AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0800160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0800160 MtrunA17_Chr6g0454951 58.744 446 112 5 61 434 705 1150 1.05e-156 473
Msa0800160 MtrunA17_Chr6g0454951 72.308 65 18 0 1 65 431 495 2.03e-23 103
Msa0800160 MtrunA17_Chr6g0454851 61.702 423 104 6 57 428 705 1120 2.68e-156 471
Msa0800160 MtrunA17_Chr6g0454851 73.846 65 17 0 1 65 437 501 1.22e-23 104
Msa0800160 MtrunA17_Chr6g0454821 56.184 477 108 5 57 432 653 1129 1.66e-153 464
Msa0800160 MtrunA17_Chr6g0454821 69.231 65 20 0 1 65 385 449 6.89e-23 102
Msa0800160 MtrunA17_Chr4g0005591 56.264 455 118 5 57 430 681 1135 2.50e-152 461
Msa0800160 MtrunA17_Chr4g0005591 51.667 120 50 4 1 119 414 526 1.00e-24 107
Msa0800160 MtrunA17_Chr6g0455191 54.930 497 146 7 4 434 882 1366 5.12e-150 460
Msa0800160 MtrunA17_Chr6g0455191 76.923 65 15 0 1 65 653 717 5.94e-26 111
Msa0800160 MtrunA17_Chr7g0257531 59.908 434 123 6 23 405 228 661 1.92e-149 440
Msa0800160 MtrunA17_Chr7g0257531 75.385 65 16 0 1 65 4 68 5.80e-26 110
Msa0800160 MtrunA17_Chr4g0005871 55.580 448 114 5 60 430 743 1182 1.93e-148 452
Msa0800160 MtrunA17_Chr4g0005871 68.493 73 23 0 1 73 470 542 1.04e-23 104
Msa0800160 MtrunA17_Chr6g0455211 61.282 390 109 4 55 405 660 1046 2.21e-147 446
Msa0800160 MtrunA17_Chr6g0455211 72.308 65 18 0 1 65 389 453 1.14e-24 107
Msa0800160 MtrunA17_Chr6g0455551 55.819 464 128 8 4 405 649 1097 1.13e-143 438
Msa0800160 MtrunA17_Chr6g0455551 65.672 67 23 0 1 67 421 487 5.20e-22 99.4
Msa0800160 MtrunA17_Chr6g0454831 54.733 486 144 8 4 431 573 1040 6.08e-143 434
Msa0800160 MtrunA17_Chr6g0454831 78.125 64 14 0 1 64 345 408 7.35e-28 117
Msa0800160 MtrunA17_Chr6g0455131 57.110 429 125 6 61 430 703 1131 3.19e-141 432
Msa0800160 MtrunA17_Chr6g0455131 75.385 65 16 0 1 65 429 493 4.89e-26 111
Msa0800160 MtrunA17_Chr4g0005891 54.889 450 123 4 61 430 659 1108 3.17e-136 418
Msa0800160 MtrunA17_Chr4g0005891 70.769 65 19 0 1 65 385 449 1.69e-22 100
Msa0800160 MtrunA17_Chr6g0455251 57.683 423 129 6 60 434 747 1167 1.78e-135 417
Msa0800160 MtrunA17_Chr6g0455251 73.770 122 30 1 57 176 625 746 2.55e-49 180
Msa0800160 MtrunA17_Chr6g0455251 64.615 65 23 0 1 65 360 424 5.25e-19 90.1
Msa0800160 MtrunA17_Chr6g0454971 48.692 497 150 11 23 434 609 1085 5.56e-126 390
Msa0800160 MtrunA17_Chr6g0454971 75.385 65 16 0 1 65 385 449 1.63e-26 112
Msa0800160 MtrunA17_Chr6g0454961 47.477 535 162 14 4 431 600 1122 8.71e-123 383
Msa0800160 MtrunA17_Chr6g0454961 70.769 65 19 0 1 65 371 435 5.79e-23 102
Msa0800160 MtrunA17_Chr6g0455031 54.586 447 132 10 57 434 630 1074 2.67e-122 380
Msa0800160 MtrunA17_Chr6g0455031 63.077 65 24 0 1 65 364 428 3.01e-20 94.0
Msa0800160 MtrunA17_Chr7g0234901 48.366 459 168 6 4 405 91 537 3.86e-120 362
Msa0800160 MtrunA17_Chr4g0009101 51.870 401 123 5 61 405 1154 1540 8.67e-117 375
Msa0800160 MtrunA17_Chr4g0009101 62.687 67 25 0 1 67 880 946 8.24e-19 89.7
Msa0800160 MtrunA17_Chr4g0009041 47.312 465 153 11 4 405 1077 1512 8.73e-117 374
Msa0800160 MtrunA17_Chr4g0009041 64.179 67 24 0 1 67 850 916 8.33e-20 92.8
Msa0800160 MtrunA17_Chr4g0010711 47.109 467 179 10 4 419 1085 1534 4.64e-112 360
Msa0800160 MtrunA17_Chr4g0010711 58.209 67 28 0 1 67 355 421 1.02e-20 95.5
Msa0800160 MtrunA17_Chr4g0010711 58.824 68 27 1 1 67 855 922 2.12e-17 85.1
Msa0800160 MtrunA17_Chr7g0255681 50.249 402 143 4 61 405 1628 2029 1.05e-111 361
Msa0800160 MtrunA17_Chr7g0255681 60.294 68 26 1 1 67 1352 1419 3.26e-17 84.7
Msa0800160 MtrunA17_Chr7g0255681 48.352 91 34 2 1 90 850 928 4.61e-16 81.3
Msa0800160 MtrunA17_Chr7g0255681 60.000 65 25 1 1 64 349 413 9.53e-15 77.0
Msa0800160 MtrunA17_Chr4g0009141 45.756 483 168 12 4 426 1091 1539 3.75e-111 358
Msa0800160 MtrunA17_Chr4g0009141 59.701 67 27 0 1 67 862 928 2.05e-17 85.1
Msa0800160 MtrunA17_Chr4g0009171 49.132 403 133 5 61 405 1341 1729 9.62e-111 358
Msa0800160 MtrunA17_Chr4g0009171 68.966 116 35 1 61 176 614 728 1.82e-42 160
Msa0800160 MtrunA17_Chr4g0009171 61.765 68 25 1 1 67 1068 1135 1.15e-17 86.3
Msa0800160 MtrunA17_Chr4g0009171 59.701 67 27 0 1 67 342 408 3.01e-17 84.7
Msa0800160 MtrunA17_Chr6g0455181 59.692 325 94 5 54 344 2 323 5.94e-110 327
