AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0043980


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0043980 MtrunA17_Chr1g0210521 94.538 238 1 1 6 231 1 238 2.53e-166 458
Msa0043980 MtrunA17_Chr1g0169861 49.583 240 90 3 4 231 49 269 1.75e-83 249
Msa0043980 MtrunA17_Chr4g0010271 52.101 238 83 2 6 231 1 219 5.01e-83 246
Msa0043980 MtrunA17_Chr7g0237561 52.301 239 81 3 6 231 1 219 3.47e-81 242
Msa0043980 MtrunA17_Chr2g0296021 48.319 238 92 2 6 231 1 219 1.69e-80 240
Msa0043980 MtrunA17_Chr4g0043521 53.052 213 69 3 7 207 4 197 1.57e-79 238
Msa0043980 MtrunA17_Chr2g0291651 53.991 213 67 3 7 207 6 199 9.71e-79 236
Msa0043980 MtrunA17_Chr7g0237521 47.196 214 82 3 6 207 1 195 3.19e-67 206
Msa0043980 MtrunA17_Chr1g0169851 45.570 158 52 2 57 199 15 153 3.74e-42 140
Msa0043980 MtrunA17_Chr4g0010211 51.200 125 42 1 58 182 4 109 2.69e-41 136
Msa0043980 MtrunA17_Chr5g0441741 32.759 232 122 4 10 228 2 212 3.76e-40 137
Msa0043980 MtrunA17_Chr4g0026121 31.897 232 124 5 10 228 2 212 9.26e-37 128
Msa0043980 MtrunA17_Chr4g0064371 31.799 239 120 6 10 231 2 214 2.94e-36 127
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0043980 AT3G54300.3 81.513 238 32 1 6 231 1 238 1.25e-139 391
Msa0043980 AT3G54300.2 81.513 238 32 1 6 231 1 238 1.25e-139 391
Msa0043980 AT3G54300.1 81.513 238 32 1 6 231 1 238 1.25e-139 391
Msa0043980 AT1G04760.2 52.521 238 82 2 6 231 1 219 3.70e-84 249
Msa0043980 AT1G04760.1 52.521 238 82 2 6 231 1 219 3.70e-84 249
Msa0043980 AT2G32670.1 53.361 238 80 2 6 231 66 284 2.93e-82 247
Msa0043980 AT2G33120.1 53.361 238 80 3 6 231 1 219 8.35e-82 244
Msa0043980 AT1G04750.1 53.361 238 80 3 6 231 1 219 9.63e-81 241
Msa0043980 AT2G33120.2 51.626 246 80 3 6 231 1 227 2.36e-80 240
Msa0043980 AT2G33110.1 43.277 238 100 4 6 231 1 215 1.22e-58 185
Msa0043980 AT4G15780.1 44.949 198 77 3 6 190 1 179 2.87e-56 177
Msa0043980 AT2G33110.2 46.409 181 66 3 6 174 1 162 4.37e-51 164
Msa0043980 AT1G04750.2 55.696 158 51 2 74 231 3 141 1.19e-50 162
Msa0043980 AT1G04750.4 55.696 158 51 2 74 231 3 141 1.19e-50 162
Msa0043980 AT1G04750.3 55.696 158 51 2 74 231 3 141 1.19e-50 162
Msa0043980 AT5G11150.1 34.322 236 115 5 10 231 2 211 5.14e-41 140
Msa0043980 AT5G11150.2 34.322 236 115 5 10 231 2 211 8.41e-41 139
Msa0043980 AT4G32150.1 34.450 209 103 4 10 205 2 189 1.57e-37 130
Msa0043980 AT5G22360.1 30.472 233 127 4 10 228 2 213 5.00e-37 129
Msa0043980 AT2G25340.1 33.190 232 121 4 10 228 2 212 7.80e-35 124
Msa0043980 AT2G33120.3 63.953 86 31 0 146 231 52 137 6.60e-28 103
Msa0043980 AT3G24890.2 51.163 86 36 2 133 212 22 107 5.00e-21 85.5
Msa0043980 AT3G24890.1 65.909 44 15 0 133 176 22 65 2.30e-14 66.2
Msa0043980 AT3G24890.4 65.909 44 15 0 133 176 22 65 2.30e-14 66.2
Msa0043980 AT3G24890.3 65.909 44 15 0 133 176 22 65 2.30e-14 66.2
Msa0043980 AT3G24890.5 65.909 44 15 0 133 176 22 65 2.30e-14 66.2

Find 68 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAATCTTGATAGAGAATT+TGG 0.088044 1_1:+75459894 Msa0043980:CDS
AAGAAATTGAATTCTGTATT+TGG 0.098661 1_1:+75462474 Msa0043980:three_prime_UTR
TTATCTTAGTTATAATATTA+TGG 0.161768 1_1:+75462412 Msa0043980:CDS
TTCCACTTGTACATTGAATT+TGG 0.179897 1_1:+75462527 Msa0043980:three_prime_UTR
AATTTGGTGCATGGAATTTA+TGG 0.221994 1_1:+75462543 Msa0043980:three_prime_UTR
TGGGGAGAAGATTGAACTTT+TGG 0.275778 1_1:+75462184 Msa0043980:CDS
ATCACAAGAATAAGTGTATT+TGG 0.280428 1_1:-75459288 None:intergenic
ATTATAGCTGACATAATAAC+TGG 0.284197 1_1:+75462626 Msa0043980:three_prime_UTR
TATCTTAGTTATAATATTAT+GGG 0.315233 1_1:+75462413 Msa0043980:CDS
GATAGTTTACTCATTTCTTC+AGG 0.318737 1_1:-75460039 None:intergenic
AGAAATTGAATTCTGTATTT+GGG 0.331639 1_1:+75462475 Msa0043980:three_prime_UTR
CTCCCACCATCAGCTTCATT+TGG 0.335673 1_1:-75462380 None:intergenic
GTTATGCAGGCCAAGTCTTA+AGG 0.350766 1_1:+75459990 Msa0043980:intron
