AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1268400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1268400 MtrunA17_Chr6g0454951 58.744 446 112 5 61 434 705 1150 1.05e-156 473
Msa1268400 MtrunA17_Chr6g0454951 72.308 65 18 0 1 65 431 495 2.03e-23 103
Msa1268400 MtrunA17_Chr6g0454851 61.702 423 104 6 57 428 705 1120 2.68e-156 471
Msa1268400 MtrunA17_Chr6g0454851 73.846 65 17 0 1 65 437 501 1.22e-23 104
Msa1268400 MtrunA17_Chr6g0454821 56.184 477 108 5 57 432 653 1129 1.66e-153 464
Msa1268400 MtrunA17_Chr6g0454821 69.231 65 20 0 1 65 385 449 6.89e-23 102
Msa1268400 MtrunA17_Chr4g0005591 56.264 455 118 5 57 430 681 1135 2.50e-152 461
Msa1268400 MtrunA17_Chr4g0005591 51.667 120 50 4 1 119 414 526 1.00e-24 107
Msa1268400 MtrunA17_Chr6g0455191 54.930 497 146 7 4 434 882 1366 5.12e-150 460
Msa1268400 MtrunA17_Chr6g0455191 76.923 65 15 0 1 65 653 717 5.94e-26 111
Msa1268400 MtrunA17_Chr7g0257531 59.908 434 123 6 23 405 228 661 1.92e-149 440
Msa1268400 MtrunA17_Chr7g0257531 75.385 65 16 0 1 65 4 68 5.80e-26 110
Msa1268400 MtrunA17_Chr4g0005871 55.580 448 114 5 60 430 743 1182 1.93e-148 452
Msa1268400 MtrunA17_Chr4g0005871 68.493 73 23 0 1 73 470 542 1.04e-23 104
Msa1268400 MtrunA17_Chr6g0455211 61.282 390 109 4 55 405 660 1046 2.21e-147 446
Msa1268400 MtrunA17_Chr6g0455211 72.308 65 18 0 1 65 389 453 1.14e-24 107
Msa1268400 MtrunA17_Chr6g0455551 55.819 464 128 8 4 405 649 1097 1.13e-143 438
Msa1268400 MtrunA17_Chr6g0455551 65.672 67 23 0 1 67 421 487 5.20e-22 99.4
Msa1268400 MtrunA17_Chr6g0454831 54.733 486 144 8 4 431 573 1040 6.08e-143 434
Msa1268400 MtrunA17_Chr6g0454831 78.125 64 14 0 1 64 345 408 7.35e-28 117
Msa1268400 MtrunA17_Chr6g0455131 57.110 429 125 6 61 430 703 1131 3.19e-141 432
Msa1268400 MtrunA17_Chr6g0455131 75.385 65 16 0 1 65 429 493 4.89e-26 111
Msa1268400 MtrunA17_Chr4g0005891 54.889 450 123 4 61 430 659 1108 3.17e-136 418
Msa1268400 MtrunA17_Chr4g0005891 70.769 65 19 0 1 65 385 449 1.69e-22 100
Msa1268400 MtrunA17_Chr6g0455251 57.683 423 129 6 60 434 747 1167 1.78e-135 417
Msa1268400 MtrunA17_Chr6g0455251 73.770 122 30 1 57 176 625 746 2.55e-49 180
Msa1268400 MtrunA17_Chr6g0455251 64.615 65 23 0 1 65 360 424 5.25e-19 90.1
Msa1268400 MtrunA17_Chr6g0454971 48.692 497 150 11 23 434 609 1085 5.56e-126 390
Msa1268400 MtrunA17_Chr6g0454971 75.385 65 16 0 1 65 385 449 1.63e-26 112
Msa1268400 MtrunA17_Chr6g0454961 47.477 535 162 14 4 431 600 1122 8.71e-123 383
Msa1268400 MtrunA17_Chr6g0454961 70.769 65 19 0 1 65 371 435 5.79e-23 102
Msa1268400 MtrunA17_Chr6g0455031 54.586 447 132 10 57 434 630 1074 2.67e-122 380
Msa1268400 MtrunA17_Chr6g0455031 63.077 65 24 0 1 65 364 428 3.01e-20 94.0
Msa1268400 MtrunA17_Chr7g0234901 48.366 459 168 6 4 405 91 537 3.86e-120 362
Msa1268400 MtrunA17_Chr4g0009101 51.870 401 123 5 61 405 1154 1540 8.67e-117 375
Msa1268400 MtrunA17_Chr4g0009101 62.687 67 25 0 1 67 880 946 8.24e-19 89.7
Msa1268400 MtrunA17_Chr4g0009041 47.312 465 153 11 4 405 1077 1512 8.73e-117 374
Msa1268400 MtrunA17_Chr4g0009041 64.179 67 24 0 1 67 850 916 8.33e-20 92.8
Msa1268400 MtrunA17_Chr4g0010711 47.109 467 179 10 4 419 1085 1534 4.64e-112 360
Msa1268400 MtrunA17_Chr4g0010711 58.209 67 28 0 1 67 355 421 1.02e-20 95.5
Msa1268400 MtrunA17_Chr4g0010711 58.824 68 27 1 1 67 855 922 2.12e-17 85.1
Msa1268400 MtrunA17_Chr7g0255681 50.249 402 143 4 61 405 1628 2029 1.05e-111 361
Msa1268400 MtrunA17_Chr7g0255681 60.294 68 26 1 1 67 1352 1419 3.26e-17 84.7
Msa1268400 MtrunA17_Chr7g0255681 48.352 91 34 2 1 90 850 928 4.61e-16 81.3
Msa1268400 MtrunA17_Chr7g0255681 60.000 65 25 1 1 64 349 413 9.53e-15 77.0
Msa1268400 MtrunA17_Chr4g0009141 45.756 483 168 12 4 426 1091 1539 3.75e-111 358
Msa1268400 MtrunA17_Chr4g0009141 59.701 67 27 0 1 67 862 928 2.05e-17 85.1
Msa1268400 MtrunA17_Chr4g0009171 49.132 403 133 5 61 405 1341 1729 9.62e-111 358
Msa1268400 MtrunA17_Chr4g0009171 68.966 116 35 1 61 176 614 728 1.82e-42 160
Msa1268400 MtrunA17_Chr4g0009171 61.765 68 25 1 1 67 1068 1135 1.15e-17 86.3
Msa1268400 MtrunA17_Chr4g0009171 59.701 67 27 0 1 67 342 408 3.01e-17 84.7
Msa1268400 MtrunA17_Chr6g0455181 59.692 325 94 5 54 344 2 323 5.94e-110 327
Msa1268400 MtrunA17_Chr4g0009241 47.768 448 165 10 4 412 1116 1533 1.61e-109 354
Msa1268400 MtrunA17_Chr4g0009241 62.687 67 25 0 1 67 884 950 1.64e-17 85.5
Msa1268400 MtrunA17_Chr4g0009241 42.268 97 51 2 1 94 381 475 2.67e-13 72.4
Msa1268400 MtrunA17_Chr4g0009301 45.140 463 166 8 4 405 1109 1544 1.48e-108 351
Msa1268400 MtrunA17_Chr4g0009301 61.194 67 26 0 1 67 882 948 4.88e-17 84.0
Msa1268400 MtrunA17_Chr4g0009401 49.127 401 129 6 66 405 1120 1506 1.02e-107 349
Msa1268400 MtrunA17_Chr4g0009401 62.687 67 25 0 1 67 838 904 1.06e-17 86.3
Msa1268400 MtrunA17_Chr4g0009401 43.617 94 52 1 1 94 340 432 1.00e-15 80.1
Msa1268400 MtrunA17_Chr6g0454871 72.541 244 63 2 58 297 8 251 3.36e-105 312
Msa1268400 MtrunA17_Chr4g0009361 43.534 464 172 7 4 403 81 518 3.43e-104 324
Msa1268400 MtrunA17_Chr4g0005851 61.204 299 94 7 23 304 598 891 3.29e-101 325
Msa1268400 MtrunA17_Chr4g0005851 72.308 65 18 0 1 65 374 438 7.44e-23 101
Msa1268400 MtrunA17_Chr2g0296451 41.975 486 213 13 2 433 88 558 7.11e-98 304
Msa1268400 MtrunA17_Chr5g0414761 41.684 487 210 12 4 434 360 828 8.17e-98 312
Msa1268400 MtrunA17_Chr5g0414761 57.377 61 26 0 5 65 135 195 1.56e-14 75.9
Msa1268400 MtrunA17_Chr8g0370511 42.584 418 194 7 61 434 619 1034 1.25e-96 312
Msa1268400 MtrunA17_Chr8g0370511 60.000 65 26 0 1 65 345 409 2.90e-17 84.7
Msa1268400 MtrunA17_Chr8g0338901 41.453 468 207 11 4 422 595 1044 1.26e-95 310
Msa1268400 MtrunA17_Chr8g0338901 56.923 65 28 0 1 65 366 430 2.35e-14 75.5
Msa1268400 MtrunA17_Chr8g0338981 40.909 484 213 12 7 434 575 1041 3.70e-95 309
Msa1268400 MtrunA17_Chr8g0338981 48.000 75 39 0 1 75 343 417 5.64e-15 77.4