Msa0800160 MtrunA17_Chr4g0009241 47.768 448 165 10 4 412 1116 1533 1.61e-109 354
Msa0800160 MtrunA17_Chr4g0009241 62.687 67 25 0 1 67 884 950 1.64e-17 85.5
Msa0800160 MtrunA17_Chr4g0009241 42.268 97 51 2 1 94 381 475 2.67e-13 72.4
Msa0800160 MtrunA17_Chr4g0009301 45.140 463 166 8 4 405 1109 1544 1.48e-108 351
Msa0800160 MtrunA17_Chr4g0009301 61.194 67 26 0 1 67 882 948 4.88e-17 84.0
Msa0800160 MtrunA17_Chr4g0009401 49.127 401 129 6 66 405 1120 1506 1.02e-107 349
Msa0800160 MtrunA17_Chr4g0009401 62.687 67 25 0 1 67 838 904 1.06e-17 86.3
Msa0800160 MtrunA17_Chr4g0009401 43.617 94 52 1 1 94 340 432 1.00e-15 80.1
Msa0800160 MtrunA17_Chr6g0454871 72.541 244 63 2 58 297 8 251 3.36e-105 312
Msa0800160 MtrunA17_Chr4g0009361 43.534 464 172 7 4 403 81 518 3.43e-104 324
Msa0800160 MtrunA17_Chr4g0005851 61.204 299 94 7 23 304 598 891 3.29e-101 325
Msa0800160 MtrunA17_Chr4g0005851 72.308 65 18 0 1 65 374 438 7.44e-23 101
Msa0800160 MtrunA17_Chr2g0296451 41.975 486 213 13 2 433 88 558 7.11e-98 304
Msa0800160 MtrunA17_Chr5g0414761 41.684 487 210 12 4 434 360 828 8.17e-98 312
Msa0800160 MtrunA17_Chr5g0414761 57.377 61 26 0 5 65 135 195 1.56e-14 75.9
Msa0800160 MtrunA17_Chr8g0370511 42.584 418 194 7 61 434 619 1034 1.25e-96 312
Msa0800160 MtrunA17_Chr8g0370511 60.000 65 26 0 1 65 345 409 2.90e-17 84.7
Msa0800160 MtrunA17_Chr8g0338901 41.453 468 207 11 4 422 595 1044 1.26e-95 310
Msa0800160 MtrunA17_Chr8g0338901 56.923 65 28 0 1 65 366 430 2.35e-14 75.5
Msa0800160 MtrunA17_Chr8g0338981 40.909 484 213 12 7 434 575 1041 3.70e-95 309
Msa0800160 MtrunA17_Chr8g0338981 48.000 75 39 0 1 75 343 417 5.64e-15 77.4
Msa0800160 MtrunA17_Chr8g0338881 44.417 412 185 6 64 432 651 1061 8.10e-94 306
Msa0800160 MtrunA17_Chr8g0338881 61.404 57 22 0 1 57 374 430 3.67e-15 78.2
Msa0800160 MtrunA17_Chr5g0420331 43.000 400 184 6 61 418 620 1017 3.82e-93 302
Msa0800160 MtrunA17_Chr5g0420331 58.462 65 27 0 1 65 346 410 8.29e-17 83.2
Msa0800160 MtrunA17_Chr8g0338841 42.328 378 165 4 61 402 84 444 1.45e-92 288
Msa0800160 MtrunA17_Chr4g0014831 75.743 202 49 0 60 261 403 604 3.94e-92 291
Msa0800160 MtrunA17_Chr4g0014831 65.672 67 23 0 1 67 130 196 9.99e-23 100
Msa0800160 MtrunA17_Chr8g0339021 41.707 410 189 8 61 424 609 1014 3.97e-92 300
Msa0800160 MtrunA17_Chr8g0339021 56.923 65 28 0 1 65 339 403 1.01e-16 82.8
Msa0800160 MtrunA17_Chr3g0085731 44.286 420 170 9 61 434 633 1034 6.98e-92 301
Msa0800160 MtrunA17_Chr3g0085731 63.077 65 24 0 1 65 359 423 4.11e-19 90.5
Msa0800160 MtrunA17_Chr8g0339011 40.167 478 211 11 4 424 568 1027 1.34e-91 299
Msa0800160 MtrunA17_Chr8g0339011 53.846 65 30 0 1 65 339 403 1.01e-13 73.6
Msa0800160 MtrunA17_Chr5g0420341 42.250 400 187 6 61 418 620 1017 2.19e-91 298
Msa0800160 MtrunA17_Chr5g0420341 55.385 65 29 0 1 65 346 410 1.63e-14 75.9
Msa0800160 MtrunA17_Chr8g0339031 43.210 405 177 7 61 419 629 1026 1.48e-87 288
Msa0800160 MtrunA17_Chr8g0339031 60.000 65 26 0 1 65 355 419 6.85e-17 83.6
Msa0800160 MtrunA17_Chr8g0352221 44.386 383 184 9 61 434 589 951 7.48e-82 272
Msa0800160 MtrunA17_Chr8g0352221 50.769 65 32 0 1 65 339 403 1.17e-14 76.6
Msa0800160 MtrunA17_Chr5g0430541 40.885 384 175 8 61 405 143 513 2.80e-81 262
Msa0800160 MtrunA17_Chr6g0454911 55.224 268 79 5 206 434 1 266 2.06e-78 244
Msa0800160 MtrunA17_Chr6g0455221 77.576 165 35 1 57 219 618 782 4.93e-76 257
Msa0800160 MtrunA17_Chr6g0455221 43.478 299 93 7 206 434 866 1158 2.23e-53 192
Msa0800160 MtrunA17_Chr6g0455221 68.657 67 21 0 1 67 350 416 3.19e-22 99.8
Msa0800160 MtrunA17_Chr7g0223531 39.614 414 200 7 70 434 638 1050 2.38e-75 254
Msa0800160 MtrunA17_Chr7g0223531 60.938 64 25 0 1 64 355 418 2.78e-17 84.7
Msa0800160 MtrunA17_Chr4g0009011 44.771 306 99 5 156 405 1 292 7.28e-75 238
Msa0800160 MtrunA17_Chr8g0352211 40.407 344 161 8 64 406 634 934 1.28e-65 228
Msa0800160 MtrunA17_Chr8g0352211 49.351 77 35 1 1 77 357 429 4.19e-15 78.2
Msa0800160 MtrunA17_Chr6g0454861 68.750 112 33 1 323 434 1 110 8.42e-44 149
Msa0800160 MtrunA17_Chr4g0005601 75.269 93 23 0 58 150 65 157 6.37e-43 149
Msa0800160 MtrunA17_Chr3g0135571 52.288 153 50 1 305 434 26 178 1.02e-42 148
Msa0800160 MtrunA17_Chr3g0135541 52.288 153 50 1 305 434 178 330 4.11e-42 151