TGCTAAAACAACAGTTCCTT+TGG 0.361705 1_1:-75459192 None:intergenic
AACGGAAAACTTGCAGTTCC+AGG 0.368337 1_1:+75462214 Msa0043980:CDS
TTAGCTGCCTGCCCTGCCTC+TGG 0.383925 1_1:-75462332 None:intergenic
GGCTGACAGCTTCCAGAGGC+AGG 0.400419 1_1:+75462320 Msa0043980:intron
GCAGAACACACTCAATATAC+TGG 0.403286 1_1:+75459212 Msa0043980:CDS
ATTCTGTATTTGGGCACATA+AGG 0.404731 1_1:+75462484 Msa0043980:three_prime_UTR
ACAATCTTGATAGAGAATTT+GGG 0.414431 1_1:+75459895 Msa0043980:CDS
TATTATGGGTTATTGCTTGT+GGG 0.421870 1_1:+75462427 Msa0043980:CDS
ACAGCTTCCAGAGGCAGGGC+AGG 0.424399 1_1:+75462325 Msa0043980:CDS
GATGACTTTAACCAGCGTTA+TGG 0.433674 1_1:+75459786 Msa0043980:CDS
TTATGCAGGCCAAGTCTTAA+GGG 0.435187 1_1:+75459991 Msa0043980:intron
GGCAGGGCAGGCAGCTAAGA+AGG 0.436079 1_1:+75462337 Msa0043980:CDS
GAGTAAACTATCAAAGTTGA+AGG 0.456658 1_1:+75460050 Msa0043980:CDS
GTGTATTTGGTGCTATTTGA+AGG 0.464053 1_1:-75459275 None:intergenic
GTTGTTGCTGATGAATCAAT+TGG 0.466016 1_1:+75459726 Msa0043980:CDS
ATTATGGGTTATTGCTTGTG+GGG 0.475053 1_1:+75462428 Msa0043980:CDS
TTCTGTATTTGGGCACATAA+GGG 0.476777 1_1:+75462485 Msa0043980:three_prime_UTR
GTTTACTCATTTCTTCAGGA+TGG 0.480252 1_1:-75460035 None:intergenic
ATATTATGGGTTATTGCTTG+TGG 0.493605 1_1:+75462426 Msa0043980:CDS
GGCTCAAATAACTGAGGTCA+AGG 0.502250 1_1:+75460071 Msa0043980:CDS
TTTACTCATTTCTTCAGGAT+GGG 0.513008 1_1:-75460034 None:intergenic
CACCAAATTCAATGTACAAG+TGG 0.530457 1_1:-75462529 None:intergenic
TTATGGGTTATTGCTTGTGG+GGG 0.536160 1_1:+75462429 Msa0043980:CDS
AAATACACTTATTCTTGTGA+TGG 0.544278 1_1:+75459290 Msa0043980:CDS
CTCAAATAACTGAGGTCAAG+GGG 0.547294 1_1:+75460073 Msa0043980:CDS
ATATATAGCTTTGTTGCCAA+AGG 0.547808 1_1:+75459176 Msa0043980:CDS
TGCATATGCCCCTTAAGACT+TGG 0.551661 1_1:-75460000 None:intergenic
ATGAAGCTGATGGTGGGAGG+AGG 0.554494 1_1:+75462384 Msa0043980:CDS
TGAGGTCAAGGGGATAATGA+TGG 0.556128 1_1:+75460083 Msa0043980:CDS
ATAATATTATAACTAAGATA+AGG 0.566690 1_1:-75462410 None:intergenic
TGAAGCTTGTGCTATACTGC+TGG 0.576605 1_1:+75462585 Msa0043980:three_prime_UTR
CATCATCATCAGCAAGTGGA+TGG 0.582788 1_1:-75459833 None:intergenic
TCCTCATCATCATCAGCAAG+TGG 0.587787 1_1:-75459837 None:intergenic
ATTCAAGCATTGAACAGCAA+TGG 0.590197 1_1:-75459246 None:intergenic
GCTCAAATAACTGAGGTCAA+GGG 0.590488 1_1:+75460072 Msa0043980:CDS
TTATAGCTGACATAATAACT+GGG 0.591390 1_1:+75462627 Msa0043980:three_prime_UTR
TGTACATTGAATTTGGTGCA+TGG 0.594394 1_1:+75462534 Msa0043980:three_prime_UTR
CTCCAAATGAAGCTGATGGT+GGG 0.596961 1_1:+75462378 Msa0043980:CDS
AATGATGGATAATATTGAGA+AGG 0.603558 1_1:+75460098 Msa0043980:CDS
TCTCCAAATGAAGCTGATGG+TGG 0.603558 1_1:+75462377 Msa0043980:CDS
TAATACTAGCACCATAACGC+TGG 0.607184 1_1:-75459797 None:intergenic
GCTGACAGCTTCCAGAGGCA+GGG 0.612920 1_1:+75462321 Msa0043980:CDS
TATGCAGGCCAAGTCTTAAG+GGG 0.622221 1_1:+75459992 Msa0043980:intron
GGCAGCTAAGAAGGAAGATG+TGG 0.627425 1_1:+75462346 Msa0043980:CDS
AGCTGACATAATAACTGGGG+TGG 0.627919 1_1:+75462631 Msa0043980:three_prime_UTR
TTTGAAGGTGTTGGATCGTG+GGG 0.629493 1_1:+75462166 Msa0043980:intron
TTGCTGATGAATCAATTGGA+AGG 0.631302 1_1:+75459730 Msa0043980:CDS
TTGATTCATCAGCAACAACA+AGG 0.631330 1_1:-75459722 None:intergenic
TTTGTGAGAATGAGTCAAAG+GGG 0.636577 1_1:+75459149 Msa0043980:CDS
CAAATGAAGCTGATGGTGGG+AGG 0.647708 1_1:+75462381 Msa0043980:CDS
GAATCTCCAAATGAAGCTGA+TGG 0.655894 1_1:+75462374 Msa0043980:CDS
TCCACTTGCTGATGATGATG+AGG 0.664896 1_1:+75459836 Msa0043980:CDS
TTTAGGCTGACAGCTTCCAG+AGG 0.685949 1_1:+75462316 Msa0043980:intron
GTTGAAGGCTCAAATAACTG+AGG 0.694430 1_1:+75460065 Msa0043980:CDS
TATAGCTGACATAATAACTG+GGG 0.717486 1_1:+75462628 Msa0043980:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATATTATAACTAAGATA+AGG - chr1_1:75462413-75462432 None:intergenic 10.0%
!! TTATCTTAGTTATAATATTA+TGG + chr1_1:75462412-75462431 Msa0043980:CDS 10.0%