Msa1268400 MtrunA17_Chr8g0338881 44.417 412 185 6 64 432 651 1061 8.10e-94 306
Msa1268400 MtrunA17_Chr8g0338881 61.404 57 22 0 1 57 374 430 3.67e-15 78.2
Msa1268400 MtrunA17_Chr5g0420331 43.000 400 184 6 61 418 620 1017 3.82e-93 302
Msa1268400 MtrunA17_Chr5g0420331 58.462 65 27 0 1 65 346 410 8.29e-17 83.2
Msa1268400 MtrunA17_Chr8g0338841 42.328 378 165 4 61 402 84 444 1.45e-92 288
Msa1268400 MtrunA17_Chr4g0014831 75.743 202 49 0 60 261 403 604 3.94e-92 291
Msa1268400 MtrunA17_Chr4g0014831 65.672 67 23 0 1 67 130 196 9.99e-23 100
Msa1268400 MtrunA17_Chr8g0339021 41.707 410 189 8 61 424 609 1014 3.97e-92 300
Msa1268400 MtrunA17_Chr8g0339021 56.923 65 28 0 1 65 339 403 1.01e-16 82.8
Msa1268400 MtrunA17_Chr3g0085731 44.286 420 170 9 61 434 633 1034 6.98e-92 301
Msa1268400 MtrunA17_Chr3g0085731 63.077 65 24 0 1 65 359 423 4.11e-19 90.5
Msa1268400 MtrunA17_Chr8g0339011 40.167 478 211 11 4 424 568 1027 1.34e-91 299
Msa1268400 MtrunA17_Chr8g0339011 53.846 65 30 0 1 65 339 403 1.01e-13 73.6
Msa1268400 MtrunA17_Chr5g0420341 42.250 400 187 6 61 418 620 1017 2.19e-91 298
Msa1268400 MtrunA17_Chr5g0420341 55.385 65 29 0 1 65 346 410 1.63e-14 75.9
Msa1268400 MtrunA17_Chr8g0339031 43.210 405 177 7 61 419 629 1026 1.48e-87 288
Msa1268400 MtrunA17_Chr8g0339031 60.000 65 26 0 1 65 355 419 6.85e-17 83.6
Msa1268400 MtrunA17_Chr8g0352221 44.386 383 184 9 61 434 589 951 7.48e-82 272
Msa1268400 MtrunA17_Chr8g0352221 50.769 65 32 0 1 65 339 403 1.17e-14 76.6
Msa1268400 MtrunA17_Chr5g0430541 40.885 384 175 8 61 405 143 513 2.80e-81 262
Msa1268400 MtrunA17_Chr6g0454911 55.224 268 79 5 206 434 1 266 2.06e-78 244
Msa1268400 MtrunA17_Chr6g0455221 77.576 165 35 1 57 219 618 782 4.93e-76 257
Msa1268400 MtrunA17_Chr6g0455221 43.478 299 93 7 206 434 866 1158 2.23e-53 192
Msa1268400 MtrunA17_Chr6g0455221 68.657 67 21 0 1 67 350 416 3.19e-22 99.8
Msa1268400 MtrunA17_Chr7g0223531 39.614 414 200 7 70 434 638 1050 2.38e-75 254
Msa1268400 MtrunA17_Chr7g0223531 60.938 64 25 0 1 64 355 418 2.78e-17 84.7
Msa1268400 MtrunA17_Chr4g0009011 44.771 306 99 5 156 405 1 292 7.28e-75 238
Msa1268400 MtrunA17_Chr8g0352211 40.407 344 161 8 64 406 634 934 1.28e-65 228
Msa1268400 MtrunA17_Chr8g0352211 49.351 77 35 1 1 77 357 429 4.19e-15 78.2
Msa1268400 MtrunA17_Chr6g0454861 68.750 112 33 1 323 434 1 110 8.42e-44 149
Msa1268400 MtrunA17_Chr4g0005601 75.269 93 23 0 58 150 65 157 6.37e-43 149
Msa1268400 MtrunA17_Chr3g0135571 52.288 153 50 1 305 434 26 178 1.02e-42 148
Msa1268400 MtrunA17_Chr3g0135541 52.288 153 50 1 305 434 178 330 4.11e-42 151
Msa1268400 MtrunA17_Chr3g0135511 51.634 153 51 1 305 434 26 178 9.71e-42 145
Msa1268400 MtrunA17_Chr8g0338811 61.111 108 42 0 92 199 1 108 8.97e-40 138
Msa1268400 MtrunA17_Chr4g0014821 50.000 148 50 2 302 426 19 165 6.78e-37 133
Msa1268400 MtrunA17_Chr6g0454931 71.591 88 23 1 57 142 680 767 8.61e-32 128
Msa1268400 MtrunA17_Chr6g0454931 67.692 65 21 0 1 65 412 476 7.52e-24 104
Msa1268400 MtrunA17_Chr4g0008981 57.609 92 38 1 315 405 1 92 1.50e-29 112
Msa1268400 MtrunA17_Chr4g0009211 55.000 100 41 2 315 410 1 100 1.29e-27 107
Msa1268400 MtrunA17_Chr8g0343791 44.444 153 79 3 155 303 2 152 1.70e-27 107
Msa1268400 MtrunA17_Chr3g0085531 30.180 222 113 4 249 434 9 224 8.33e-27 110
Msa1268400 MtrunA17_Chr3g0114381 29.391 279 145 6 206 434 1 277 1.07e-26 108
Msa1268400 MtrunA17_Chr8g0338931 38.931 131 73 2 305 434 40 164 3.20e-24 101
Msa1268400 MtrunA17_Chr6g0454901 64.615 65 23 0 1 65 156 220 2.25e-22 99.0
Msa1268400 MtrunA17_Chr8g0343781 48.052 77 40 0 323 399 5 81 7.72e-22 89.4
Msa1268400 MtrunA17_Chr8g0338801 42.574 101 56 2 305 403 100 200 1.19e-21 95.5
Msa1268400 MtrunA17_Chr7g0248521 47.458 118 61 1 61 178 625 741 5.88e-21 95.9
Msa1268400 MtrunA17_Chr7g0248521 49.206 63 32 0 3 65 353 415 1.53e-11 66.6
Msa1268400 MtrunA17_Chr4g0010681 58.209 67 28 0 1 67 4 70 6.12e-21 86.7
Msa1268400 MtrunA17_Chr7g0248121 45.763 118 63 1 61 178 626 742 1.76e-20 94.7
Msa1268400 MtrunA17_Chr7g0248121 32.178 202 110 6 58 255 693 871 6.12e-12 68.2
Msa1268400 MtrunA17_Chr7g0248121 47.619 63 33 0 3 65 354 416 9.72e-11 64.3
Msa1268400 MtrunA17_Chr7g0248201 47.368 114 59 1 63 176 17 129 2.34e-20 89.4
Msa1268400 MtrunA17_Chr7g0256881 40.476 126 68 2 61 186 617 735 3.10e-20 94.0
Msa1268400 MtrunA17_Chr7g0256881 36.301 146 91 2 58 202 684 828 4.34e-14 74.7
Msa1268400 MtrunA17_Chr3g0085541 63.077 65 24 0 1 65 358 422 7.30e-19 89.4
Msa1268400 MtrunA17_Chr3g0085541 54.545 77 33 1 61 137 632 706 3.65e-18 87.0
Msa1268400 MtrunA17_Chr4g0009021 61.194 67 26 0 1 67 18 84 9.48e-19 82.8
Msa1268400 MtrunA17_Chr4g0009351 62.687 67 25 0 1 67 257 323 1.13e-18 87.4
Msa1268400 MtrunA17_Chr3g0114401 60.000 65 26 0 1 65 226 290 1.81e-18 87.8
Msa1268400 MtrunA17_Chr7g0248511 46.552 116 61 1 61 176 632 746 2.58e-18 87.8
Msa1268400 MtrunA17_Chr7g0248511 49.206 63 32 0 3 65 360 422 1.01e-11 67.4
Msa1268400 MtrunA17_Chr7g0248511 33.146 178 105 6 58 228 699 869 3.67e-11 65.5
Msa1268400 MtrunA17_Chr5g0430531 53.247 77 33 1 1 77 348 421 2.70e-18 86.7
Msa1268400 MtrunA17_Chr8g0348541 45.690 116 62 1 61 176 631 745 1.25e-17 85.9
Msa1268400 MtrunA17_Chr7g0234891 58.824 68 27 1 1 67 265 332 1.50e-17 84.0
Msa1268400 MtrunA17_Chr6g0454881 58.065 62 26 0 344 405 1 62 1.53e-17 77.4
Msa1268400 MtrunA17_Chr2g0296461 55.385 65 29 0 1 65 132 196 2.34e-17 81.3
Msa1268400 MtrunA17_Chr4g0041441 49.438 89 43 1 57 143 608 696 3.06e-17 84.7
Msa1268400 MtrunA17_Chr6g0478451 41.593 113 64 1 64 176 620 730 1.08e-16 82.8
Msa1268400 MtrunA17_Chr8g0343801 55.385 65 29 0 1 65 350 414 3.25e-16 80.9
Msa1268400 MtrunA17_Chr8g0354681 30.814 172 104 2 5 176 589 745 4.43e-16 80.9
Msa1268400 MtrunA17_Chr8g0338851 53.846 65 30 0 1 65 248 312 5.93e-16 79.7