Msa0800160 MtrunA17_Chr3g0135511 51.634 153 51 1 305 434 26 178 9.71e-42 145
Msa0800160 MtrunA17_Chr8g0338811 61.111 108 42 0 92 199 1 108 8.97e-40 138
Msa0800160 MtrunA17_Chr4g0014821 50.000 148 50 2 302 426 19 165 6.78e-37 133
Msa0800160 MtrunA17_Chr6g0454931 71.591 88 23 1 57 142 680 767 8.61e-32 128
Msa0800160 MtrunA17_Chr6g0454931 67.692 65 21 0 1 65 412 476 7.52e-24 104
Msa0800160 MtrunA17_Chr4g0008981 57.609 92 38 1 315 405 1 92 1.50e-29 112
Msa0800160 MtrunA17_Chr4g0009211 55.000 100 41 2 315 410 1 100 1.29e-27 107
Msa0800160 MtrunA17_Chr8g0343791 44.444 153 79 3 155 303 2 152 1.70e-27 107
Msa0800160 MtrunA17_Chr3g0085531 30.180 222 113 4 249 434 9 224 8.33e-27 110
Msa0800160 MtrunA17_Chr3g0114381 29.391 279 145 6 206 434 1 277 1.07e-26 108
Msa0800160 MtrunA17_Chr8g0338931 38.931 131 73 2 305 434 40 164 3.20e-24 101
Msa0800160 MtrunA17_Chr6g0454901 64.615 65 23 0 1 65 156 220 2.25e-22 99.0
Msa0800160 MtrunA17_Chr8g0343781 48.052 77 40 0 323 399 5 81 7.72e-22 89.4
Msa0800160 MtrunA17_Chr8g0338801 42.574 101 56 2 305 403 100 200 1.19e-21 95.5
Msa0800160 MtrunA17_Chr7g0248521 47.458 118 61 1 61 178 625 741 5.88e-21 95.9
Msa0800160 MtrunA17_Chr7g0248521 49.206 63 32 0 3 65 353 415 1.53e-11 66.6
Msa0800160 MtrunA17_Chr4g0010681 58.209 67 28 0 1 67 4 70 6.12e-21 86.7
Msa0800160 MtrunA17_Chr7g0248121 45.763 118 63 1 61 178 626 742 1.76e-20 94.7
Msa0800160 MtrunA17_Chr7g0248121 32.178 202 110 6 58 255 693 871 6.12e-12 68.2
Msa0800160 MtrunA17_Chr7g0248121 47.619 63 33 0 3 65 354 416 9.72e-11 64.3
Msa0800160 MtrunA17_Chr7g0248201 47.368 114 59 1 63 176 17 129 2.34e-20 89.4
Msa0800160 MtrunA17_Chr7g0256881 40.476 126 68 2 61 186 617 735 3.10e-20 94.0
Msa0800160 MtrunA17_Chr7g0256881 36.301 146 91 2 58 202 684 828 4.34e-14 74.7
Msa0800160 MtrunA17_Chr3g0085541 63.077 65 24 0 1 65 358 422 7.30e-19 89.4
Msa0800160 MtrunA17_Chr3g0085541 54.545 77 33 1 61 137 632 706 3.65e-18 87.0
Msa0800160 MtrunA17_Chr4g0009021 61.194 67 26 0 1 67 18 84 9.48e-19 82.8
Msa0800160 MtrunA17_Chr4g0009351 62.687 67 25 0 1 67 257 323 1.13e-18 87.4
Msa0800160 MtrunA17_Chr3g0114401 60.000 65 26 0 1 65 226 290 1.81e-18 87.8
Msa0800160 MtrunA17_Chr7g0248511 46.552 116 61 1 61 176 632 746 2.58e-18 87.8
Msa0800160 MtrunA17_Chr7g0248511 49.206 63 32 0 3 65 360 422 1.01e-11 67.4
Msa0800160 MtrunA17_Chr7g0248511 33.146 178 105 6 58 228 699 869 3.67e-11 65.5
Msa0800160 MtrunA17_Chr5g0430531 53.247 77 33 1 1 77 348 421 2.70e-18 86.7
Msa0800160 MtrunA17_Chr8g0348541 45.690 116 62 1 61 176 631 745 1.25e-17 85.9
Msa0800160 MtrunA17_Chr7g0234891 58.824 68 27 1 1 67 265 332 1.50e-17 84.0
Msa0800160 MtrunA17_Chr6g0454881 58.065 62 26 0 344 405 1 62 1.53e-17 77.4
Msa0800160 MtrunA17_Chr2g0296461 55.385 65 29 0 1 65 132 196 2.34e-17 81.3
Msa0800160 MtrunA17_Chr4g0041441 49.438 89 43 1 57 143 608 696 3.06e-17 84.7
Msa0800160 MtrunA17_Chr6g0478451 41.593 113 64 1 64 176 620 730 1.08e-16 82.8
Msa0800160 MtrunA17_Chr8g0343801 55.385 65 29 0 1 65 350 414 3.25e-16 80.9
Msa0800160 MtrunA17_Chr8g0354681 30.814 172 104 2 5 176 589 745 4.43e-16 80.9
Msa0800160 MtrunA17_Chr8g0338851 53.846 65 30 0 1 65 248 312 5.93e-16 79.7
Msa0800160 MtrunA17_Chr8g0368251 26.239 343 195 12 33 334 577 902 9.06e-16 80.1
Msa0800160 MtrunA17_Chr8g0363851 38.168 131 79 1 62 190 463 593 5.01e-15 77.8
Msa0800160 MtrunA17_Chr8g0363851 38.462 91 54 2 5 94 172 261 5.47e-11 65.1
Msa0800160 MtrunA17_Chr8g0353371 37.607 117 71 1 60 176 639 753 1.17e-14 76.6
Msa0800160 MtrunA17_Chr4g0041241 38.462 104 61 2 43 143 607 710 1.30e-14 76.3
Msa0800160 MtrunA17_Chr6g0485991 43.820 89 48 1 57 143 621 709 1.31e-14 76.3
Msa0800160 MtrunA17_Chr6g0480051 32.759 174 89 3 29 176 332 503 1.71e-14 75.9
Msa0800160 MtrunA17_Chr4g0041611 31.674 221 126 7 58 261 630 842 2.16e-14 75.9
Msa0800160 MtrunA17_Chr6g0480321 35.714 154 81 5 34 176 436 582 3.07e-14 75.1
Msa0800160 MtrunA17_Chr6g0479821 36.975 119 73 1 58 176 618 734 3.33e-14 75.1
Msa0800160 MtrunA17_Chr4g0041431 40.449 89 51 1 57 143 439 527 3.36e-14 75.1
Msa0800160 MtrunA17_Chr4g0006771 29.353 201 110 5 29 202 555 750 4.29e-14 74.7
Msa0800160 MtrunA17_Chr6g0486221 44.944 89 47 1 57 143 626 714 4.90e-14 74.7