!! TATCTTAGTTATAATATTAT+GGG + chr1_1:75462413-75462432 Msa0043980:CDS 10.0%
!!! TATAGTAAGTTTTTTTTGTT+TGG + chr1_1:75459431-75459450 Msa0043980:intron 15.0%
!!! ATAACGATTTGTTTTTTTTT+TGG - chr1_1:75459603-75459622 None:intergenic 15.0%
!!! TTAAACCTAAATCATTTTTA+CGG - chr1_1:75460666-75460685 None:intergenic 15.0%
!!! AAAAATGATTTAGGTTTAAA+TGG + chr1_1:75460667-75460686 Msa0043980:intron 15.0%
!! CTGAAGAATATAATTATATA+AGG - chr1_1:75460851-75460870 None:intergenic 15.0%
!!! ATATTTTATGAGTAATCAAA+AGG - chr1_1:75461821-75461840 None:intergenic 15.0%
!!! AATTTTTCTTTTGGTTAAAT+TGG + chr1_1:75461905-75461924 Msa0043980:intron 15.0%
!!! ATTTTTCTTTTGGTTAAATT+GGG + chr1_1:75461906-75461925 Msa0043980:intron 15.0%
!! TGAAACATAAATCATATATA+CGG - chr1_1:75462042-75462061 None:intergenic 15.0%
!! ATTTATTTGCGTTAAAATTT+AGG + chr1_1:75462299-75462318 Msa0043980:intron 15.0%
!!! TTACTATTCTAGTTTTCTTT+AGG + chr1_1:75460893-75460912 Msa0043980:intron 20.0%
!! TTAAACCTTCCAAAAAAAAT+TGG - chr1_1:75461376-75461395 None:intergenic 20.0%
!! TAGCTAATAAAAATTGACAT+GGG + chr1_1:75461460-75461479 Msa0043980:intron 20.0%
!! ATTGTCTTTATCTTTATAAC+AGG + chr1_1:75461654-75461673 Msa0043980:intron 20.0%
!! ATGTTGTTAAATATAAGAGA+AGG - chr1_1:75461681-75461700 None:intergenic 20.0%
!!! AACTGTGATAATTTTTCTTT+TGG + chr1_1:75461896-75461915 Msa0043980:intron 20.0%
!! ATTCTAATTTAAGTATCCAA+CGG - chr1_1:75461953-75461972 None:intergenic 20.0%
!!! ATATACTATACTTTTTATGC+CGG + chr1_1:75461971-75461990 Msa0043980:intron 20.0%
!! AAGAAATTGAATTCTGTATT+TGG + chr1_1:75462474-75462493 Msa0043980:three_prime_UTR 20.0%
!! AGAAATTGAATTCTGTATTT+GGG + chr1_1:75462475-75462494 Msa0043980:three_prime_UTR 20.0%
!!! GAATTTATGGTTACTTTTAT+TGG + chr1_1:75462556-75462575 Msa0043980:three_prime_UTR 20.0%
! ATCACAAGAATAAGTGTATT+TGG - chr1_1:75459291-75459310 None:intergenic 25.0%
! AAATACACTTATTCTTGTGA+TGG + chr1_1:75459290-75459309 Msa0043980:CDS 25.0%
! TAAAAAACGCTATAATTGCA+GGG - chr1_1:75459404-75459423 None:intergenic 25.0%
! TACAATCTTGATAGAGAATT+TGG + chr1_1:75459894-75459913 Msa0043980:CDS 25.0%
! ACAATCTTGATAGAGAATTT+GGG + chr1_1:75459895-75459914 Msa0043980:CDS 25.0%
!!! AATGATGGATAATATTGAGA+AGG + chr1_1:75460098-75460117 Msa0043980:CDS 25.0%
! TTGCCTTTAAATGATATACA+AGG + chr1_1:75460263-75460282 Msa0043980:intron 25.0%
! TGCCTTTAAATGATATACAA+GGG + chr1_1:75460264-75460283 Msa0043980:intron 25.0%
! ATCCCTTGTATATCATTTAA+AGG - chr1_1:75460269-75460288 None:intergenic 25.0%
!!! TGTATTTTGATTATGCTTTC+TGG + chr1_1:75460324-75460343 Msa0043980:intron 25.0%
!! GTATACTTTAGCTTAAAATC+AGG + chr1_1:75460525-75460544 Msa0043980:intron 25.0%
! AGGAGAATATATTAGATAGA+AGG + chr1_1:75460585-75460604 Msa0043980:intron 25.0%
!!! TATTCATTTCAAGTTACGAA+AGG + chr1_1:75460815-75460834 Msa0043980:intron 25.0%
!!! ATTCATTTCAAGTTACGAAA+GGG + chr1_1:75460816-75460835 Msa0043980:intron 25.0%
!! TTATATGCATGCATTTTCTA+AGG + chr1_1:75460968-75460987 Msa0043980:intron 25.0%
!!! GAGAAATCTTTCACTTTTTT+TGG + chr1_1:75461054-75461073 Msa0043980:intron 25.0%
!!! TAATTGGAGCCAATTTTTTT+TGG + chr1_1:75461364-75461383 Msa0043980:intron 25.0%
! CTAGCTAATAAAAATTGACA+TGG + chr1_1:75461459-75461478 Msa0043980:intron 25.0%
!! CATTTCAACTTTTGATGTTT+AGG + chr1_1:75461508-75461527 Msa0043980:intron 25.0%
! TTCTAATTTAAGTATCCAAC+GGG - chr1_1:75461952-75461971 None:intergenic 25.0%
! AGATTGTCTTAATAATCATC+CGG - chr1_1:75461993-75462012 None:intergenic 25.0%
!!! TTATGTTTCAGTTTTAAACC+AGG + chr1_1:75462052-75462071 Msa0043980:intron 25.0%
! GTGCTTTATATTCAAAAACA+TGG - chr1_1:75462120-75462139 None:intergenic 25.0%
! TTTGGATAATAGTTAATACC+TGG - chr1_1:75462235-75462254 None:intergenic 25.0%
! ATTATAGCTGACATAATAAC+TGG + chr1_1:75462626-75462645 Msa0043980:three_prime_UTR 25.0%
