 40.0%
!! ACAATATGAGGGCACTATTG+TGG + tig0019233:99293-99312 Msa1371520:three_prime_UTR 40.0%
! ATGGTGGTGTGAGACAACAT+TGG + tig0019233:96204-96223 Msa1371520:five_prime_UTR 45.0%
CGACGACATAAGTGATTGTG+AGG + tig0019233:96299-96318 Msa1371520:five_prime_UTR 45.0%
GACATAAGTGATTGTGAGGG+AGG + tig0019233:96303-96322 Msa1371520:five_prime_UTR 45.0%
AAGAAAGTAAGTGAGGAGGG+AGG - tig0019233:96382-96401 None:intergenic 45.0%
CTTTCGATCGGAAAGGGAAA+AGG - tig0019233:96461-96480 None:intergenic 45.0%
ATGAACGTTGTGAGTTCCGT+TGG + tig0019233:96667-96686 Msa1371520:CDS 45.0%
TTACCAGCGACTACTTTGAC+TGG + tig0019233:96859-96878 Msa1371520:intron 45.0%
TACCAGCGACTACTTTGACT+GGG + tig0019233:96860-96879 Msa1371520:intron 45.0%
CATGAGGCTTAAGTTCATCC+CGG - tig0019233:97007-97026 None:intergenic 45.0%
ATCCAACGGAATTGAGCATG+AGG - tig0019233:97023-97042 None:intergenic 45.0%
! AGATTTCCCAGGTTTTCCAC+TGG - tig0019233:97177-97196 None:intergenic 45.0%
! TGAGTTGGACCGAAATATGG+TGG + tig0019233:97232-97251 Msa1371520:intron 45.0%
CTACCGCACATGTCTCTAAA+AGG - tig0019233:97376-97395 None:intergenic 45.0%
CATTCCATCACACAAACCAC+CGG - tig0019233:97543-97562 None:intergenic 45.0%
! CTCAAGGGAAGTGAAAGTGT+CGG + tig0019233:97584-97603 Msa1371520:CDS 45.0%
TCGGTCATGGTTGTGGTTAT+TGG + tig0019233:97603-97622 Msa1371520:CDS 45.0%
AATGTGTCTGTTCCACCATG+TGG + tig0019233:97734-97753 Msa1371520:intron 45.0%
ATGTGTCTGTTCCACCATGT+GGG + tig0019233:97735-97754 Msa1371520:intron 45.0%
ATTCCATATTGCCCACATGG+TGG - tig0019233:97749-97768 None:intergenic 45.0%
TGTTCATCAGCACTATTCGC+TGG - tig0019233:98131-98150 None:intergenic 45.0%
TAAGCCAGTACCTCTGCATT+GGG + tig0019233:98708-98727 Msa1371520:CDS 45.0%
! GCAGTTTCCTTCCAGGTTTT+AGG + tig0019233:98740-98759 Msa1371520:CDS 45.0%
! TATGTGTTCTGACTTTGGGG+TGG + tig0019233:98777-98796 Msa1371520:CDS 45.0%
GGAATGGTTCTTGCAGTTGT+CGG + tig0019233:98839-98858 Msa1371520:CDS 45.0%
GATTCTCACTCACACACAGA+TGG + tig0019233:99028-99047 Msa1371520:three_prime_UTR 45.0%
GAAATCGACCTCAGATCTGG+TGG + tig0019233:96480-96499 Msa1371520:five_prime_UTR 50.0%
AACCCAGTCAAAGTAGTCGC+TGG - tig0019233:96865-96884 None:intergenic 50.0%
GGACTCGTCTCAAATGCTAC+CGG + tig0019233:96910-96929 Msa1371520:CDS 50.0%
AGCCTCATGCTCAATTCCGT+TGG + tig0019233:97018-97037 Msa1371520:CDS 50.0%
AGTCAGATCACTACAGCCAG+TGG + tig0019233:97158-97177 Msa1371520:intron 50.0%
ACTACAGCCAGTGGAAAACC+TGG + tig0019233:97167-97186 Msa1371520:intron 50.0%
CTACAGCCAGTGGAAAACCT+GGG + tig0019233:97168-97187 Msa1371520:intron 50.0%
! TTGATCCATGTAGCCGACTC+CGG + tig0019233:97281-97300 Msa1371520:intron 50.0%
CTTAACCCACTAACCGGAGT+CGG - tig0019233:97297-97316 None:intergenic 50.0%
! GATTCCGGTGGTTTGTGTGA+TGG + tig0019233:97536-97555 Msa1371520:CDS 50.0%
! CGGTGGTTTGTGTGATGGAA+TGG + tig0019233:97541-97560 Msa1371520:CDS 50.0%
!! GGAAGTGAAAGTGTCGGTCA+TGG + tig0019233:97590-97609 Msa1371520:CDS 50.0%
!! GAAAGTGTCGGTCATGGTTG+TGG + tig0019233:97596-97615 Msa1371520:CDS 50.0%
GTTCCACCATGTGGGCAATA+TGG + tig0019233:97743-97762 Msa1371520:intron 50.0%
GTAAGCCAGTACCTCTGCAT+TGG + tig0019233:98707-98726 Msa1371520:CDS 50.0%
CTTCTCAGCAGTTTCCTTCC+AGG + tig0019233:98733-98752 Msa1371520:CDS 50.0%