Msa0800160 MtrunA17_Chr1g0146421 31.319 182 105 5 21 187 556 732 5.48e-14 74.3
Msa0800160 MtrunA17_Chr6g0479671 34.375 128 82 1 60 187 612 737 5.85e-14 74.3
Msa0800160 MtrunA17_Chr8g0354701 37.168 113 69 1 64 176 632 742 6.51e-14 74.3
Msa0800160 MtrunA17_Chr8g0354711 28.070 171 108 2 6 176 582 737 1.11e-13 73.6
Msa0800160 MtrunA17_Chr6g0482111 32.308 130 87 1 60 189 624 752 1.47e-13 73.2
Msa0800160 MtrunA17_Chr6g0451551 39.823 113 66 1 64 176 777 887 2.02e-13 72.8
Msa0800160 MtrunA17_Chr6g0482511 32.164 171 105 3 6 176 610 769 2.25e-13 72.4
Msa0800160 MtrunA17_Chr8g0350801 33.566 143 81 4 56 194 636 768 2.36e-13 72.4
Msa0800160 MtrunA17_Chr6g0486481 42.697 89 49 1 57 143 621 709 2.53e-13 72.4
Msa0800160 MtrunA17_Chr4g0042011 43.750 80 45 0 64 143 634 713 2.72e-13 72.4
Msa0800160 MtrunA17_Chr6g0486521 43.820 89 47 2 57 143 629 716 3.82e-13 71.6
Msa0800160 MtrunA17_Chr6g0480421 32.044 181 105 6 34 203 440 613 4.01e-13 71.6
Msa0800160 MtrunA17_Chr2g0299561 41.304 92 52 1 57 146 619 710 5.16e-13 71.2
Msa0800160 MtrunA17_Chr6g0480311 35.897 117 72 2 60 176 601 714 6.17e-13 71.2
Msa0800160 MtrunA17_Chr6g0486361 45.000 80 44 0 64 143 627 706 7.10e-13 70.9
Msa0800160 MtrunA17_Chr6g0486731 42.697 89 49 1 57 143 621 709 7.12e-13 70.9
Msa0800160 MtrunA17_Chr6g0479651 38.028 142 83 3 61 202 622 758 7.39e-13 70.9
Msa0800160 MtrunA17_Chr6g0486301 41.573 89 50 1 57 143 618 706 1.60e-12 69.7
Msa0800160 MtrunA17_Chr6g0481011 35.398 113 71 1 64 176 645 755 1.75e-12 69.7
Msa0800160 MtrunA17_Chr6g0482351 37.069 116 69 3 60 174 1082 1194 2.22e-12 69.3
Msa0800160 MtrunA17_Chr6g0482351 37.736 106 54 3 33 126 606 711 4.96e-11 65.1
Msa0800160 MtrunA17_Chr6g0480041 38.136 118 70 2 60 176 629 744 2.43e-12 69.3
Msa0800160 MtrunA17_Chr4g0025831 34.188 117 75 1 60 176 610 724 2.85e-12 68.9
Msa0800160 MtrunA17_Chr2g0299811 31.944 144 95 2 61 204 470 610 3.90e-12 68.6
Msa0800160 MtrunA17_Chr3g0081531 31.783 129 87 1 61 189 615 742 4.65e-12 68.6
Msa0800160 MtrunA17_Chr3g0119601 50.769 65 32 0 1 65 347 411 6.36e-12 67.8
Msa0800160 MtrunA17_Chr3g0119601 28.358 201 86 4 63 216 624 813 7.32e-12 67.8
Msa0800160 MtrunA17_Chr6g0480151 29.268 164 113 2 14 176 560 721 7.45e-12 67.4
Msa0800160 MtrunA17_Chr6g0479001 31.624 117 78 1 60 176 597 711 8.20e-12 67.4
Msa0800160 MtrunA17_Chr2g0299881 32.759 116 77 1 61 176 627 741 1.11e-11 67.4
Msa0800160 MtrunA17_Chr4g0025771 34.188 117 75 1 60 176 68 182 1.19e-11 66.6
Msa0800160 MtrunA17_Chr6g0486311 40.449 89 51 1 57 143 619 707 1.22e-11 67.0
Msa0800160 MtrunA17_Chr2g0330121 32.418 182 107 5 6 187 407 572 1.24e-11 67.0
Msa0800160 MtrunA17_Chr4g0025811 35.897 117 73 1 60 176 606 720 1.31e-11 67.0
Msa0800160 MtrunA17_Chr8g0363891 40.708 113 67 0 66 178 2 114 1.34e-11 66.6
Msa0800160 MtrunA17_Chr2g0300251 29.078 141 96 2 60 198 617 755 1.47e-11 66.6
Msa0800160 MtrunA17_Chr6g0479761 37.288 118 71 2 60 176 471 586 1.48e-11 66.6
Msa0800160 MtrunA17_Chr6g0484161 34.375 128 82 1 60 187 633 758 1.56e-11 66.6
Msa0800160 MtrunA17_Chr4g0041941 42.045 88 51 0 56 143 614 701 1.81e-11 66.6
Msa0800160 MtrunA17_Chr4g0010521 30.303 132 91 1 61 192 616 746 2.26e-11 66.2
Msa0800160 MtrunA17_Chr8g0354721 33.628 113 73 1 64 176 631 741 2.51e-11 66.2
Msa0800160 MtrunA17_Chr6g0480521 35.043 117 74 1 60 176 611 725 3.03e-11 65.9
Msa0800160 MtrunA17_Chr5g0415831 33.628 113 73 1 64 176 1 111 3.04e-11 65.1
Msa0800160 MtrunA17_Chr6g0479731 35.043 117 74 1 60 176 605 719 3.11e-11 65.5
Msa0800160 MtrunA17_Chr2g0299921 33.621 116 76 1 61 176 621 735 3.25e-11 65.9
Msa0800160 MtrunA17_Chr4g0041951 38.202 89 53 1 57 143 669 757 3.98e-11 65.5
Msa0800160 MtrunA17_Chr6g0478771 29.412 136 94 1 64 199 602 735 4.61e-11 65.1
Msa0800160 MtrunA17_Chr6g0481141 34.483 116 74 1 61 176 665 778 4.62e-11 65.1
Msa0800160 MtrunA17_Chr2g0299851 33.621 116 76 1 61 176 622 736 4.66e-11 65.1
Msa0800160 MtrunA17_Chr3g0084731 33.043 115 75 2 1 115 353 465 5.49e-11 65.1
Msa0800160 MtrunA17_Chr6g0482471 37.736 106 54 3 33 126 785 890 6.68e-11 64.7
Msa0800160 MtrunA17_Chr6g0480461 34.513 113 72 1 64 176 662 772 6.82e-11 64.7
Msa0800160 MtrunA17_Chr6g0480911 33.333 117 76 1 60 176 637 751 7.75e-11 64.3
Msa0800160 MtrunA17_Chr6g0486271 41.975 81 45 1 57 135 617 697 8.30e-11 64.3