! TTATAGCTGACATAATAACT+GGG + chr1_1:75462627-75462646 Msa0043980:three_prime_UTR 25.0%
! TTTTTGTGAGAATGAGTCAA+AGG + chr1_1:75459147-75459166 Msa0043980:CDS 30.0%
! TTTTGTGAGAATGAGTCAAA+GGG + chr1_1:75459148-75459167 Msa0043980:CDS 30.0%
!! ATATATAGCTTTGTTGCCAA+AGG + chr1_1:75459176-75459195 Msa0043980:CDS 30.0%
CTAAAAAACGCTATAATTGC+AGG - chr1_1:75459405-75459424 None:intergenic 30.0%
!!! TTCCTTTTGTGTTTTTGGAA+CGG + chr1_1:75459757-75459776 Msa0043980:CDS 30.0%
TTTACTCATTTCTTCAGGAT+GGG - chr1_1:75460037-75460056 None:intergenic 30.0%
GATAGTTTACTCATTTCTTC+AGG - chr1_1:75460042-75460061 None:intergenic 30.0%
GAGTAAACTATCAAAGTTGA+AGG + chr1_1:75460050-75460069 Msa0043980:CDS 30.0%
! AAATGCATGTGTGTGTTATT+AGG - chr1_1:75460130-75460149 None:intergenic 30.0%
ATACTACCTATTCTTATGTC+TGG + chr1_1:75460214-75460233 Msa0043980:intron 30.0%
!! TTTTGATTATGCTTTCTGGT+TGG + chr1_1:75460328-75460347 Msa0043980:intron 30.0%
!! TAAGAGTGTTTAGATGTGTA+TGG + chr1_1:75460357-75460376 Msa0043980:intron 30.0%
CGATAAACAATGACATCATT+TGG + chr1_1:75460401-75460420 Msa0043980:intron 30.0%
!!! AAAGTTTTTTCCAAACTAGG+TGG - chr1_1:75460442-75460461 None:intergenic 30.0%
ACCTAGTTTGGAAAAAACTT+TGG + chr1_1:75460441-75460460 Msa0043980:intron 30.0%
!!! ACCAAAGTTTTTTCCAAACT+AGG - chr1_1:75460445-75460464 None:intergenic 30.0%
TAGTTTGGAAAAAACTTTGG+TGG + chr1_1:75460444-75460463 Msa0043980:intron 30.0%
TGGTTATGATATTCTTACCT+GGG + chr1_1:75460464-75460483 Msa0043980:intron 30.0%
! ACTTTAGCTTAAAATCAGGA+AGG + chr1_1:75460529-75460548 Msa0043980:intron 30.0%
ATATTAGATAGAAGGTAGTC+TGG + chr1_1:75460593-75460612 Msa0043980:intron 30.0%
AAGATAGGCCAAAAATTTAC+AGG + chr1_1:75460627-75460646 Msa0043980:intron 30.0%
!! CCTAAATCATTTTTACGGTT+TGG - chr1_1:75460661-75460680 None:intergenic 30.0%
CCAAACCGTAAAAATGATTT+AGG + chr1_1:75460658-75460677 Msa0043980:intron 30.0%
! ATATAGAAGCTTTTCCCATT+AGG - chr1_1:75460752-75460771 None:intergenic 30.0%
!!! CATTTTCTAAGGCATTGTTT+GGG + chr1_1:75460979-75460998 Msa0043980:intron 30.0%
AATTTGAAGGAACTCGTATA+GGG - chr1_1:75461187-75461206 None:intergenic 30.0%
TAATTTGAAGGAACTCGTAT+AGG - chr1_1:75461188-75461207 None:intergenic 30.0%
AGAGAATCCTTCTAATTTGA+AGG - chr1_1:75461200-75461219 None:intergenic 30.0%
! AAAAATAGAGGACTTTGAGA+GGG - chr1_1:75461256-75461275 None:intergenic 30.0%
AAAAAATAGAGGACTTTGAG+AGG - chr1_1:75461257-75461276 None:intergenic 30.0%
ACAATTTCAAACATAGCTAG+AGG - chr1_1:75461639-75461658 None:intergenic 30.0%
AAGCAAATCTTATAAAGCCA+TGG - chr1_1:75461741-75461760 None:intergenic 30.0%
!! ATGGCTTTATAAGATTTGCT+TGG + chr1_1:75461740-75461759 Msa0043980:intron 30.0%
!! TGGCTTTATAAGATTTGCTT+GGG + chr1_1:75461741-75461760 Msa0043980:intron 30.0%
! AAATGTTTTCTTCTGATTCC+TGG - chr1_1:75462073-75462092 None:intergenic 30.0%
!! TGAACTTTTGGTGGATAAAA+CGG + chr1_1:75462196-75462215 Msa0043980:CDS 30.0%
! ATATTATGGGTTATTGCTTG+TGG + chr1_1:75462426-75462445 Msa0043980:CDS 30.0%
! TATTATGGGTTATTGCTTGT+GGG + chr1_1:75462427-75462446 Msa0043980:CDS 30.0%
TTCCACTTGTACATTGAATT+TGG + chr1_1:75462527-75462546 Msa0043980:three_prime_UTR 30.0%
!! AATTTGGTGCATGGAATTTA+TGG + chr1_1:75462543-75462562 Msa0043980:three_prime_UTR 30.0%
TATAGCTGACATAATAACTG+GGG + chr1_1:75462628-75462647 Msa0043980:three_prime_UTR 30.0%
TTTGTGAGAATGAGTCAAAG+GGG + chr1_1:75459149-75459168 Msa0043980:CDS 35.0%
TGCTAAAACAACAGTTCCTT+TGG - chr1_1:75459195-75459214 None:intergenic 35.0%
!! ATTCAAGCATTGAACAGCAA+TGG - chr1_1:75459249-75459268 None:intergenic 35.0%
!! GTGTATTTGGTGCTATTTGA+AGG - chr1_1:75459278-75459297 None:intergenic 35.0%
ATTGTCCAAGAGGAAATTGA+AGG - chr1_1:75459321-75459340 None:intergenic 35.0%
TTCAATTTCCTCTTGGACAA+TGG + chr1_1:75459320-75459339 Msa0043980:intron 35.0%
CAACAGTCTTCAAATTTGCA+GGG - chr1_1:75459464-75459483 None:intergenic 35.0%