CATGTGGCCTAAAACCTGGA+AGG - tig0019233:98750-98769 None:intergenic 50.0%
TGAGGGAGAGTCTTCGCATT+TGG - tig0019233:98905-98924 None:intergenic 50.0%
! GTGAGGAGGGAGGAGCTTTT+TGG - tig0019233:96372-96391 None:intergenic 55.0%
ATCGACCTCAGATCTGGTGG+TGG + tig0019233:96483-96502 Msa1371520:five_prime_UTR 55.0%
TACCACCACCACCAGATCTG+AGG - tig0019233:96491-96510 None:intergenic 55.0%
ACTAACCGGAGTCGGCTACA+TGG - tig0019233:97289-97308 None:intergenic 55.0%
! ATGTAGCCGACTCCGGTTAG+TGG + tig0019233:97288-97307 Msa1371520:intron 55.0%
! TGTAGCCGACTCCGGTTAGT+GGG + tig0019233:97289-97308 Msa1371520:intron 55.0%
!! CGACTCCGGTTAGTGGGTTA+AGG + tig0019233:97295-97314 Msa1371520:intron 55.0%
GGTTCTTGCAGTTGTCGGCA+TGG + tig0019233:98844-98863 Msa1371520:CDS 55.0%
TGGCTGGCAGTGGCACACAA+GGG - tig0019233:96172-96191 None:intergenic 60.0%
TCACACCACCATCGCATCGC+TGG - tig0019233:96196-96215 None:intergenic 60.0%
!! GACCTCAGATCTGGTGGTGG+TGG + tig0019233:96486-96505 Msa1371520:five_prime_UTR 60.0%
! AGCGCCCAATGCAGAGGTAC+TGG - tig0019233:98715-98734 None:intergenic 60.0%
!! CTGAGAAGCGCCCAATGCAG+AGG - tig0019233:98721-98740 None:intergenic 60.0%
GGCTGGCAGTGGCACACAAG+GGG - tig0019233:96171-96190 None:intergenic 65.0%
CTGGCTGGCAGTGGCACACA+AGG - tig0019233:96173-96192 None:intergenic 65.0%
ACCACCATCGCATCGCTGGC+TGG - tig0019233:96192-96211 None:intergenic 65.0%
GCGTTGCGTTGCGTTGCGTG+TGG - tig0019233:96577-96596 None:intergenic 65.0%
! CATCGCTGGCTGGCTGGCAG+TGG - tig0019233:96182-96201 None:intergenic 70.0%
! CCATCGCATCGCTGGCTGGC+TGG - tig0019233:96188-96207 None:intergenic 70.0%
CCAGCCAGCCAGCGATGCGA+TGG + tig0019233:96185-96204 Msa1371520:five_prime_UTR 70.0%
GCCAGCCAGCGATGCGATGG+TGG + tig0019233:96188-96207 Msa1371520:five_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
tig0019233 gene 96083 99377 96083 ID=Msa1371520;Name=Msa1371520
tig0019233 mRNA 96083 99377 96083 ID=Msa1371520-mRNA-1;Parent=Msa1371520;Name=Msa1371520-mRNA-1;_AED=0.06;_eAED=0.06;_QI=533|1|1|1|1|1|5|353|345
tig0019233 exon 96083 96745 96083 ID=Msa1371520-mRNA-1:exon:2296;Parent=Msa1371520-mRNA-1
tig0019233 exon 96866 97050 96866 ID=Msa1371520-mRNA-1:exon:2297;Parent=Msa1371520-mRNA-1
tig0019233 exon 97519 97719 97519 ID=Msa1371520-mRNA-1:exon:2298;Parent=Msa1371520-mRNA-1
tig0019233 exon 98387 98548 98387 ID=Msa1371520-mRNA-1:exon:2299;Parent=Msa1371520-mRNA-1
tig0019233 exon 98665 99377 98665 ID=Msa1371520-mRNA-1:exon:2300;Parent=Msa1371520-mRNA-1
tig0019233 five_prime_UTR 96083 96615 96083 ID=Msa1371520-mRNA-1:five_prime_utr;Parent=Msa1371520-mRNA-1
tig0019233 CDS 96616 96745 96616 ID=Msa1371520-mRNA-1:cds;Parent=Msa1371520-mRNA-1
tig0019233 CDS 96866 97050 96866 ID=Msa1371520-mRNA-1:cds;Parent=Msa1371520-mRNA-1
tig0019233 CDS 97519 97719 97519 ID=Msa1371520-mRNA-1:cds;Parent=Msa1371520-mRNA-1
tig0019233 CDS 98387 98548 98387 ID=Msa1371520-mRNA-1:cds;Parent=Msa1371520-mRNA-1
tig0019233 CDS 98665 99024 98665 ID=Msa1371520-mRNA-1:cds;Parent=Msa1371520-mRNA-1
tig0019233 three_prime_UTR 99025 99377 99025 ID=Msa1371520-mRNA-1:three_prime_utr;Parent=Msa1371520-mRNA-1
Gene Sequence