Msa0800160 MtrunA17_Chr6g0479621 34.188 117 75 1 60 176 609 723 9.07e-11 64.3
Msa0800160 MtrunA17_Chr4g0041981 41.026 78 46 0 61 138 139 216 9.09e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0800160 AT5G36930.4 44.776 134 73 1 64 196 622 755 1.43e-26 113
Msa0800160 AT5G36930.4 50.769 65 32 0 1 65 344 408 4.98e-14 75.1
Msa0800160 AT5G36930.1 44.776 134 73 1 64 196 622 755 1.43e-26 113
Msa0800160 AT5G36930.1 50.769 65 32 0 1 65 344 408 4.98e-14 75.1
Msa0800160 AT5G36930.2 44.776 134 73 1 64 196 625 758 1.50e-26 113
Msa0800160 AT5G36930.2 50.769 65 32 0 1 65 347 411 5.16e-14 75.1
Msa0800160 AT5G36930.3 44.776 134 73 1 64 196 622 755 1.73e-26 113
Msa0800160 AT5G36930.3 50.769 65 32 0 1 65 344 408 5.44e-14 74.7
Msa0800160 AT1G27180.1 37.302 126 79 0 62 187 843 968 3.07e-16 82.0
Msa0800160 AT1G27180.5 37.302 126 79 0 62 187 679 804 3.54e-16 81.6
Msa0800160 AT1G27180.8 37.302 126 79 0 62 187 679 804 3.54e-16 81.6
Msa0800160 AT1G27180.2 37.302 126 79 0 62 187 681 806 3.94e-16 81.6
Msa0800160 AT1G27180.3 37.302 126 79 0 62 187 681 806 4.26e-16 81.3
Msa0800160 AT1G27180.7 37.302 126 79 0 62 187 505 630 4.78e-16 81.3
Msa0800160 AT1G27180.6 37.302 126 79 0 62 187 505 630 4.78e-16 81.3
Msa0800160 AT1G27180.4 37.302 126 79 0 62 187 505 630 4.78e-16 81.3
Msa0800160 AT4G12010.1 39.370 127 67 3 64 187 645 764 1.95e-14 76.3
Msa0800160 AT1G27170.1 35.507 138 87 1 52 187 658 795 7.57e-14 74.3
Msa0800160 AT1G27170.2 35.507 138 87 1 52 187 658 795 7.70e-14 74.3
Msa0800160 AT5G38350.1 40.909 110 61 2 64 173 480 585 7.91e-13 71.2
Msa0800160 AT5G45200.1 35.338 133 65 2 61 173 708 839 9.02e-13 71.2
Msa0800160 AT5G45200.2 35.338 133 65 2 61 173 464 595 1.12e-12 70.9
Msa0800160 AT5G45200.3 35.338 133 65 2 61 173 708 839 1.52e-12 70.1
Msa0800160 AT2G16870.1 26.277 274 173 5 61 333 622 867 1.00e-11 67.8
Msa0800160 AT2G16870.3 26.277 274 173 5 61 333 348 593 1.10e-11 67.4
Msa0800160 AT2G16870.2 26.277 274 173 5 61 333 348 593 1.10e-11 67.4
Msa0800160 AT4G19510.10 40.541 111 61 3 62 172 631 736 1.28e-11 67.4
Msa0800160 AT4G19510.2 40.541 111 61 3 62 172 631 736 1.29e-11 67.4
Msa0800160 AT4G19510.3 40.541 111 61 3 62 172 671 776 1.38e-11 67.0
Msa0800160 AT4G19510.9 40.541 111 61 3 62 172 644 749 1.68e-11 67.0
Msa0800160 AT4G19510.8 40.541 111 61 3 62 172 634 739 1.70e-11 67.0
Msa0800160 AT4G19510.1 40.541 111 61 3 62 172 634 739 1.70e-11 67.0
Msa0800160 AT4G19510.6 40.541 111 61 3 62 172 644 749 1.84e-11 67.0
Msa0800160 AT4G19510.5 40.541 111 61 3 62 172 671 776 1.95e-11 67.0
Msa0800160 AT4G19510.4 40.541 111 61 3 62 172 671 776 1.95e-11 67.0
Msa0800160 AT4G19510.7 40.541 111 61 3 62 172 671 776 1.95e-11 67.0
Msa0800160 AT4G19500.1 37.190 121 72 2 56 176 1162 1278 2.53e-11 66.6
Msa0800160 AT2G17060.2 39.200 125 73 2 60 184 748 869 3.15e-11 66.2
Msa0800160 AT2G17060.1 39.200 125 73 2 60 184 748 869 3.16e-11 66.2
Msa0800160 AT4G19500.2 37.190 121 72 2 56 176 639 755 3.33e-11 65.9
Msa0800160 AT5G44870.1 33.099 142 86 4 38 173 740 878 7.14e-11 65.1
Msa0800160 AT1G63750.3 25.000 240 154 5 45 284 614 827 9.53e-11 64.7

Find 79 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATCTGATGTTGTGTTATC+TGG 0.165526 5_3:-13570568 None:intergenic
TCAAGATGTGACAACCATTT+TGG 0.168483 5_3:+13570015 Msa0800160:CDS
TGCAGTCAAGTGCATGTTTC+AGG 0.185399 5_3:+13570121 Msa0800160:CDS
CTAAAATCTCTCATTCTTTC+CGG 0.204571 5_3:+13569632 Msa0800160:CDS
TTTGACCTTACTAATGAAAA+TGG 0.241485 5_3:-13569746 None:intergenic
TTCAACTTGTATATACTTCT+TGG 0.249115 5_3:-13569605 None:intergenic
TCGAAGACCTGGAAGGTTCT+TGG 0.305640 5_3:-13569954 None:intergenic
ATCATATATGAGATAAACTA+TGG 0.308774 5_3:-13570764 None:intergenic
GGCATACAAGGCATCCAAAA+TGG 0.345989 5_3:-13570029 None:intergenic
TAAAATCTCTCATTCTTTCC+GGG 0.374649 5_3:+13569633 Msa0800160:CDS
TTAGAGATTTCGCATACTAT+AGG 0.374988 5_3:+13569524 Msa0800160:CDS
ATCTTGAGAAAATCTAAGTT+TGG 0.378654 5_3:-13569999 None:intergenic
TTAGGCAAGTTTGAAAAGTC+TGG 0.392033 5_3:-13569464 None:intergenic
TGCCTTGTATGCCAAGGAAT+TGG 0.405906 5_3:+13570039 Msa0800160:CDS
TCAATATCCAAGAACCTTCC+AGG 0.406907 5_3:+13569947 Msa0800160:CDS
ATCCAAGACTGAATGATAGA+TGG 0.413984 5_3:-13569824 None:intergenic