Msa1268400 MtrunA17_Chr8g0368251 26.239 343 195 12 33 334 577 902 9.06e-16 80.1
Msa1268400 MtrunA17_Chr8g0363851 38.168 131 79 1 62 190 463 593 5.01e-15 77.8
Msa1268400 MtrunA17_Chr8g0363851 38.462 91 54 2 5 94 172 261 5.47e-11 65.1
Msa1268400 MtrunA17_Chr8g0353371 37.607 117 71 1 60 176 639 753 1.17e-14 76.6
Msa1268400 MtrunA17_Chr4g0041241 38.462 104 61 2 43 143 607 710 1.30e-14 76.3
Msa1268400 MtrunA17_Chr6g0485991 43.820 89 48 1 57 143 621 709 1.31e-14 76.3
Msa1268400 MtrunA17_Chr6g0480051 32.759 174 89 3 29 176 332 503 1.71e-14 75.9
Msa1268400 MtrunA17_Chr4g0041611 31.674 221 126 7 58 261 630 842 2.16e-14 75.9
Msa1268400 MtrunA17_Chr6g0480321 35.714 154 81 5 34 176 436 582 3.07e-14 75.1
Msa1268400 MtrunA17_Chr6g0479821 36.975 119 73 1 58 176 618 734 3.33e-14 75.1
Msa1268400 MtrunA17_Chr4g0041431 40.449 89 51 1 57 143 439 527 3.36e-14 75.1
Msa1268400 MtrunA17_Chr4g0006771 29.353 201 110 5 29 202 555 750 4.29e-14 74.7
Msa1268400 MtrunA17_Chr6g0486221 44.944 89 47 1 57 143 626 714 4.90e-14 74.7
Msa1268400 MtrunA17_Chr1g0146421 31.319 182 105 5 21 187 556 732 5.48e-14 74.3
Msa1268400 MtrunA17_Chr6g0479671 34.375 128 82 1 60 187 612 737 5.85e-14 74.3
Msa1268400 MtrunA17_Chr8g0354701 37.168 113 69 1 64 176 632 742 6.51e-14 74.3
Msa1268400 MtrunA17_Chr8g0354711 28.070 171 108 2 6 176 582 737 1.11e-13 73.6
Msa1268400 MtrunA17_Chr6g0482111 32.308 130 87 1 60 189 624 752 1.47e-13 73.2
Msa1268400 MtrunA17_Chr6g0451551 39.823 113 66 1 64 176 777 887 2.02e-13 72.8
Msa1268400 MtrunA17_Chr6g0482511 32.164 171 105 3 6 176 610 769 2.25e-13 72.4
Msa1268400 MtrunA17_Chr8g0350801 33.566 143 81 4 56 194 636 768 2.36e-13 72.4
Msa1268400 MtrunA17_Chr6g0486481 42.697 89 49 1 57 143 621 709 2.53e-13 72.4
Msa1268400 MtrunA17_Chr4g0042011 43.750 80 45 0 64 143 634 713 2.72e-13 72.4
Msa1268400 MtrunA17_Chr6g0486521 43.820 89 47 2 57 143 629 716 3.82e-13 71.6
Msa1268400 MtrunA17_Chr6g0480421 32.044 181 105 6 34 203 440 613 4.01e-13 71.6
Msa1268400 MtrunA17_Chr2g0299561 41.304 92 52 1 57 146 619 710 5.16e-13 71.2
Msa1268400 MtrunA17_Chr6g0480311 35.897 117 72 2 60 176 601 714 6.17e-13 71.2
Msa1268400 MtrunA17_Chr6g0486361 45.000 80 44 0 64 143 627 706 7.10e-13 70.9
Msa1268400 MtrunA17_Chr6g0486731 42.697 89 49 1 57 143 621 709 7.12e-13 70.9
Msa1268400 MtrunA17_Chr6g0479651 38.028 142 83 3 61 202 622 758 7.39e-13 70.9
Msa1268400 MtrunA17_Chr6g0486301 41.573 89 50 1 57 143 618 706 1.60e-12 69.7
Msa1268400 MtrunA17_Chr6g0481011 35.398 113 71 1 64 176 645 755 1.75e-12 69.7
Msa1268400 MtrunA17_Chr6g0482351 37.069 116 69 3 60 174 1082 1194 2.22e-12 69.3
Msa1268400 MtrunA17_Chr6g0482351 37.736 106 54 3 33 126 606 711 4.96e-11 65.1
Msa1268400 MtrunA17_Chr6g0480041 38.136 118 70 2 60 176 629 744 2.43e-12 69.3
Msa1268400 MtrunA17_Chr4g0025831 34.188 117 75 1 60 176 610 724 2.85e-12 68.9
Msa1268400 MtrunA17_Chr2g0299811 31.944 144 95 2 61 204 470 610 3.90e-12 68.6
Msa1268400 MtrunA17_Chr3g0081531 31.783 129 87 1 61 189 615 742 4.65e-12 68.6
Msa1268400 MtrunA17_Chr3g0119601 50.769 65 32 0 1 65 347 411 6.36e-12 67.8
Msa1268400 MtrunA17_Chr3g0119601 28.358 201 86 4 63 216 624 813 7.32e-12 67.8
Msa1268400 MtrunA17_Chr6g0480151 29.268 164 113 2 14 176 560 721 7.45e-12 67.4
Msa1268400 MtrunA17_Chr6g0479001 31.624 117 78 1 60 176 597 711 8.20e-12 67.4
Msa1268400 MtrunA17_Chr2g0299881 32.759 116 77 1 61 176 627 741 1.11e-11 67.4
Msa1268400 MtrunA17_Chr4g0025771 34.188 117 75 1 60 176 68 182 1.19e-11 66.6
Msa1268400 MtrunA17_Chr6g0486311 40.449 89 51 1 57 143 619 707 1.22e-11 67.0
Msa1268400 MtrunA17_Chr2g0330121 32.418 182 107 5 6 187 407 572 1.24e-11 67.0
Msa1268400 MtrunA17_Chr4g0025811 35.897 117 73 1 60 176 606 720 1.31e-11 67.0
Msa1268400 MtrunA17_Chr8g0363891 40.708 113 67 0 66 178 2 114 1.34e-11 66.6
Msa1268400 MtrunA17_Chr2g0300251 29.078 141 96 2 60 198 617 755 1.47e-11 66.6
Msa1268400 MtrunA17_Chr6g0479761 37.288 118 71 2 60 176 471 586 1.48e-11 66.6
Msa1268400 MtrunA17_Chr6g0484161 34.375 128 82 1 60 187 633 758 1.56e-11 66.6
Msa1268400 MtrunA17_Chr4g0041941 42.045 88 51 0 56 143 614 701 1.81e-11 66.6
Msa1268400 MtrunA17_Chr4g0010521 30.303 132 91 1 61 192 616 746 2.26e-11 66.2
Msa1268400 MtrunA17_Chr8g0354721 33.628 113 73 1 64 176 631 741 2.51e-11 66.2
Msa1268400 MtrunA17_Chr6g0480521 35.043 117 74 1 60 176 611 725 3.03e-11 65.9
Msa1268400 MtrunA17_Chr5g0415831 33.628 113 73 1 64 176 1 111 3.04e-11 65.1
Msa1268400 MtrunA17_Chr6g0479731 35.043 117 74 1 60 176 605 719 3.11e-11 65.5
Msa1268400 MtrunA17_Chr2g0299921 33.621 116 76 1 61 176 621 735 3.25e-11 65.9
Msa1268400 MtrunA17_Chr4g0041951 38.202 89 53 1 57 143 669 757 3.98e-11 65.5
Msa1268400 MtrunA17_Chr6g0478771 29.412 136 94 1 64 199 602 735 4.61e-11 65.1
Msa1268400 MtrunA17_Chr6g0481141 34.483 116 74 1 61 176 665 778 4.62e-11 65.1
Msa1268400 MtrunA17_Chr2g0299851 33.621 116 76 1 61 176 622 736 4.66e-11 65.1
Msa1268400 MtrunA17_Chr3g0084731 33.043 115 75 2 1 115 353 465 5.49e-11 65.1
Msa1268400 MtrunA17_Chr6g0482471 37.736 106 54 3 33 126 785 890 6.68e-11 64.7
Msa1268400 MtrunA17_Chr6g0480461 34.513 113 72 1 64 176 662 772 6.82e-11 64.7
Msa1268400 MtrunA17_Chr6g0480911 33.333 117 76 1 60 176 637 751 7.75e-11 64.3
Msa1268400 MtrunA17_Chr6g0486271 41.975 81 45 1 57 135 617 697 8.30e-11 64.3
Msa1268400 MtrunA17_Chr6g0479621 34.188 117 75 1 60 176 609 723 9.07e-11 64.3
Msa1268400 MtrunA17_Chr4g0041981 41.026 78 46 0 61 138 139 216 9.09e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1268400 AT5G36930.4 44.776 134 73 1 64 196 622 755 1.43e-26 113
Msa1268400 AT5G36930.4 50.769 65 32 0 1 65 344 408 4.98e-14 75.1
Msa1268400 AT5G36930.1 44.776 134 73 1 64 196 622 755 1.43e-26 113
Msa1268400 AT5G36930.1 50.769 65 32 0 1 65 344 408 4.98e-14 75.1
Msa1268400 AT5G36930.2 44.776 134 73 1 64 196 625 758 1.50e-26 113