>Msa1371520

ATGGAGAGTGAAAAGAAATCGTCAGCAATATCGAACTTTGGAGCATGGGGTATGAACGTTGTGAGTTCCGTTGGAATTATCATGGCTAATAAACAGCTTATGTCCAACAATGGTTATGCTTTCACTTTCGCGACTACTTTGACTGGGTTTCACTTTGCTGTAACTGCTCTTGTCGGACTCGTCTCAAATGCTACCGGTTATTCTGCTTCTAAGCATGTTCCTTTGTGGGAGCTTATTTGGTTCTCTGCTGTTGCCAATATATCTATCACCGGGATGAACTTAAGCCTCATGCTCAATTCCGTTGGATTCTACCAAATATCAAAACTAAGCATGATTCCGGTGGTTTGTGTGATGGAATGGATCCTTCACAGCAAACACTACTCAAGGGAAGTGAAAGTGTCGGTCATGGTTGTGGTTATTGGTGTTGGTGTTTGCACTGTAACTGATGTAAATGTTAACTTCAAAGGTTTTGTGTGCGCCTGTGTAGCAGTTGTATCATCATCTTTACAGCAAATTTCAATCGGTTCTCTACAAAAGAAATATTCGATTGGATCTTTTGAACTGCTGAGTAAGACTGCTCCTATTCAAGCTCTCTCTCTTATTATTCTTGGTCCATTTGTTGATTACTATCTCAGTGGCAAGTTGATAACCAACTTTAAGATGTCTTCTGGTGCCATTGTTTTCATTCTTCTTTCATGCACCTTAGCTGTGTTTTGTAATGTAAGCCAGTACCTCTGCATTGGGCGCTTCTCAGCAGTTTCCTTCCAGGTTTTAGGCCACATGAAAACATTATGTGTTCTGACTTTGGGGTGGCTGTTATTCGATTCAGAGCTCACTTTCAAGAACATCATGGGAATGGTTCTTGCAGTTGTCGGCATGGTAATTTATAGTTGGGCTGTGGAGCTTGAAAAGCAGCCAAATGCGAAGACTCTCCCTCATTCGAAAAACAGCCTAACAGAAGAAGAAATTAGGCTATTGAAGGAAGGGGTAGAAAATAGTCCGTTGAAAGATATTGAACTTGGTCAGGCTAAAGTTTAG

Protein sequence

>Msa1371520

MESEKKSSAISNFGAWGMNVVSSVGIIMANKQLMSNNGYAFTFATTLTGFHFAVTALVGLVSNATGYSASKHVPLWELIWFSAVANISITGMNLSLMLNSVGFYQISKLSMIPVVCVMEWILHSKHYSREVKVSVMVVVIGVGVCTVTDVNVNFKGFVCACVAVVSSSLQQISIGSLQKKYSIGSFELLSKTAPIQALSLIILGPFVDYYLSGKLITNFKMSSGAIVFILLSCTLAVFCNVSQYLCIGRFSAVSFQVLGHMKTLCVLTLGWLLFDSELTFKNIMGMVLAVVGMVIYSWAVELEKQPNAKTLPHSKNSLTEEEIRLLKEGVENSPLKDIELGQAKV*