AAAATGTAGTTGAGTATTCT+GGG 0.414551 5_3:+13569102 Msa0800160:CDS
TTCCAATTCCTTGGCATACA+AGG 0.419393 5_3:-13570041 None:intergenic
TGCAGCTGATTCCAATTCCT+TGG 0.424713 5_3:-13570050 None:intergenic
TTGAGGAACTTTAAAAGTTA+CGG 0.424943 5_3:-13570494 None:intergenic
TTCGATCATATTTGTTTGAA+AGG 0.427434 5_3:+13569150 Msa0800160:CDS
TGGAAGATTGTATTAGCCTT+CGG 0.428759 5_3:+13569576 Msa0800160:CDS
AGTTTGTGGGAACTACTATA+TGG 0.430491 5_3:-13569920 None:intergenic
ATTTCTTTGTGCAGCTATGA+AGG 0.433167 5_3:+13569782 Msa0800160:CDS
ATGAAAATGAACCTGTTGTT+AGG 0.434005 5_3:+13570785 Msa0800160:CDS
CATCTGATGTTGTGTTATCT+GGG 0.449465 5_3:-13570567 None:intergenic
TTCCATCTATCATTCAGTCT+TGG 0.451033 5_3:+13569822 Msa0800160:CDS
GCGTTCAAGCAACCGAGTCC+TGG 0.457006 5_3:+13569056 Msa0800160:CDS
TCGATCATATTTGTTTGAAA+GGG 0.457331 5_3:+13569151 Msa0800160:CDS
TAGTGGTAGATGTTTGAAAT+GGG 0.459853 5_3:-13569871 None:intergenic
CGAAGTCTTTGTGTGGAGTA+CGG 0.461922 5_3:+13569974 Msa0800160:CDS
GGGGACTGAAAATTATTTGT+TGG 0.466397 5_3:-13569851 None:intergenic
TTTAATGATTGACAAGTTGG+AGG 0.486269 5_3:+13569658 Msa0800160:CDS
TTCTTTCTTGTAGAGATGAA+TGG 0.492016 5_3:-13570629 None:intergenic
GGATATTGATGCTAGTTTGT+GGG 0.501750 5_3:-13569933 None:intergenic
ATAGTGGTAGATGTTTGAAA+TGG 0.502214 5_3:-13569872 None:intergenic
GTGTTTAATGATTGACAAGT+TGG 0.504099 5_3:+13569655 Msa0800160:CDS
AAGTTTCGCCCTTCCACTTG+AGG 0.504998 5_3:-13570511 None:intergenic
GGAGAGGTCCTCCTAACAAC+AGG 0.509078 5_3:-13570796 None:intergenic
TTTAAAGTTCCTCAAGTGGA+AGG 0.525960 5_3:+13570502 Msa0800160:CDS
TGGATATTGATGCTAGTTTG+TGG 0.533202 5_3:-13569934 None:intergenic
ACCACCTCCACTTTGTTACC+AGG 0.533251 5_3:-13570706 None:intergenic
ACTTGTATATACTTCTTGGA+AGG 0.536811 5_3:-13569601 None:intergenic
ACAAAATCTTCTCCAGGACT+CGG 0.542574 5_3:-13569068 None:intergenic
AATGATTGACAAGTTGGAGG+AGG 0.544873 5_3:+13569661 Msa0800160:CDS
ATCATATTTGTTTGAAAGGG+GGG 0.546029 5_3:+13569154 Msa0800160:CDS
CGATCATATTTGTTTGAAAG+GGG 0.547510 5_3:+13569152 Msa0800160:CDS
ACACAAAGACTTCGAAGACC+TGG 0.549021 5_3:-13569965 None:intergenic
TCATATGTGGGCTCCACTTG+AGG 0.550903 5_3:-13570817 None:intergenic
TACTTCTTGGAAGGCTCCGA+AGG 0.560309 5_3:-13569592 None:intergenic
TTTGGATGCCTTGTATGCCA+AGG 0.562454 5_3:+13570033 Msa0800160:CDS
CTTGTCAATCATTAAACACC+CGG 0.562910 5_3:-13569651 None:intergenic
CCAGATAACACAACATCAGA+TGG 0.563740 5_3:+13570568 Msa0800160:CDS
ACCTGGTAACAAAGTGGAGG+TGG 0.564433 5_3:+13570705 Msa0800160:CDS
ATTCCCACAAAATCTTCTCC+AGG 0.566941 5_3:-13569074 None:intergenic
TTAAAGTTCCTCAAGTGGAA+GGG 0.571654 5_3:+13570503 Msa0800160:CDS
AGTGGAGCCCACATATGACT+TGG 0.572171 5_3:+13570822 Msa0800160:CDS
AGGTCTTCGAAGTCTTTGTG+TGG 0.578274 5_3:+13569967 Msa0800160:CDS
TTCCAATACACATTTCCACT+CGG 0.583358 5_3:-13569180 None:intergenic
GATCATATTTGTTTGAAAGG+GGG 0.586103 5_3:+13569153 Msa0800160:CDS
GGAACTTTAAAAGTTACGGA+AGG 0.595312 5_3:-13570490 None:intergenic
TAGGAGGACCTCTCCTCAAG+TGG 0.596198 5_3:+13570804 Msa0800160:CDS
ATCTGATGTTGTGTTATCTG+GGG 0.602942 5_3:-13570566 None:intergenic
AAAATGAACCTGTTGTTAGG+AGG 0.606690 5_3:+13570788 Msa0800160:CDS
CGAAGAACTTCTAGAGCTAG+CGG 0.619934 5_3:-13569131 None:intergenic
TATAGCACCTGGTAACAAAG+TGG 0.620153 5_3:+13570699 Msa0800160:CDS
TGTGGGCTCCACTTGAGGAG+AGG 0.628621 5_3:-13570812 None:intergenic
AGAAACTAGAGATGACATAG+TGG 0.636143 5_3:-13569888 None:intergenic
AATGTAGTTGAGTATTCTGG+GGG 0.636376 5_3:+13569104 Msa0800160:CDS
TGCGAAATCTCTAACAACCT+CGG 0.638438 5_3:-13569515 None:intergenic
AAATGTAGTTGAGTATTCTG+GGG 0.638618 5_3:+13569103 Msa0800160:CDS
ATTGTATCAAATATAGCACC+TGG 0.639343 5_3:+13570688 Msa0800160:CDS
TGGTAACAAAGTGGAGGTGG+TGG 0.649946 5_3:+13570708 Msa0800160:CDS
AGTGGTAGATGTTTGAAATG+GGG 0.664683 5_3:-13569870 None:intergenic
TAGTACTCAAAGATTGTCCG+AGG 0.667956 5_3:+13569498 Msa0800160:CDS
AGCACCTGGTAACAAAGTGG+AGG 0.685797 5_3:+13570702 Msa0800160:CDS
AGTGTTATTTGCAAGCAGAG+TGG 0.686692 5_3:-13569708 None:intergenic
AAAGACTTCGAAGACCTGGA+AGG 0.690281 5_3:-13569961 None:intergenic
TTTGTGTCAGATGATGAGAG+TGG 0.760329 5_3:-13569439 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGAATTACTATTTTATTATT+TGG + chr5_3:13569338-13569357 Msa0800160:intron 10.0%