Msa1268400 AT5G36930.2 50.769 65 32 0 1 65 347 411 5.16e-14 75.1
Msa1268400 AT5G36930.3 44.776 134 73 1 64 196 622 755 1.73e-26 113
Msa1268400 AT5G36930.3 50.769 65 32 0 1 65 344 408 5.44e-14 74.7
Msa1268400 AT1G27180.1 37.302 126 79 0 62 187 843 968 3.07e-16 82.0
Msa1268400 AT1G27180.5 37.302 126 79 0 62 187 679 804 3.54e-16 81.6
Msa1268400 AT1G27180.8 37.302 126 79 0 62 187 679 804 3.54e-16 81.6
Msa1268400 AT1G27180.2 37.302 126 79 0 62 187 681 806 3.94e-16 81.6
Msa1268400 AT1G27180.3 37.302 126 79 0 62 187 681 806 4.26e-16 81.3
Msa1268400 AT1G27180.7 37.302 126 79 0 62 187 505 630 4.78e-16 81.3
Msa1268400 AT1G27180.6 37.302 126 79 0 62 187 505 630 4.78e-16 81.3
Msa1268400 AT1G27180.4 37.302 126 79 0 62 187 505 630 4.78e-16 81.3
Msa1268400 AT4G12010.1 39.370 127 67 3 64 187 645 764 1.95e-14 76.3
Msa1268400 AT1G27170.1 35.507 138 87 1 52 187 658 795 7.57e-14 74.3
Msa1268400 AT1G27170.2 35.507 138 87 1 52 187 658 795 7.70e-14 74.3
Msa1268400 AT5G38350.1 40.909 110 61 2 64 173 480 585 7.91e-13 71.2
Msa1268400 AT5G45200.1 35.338 133 65 2 61 173 708 839 9.02e-13 71.2
Msa1268400 AT5G45200.2 35.338 133 65 2 61 173 464 595 1.12e-12 70.9
Msa1268400 AT5G45200.3 35.338 133 65 2 61 173 708 839 1.52e-12 70.1
Msa1268400 AT2G16870.1 26.277 274 173 5 61 333 622 867 1.00e-11 67.8
Msa1268400 AT2G16870.3 26.277 274 173 5 61 333 348 593 1.10e-11 67.4
Msa1268400 AT2G16870.2 26.277 274 173 5 61 333 348 593 1.10e-11 67.4
Msa1268400 AT4G19510.10 40.541 111 61 3 62 172 631 736 1.28e-11 67.4
Msa1268400 AT4G19510.2 40.541 111 61 3 62 172 631 736 1.29e-11 67.4
Msa1268400 AT4G19510.3 40.541 111 61 3 62 172 671 776 1.38e-11 67.0
Msa1268400 AT4G19510.9 40.541 111 61 3 62 172 644 749 1.68e-11 67.0
Msa1268400 AT4G19510.8 40.541 111 61 3 62 172 634 739 1.70e-11 67.0
Msa1268400 AT4G19510.1 40.541 111 61 3 62 172 634 739 1.70e-11 67.0
Msa1268400 AT4G19510.6 40.541 111 61 3 62 172 644 749 1.84e-11 67.0
Msa1268400 AT4G19510.5 40.541 111 61 3 62 172 671 776 1.95e-11 67.0
Msa1268400 AT4G19510.4 40.541 111 61 3 62 172 671 776 1.95e-11 67.0
Msa1268400 AT4G19510.7 40.541 111 61 3 62 172 671 776 1.95e-11 67.0
Msa1268400 AT4G19500.1 37.190 121 72 2 56 176 1162 1278 2.53e-11 66.6
Msa1268400 AT2G17060.2 39.200 125 73 2 60 184 748 869 3.15e-11 66.2
Msa1268400 AT2G17060.1 39.200 125 73 2 60 184 748 869 3.16e-11 66.2
Msa1268400 AT4G19500.2 37.190 121 72 2 56 176 639 755 3.33e-11 65.9
Msa1268400 AT5G44870.1 33.099 142 86 4 38 173 740 878 7.14e-11 65.1
Msa1268400 AT1G63750.3 25.000 240 154 5 45 284 614 827 9.53e-11 64.7

Find 79 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATCTGATGTTGTGTTATC+TGG 0.165526 8_3:-1406755 None:intergenic
TCAAGATGTGACAACCATTT+TGG 0.168483 8_3:+1406202 Msa1268400:CDS
TGCAGTCAAGTGCATGTTTC+AGG 0.185399 8_3:+1406308 Msa1268400:CDS
CTAAAATCTCTCATTCTTTC+CGG 0.204571 8_3:+1405819 Msa1268400:CDS
TTTGACCTTACTAATGAAAA+TGG 0.241485 8_3:-1405933 None:intergenic
TTCAACTTGTATATACTTCT+TGG 0.249115 8_3:-1405792 None:intergenic
TCGAAGACCTGGAAGGTTCT+TGG 0.305640 8_3:-1406141 None:intergenic
ATCATATATGAGATAAACTA+TGG 0.308774 8_3:-1406951 None:intergenic
GGCATACAAGGCATCCAAAA+TGG 0.345989 8_3:-1406216 None:intergenic
TAAAATCTCTCATTCTTTCC+GGG 0.374649 8_3:+1405820 Msa1268400:CDS
TTAGAGATTTCGCATACTAT+AGG 0.374988 8_3:+1405711 Msa1268400:CDS
ATCTTGAGAAAATCTAAGTT+TGG 0.378654 8_3:-1406186 None:intergenic
TTAGGCAAGTTTGAAAAGTC+TGG 0.392033 8_3:-1405651 None:intergenic
TGCCTTGTATGCCAAGGAAT+TGG 0.405906 8_3:+1406226 Msa1268400:CDS
TCAATATCCAAGAACCTTCC+AGG 0.406907 8_3:+1406134 Msa1268400:CDS
ATCCAAGACTGAATGATAGA+TGG 0.413984 8_3:-1406011 None:intergenic
AAAATGTAGTTGAGTATTCT+GGG 0.414551 8_3:+1405289 Msa1268400:CDS
TTCCAATTCCTTGGCATACA+AGG 0.419393 8_3:-1406228 None:intergenic
TGCAGCTGATTCCAATTCCT+TGG 0.424713 8_3:-1406237 None:intergenic
TTGAGGAACTTTAAAAGTTA+CGG 0.424943 8_3:-1406681 None:intergenic
TTCGATCATATTTGTTTGAA+AGG 0.427434 8_3:+1405337 Msa1268400:CDS
TGGAAGATTGTATTAGCCTT+CGG 0.428759 8_3:+1405763 Msa1268400:CDS
AGTTTGTGGGAACTACTATA+TGG 0.430491 8_3:-1406107 None:intergenic
ATTTCTTTGTGCAGCTATGA+AGG 0.433167 8_3:+1405969 Msa1268400:CDS
ATGAAAATGAACCTGTTGTT+AGG 0.434005 8_3:+1406972 Msa1268400:CDS
CATCTGATGTTGTGTTATCT+GGG 0.449465 8_3:-1406754 None:intergenic
TTCCATCTATCATTCAGTCT+TGG 0.451033 8_3:+1406009 Msa1268400:CDS
GCGTTCAAGCAACCGAGTCC+TGG 0.457006 8_3:+1405243 Msa1268400:CDS
TCGATCATATTTGTTTGAAA+GGG 0.457331 8_3:+1405338 Msa1268400:CDS
TAGTGGTAGATGTTTGAAAT+GGG 0.459853 8_3:-1406058 None:intergenic
CGAAGTCTTTGTGTGGAGTA+CGG 0.461922 8_3:+1406161 Msa1268400:CDS
GGGGACTGAAAATTATTTGT+TGG 0.466397 8_3:-1406038 None:intergenic
TTTAATGATTGACAAGTTGG+AGG 0.486269 8_3:+1405845 Msa1268400:CDS
TTCTTTCTTGTAGAGATGAA+TGG 0.492016 8_3:-1406816 None:intergenic
GGATATTGATGCTAGTTTGT+GGG 0.501750 8_3:-1406120 None:intergenic
ATAGTGGTAGATGTTTGAAA+TGG 0.502214 8_3:-1406059 None:intergenic
GTGTTTAATGATTGACAAGT+TGG 0.504099 8_3:+1405842 Msa1268400:CDS
AAGTTTCGCCCTTCCACTTG+AGG 0.504998 8_3:-1406698 None:intergenic
GGAGAGGTCCTCCTAACAAC+AGG 0.509078 8_3:-1406983 None:intergenic
TTTAAAGTTCCTCAAGTGGA+AGG 0.525960 8_3:+1406689 Msa1268400:CDS
TGGATATTGATGCTAGTTTG+TGG 0.533202 8_3:-1406121 None:intergenic
ACCACCTCCACTTTGTTACC+AGG 0.533251 8_3:-1406893 None:intergenic
ACTTGTATATACTTCTTGGA+AGG 0.536811 8_3:-1405788 None:intergenic
ACAAAATCTTCTCCAGGACT+CGG 0.542574 8_3:-1405255 None:intergenic
AATGATTGACAAGTTGGAGG+AGG 0.544873 8_3:+1405848 Msa1268400:CDS
ATCATATTTGTTTGAAAGGG+GGG 0.546029 8_3:+1405341 Msa1268400:CDS
CGATCATATTTGTTTGAAAG+GGG 0.547510 8_3:+1405339 Msa1268400:CDS
ACACAAAGACTTCGAAGACC+TGG 0.549021 8_3:-1406152 None:intergenic
TCATATGTGGGCTCCACTTG+AGG 0.550903 8_3:-1407004 None:intergenic
TACTTCTTGGAAGGCTCCGA+AGG 0.560309 8_3:-1405779 None:intergenic