!! TTTAGTTCTGTCGTCATACA+CGG + chr1_1:75459486-75459505 Msa0043980:intron 35.0%
TCACATGGCATGATTATATG+GGG - chr1_1:75459512-75459531 None:intergenic 35.0%
GTCACATGGCATGATTATAT+GGG - chr1_1:75459513-75459532 None:intergenic 35.0%
AGACCCTAAATCAGCTAATT+GGG - chr1_1:75459545-75459564 None:intergenic 35.0%
TAGACCCTAAATCAGCTAAT+TGG - chr1_1:75459546-75459565 None:intergenic 35.0%
TTGATTCATCAGCAACAACA+AGG - chr1_1:75459725-75459744 None:intergenic 35.0%
GTTGTTGCTGATGAATCAAT+TGG + chr1_1:75459726-75459745 Msa0043980:CDS 35.0%
TTGCTGATGAATCAATTGGA+AGG + chr1_1:75459730-75459749 Msa0043980:CDS 35.0%
! GAGTGTTCCTTTTGTGTTTT+TGG + chr1_1:75459752-75459771 Msa0043980:CDS 35.0%
!!! TCCTTTTGTGTTTTTGGAAC+GGG + chr1_1:75459758-75459777 Msa0043980:CDS 35.0%
TCTTGATAGAGAATTTGGGT+TGG + chr1_1:75459899-75459918 Msa0043980:intron 35.0%
!!! GTATTTTGATCTCGTTATGC+AGG + chr1_1:75459977-75459996 Msa0043980:intron 35.0%
GTTTACTCATTTCTTCAGGA+TGG - chr1_1:75460038-75460057 None:intergenic 35.0%
GTACATCCAGACATAAGAAT+AGG - chr1_1:75460223-75460242 None:intergenic 35.0%
GTGGTTATGATATTCTTACC+TGG + chr1_1:75460463-75460482 Msa0043980:intron 35.0%
GGTTATGATATTCTTACCTG+GGG + chr1_1:75460465-75460484 Msa0043980:intron 35.0%
GTTATGATATTCTTACCTGG+GGG + chr1_1:75460466-75460485 Msa0043980:intron 35.0%
TTATGATATTCTTACCTGGG+GGG + chr1_1:75460467-75460486 Msa0043980:intron 35.0%
CTTATGATACTCTATCGTCT+TGG - chr1_1:75460567-75460586 None:intergenic 35.0%
! CAAGACGATAGAGTATCATA+AGG + chr1_1:75460565-75460584 Msa0043980:intron 35.0%
! CGCTTGATCCTGTAAATTTT+TGG - chr1_1:75460638-75460657 None:intergenic 35.0%
GGTTAGTGACATGAATCAAA+TGG - chr1_1:75460726-75460745 None:intergenic 35.0%
!!! GCATTTTCTAAGGCATTGTT+TGG + chr1_1:75460978-75460997 Msa0043980:intron 35.0%
ATTTGAAGGAACTCGTATAG+GGG - chr1_1:75461186-75461205 None:intergenic 35.0%
ACGAGTTCCTTCAAATTAGA+AGG + chr1_1:75461190-75461209 Msa0043980:intron 35.0%
! AAAATAGAGGACTTTGAGAG+GGG - chr1_1:75461255-75461274 None:intergenic 35.0%
AGACGGAACTTTCTGTTAAT+TGG + chr1_1:75461348-75461367 Msa0043980:intron 35.0%
!!! TGGAGCCAATTTTTTTTGGA+AGG + chr1_1:75461368-75461387 Msa0043980:intron 35.0%
! GATGTTTAGGCATACTGATT+AGG + chr1_1:75461521-75461540 Msa0043980:intron 35.0%
! TAGGCATACTGATTAGGATT+TGG + chr1_1:75461527-75461546 Msa0043980:intron 35.0%
ATGTTGATCCAGTGATATGA+GGG - chr1_1:75461556-75461575 None:intergenic 35.0%
ATATCACTGGATCAACATGT+AGG + chr1_1:75461558-75461577 Msa0043980:intron 35.0%
ATCACAGTTAAAACCTCTGT+TGG - chr1_1:75461885-75461904 None:intergenic 35.0%
TTAAATTGGGATACTGCAGA+GGG + chr1_1:75461919-75461938 Msa0043980:intron 35.0%
!!! ATTTGCACTCGTTGTTTTGA+AGG + chr1_1:75462151-75462170 Msa0043980:intron 35.0%
AGTTCGGAAATGTTTGGATT+TGG - chr1_1:75462253-75462272 None:intergenic 35.0%
TTTCAGAGTTCGGAAATGTT+TGG - chr1_1:75462259-75462278 None:intergenic 35.0%
CAGTAGATTGTTTCAGAGTT+CGG - chr1_1:75462269-75462288 None:intergenic 35.0%
! ATTATGGGTTATTGCTTGTG+GGG + chr1_1:75462428-75462447 Msa0043980:CDS 35.0%
ATTCTGTATTTGGGCACATA+AGG + chr1_1:75462484-75462503 Msa0043980:three_prime_UTR 35.0%
TTCTGTATTTGGGCACATAA+GGG + chr1_1:75462485-75462504 Msa0043980:three_prime_UTR 35.0%
CACCAAATTCAATGTACAAG+TGG - chr1_1:75462532-75462551 None:intergenic 35.0%
!! TGTACATTGAATTTGGTGCA+TGG + chr1_1:75462534-75462553 Msa0043980:three_prime_UTR 35.0%
GCAGAACACACTCAATATAC+TGG + chr1_1:75459212-75459231 Msa0043980:CDS 40.0%
TCACACCTTCAATTTCCTCT+TGG + chr1_1:75459313-75459332 Msa0043980:intron 40.0%
! TTCCTCTTGGACAATGGATT+CGG + chr1_1:75459326-75459345 Msa0043980:intron 40.0%
GCAACAGTCTTCAAATTTGC+AGG - chr1_1:75459465-75459484 None:intergenic 40.0%
CGTCACATGGCATGATTATA+TGG - chr1_1:75459514-75459533 None:intergenic 40.0%
! ATGGCCCAATTAGCTGATTT+AGG + chr1_1:75459538-75459557 Msa0043980:intron 40.0%
! TGGCCCAATTAGCTGATTTA+GGG + chr1_1:75459539-75459558 Msa0043980:intron 40.0%