!!! TGAATTACTATTTTATTATT+TGG + chr5_3:13569338-13569357 Msa0800160:intron 10.0%
!! TAAAATAGTAATTCAATTTG+AGG - chr5_3:13569333-13569352 None:intergenic 15.0%
!!! TAAAGTTCTTTTGATAAATT+TGG + chr5_3:13569556-13569575 Msa0800160:CDS 15.0%
!! TAAAATAGTAATTCAATTTG+AGG - chr5_3:13569333-13569352 None:intergenic 15.0%
!!! TAAAGTTCTTTTGATAAATT+TGG + chr5_3:13569556-13569575 Msa0800160:CDS 15.0%
!!! AATTTTATAGAGAAAGCTTA+GGG - chr5_3:13569374-13569393 None:intergenic 20.0%
!!! AAATTTTATAGAGAAAGCTT+AGG - chr5_3:13569375-13569394 None:intergenic 20.0%
!! AAGTCTCTATTAATTCAAAT+GGG + chr5_3:13570160-13570179 Msa0800160:intron 20.0%
!! ATCATATATGAGATAAACTA+TGG - chr5_3:13570767-13570786 None:intergenic 20.0%
!!! AATTTTATAGAGAAAGCTTA+GGG - chr5_3:13569374-13569393 None:intergenic 20.0%
!!! AAATTTTATAGAGAAAGCTT+AGG - chr5_3:13569375-13569394 None:intergenic 20.0%
!! AAGTCTCTATTAATTCAAAT+GGG + chr5_3:13570160-13570179 Msa0800160:intron 20.0%
!! ATCATATATGAGATAAACTA+TGG - chr5_3:13570767-13570786 None:intergenic 20.0%
!! AGAATACTCAACTACATTTT+TGG - chr5_3:13569102-13569121 None:intergenic 25.0%
! AAAAATGTAGTTGAGTATTC+TGG + chr5_3:13569101-13569120 Msa0800160:CDS 25.0%
! AAAATGTAGTTGAGTATTCT+GGG + chr5_3:13569102-13569121 Msa0800160:CDS 25.0%
! TTCGATCATATTTGTTTGAA+AGG + chr5_3:13569150-13569169 Msa0800160:CDS 25.0%
! TCGATCATATTTGTTTGAAA+GGG + chr5_3:13569151-13569170 Msa0800160:CDS 25.0%
!! ATTTTATAGAGAAAGCTTAG+GGG - chr5_3:13569373-13569392 None:intergenic 25.0%
! TTCAACTTGTATATACTTCT+TGG - chr5_3:13569608-13569627 None:intergenic 25.0%
! TTTGACCTTACTAATGAAAA+TGG - chr5_3:13569749-13569768 None:intergenic 25.0%
! ATCTTGAGAAAATCTAAGTT+TGG - chr5_3:13570002-13570021 None:intergenic 25.0%
! TTGAATTAATAGAGACTTCA+TGG - chr5_3:13570158-13570177 None:intergenic 25.0%
! GAAGTCTCTATTAATTCAAA+TGG + chr5_3:13570159-13570178 Msa0800160:intron 25.0%
!! CTTTCAGAGTATTAGTTAAT+TGG - chr5_3:13570195-13570214 None:intergenic 25.0%
!! TCTGAAAGAGAAAATTTTAC+AGG + chr5_3:13570207-13570226 Msa0800160:intron 25.0%
! TTACAGAATCTAGATATCAA+CGG + chr5_3:13570403-13570422 Msa0800160:intron 25.0%
!! TTGAGGAACTTTAAAAGTTA+CGG - chr5_3:13570497-13570516 None:intergenic 25.0%
!!! ATTAACCTCTTTTGAAAATG+AGG + chr5_3:13570654-13570673 Msa0800160:CDS 25.0%
! TAAAAAGAAGAAAATTCGTG+TGG + chr5_3:13570852-13570871 Msa0800160:CDS 25.0%
!! AGAATACTCAACTACATTTT+TGG - chr5_3:13569102-13569121 None:intergenic 25.0%
! AAAAATGTAGTTGAGTATTC+TGG + chr5_3:13569101-13569120 Msa0800160:CDS 25.0%
! AAAATGTAGTTGAGTATTCT+GGG + chr5_3:13569102-13569121 Msa0800160:CDS 25.0%
! TTCGATCATATTTGTTTGAA+AGG + chr5_3:13569150-13569169 Msa0800160:CDS 25.0%
! TCGATCATATTTGTTTGAAA+GGG + chr5_3:13569151-13569170 Msa0800160:CDS 25.0%
!! ATTTTATAGAGAAAGCTTAG+GGG - chr5_3:13569373-13569392 None:intergenic 25.0%
! TTCAACTTGTATATACTTCT+TGG - chr5_3:13569608-13569627 None:intergenic 25.0%
! TTTGACCTTACTAATGAAAA+TGG - chr5_3:13569749-13569768 None:intergenic 25.0%
! ATCTTGAGAAAATCTAAGTT+TGG - chr5_3:13570002-13570021 None:intergenic 25.0%
! TTGAATTAATAGAGACTTCA+TGG - chr5_3:13570158-13570177 None:intergenic 25.0%
! GAAGTCTCTATTAATTCAAA+TGG + chr5_3:13570159-13570178 Msa0800160:intron 25.0%
!! CTTTCAGAGTATTAGTTAAT+TGG - chr5_3:13570195-13570214 None:intergenic 25.0%
!! TCTGAAAGAGAAAATTTTAC+AGG + chr5_3:13570207-13570226 Msa0800160:intron 25.0%
! TTACAGAATCTAGATATCAA+CGG + chr5_3:13570403-13570422 Msa0800160:intron 25.0%
!! TTGAGGAACTTTAAAAGTTA+CGG - chr5_3:13570497-13570516 None:intergenic 25.0%
!!! ATTAACCTCTTTTGAAAATG+AGG + chr5_3:13570654-13570673 Msa0800160:CDS 25.0%
! TAAAAAGAAGAAAATTCGTG+TGG + chr5_3:13570852-13570871 Msa0800160:CDS 25.0%
!! AATCACTAGAGCTTTTTAGT+TGG + chr5_3:13569030-13569049 Msa0800160:CDS 30.0%
AAATGTAGTTGAGTATTCTG+GGG + chr5_3:13569103-13569122 Msa0800160:CDS 30.0%
CGATCATATTTGTTTGAAAG+GGG + chr5_3:13569152-13569171 Msa0800160:CDS 30.0%
GATCATATTTGTTTGAAAGG+GGG + chr5_3:13569153-13569172 Msa0800160:CDS 30.0%
ATCATATTTGTTTGAAAGGG+GGG + chr5_3:13569154-13569173 Msa0800160:CDS 30.0%
ATTTATGTTCTTGCAGAAGA+TGG + chr5_3:13569391-13569410 Msa0800160:intron 30.0%
!!! AGTACTAGCTTTTCAAGATT+AGG - chr5_3:13569485-13569504 None:intergenic 30.0%
TTAGAGATTTCGCATACTAT+AGG + chr5_3:13569524-13569543 Msa0800160:CDS 30.0%