TTTGGATGCCTTGTATGCCA+AGG 0.562454 8_3:+1406220 Msa1268400:CDS
CTTGTCAATCATTAAACACC+CGG 0.562910 8_3:-1405838 None:intergenic
CCAGATAACACAACATCAGA+TGG 0.563740 8_3:+1406755 Msa1268400:CDS
ACCTGGTAACAAAGTGGAGG+TGG 0.564433 8_3:+1406892 Msa1268400:CDS
ATTCCCACAAAATCTTCTCC+AGG 0.566941 8_3:-1405261 None:intergenic
TTAAAGTTCCTCAAGTGGAA+GGG 0.571654 8_3:+1406690 Msa1268400:CDS
AGTGGAGCCCACATATGACT+TGG 0.572171 8_3:+1407009 Msa1268400:CDS
AGGTCTTCGAAGTCTTTGTG+TGG 0.578274 8_3:+1406154 Msa1268400:CDS
TTCCAATACACATTTCCACT+CGG 0.583358 8_3:-1405367 None:intergenic
GATCATATTTGTTTGAAAGG+GGG 0.586103 8_3:+1405340 Msa1268400:CDS
GGAACTTTAAAAGTTACGGA+AGG 0.595312 8_3:-1406677 None:intergenic
TAGGAGGACCTCTCCTCAAG+TGG 0.596198 8_3:+1406991 Msa1268400:CDS
ATCTGATGTTGTGTTATCTG+GGG 0.602942 8_3:-1406753 None:intergenic
AAAATGAACCTGTTGTTAGG+AGG 0.606690 8_3:+1406975 Msa1268400:CDS
CGAAGAACTTCTAGAGCTAG+CGG 0.619934 8_3:-1405318 None:intergenic
TATAGCACCTGGTAACAAAG+TGG 0.620153 8_3:+1406886 Msa1268400:CDS
TGTGGGCTCCACTTGAGGAG+AGG 0.628621 8_3:-1406999 None:intergenic
AGAAACTAGAGATGACATAG+TGG 0.636143 8_3:-1406075 None:intergenic
AATGTAGTTGAGTATTCTGG+GGG 0.636376 8_3:+1405291 Msa1268400:CDS
TGCGAAATCTCTAACAACCT+CGG 0.638438 8_3:-1405702 None:intergenic
AAATGTAGTTGAGTATTCTG+GGG 0.638618 8_3:+1405290 Msa1268400:CDS
ATTGTATCAAATATAGCACC+TGG 0.639343 8_3:+1406875 Msa1268400:CDS
TGGTAACAAAGTGGAGGTGG+TGG 0.649946 8_3:+1406895 Msa1268400:CDS
AGTGGTAGATGTTTGAAATG+GGG 0.664683 8_3:-1406057 None:intergenic
TAGTACTCAAAGATTGTCCG+AGG 0.667956 8_3:+1405685 Msa1268400:CDS
AGCACCTGGTAACAAAGTGG+AGG 0.685797 8_3:+1406889 Msa1268400:CDS
AGTGTTATTTGCAAGCAGAG+TGG 0.686692 8_3:-1405895 None:intergenic
AAAGACTTCGAAGACCTGGA+AGG 0.690281 8_3:-1406148 None:intergenic
TTTGTGTCAGATGATGAGAG+TGG 0.760329 8_3:-1405626 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGAATTACTATTTTATTATT+TGG + chr8_3:1405525-1405544 Msa1268400:intron 10.0%
!!! TGAATTACTATTTTATTATT+TGG + chr8_3:1405525-1405544 Msa1268400:intron 10.0%
!! TAAAATAGTAATTCAATTTG+AGG - chr8_3:1405520-1405539 None:intergenic 15.0%
!!! TAAAGTTCTTTTGATAAATT+TGG + chr8_3:1405743-1405762 Msa1268400:CDS 15.0%
!! TAAAATAGTAATTCAATTTG+AGG - chr8_3:1405520-1405539 None:intergenic 15.0%
!!! TAAAGTTCTTTTGATAAATT+TGG + chr8_3:1405743-1405762 Msa1268400:CDS 15.0%
!!! AATTTTATAGAGAAAGCTTA+GGG - chr8_3:1405561-1405580 None:intergenic 20.0%
!!! AAATTTTATAGAGAAAGCTT+AGG - chr8_3:1405562-1405581 None:intergenic 20.0%
!! AAGTCTCTATTAATTCAAAT+GGG + chr8_3:1406347-1406366 Msa1268400:intron 20.0%
!! ATCATATATGAGATAAACTA+TGG - chr8_3:1406954-1406973 None:intergenic 20.0%
!!! AATTTTATAGAGAAAGCTTA+GGG - chr8_3:1405561-1405580 None:intergenic 20.0%
!!! AAATTTTATAGAGAAAGCTT+AGG - chr8_3:1405562-1405581 None:intergenic 20.0%
!! AAGTCTCTATTAATTCAAAT+GGG + chr8_3:1406347-1406366 Msa1268400:intron 20.0%
!! ATCATATATGAGATAAACTA+TGG - chr8_3:1406954-1406973 None:intergenic 20.0%
!! AGAATACTCAACTACATTTT+TGG - chr8_3:1405289-1405308 None:intergenic 25.0%
! AAAAATGTAGTTGAGTATTC+TGG + chr8_3:1405288-1405307 Msa1268400:CDS 25.0%
! AAAATGTAGTTGAGTATTCT+GGG + chr8_3:1405289-1405308 Msa1268400:CDS 25.0%
! TTCGATCATATTTGTTTGAA+AGG + chr8_3:1405337-1405356 Msa1268400:CDS 25.0%
! TCGATCATATTTGTTTGAAA+GGG + chr8_3:1405338-1405357 Msa1268400:CDS 25.0%
!! ATTTTATAGAGAAAGCTTAG+GGG - chr8_3:1405560-1405579 None:intergenic 25.0%
! TTCAACTTGTATATACTTCT+TGG - chr8_3:1405795-1405814 None:intergenic 25.0%
! TTTGACCTTACTAATGAAAA+TGG - chr8_3:1405936-1405955 None:intergenic 25.0%
! ATCTTGAGAAAATCTAAGTT+TGG - chr8_3:1406189-1406208 None:intergenic 25.0%
! TTGAATTAATAGAGACTTCA+TGG - chr8_3:1406345-1406364 None:intergenic 25.0%
! GAAGTCTCTATTAATTCAAA+TGG + chr8_3:1406346-1406365 Msa1268400:intron 25.0%
!! CTTTCAGAGTATTAGTTAAT+TGG - chr8_3:1406382-1406401 None:intergenic 25.0%
!! TCTGAAAGAGAAAATTTTAC+AGG + chr8_3:1406394-1406413 Msa1268400:intron 25.0%
! TTACAGAATCTAGATATCAA+CGG + chr8_3:1406590-1406609 Msa1268400:intron 25.0%
!! TTGAGGAACTTTAAAAGTTA+CGG - chr8_3:1406684-1406703 None:intergenic 25.0%
!!! ATTAACCTCTTTTGAAAATG+AGG + chr8_3:1406841-1406860 Msa1268400:CDS 25.0%
! TAAAAAGAAGAAAATTCGTG+TGG + chr8_3:1407039-1407058 Msa1268400:CDS 25.0%
!! AGAATACTCAACTACATTTT+TGG - chr8_3:1405289-1405308 None:intergenic 25.0%
! AAAAATGTAGTTGAGTATTC+TGG + chr8_3:1405288-1405307 Msa1268400:CDS 25.0%
! AAAATGTAGTTGAGTATTCT+GGG + chr8_3:1405289-1405308 Msa1268400:CDS 25.0%
! TTCGATCATATTTGTTTGAA+AGG + chr8_3:1405337-1405356 Msa1268400:CDS 25.0%
! TCGATCATATTTGTTTGAAA+GGG + chr8_3:1405338-1405357 Msa1268400:CDS 25.0%
!! ATTTTATAGAGAAAGCTTAG+GGG - chr8_3:1405560-1405579 None:intergenic 25.0%
! TTCAACTTGTATATACTTCT+TGG - chr8_3:1405795-1405814 None:intergenic 25.0%
! TTTGACCTTACTAATGAAAA+TGG - chr8_3:1405936-1405955 None:intergenic 25.0%
! ATCTTGAGAAAATCTAAGTT+TGG - chr8_3:1406189-1406208 None:intergenic 25.0%
! TTGAATTAATAGAGACTTCA+TGG - chr8_3:1406345-1406364 None:intergenic 25.0%
! GAAGTCTCTATTAATTCAAA+TGG + chr8_3:1406346-1406365 Msa1268400:intron 25.0%
!! CTTTCAGAGTATTAGTTAAT+TGG - chr8_3:1406382-1406401 None:intergenic 25.0%
!! TCTGAAAGAGAAAATTTTAC+AGG + chr8_3:1406394-1406413 Msa1268400:intron 25.0%
! TTACAGAATCTAGATATCAA+CGG + chr8_3:1406590-1406609 Msa1268400:intron 25.0%
!! TTGAGGAACTTTAAAAGTTA+CGG - chr8_3:1406684-1406703 None:intergenic 25.0%
!!! ATTAACCTCTTTTGAAAATG+AGG + chr8_3:1406841-1406860 Msa1268400:CDS 25.0%
! TAAAAAGAAGAAAATTCGTG+TGG + chr8_3:1407039-1407058 Msa1268400:CDS 25.0%
!! AATCACTAGAGCTTTTTAGT+TGG + chr8_3:1405217-1405236 Msa1268400:CDS 30.0%
AAATGTAGTTGAGTATTCTG+GGG + chr8_3:1405290-1405309 Msa1268400:CDS 30.0%
CGATCATATTTGTTTGAAAG+GGG + chr8_3:1405339-1405358 Msa1268400:CDS 30.0%