CACATGTTATGTAACAGCGA+TGG - chr1_1:75459682-75459701 None:intergenic 40.0%
ACCCGTTCCAAAAACACAAA+AGG - chr1_1:75459762-75459781 None:intergenic 40.0%
GATGACTTTAACCAGCGTTA+TGG + chr1_1:75459786-75459805 Msa0043980:CDS 40.0%
TAATACTAGCACCATAACGC+TGG - chr1_1:75459800-75459819 None:intergenic 40.0%
TTATGCAGGCCAAGTCTTAA+GGG + chr1_1:75459991-75460010 Msa0043980:intron 40.0%
GTTGAAGGCTCAAATAACTG+AGG + chr1_1:75460065-75460084 Msa0043980:CDS 40.0%
GCTCAAATAACTGAGGTCAA+GGG + chr1_1:75460072-75460091 Msa0043980:CDS 40.0%
CTCAAATAACTGAGGTCAAG+GGG + chr1_1:75460073-75460092 Msa0043980:CDS 40.0%
! ACTAGGTGGAGTTGATTAGA+TGG - chr1_1:75460428-75460447 None:intergenic 40.0%
CTAATCAACTCCACCTAGTT+TGG + chr1_1:75460429-75460448 Msa0043980:intron 40.0%
CTGGAAGTTAGAGGTAAGAT+AGG + chr1_1:75460612-75460631 Msa0043980:intron 40.0%
! AGAAGCTTTTCCCATTAGGT+CGG - chr1_1:75460748-75460767 None:intergenic 40.0%
AATCTTCATCTAGTCCCACT+CGG - chr1_1:75460936-75460955 None:intergenic 40.0%
GCATGCATATAATGCTCAAC+TGG - chr1_1:75460960-75460979 None:intergenic 40.0%
!! TAAGGCATTGTTTGGGAGTT+TGG + chr1_1:75460986-75461005 Msa0043980:intron 40.0%
TTTGAAGGAACTCGTATAGG+GGG - chr1_1:75461185-75461204 None:intergenic 40.0%
GGAGCAAGTGGAAAAAATAG+AGG - chr1_1:75461268-75461287 None:intergenic 40.0%
!! TCTCTTTAGGCTTTGTTTGC+GGG - chr1_1:75461331-75461350 None:intergenic 40.0%
!! GTCTCTTTAGGCTTTGTTTG+CGG - chr1_1:75461332-75461351 None:intergenic 40.0%
GCAAACAAAGCCTAAAGAGA+CGG + chr1_1:75461331-75461350 Msa0043980:intron 40.0%
ACAGAAAGTTCCGTCTCTTT+AGG - chr1_1:75461344-75461363 None:intergenic 40.0%
TGTTGATCCAGTGATATGAG+GGG - chr1_1:75461555-75461574 None:intergenic 40.0%
CATGTTGATCCAGTGATATG+AGG - chr1_1:75461557-75461576 None:intergenic 40.0%
! AAAGTATCCAGCCATGATGA+AGG + chr1_1:75461612-75461631 Msa0043980:intron 40.0%
AATCTTATAAAGCCATGGCC+TGG - chr1_1:75461736-75461755 None:intergenic 40.0%
GTTAAATTGGGATACTGCAG+AGG + chr1_1:75461918-75461937 Msa0043980:intron 40.0%
!!! ACTCGTTGTTTTGAAGGTGT+TGG + chr1_1:75462157-75462176 Msa0043980:intron 40.0%
!!! TTTTGAAGGTGTTGGATCGT+GGG + chr1_1:75462165-75462184 Msa0043980:intron 40.0%
! TGGGGAGAAGATTGAACTTT+TGG + chr1_1:75462184-75462203 Msa0043980:CDS 40.0%
! GGAGAAGATTGAACTTTTGG+TGG + chr1_1:75462187-75462206 Msa0043980:CDS 40.0%
GAATCTCCAAATGAAGCTGA+TGG + chr1_1:75462374-75462393 Msa0043980:CDS 40.0%
! TTATGGGTTATTGCTTGTGG+GGG + chr1_1:75462429-75462448 Msa0043980:CDS 40.0%
TACCGAATCCATTGTCCAAG+AGG - chr1_1:75459331-75459350 None:intergenic 45.0%
AATCAGCTAATTGGGCCATG+TGG - chr1_1:75459537-75459556 None:intergenic 45.0%
!!! TGTGTTTTTGGAACGGGTGA+AGG + chr1_1:75459764-75459783 Msa0043980:CDS 45.0%
CATCATCATCAGCAAGTGGA+TGG - chr1_1:75459836-75459855 None:intergenic 45.0%
! TCCACTTGCTGATGATGATG+AGG + chr1_1:75459836-75459855 Msa0043980:CDS 45.0%
TCCTCATCATCATCAGCAAG+TGG - chr1_1:75459840-75459859 None:intergenic 45.0%
GTTATGCAGGCCAAGTCTTA+AGG + chr1_1:75459990-75460009 Msa0043980:intron 45.0%
TATGCAGGCCAAGTCTTAAG+GGG + chr1_1:75459992-75460011 Msa0043980:intron 45.0%
TGCATATGCCCCTTAAGACT+TGG - chr1_1:75460003-75460022 None:intergenic 45.0%
GGCTCAAATAACTGAGGTCA+AGG + chr1_1:75460071-75460090 Msa0043980:CDS 45.0%
TGAGGTCAAGGGGATAATGA+TGG + chr1_1:75460083-75460102 Msa0043980:CDS 45.0%
ATGTTTCCAGCGCTAATGCT+TGG + chr1_1:75460186-75460205 Msa0043980:intron 45.0%
GAAGGTAGTCTGGAAGTTAG+AGG + chr1_1:75460603-75460622 Msa0043980:intron 45.0%
ATGTCACTAACCCGACCTAA+TGG + chr1_1:75460734-75460753 Msa0043980:intron 45.0%
TGTCACTAACCCGACCTAAT+GGG + chr1_1:75460735-75460754 Msa0043980:intron 45.0%
! GAAGCTTTTCCCATTAGGTC+GGG - chr1_1:75460747-75460766 None:intergenic 45.0%
ATCTTCATCTAGTCCCACTC+GGG - chr1_1:75460935-75460954 None:intergenic 45.0%
GCATTGTTTGGGAGTTTGGA+GGG + chr1_1:75460990-75461009 Msa0043980:intron 45.0%