GATCATATTTGTTTGAAAGG+GGG + chr8_3:1405340-1405359 Msa1268400:CDS 30.0%
ATCATATTTGTTTGAAAGGG+GGG + chr8_3:1405341-1405360 Msa1268400:CDS 30.0%
ATTTATGTTCTTGCAGAAGA+TGG + chr8_3:1405578-1405597 Msa1268400:intron 30.0%
!!! AGTACTAGCTTTTCAAGATT+AGG - chr8_3:1405672-1405691 None:intergenic 30.0%
TTAGAGATTTCGCATACTAT+AGG + chr8_3:1405711-1405730 Msa1268400:CDS 30.0%
ACTTGTATATACTTCTTGGA+AGG - chr8_3:1405791-1405810 None:intergenic 30.0%
CTAAAATCTCTCATTCTTTC+CGG + chr8_3:1405819-1405838 Msa1268400:CDS 30.0%
TAAAATCTCTCATTCTTTCC+GGG + chr8_3:1405820-1405839 Msa1268400:CDS 30.0%
GTGTTTAATGATTGACAAGT+TGG + chr8_3:1405842-1405861 Msa1268400:CDS 30.0%
! TTTAATGATTGACAAGTTGG+AGG + chr8_3:1405845-1405864 Msa1268400:CDS 30.0%
! GAGTACCATTTTCATTAGTA+AGG + chr8_3:1405928-1405947 Msa1268400:CDS 30.0%
! TTAGTAAGGTCAAAAAGCAT+TGG + chr8_3:1405942-1405961 Msa1268400:CDS 30.0%
! TAGTGGTAGATGTTTGAAAT+GGG - chr8_3:1406061-1406080 None:intergenic 30.0%
ATAGTGGTAGATGTTTGAAA+TGG - chr8_3:1406062-1406081 None:intergenic 30.0%
CAACTGAAAGTTAACCAATT+TGG - chr8_3:1406650-1406669 None:intergenic 30.0%
!!! AACTTTTAAAGTTCCTCAAG+TGG + chr8_3:1406685-1406704 Msa1268400:CDS 30.0%
!! AGATGGACTAAAAAATCTGT+TGG + chr8_3:1406772-1406791 Msa1268400:CDS 30.0%
TTCTTTCTTGTAGAGATGAA+TGG - chr8_3:1406819-1406838 None:intergenic 30.0%
ATTGTATCAAATATAGCACC+TGG + chr8_3:1406875-1406894 Msa1268400:CDS 30.0%
ATGAAAATGAACCTGTTGTT+AGG + chr8_3:1406972-1406991 Msa1268400:CDS 30.0%
! TTTTCTTCCAAGTCATATGT+GGG - chr8_3:1407019-1407038 None:intergenic 30.0%
! ATTTTCTTCCAAGTCATATG+TGG - chr8_3:1407020-1407039 None:intergenic 30.0%
!! AATCACTAGAGCTTTTTAGT+TGG + chr8_3:1405217-1405236 Msa1268400:CDS 30.0%
AAATGTAGTTGAGTATTCTG+GGG + chr8_3:1405290-1405309 Msa1268400:CDS 30.0%
CGATCATATTTGTTTGAAAG+GGG + chr8_3:1405339-1405358 Msa1268400:CDS 30.0%
GATCATATTTGTTTGAAAGG+GGG + chr8_3:1405340-1405359 Msa1268400:CDS 30.0%
ATCATATTTGTTTGAAAGGG+GGG + chr8_3:1405341-1405360 Msa1268400:CDS 30.0%
ATTTATGTTCTTGCAGAAGA+TGG + chr8_3:1405578-1405597 Msa1268400:intron 30.0%
!!! AGTACTAGCTTTTCAAGATT+AGG - chr8_3:1405672-1405691 None:intergenic 30.0%
TTAGAGATTTCGCATACTAT+AGG + chr8_3:1405711-1405730 Msa1268400:CDS 30.0%
ACTTGTATATACTTCTTGGA+AGG - chr8_3:1405791-1405810 None:intergenic 30.0%
CTAAAATCTCTCATTCTTTC+CGG + chr8_3:1405819-1405838 Msa1268400:CDS 30.0%
TAAAATCTCTCATTCTTTCC+GGG + chr8_3:1405820-1405839 Msa1268400:CDS 30.0%
GTGTTTAATGATTGACAAGT+TGG + chr8_3:1405842-1405861 Msa1268400:CDS 30.0%
! TTTAATGATTGACAAGTTGG+AGG + chr8_3:1405845-1405864 Msa1268400:CDS 30.0%
! GAGTACCATTTTCATTAGTA+AGG + chr8_3:1405928-1405947 Msa1268400:CDS 30.0%
! TTAGTAAGGTCAAAAAGCAT+TGG + chr8_3:1405942-1405961 Msa1268400:CDS 30.0%
! TAGTGGTAGATGTTTGAAAT+GGG - chr8_3:1406061-1406080 None:intergenic 30.0%
ATAGTGGTAGATGTTTGAAA+TGG - chr8_3:1406062-1406081 None:intergenic 30.0%
CAACTGAAAGTTAACCAATT+TGG - chr8_3:1406650-1406669 None:intergenic 30.0%
!!! AACTTTTAAAGTTCCTCAAG+TGG + chr8_3:1406685-1406704 Msa1268400:CDS 30.0%
!! AGATGGACTAAAAAATCTGT+TGG + chr8_3:1406772-1406791 Msa1268400:CDS 30.0%
TTCTTTCTTGTAGAGATGAA+TGG - chr8_3:1406819-1406838 None:intergenic 30.0%
ATTGTATCAAATATAGCACC+TGG + chr8_3:1406875-1406894 Msa1268400:CDS 30.0%
ATGAAAATGAACCTGTTGTT+AGG + chr8_3:1406972-1406991 Msa1268400:CDS 30.0%
! TTTTCTTCCAAGTCATATGT+GGG - chr8_3:1407019-1407038 None:intergenic 30.0%
! ATTTTCTTCCAAGTCATATG+TGG - chr8_3:1407020-1407039 None:intergenic 30.0%
AATGTAGTTGAGTATTCTGG+GGG + chr8_3:1405291-1405310 Msa1268400:CDS 35.0%
TTCCAATACACATTTCCACT+CGG - chr8_3:1405370-1405389 None:intergenic 35.0%
TTAGGCAAGTTTGAAAAGTC+TGG - chr8_3:1405654-1405673 None:intergenic 35.0%
!! TGGAAGATTGTATTAGCCTT+CGG + chr8_3:1405763-1405782 Msa1268400:CDS 35.0%
CTTGTCAATCATTAAACACC+CGG - chr8_3:1405841-1405860 None:intergenic 35.0%
ATTTCTTTGTGCAGCTATGA+AGG + chr8_3:1405969-1405988 Msa1268400:CDS 35.0%
TTCCATCTATCATTCAGTCT+TGG + chr8_3:1406009-1406028 Msa1268400:CDS 35.0%
ATCCAAGACTGAATGATAGA+TGG - chr8_3:1406014-1406033 None:intergenic 35.0%
GGGGACTGAAAATTATTTGT+TGG - chr8_3:1406041-1406060 None:intergenic 35.0%
! AGTGGTAGATGTTTGAAATG+GGG - chr8_3:1406060-1406079 None:intergenic 35.0%
AGAAACTAGAGATGACATAG+TGG - chr8_3:1406078-1406097 None:intergenic 35.0%
AGTTTGTGGGAACTACTATA+TGG - chr8_3:1406110-1406129 None:intergenic 35.0%
! GGATATTGATGCTAGTTTGT+GGG - chr8_3:1406123-1406142 None:intergenic 35.0%
! TGGATATTGATGCTAGTTTG+TGG - chr8_3:1406124-1406143 None:intergenic 35.0%
! TCAAGATGTGACAACCATTT+TGG + chr8_3:1406202-1406221 Msa1268400:CDS 35.0%
AATTTGGATAACTACCACCA+AGG - chr8_3:1406634-1406653 None:intergenic 35.0%
! TTGGTGGTAGTTATCCAAAT+TGG + chr8_3:1406633-1406652 Msa1268400:intron 35.0%
! GGAACTTTAAAAGTTACGGA+AGG - chr8_3:1406680-1406699 None:intergenic 35.0%
! TTTAAAGTTCCTCAAGTGGA+AGG + chr8_3:1406689-1406708 Msa1268400:CDS 35.0%
TTAAAGTTCCTCAAGTGGAA+GGG + chr8_3:1406690-1406709 Msa1268400:CDS 35.0%
ATCTGATGTTGTGTTATCTG+GGG - chr8_3:1406756-1406775 None:intergenic 35.0%
CATCTGATGTTGTGTTATCT+GGG - chr8_3:1406757-1406776 None:intergenic 35.0%
AAAATGAACCTGTTGTTAGG+AGG + chr8_3:1406975-1406994 Msa1268400:CDS 35.0%
AATGTAGTTGAGTATTCTGG+GGG + chr8_3:1405291-1405310 Msa1268400:CDS 35.0%
TTCCAATACACATTTCCACT+CGG - chr8_3:1405370-1405389 None:intergenic 35.0%
TTAGGCAAGTTTGAAAAGTC+TGG - chr8_3:1405654-1405673 None:intergenic 35.0%
!! TGGAAGATTGTATTAGCCTT+CGG + chr8_3:1405763-1405782 Msa1268400:CDS 35.0%
CTTGTCAATCATTAAACACC+CGG - chr8_3:1405841-1405860 None:intergenic 35.0%
ATTTCTTTGTGCAGCTATGA+AGG + chr8_3:1405969-1405988 Msa1268400:CDS 35.0%
TTCCATCTATCATTCAGTCT+TGG + chr8_3:1406009-1406028 Msa1268400:CDS 35.0%
ATCCAAGACTGAATGATAGA+TGG - chr8_3:1406014-1406033 None:intergenic 35.0%
GGGGACTGAAAATTATTTGT+TGG - chr8_3:1406041-1406060 None:intergenic 35.0%
! AGTGGTAGATGTTTGAAATG+GGG - chr8_3:1406060-1406079 None:intergenic 35.0%
AGAAACTAGAGATGACATAG+TGG - chr8_3:1406078-1406097 None:intergenic 35.0%
AGTTTGTGGGAACTACTATA+TGG - chr8_3:1406110-1406129 None:intergenic 35.0%
! GGATATTGATGCTAGTTTGT+GGG - chr8_3:1406123-1406142 None:intergenic 35.0%
! TGGATATTGATGCTAGTTTG+TGG - chr8_3:1406124-1406143 None:intergenic 35.0%
! TCAAGATGTGACAACCATTT+TGG + chr8_3:1406202-1406221 Msa1268400:CDS 35.0%
AATTTGGATAACTACCACCA+AGG - chr8_3:1406634-1406653 None:intergenic 35.0%
! TTGGTGGTAGTTATCCAAAT+TGG + chr8_3:1406633-1406652 Msa1268400:intron 35.0%
! GGAACTTTAAAAGTTACGGA+AGG - chr8_3:1406680-1406699 None:intergenic 35.0%
! TTTAAAGTTCCTCAAGTGGA+AGG + chr8_3:1406689-1406708 Msa1268400:CDS 35.0%
TTAAAGTTCCTCAAGTGGAA+GGG + chr8_3:1406690-1406709 Msa1268400:CDS 35.0%
ATCTGATGTTGTGTTATCTG+GGG - chr8_3:1406756-1406775 None:intergenic 35.0%
CATCTGATGTTGTGTTATCT+GGG - chr8_3:1406757-1406776 None:intergenic 35.0%
AAAATGAACCTGTTGTTAGG+AGG + chr8_3:1406975-1406994 Msa1268400:CDS 35.0%
ACAAAATCTTCTCCAGGACT+CGG - chr8_3:1405258-1405277 None:intergenic 40.0%
! AGTCCTGGAGAAGATTTTGT+GGG + chr8_3:1405258-1405277 Msa1268400:CDS 40.0%
ATTCCCACAAAATCTTCTCC+AGG - chr8_3:1405264-1405283 None:intergenic 40.0%
TTTCCACACAACTTTGAGTG+GGG - chr8_3:1405407-1405426 None:intergenic 40.0%
CTTTCCACACAACTTTGAGT+GGG - chr8_3:1405408-1405427 None:intergenic 40.0%
TCTTTCCACACAACTTTGAG+TGG - chr8_3:1405409-1405428 None:intergenic 40.0%
AGTTGTGTGGAAAGAAACTC+AGG + chr8_3:1405414-1405433 Msa1268400:intron 40.0%
TTTGTGTCAGATGATGAGAG+TGG - chr8_3:1405629-1405648 None:intergenic 40.0%
TAGTACTCAAAGATTGTCCG+AGG + chr8_3:1405685-1405704 Msa1268400:CDS 40.0%
TGCGAAATCTCTAACAACCT+CGG - chr8_3:1405705-1405724 None:intergenic 40.0%
! AATGATTGACAAGTTGGAGG+AGG + chr8_3:1405848-1405867 Msa1268400:CDS 40.0%
!! AGTGTTATTTGCAAGCAGAG+TGG - chr8_3:1405898-1405917 None:intergenic 40.0%
TCAATATCCAAGAACCTTCC+AGG + chr8_3:1406134-1406153 Msa1268400:CDS 40.0%
TTCCAATTCCTTGGCATACA+AGG - chr8_3:1406231-1406250 None:intergenic 40.0%
TGGTTAACTTTCAGTTGCGA+AGG + chr8_3:1406653-1406672 Msa1268400:intron 40.0%
CCATCTGATGTTGTGTTATC+TGG - chr8_3:1406758-1406777 None:intergenic 40.0%
CCAGATAACACAACATCAGA+TGG + chr8_3:1406755-1406774 Msa1268400:CDS 40.0%
! CCACTCCTCATTTTCAAAAG+AGG - chr8_3:1406849-1406868 None:intergenic 40.0%
!! CCTCTTTTGAAAATGAGGAG+TGG + chr8_3:1406846-1406865 Msa1268400:CDS 40.0%
TATAGCACCTGGTAACAAAG+TGG + chr8_3:1406886-1406905 Msa1268400:CDS 40.0%
ACAAAATCTTCTCCAGGACT+CGG - chr8_3:1405258-1405277 None:intergenic 40.0%
! AGTCCTGGAGAAGATTTTGT+GGG + chr8_3:1405258-1405277 Msa1268400:CDS 40.0%
ATTCCCACAAAATCTTCTCC+AGG - chr8_3:1405264-1405283 None:intergenic 40.0%
TTTCCACACAACTTTGAGTG+GGG - chr8_3:1405407-1405426 None:intergenic 40.0%
CTTTCCACACAACTTTGAGT+GGG - chr8_3:1405408-1405427 None:intergenic 40.0%
TCTTTCCACACAACTTTGAG+TGG - chr8_3:1405409-1405428 None:intergenic 40.0%
AGTTGTGTGGAAAGAAACTC+AGG + chr8_3:1405414-1405433 Msa1268400:intron 40.0%
TTTGTGTCAGATGATGAGAG+TGG - chr8_3:1405629-1405648 None:intergenic 40.0%
TAGTACTCAAAGATTGTCCG+AGG + chr8_3:1405685-1405704 Msa1268400:CDS 40.0%
TGCGAAATCTCTAACAACCT+CGG - chr8_3:1405705-1405724 None:intergenic 40.0%
! AATGATTGACAAGTTGGAGG+AGG + chr8_3:1405848-1405867 Msa1268400:CDS 40.0%
!! AGTGTTATTTGCAAGCAGAG+TGG - chr8_3:1405898-1405917 None:intergenic 40.0%
TCAATATCCAAGAACCTTCC+AGG + chr8_3:1406134-1406153 Msa1268400:CDS 40.0%
TTCCAATTCCTTGGCATACA+AGG - chr8_3:1406231-1406250 None:intergenic 40.0%
TGGTTAACTTTCAGTTGCGA+AGG + chr8_3:1406653-1406672 Msa1268400:intron 40.0%
CCATCTGATGTTGTGTTATC+TGG - chr8_3:1406758-1406777 None:intergenic 40.0%
CCAGATAACACAACATCAGA+TGG + chr8_3:1406755-1406774 Msa1268400:CDS 40.0%
! CCACTCCTCATTTTCAAAAG+AGG - chr8_3:1406849-1406868 None:intergenic 40.0%
!! CCTCTTTTGAAAATGAGGAG+TGG + chr8_3:1406846-1406865 Msa1268400:CDS 40.0%
TATAGCACCTGGTAACAAAG+TGG + chr8_3:1406886-1406905 Msa1268400:CDS 40.0%
! GAGTCCTGGAGAAGATTTTG+TGG + chr8_3:1405257-1405276 Msa1268400:CDS 45.0%
!! CGAAGAACTTCTAGAGCTAG+CGG - chr8_3:1405321-1405340 None:intergenic 45.0%
AGCCGAGTGGAAATGTGTAT+TGG + chr8_3:1405365-1405384 Msa1268400:intron 45.0%
AATCCCCACTCAAAGTTGTG+TGG + chr8_3:1405401-1405420 Msa1268400:intron 45.0%
AAAGACTTCGAAGACCTGGA+AGG - chr8_3:1406151-1406170 None:intergenic 45.0%
ACACAAAGACTTCGAAGACC+TGG - chr8_3:1406155-1406174 None:intergenic 45.0%
AGGTCTTCGAAGTCTTTGTG+TGG + chr8_3:1406154-1406173 Msa1268400:CDS 45.0%
CGAAGTCTTTGTGTGGAGTA+CGG + chr8_3:1406161-1406180 Msa1268400:CDS 45.0%
! GGCATACAAGGCATCCAAAA+TGG - chr8_3:1406219-1406238 None:intergenic 45.0%
TTTGGATGCCTTGTATGCCA+AGG + chr8_3:1406220-1406239 Msa1268400:CDS 45.0%
TGCCTTGTATGCCAAGGAAT+TGG + chr8_3:1406226-1406245 Msa1268400:CDS 45.0%
! TGCAGCTGATTCCAATTCCT+TGG - chr8_3:1406240-1406259 None:intergenic 45.0%
TGCAGTCAAGTGCATGTTTC+AGG + chr8_3:1406308-1406327 Msa1268400:CDS 45.0%
TGTATGCATGCAAGTGAGAG+AGG - chr8_3:1406432-1406451 None:intergenic 45.0%
AATCTAGATATCAACGGCGC+TGG + chr8_3:1406596-1406615 Msa1268400:intron 45.0%
!!! TGGAGGTGGTGGTTGTTTTT+GGG + chr8_3:1406906-1406925 Msa1268400:CDS 45.0%
! GAGTCCTGGAGAAGATTTTG+TGG + chr8_3:1405257-1405276 Msa1268400:CDS 45.0%
!! CGAAGAACTTCTAGAGCTAG+CGG - chr8_3:1405321-1405340 None:intergenic 45.0%
AGCCGAGTGGAAATGTGTAT+TGG + chr8_3:1405365-1405384 Msa1268400:intron 45.0%
AATCCCCACTCAAAGTTGTG+TGG + chr8_3:1405401-1405420 Msa1268400:intron 45.0%
AAAGACTTCGAAGACCTGGA+AGG - chr8_3:1406151-1406170 None:intergenic 45.0%
ACACAAAGACTTCGAAGACC+TGG - chr8_3:1406155-1406174 None:intergenic 45.0%
AGGTCTTCGAAGTCTTTGTG+TGG + chr8_3:1406154-1406173 Msa1268400:CDS 45.0%
CGAAGTCTTTGTGTGGAGTA+CGG + chr8_3:1406161-1406180 Msa1268400:CDS 45.0%
! GGCATACAAGGCATCCAAAA+TGG - chr8_3:1406219-1406238 None:intergenic 45.0%