CATTGTTTGGGAGTTTGGAG+GGG + chr1_1:75460991-75461010 Msa0043980:intron 45.0%
TGTGGGGGTGAAAACGTATA+GGG + chr1_1:75461024-75461043 Msa0043980:intron 45.0%
GAGGGATTTGGGAAAAAGGA+AGG - chr1_1:75461289-75461308 None:intergenic 45.0%
!! TTAGGCTTTGTTTGCGGGTT+TGG - chr1_1:75461326-75461345 None:intergenic 45.0%
TTTGGATCCCCTCATATCAC+TGG + chr1_1:75461545-75461564 Msa0043980:intron 45.0%
TAGCTAGAGGACCTTCATCA+TGG - chr1_1:75461626-75461645 None:intergenic 45.0%
TCTGACAGTTAGACCAACAG+AGG + chr1_1:75461869-75461888 Msa0043980:intron 45.0%
!!! GTTTTGAAGGTGTTGGATCG+TGG + chr1_1:75462164-75462183 Msa0043980:intron 45.0%
!! TTTGAAGGTGTTGGATCGTG+GGG + chr1_1:75462166-75462185 Msa0043980:intron 45.0%
AACGGAAAACTTGCAGTTCC+AGG + chr1_1:75462214-75462233 Msa0043980:CDS 45.0%
TCTCCAAATGAAGCTGATGG+TGG + chr1_1:75462377-75462396 Msa0043980:CDS 45.0%
CTCCAAATGAAGCTGATGGT+GGG + chr1_1:75462378-75462397 Msa0043980:CDS 45.0%
TGAAGCTTGTGCTATACTGC+TGG + chr1_1:75462585-75462604 Msa0043980:three_prime_UTR 45.0%
AGCTGACATAATAACTGGGG+TGG + chr1_1:75462631-75462650 Msa0043980:three_prime_UTR 45.0%
TTTCGACCAAGCATTAGCGC+TGG - chr1_1:75460195-75460214 None:intergenic 50.0%
!! AATCAGGAAGGCACCTGTTG+TGG + chr1_1:75460541-75460560 Msa0043980:intron 50.0%
TCTATCGTCTTGGCCACAAC+AGG - chr1_1:75460557-75460576 None:intergenic 50.0%
ACTCGGGCAATTCAATGGAG+TGG - chr1_1:75460919-75460938 None:intergenic 50.0%
ACTCCATTGAATTGCCCGAG+TGG + chr1_1:75460918-75460937 Msa0043980:intron 50.0%
CTCCATTGAATTGCCCGAGT+GGG + chr1_1:75460919-75460938 Msa0043980:intron 50.0%
GGCATTGTTTGGGAGTTTGG+AGG + chr1_1:75460989-75461008 Msa0043980:intron 50.0%
CTGTGGGGGTGAAAACGTAT+AGG + chr1_1:75461023-75461042 Msa0043980:intron 50.0%
AAGGAACTCGTATAGGGGGA+GGG - chr1_1:75461181-75461200 None:intergenic 50.0%
! TAGAGGACTTTGAGAGGGGA+GGG - chr1_1:75461251-75461270 None:intergenic 50.0%
! ATAGAGGACTTTGAGAGGGG+AGG - chr1_1:75461252-75461271 None:intergenic 50.0%
GGGAAAAAGGAAGGAGCAAG+TGG - chr1_1:75461280-75461299 None:intergenic 50.0%
AGGGGAGGGATTTGGGAAAA+AGG - chr1_1:75461293-75461312 None:intergenic 50.0%
TTTGCGGGTTTGGAAGGCAA+TGG - chr1_1:75461316-75461335 None:intergenic 50.0%
!! GCTTTGTTTGCGGGTTTGGA+AGG - chr1_1:75461322-75461341 None:intergenic 50.0%
TAGAGGACCTTCATCATGGC+TGG - chr1_1:75461622-75461641 None:intergenic 50.0%
GAGACACTAGCACATGGATC+TGG - chr1_1:75461711-75461730 None:intergenic 50.0%
CTGGAAGAGACACTAGCACA+TGG - chr1_1:75461717-75461736 None:intergenic 50.0%
CATGTGCTAGTGTCTCTTCC+AGG + chr1_1:75461715-75461734 Msa0043980:intron 50.0%
TTTAGGCTGACAGCTTCCAG+AGG + chr1_1:75462316-75462335 Msa0043980:intron 50.0%
GGCAGCTAAGAAGGAAGATG+TGG + chr1_1:75462346-75462365 Msa0043980:CDS 50.0%
CTCCCACCATCAGCTTCATT+TGG - chr1_1:75462383-75462402 None:intergenic 50.0%
!! CAAATGAAGCTGATGGTGGG+AGG + chr1_1:75462381-75462400 Msa0043980:CDS 50.0%
TCATGCCATGTGACGCCACA+TGG + chr1_1:75459519-75459538 Msa0043980:intron 55.0%
ATTCTTACCTGGGGGGACTC+AGG + chr1_1:75460474-75460493 Msa0043980:intron 55.0%
GTCCCACTCGGGCAATTCAA+TGG - chr1_1:75460924-75460943 None:intergenic 55.0%
TTTGGGAGTTTGGAGGGGAG+TGG + chr1_1:75460996-75461015 Msa0043980:intron 55.0%
GAAGGAACTCGTATAGGGGG+AGG - chr1_1:75461182-75461201 None:intergenic 55.0%
! CTTTGAGAGGGGAGGGCTTT+GGG - chr1_1:75461244-75461263 None:intergenic 55.0%
! ACTTTGAGAGGGGAGGGCTT+TGG - chr1_1:75461245-75461264 None:intergenic 55.0%
GCAATGGAGGGGAGGGATTT+GGG - chr1_1:75461300-75461319 None:intergenic 55.0%
TTGGAAGGCAATGGAGGGGA+GGG - chr1_1:75461307-75461326 None:intergenic 55.0%
TTTGGAAGGCAATGGAGGGG+AGG - chr1_1:75461308-75461327 None:intergenic 55.0%
GGGTTTGGAAGGCAATGGAG+GGG - chr1_1:75461311-75461330 None:intergenic 55.0%
CGGGTTTGGAAGGCAATGGA+GGG - chr1_1:75461312-75461331 None:intergenic 55.0%