TTTGGATGCCTTGTATGCCA+AGG + chr8_3:1406220-1406239 Msa1268400:CDS 45.0%
TGCCTTGTATGCCAAGGAAT+TGG + chr8_3:1406226-1406245 Msa1268400:CDS 45.0%
! TGCAGCTGATTCCAATTCCT+TGG - chr8_3:1406240-1406259 None:intergenic 45.0%
TGCAGTCAAGTGCATGTTTC+AGG + chr8_3:1406308-1406327 Msa1268400:CDS 45.0%
TGTATGCATGCAAGTGAGAG+AGG - chr8_3:1406432-1406451 None:intergenic 45.0%
AATCTAGATATCAACGGCGC+TGG + chr8_3:1406596-1406615 Msa1268400:intron 45.0%
!!! TGGAGGTGGTGGTTGTTTTT+GGG + chr8_3:1406906-1406925 Msa1268400:CDS 45.0%
TACTTCTTGGAAGGCTCCGA+AGG - chr8_3:1405782-1405801 None:intergenic 50.0%
TCGAAGACCTGGAAGGTTCT+TGG - chr8_3:1406144-1406163 None:intergenic 50.0%
AAGTTTCGCCCTTCCACTTG+AGG - chr8_3:1406701-1406720 None:intergenic 50.0%
AGCACCTGGTAACAAAGTGG+AGG + chr8_3:1406889-1406908 Msa1268400:CDS 50.0%
ACCTGGTAACAAAGTGGAGG+TGG + chr8_3:1406892-1406911 Msa1268400:CDS 50.0%
ACCACCTCCACTTTGTTACC+AGG - chr8_3:1406896-1406915 None:intergenic 50.0%
TGGTAACAAAGTGGAGGTGG+TGG + chr8_3:1406895-1406914 Msa1268400:CDS 50.0%
!! GTGGAGGTGGTGGTTGTTTT+TGG + chr8_3:1406905-1406924 Msa1268400:CDS 50.0%
TCATATGTGGGCTCCACTTG+AGG - chr8_3:1407007-1407026 None:intergenic 50.0%
AGTGGAGCCCACATATGACT+TGG + chr8_3:1407009-1407028 Msa1268400:CDS 50.0%
TACTTCTTGGAAGGCTCCGA+AGG - chr8_3:1405782-1405801 None:intergenic 50.0%
TCGAAGACCTGGAAGGTTCT+TGG - chr8_3:1406144-1406163 None:intergenic 50.0%
AAGTTTCGCCCTTCCACTTG+AGG - chr8_3:1406701-1406720 None:intergenic 50.0%
AGCACCTGGTAACAAAGTGG+AGG + chr8_3:1406889-1406908 Msa1268400:CDS 50.0%
ACCTGGTAACAAAGTGGAGG+TGG + chr8_3:1406892-1406911 Msa1268400:CDS 50.0%
ACCACCTCCACTTTGTTACC+AGG - chr8_3:1406896-1406915 None:intergenic 50.0%
TGGTAACAAAGTGGAGGTGG+TGG + chr8_3:1406895-1406914 Msa1268400:CDS 50.0%
!! GTGGAGGTGGTGGTTGTTTT+TGG + chr8_3:1406905-1406924 Msa1268400:CDS 50.0%
TCATATGTGGGCTCCACTTG+AGG - chr8_3:1407007-1407026 None:intergenic 50.0%
AGTGGAGCCCACATATGACT+TGG + chr8_3:1407009-1407028 Msa1268400:CDS 50.0%
! CTAGATATCAACGGCGCTGG+TGG + chr8_3:1406599-1406618 Msa1268400:intron 55.0%
GCTGGTGGTTGTTTGCTCCT+TGG + chr8_3:1406614-1406633 Msa1268400:intron 55.0%
GGTGGTTGTTTGCTCCTTGG+TGG + chr8_3:1406617-1406636 Msa1268400:intron 55.0%
GGAGAGGTCCTCCTAACAAC+AGG - chr8_3:1406986-1407005 None:intergenic 55.0%
TAGGAGGACCTCTCCTCAAG+TGG + chr8_3:1406991-1407010 Msa1268400:CDS 55.0%
! CTAGATATCAACGGCGCTGG+TGG + chr8_3:1406599-1406618 Msa1268400:intron 55.0%
GCTGGTGGTTGTTTGCTCCT+TGG + chr8_3:1406614-1406633 Msa1268400:intron 55.0%
GGTGGTTGTTTGCTCCTTGG+TGG + chr8_3:1406617-1406636 Msa1268400:intron 55.0%
GGAGAGGTCCTCCTAACAAC+AGG - chr8_3:1406986-1407005 None:intergenic 55.0%
TAGGAGGACCTCTCCTCAAG+TGG + chr8_3:1406991-1407010 Msa1268400:CDS 55.0%
GCGTTCAAGCAACCGAGTCC+TGG + chr8_3:1405243-1405262 Msa1268400:CDS 60.0%
TTGAAAGGGGGGTAGCCGAG+TGG + chr8_3:1405352-1405371 Msa1268400:CDS 60.0%
TGTGGGCTCCACTTGAGGAG+AGG - chr8_3:1407002-1407021 None:intergenic 60.0%
GCGTTCAAGCAACCGAGTCC+TGG + chr8_3:1405243-1405262 Msa1268400:CDS 60.0%
TTGAAAGGGGGGTAGCCGAG+TGG + chr8_3:1405352-1405371 Msa1268400:CDS 60.0%
TGTGGGCTCCACTTGAGGAG+AGG - chr8_3:1407002-1407021 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 1405204 1407066 1405204 ID=Msa1268400;Name=Msa1268400
chr8_3 mRNA 1405204 1407066 1405204 ID=Msa1268400-mRNA-1;Parent=Msa1268400;Name=Msa1268400-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|1|1|3|0|434
chr8_3 exon 1405204 1405380 1405204 ID=Msa1268400-mRNA-1:exon:384;Parent=Msa1268400-mRNA-1
chr8_3 exon 1405594 1406329 1405594 ID=Msa1268400-mRNA-1:exon:385;Parent=Msa1268400-mRNA-1
chr8_3 exon 1406675 1407066 1406675 ID=Msa1268400-mRNA-1:exon:386;Parent=Msa1268400-mRNA-1
chr8_3 CDS 1405204 1405380 1405204 ID=Msa1268400-mRNA-1:cds;Parent=Msa1268400-mRNA-1
chr8_3 CDS 1405594 1406329 1405594 ID=Msa1268400-mRNA-1:cds;Parent=Msa1268400-mRNA-1
chr8_3 CDS 1406675 1407066 1406675 ID=Msa1268400-mRNA-1:cds;Parent=Msa1268400-mRNA-1
Gene Sequence

>Msa1268400

ATGGATCAAAGTGAATCACTAGAGCTTTTTAGTTGGCATGCGTTCAAGCAACCGAGTCCTGGAGAAGATTTTGTGGGAATGTCCAAAAATGTAGTTGAGTATTCTGGGGGATTGCCGCTAGCTCTAGAAGTTCTTCGATCATATTTGTTTGAAAGGGGGGTAGCCGAGTGGAAATGTAAGATGGAGAAGCTAAAAATTCTCAATCTTAGCCACTCTCATCATCTGACACAAACTCCAGACTTTTCAAACTTGCCTAATCTTGAAAAGCTAGTACTCAAAGATTGTCCGAGGTTGTTAGAGATTTCGCATACTATAGGACTTATGAATAAAGTTCTTTTGATAAATTTGGAAGATTGTATTAGCCTTCGGAGCCTTCCAAGAAGTATATACAAGTTGAAATCTCTAAAATCTCTCATTCTTTCCGGGTGTTTAATGATTGACAAGTTGGAGGAGGACTTAGAACAGATGAAATCTTTAACCACTCTGCTTGCAAATAACACTGCAATAAAAAGAGTACCATTTTCATTAGTAAGGTCAAAAAGCATTGGATATATTTCTTTGTGCAGCTATGAAGGATTTTCGCGTGATGTGTTTCCATCTATCATTCAGTCTTGGATGTCACCAACAAATAATTTTCAGTCCCCATTTCAAACATCTACCACTATGTCATCTCTAGTTTCTTTAGATGTACCATATAGTAGTTCCCACAAACTAGCATCAATATCCAAGAACCTTCCAGGTCTTCGAAGTCTTTGTGTGGAGTACGGATCCAAACTTAGATTTTCTCAAGATGTGACAACCATTTTGGATGCCTTGTATGCCAAGGAATTGGAATCAGCTGCAACTACATCACAAGTATCAAATATAAACAATTCTGCATTAATTCAATTCTGCAGTCAAGTGCATGTTTCAGGTCCTTCCGTAACTTTTAAAGTTCCTCAAGTGGAAGGGCGAAACTTGAAGTCGATGATGTGCATTGTCTATACTTCAACCCCAGATAACACAACATCAGATGGACTAAAAAATCTGTTGGTGATAAATCACACAAAGACTACCATTCATCTCTACAAGAAAGAAGCATTAACCTCTTTTGAAAATGAGGAGTGGCAGAATATTGTATCAAATATAGCACCTGGTAACAAAGTGGAGGTGGTGGTTGTTTTTGGGAGCTATTTCATTGTCAAGAAAACCATAGTTTATCTCATATATGATGAAAATGAACCTGTTGTTAGGAGGACCTCTCCTCAAGTGGAGCCCACATATGACTTGGAAGAAAATAAAAAGAAGAAAATTCGTGTGGAATAA
Protein sequence

>Msa1268400

MDQSESLELFSWHAFKQPSPGEDFVGMSKNVVEYSGGLPLALEVLRSYLFERGVAEWKCKMEKLKILNLSHSHHLTQTPDFSNLPNLEKLVLKDCPRLLEISHTIGLMNKVLLINLEDCISLRSLPRSIYKLKSLKSLILSGCLMIDKLEEDLEQMKSLTTLLANNTAIKRVPFSLVRSKSIGYISLCSYEGFSRDVFPSIIQSWMSPTNNFQSPFQTSTTMSSLVSLDVPYSSSHKLASISKNLPGLRSLCVEYGSKLRFSQDVTTILDALYAKELESAATTSQVSNINNSALIQFCSQVHVSGPSVTFKVPQVEGRNLKSMMCIVYTSTPDNTTSDGLKNLLVINHTKTTIHLYKKEALTSFENEEWQNIVSNIAPGNKVEVVVVFGSYFIVKKTIVYLIYDENEPVVRRTSPQVEPTYDLEENKKKKIRVE*