CTAGTGTCTCTTCCAGGCCA+TGG + chr1_1:75461721-75461740 Msa0043980:intron 55.0%
!! ATGAAGCTGATGGTGGGAGG+AGG + chr1_1:75462384-75462403 Msa0043980:CDS 55.0%
TTGGGCCATGTGGCGTCACA+TGG - chr1_1:75459527-75459546 None:intergenic 60.0%
GGAGTTTGGAGGGGAGTGGA+GGG + chr1_1:75461000-75461019 Msa0043980:intron 60.0%
GGCAATGGAGGGGAGGGATT+TGG - chr1_1:75461301-75461320 None:intergenic 60.0%
GCGGGTTTGGAAGGCAATGG+AGG - chr1_1:75461313-75461332 None:intergenic 60.0%
GCTGACAGCTTCCAGAGGCA+GGG + chr1_1:75462321-75462340 Msa0043980:CDS 60.0%
AGTGCTTCCTGAGTCCCCCC+AGG - chr1_1:75460484-75460503 None:intergenic 65.0%
GGGAGTTTGGAGGGGAGTGG+AGG + chr1_1:75460999-75461018 Msa0043980:intron 65.0%
!! TGAGAGGGGAGGGCTTTGGG+CGG - chr1_1:75461241-75461260 None:intergenic 65.0%
GCAGAGGGTCTGAGTCCCGT+TGG + chr1_1:75461934-75461953 Msa0043980:intron 65.0%
GGCTGACAGCTTCCAGAGGC+AGG + chr1_1:75462320-75462339 Msa0043980:intron 65.0%
ACAGCTTCCAGAGGCAGGGC+AGG + chr1_1:75462325-75462344 Msa0043980:CDS 65.0%
TTAGCTGCCTGCCCTGCCTC+TGG - chr1_1:75462335-75462354 None:intergenic 65.0%
GGCAGGGCAGGCAGCTAAGA+AGG + chr1_1:75462337-75462356 Msa0043980:CDS 65.0%
TGGAGGGGAGTGGAGGGCTG+TGG + chr1_1:75461006-75461025 Msa0043980:intron 70.0%
GGAGGGGAGTGGAGGGCTGT+GGG + chr1_1:75461007-75461026 Msa0043980:intron 70.0%
GAGGGGAGTGGAGGGCTGTG+GGG + chr1_1:75461008-75461027 Msa0043980:intron 70.0%
AGGGGAGTGGAGGGCTGTGG+GGG + chr1_1:75461009-75461028 Msa0043980:intron 70.0%
!! GAGAGGGGAGGGCTTTGGGC+GGG - chr1_1:75461240-75461259 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 75459143 75462682 75459143 ID=Msa0043980;Name=Msa0043980
chr1_1 mRNA 75459143 75462682 75459143 ID=Msa0043980-mRNA-1;Parent=Msa0043980;Name=Msa0043980-mRNA-1;_AED=0.10;_eAED=0.11;_QI=0|0.75|0.8|1|0.75|0.6|5|218|231
chr1_1 exon 75459143 75459311 75459143 ID=Msa0043980-mRNA-1:exon:25430;Parent=Msa0043980-mRNA-1
chr1_1 exon 75459718 75459916 75459718 ID=Msa0043980-mRNA-1:exon:25431;Parent=Msa0043980-mRNA-1
chr1_1 exon 75459999 75460119 75459999 ID=Msa0043980-mRNA-1:exon:25432;Parent=Msa0043980-mRNA-1
chr1_1 exon 75462173 75462235 75462173 ID=Msa0043980-mRNA-1:exon:25433;Parent=Msa0043980-mRNA-1
chr1_1 exon 75462321 75462682 75462321 ID=Msa0043980-mRNA-1:exon:25434;Parent=Msa0043980-mRNA-1
chr1_1 CDS 75459143 75459311 75459143 ID=Msa0043980-mRNA-1:cds;Parent=Msa0043980-mRNA-1
chr1_1 CDS 75459718 75459916 75459718 ID=Msa0043980-mRNA-1:cds;Parent=Msa0043980-mRNA-1
chr1_1 CDS 75459999 75460119 75459999 ID=Msa0043980-mRNA-1:cds;Parent=Msa0043980-mRNA-1
chr1_1 CDS 75462173 75462235 75462173 ID=Msa0043980-mRNA-1:cds;Parent=Msa0043980-mRNA-1
chr1_1 CDS 75462321 75462464 75462321 ID=Msa0043980-mRNA-1:cds;Parent=Msa0043980-mRNA-1
chr1_1 three_prime_UTR 75462465 75462682 75462465 ID=Msa0043980-mRNA-1:three_prime_utr;Parent=Msa0043980-mRNA-1
Gene Sequence

>Msa0043980

GTAGTTTTTGTGAGAATGAGTCAAAGGGGTTTGATATATAGCTTTGTTGCCAAAGGAACTGTTGTTTTAGCAGAACACACTCAATATACTGGAAATTTCAGTACCATTGCTGTTCAATGCTTGAATAAGCTTCCTTCAAATAGCACCAAATACACTTATTCTTGTGATGTTTTCCTTGTTGTTGCTGATGAATCAATTGGAAGGAGTGTTCCTTTTGTGTTTTTGGAACGGGTGAAGGATGACTTTAACCAGCGTTATGGTGCTAGTATTAAGAATGCAAGCGACCATCCACTTGCTGATGATGATGAGGACGATGATTTGTTTGAAGATAGATTTAGCATTGCATACAATCTTGATAGAGAATTTGGGCCAAGTCTTAAGGGGCATATGCAGTATTGTTTGACCCATCCTGAAGAAATGAGTAAACTATCAAAGTTGAAGGCTCAAATAACTGAGGTCAAGGGGATAATGATGGATAATATTGAGAAGGTGTTGGATCGTGGGGAGAAGATTGAACTTTTGGTGGATAAAACGGAAAACTTGCAGTTCCAGGCTGACAGCTTCCAGAGGCAGGGCAGGCAGCTAAGAAGGAAGATGTGGCTGCAGAATCTCCAAATGAAGCTGATGGTGGGAGGAGGAATCCTTATCTTAGTTATAATATTATGGGTTATTGCTTGTGGGGGTTTCAAATGTTGA

Protein sequence

>Msa0043980

VVFVRMSQRGLIYSFVAKGTVVLAEHTQYTGNFSTIAVQCLNKLPSNSTKYTYSCDVFLVVADESIGRSVPFVFLERVKDDFNQRYGASIKNASDHPLADDDEDDDLFEDRFSIAYNLDREFGPSLKGHMQYCLTHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQRQGRQLRRKMWLQNLQMKLMVGGGILILVIILWVIACGGFKC*