ACTTGTATATACTTCTTGGA+AGG - chr5_3:13569604-13569623 None:intergenic 30.0%
CTAAAATCTCTCATTCTTTC+CGG + chr5_3:13569632-13569651 Msa0800160:CDS 30.0%
TAAAATCTCTCATTCTTTCC+GGG + chr5_3:13569633-13569652 Msa0800160:CDS 30.0%
GTGTTTAATGATTGACAAGT+TGG + chr5_3:13569655-13569674 Msa0800160:CDS 30.0%
! TTTAATGATTGACAAGTTGG+AGG + chr5_3:13569658-13569677 Msa0800160:CDS 30.0%
! GAGTACCATTTTCATTAGTA+AGG + chr5_3:13569741-13569760 Msa0800160:CDS 30.0%
! TTAGTAAGGTCAAAAAGCAT+TGG + chr5_3:13569755-13569774 Msa0800160:CDS 30.0%
! TAGTGGTAGATGTTTGAAAT+GGG - chr5_3:13569874-13569893 None:intergenic 30.0%
ATAGTGGTAGATGTTTGAAA+TGG - chr5_3:13569875-13569894 None:intergenic 30.0%
CAACTGAAAGTTAACCAATT+TGG - chr5_3:13570463-13570482 None:intergenic 30.0%
!!! AACTTTTAAAGTTCCTCAAG+TGG + chr5_3:13570498-13570517 Msa0800160:CDS 30.0%
!! AGATGGACTAAAAAATCTGT+TGG + chr5_3:13570585-13570604 Msa0800160:CDS 30.0%
TTCTTTCTTGTAGAGATGAA+TGG - chr5_3:13570632-13570651 None:intergenic 30.0%
ATTGTATCAAATATAGCACC+TGG + chr5_3:13570688-13570707 Msa0800160:CDS 30.0%
ATGAAAATGAACCTGTTGTT+AGG + chr5_3:13570785-13570804 Msa0800160:CDS 30.0%
! TTTTCTTCCAAGTCATATGT+GGG - chr5_3:13570832-13570851 None:intergenic 30.0%
! ATTTTCTTCCAAGTCATATG+TGG - chr5_3:13570833-13570852 None:intergenic 30.0%
!! AATCACTAGAGCTTTTTAGT+TGG + chr5_3:13569030-13569049 Msa0800160:CDS 30.0%
AAATGTAGTTGAGTATTCTG+GGG + chr5_3:13569103-13569122 Msa0800160:CDS 30.0%
CGATCATATTTGTTTGAAAG+GGG + chr5_3:13569152-13569171 Msa0800160:CDS 30.0%
GATCATATTTGTTTGAAAGG+GGG + chr5_3:13569153-13569172 Msa0800160:CDS 30.0%
ATCATATTTGTTTGAAAGGG+GGG + chr5_3:13569154-13569173 Msa0800160:CDS 30.0%
ATTTATGTTCTTGCAGAAGA+TGG + chr5_3:13569391-13569410 Msa0800160:intron 30.0%
!!! AGTACTAGCTTTTCAAGATT+AGG - chr5_3:13569485-13569504 None:intergenic 30.0%
TTAGAGATTTCGCATACTAT+AGG + chr5_3:13569524-13569543 Msa0800160:CDS 30.0%
ACTTGTATATACTTCTTGGA+AGG - chr5_3:13569604-13569623 None:intergenic 30.0%
CTAAAATCTCTCATTCTTTC+CGG + chr5_3:13569632-13569651 Msa0800160:CDS 30.0%
TAAAATCTCTCATTCTTTCC+GGG + chr5_3:13569633-13569652 Msa0800160:CDS 30.0%
GTGTTTAATGATTGACAAGT+TGG + chr5_3:13569655-13569674 Msa0800160:CDS 30.0%
! TTTAATGATTGACAAGTTGG+AGG + chr5_3:13569658-13569677 Msa0800160:CDS 30.0%
! GAGTACCATTTTCATTAGTA+AGG + chr5_3:13569741-13569760 Msa0800160:CDS 30.0%
! TTAGTAAGGTCAAAAAGCAT+TGG + chr5_3:13569755-13569774 Msa0800160:CDS 30.0%
! TAGTGGTAGATGTTTGAAAT+GGG - chr5_3:13569874-13569893 None:intergenic 30.0%
ATAGTGGTAGATGTTTGAAA+TGG - chr5_3:13569875-13569894 None:intergenic 30.0%
CAACTGAAAGTTAACCAATT+TGG - chr5_3:13570463-13570482 None:intergenic 30.0%
!!! AACTTTTAAAGTTCCTCAAG+TGG + chr5_3:13570498-13570517 Msa0800160:CDS 30.0%
!! AGATGGACTAAAAAATCTGT+TGG + chr5_3:13570585-13570604 Msa0800160:CDS 30.0%
TTCTTTCTTGTAGAGATGAA+TGG - chr5_3:13570632-13570651 None:intergenic 30.0%
ATTGTATCAAATATAGCACC+TGG + chr5_3:13570688-13570707 Msa0800160:CDS 30.0%
ATGAAAATGAACCTGTTGTT+AGG + chr5_3:13570785-13570804 Msa0800160:CDS 30.0%
! TTTTCTTCCAAGTCATATGT+GGG - chr5_3:13570832-13570851 None:intergenic 30.0%
! ATTTTCTTCCAAGTCATATG+TGG - chr5_3:13570833-13570852 None:intergenic 30.0%
AATGTAGTTGAGTATTCTGG+GGG + chr5_3:13569104-13569123 Msa0800160:CDS 35.0%
TTCCAATACACATTTCCACT+CGG - chr5_3:13569183-13569202 None:intergenic 35.0%
TTAGGCAAGTTTGAAAAGTC+TGG - chr5_3:13569467-13569486 None:intergenic 35.0%
!! TGGAAGATTGTATTAGCCTT+CGG + chr5_3:13569576-13569595 Msa0800160:CDS 35.0%
CTTGTCAATCATTAAACACC+CGG - chr5_3:13569654-13569673 None:intergenic 35.0%
ATTTCTTTGTGCAGCTATGA+AGG + chr5_3:13569782-13569801 Msa0800160:CDS 35.0%
TTCCATCTATCATTCAGTCT+TGG + chr5_3:13569822-13569841 Msa0800160:CDS 35.0%
ATCCAAGACTGAATGATAGA+TGG - chr5_3:13569827-13569846 None:intergenic 35.0%
GGGGACTGAAAATTATTTGT+TGG - chr5_3:13569854-13569873 None:intergenic 35.0%
! AGTGGTAGATGTTTGAAATG+GGG - chr5_3:13569873-13569892 None:intergenic 35.0%
AGAAACTAGAGATGACATAG+TGG - chr5_3:13569891-13569910 None:intergenic 35.0%
AGTTTGTGGGAACTACTATA+TGG - chr5_3:13569923-13569942 None:intergenic 35.0%
! GGATATTGATGCTAGTTTGT+GGG - chr5_3:13569936-13569955 None:intergenic 35.0%
! TGGATATTGATGCTAGTTTG+TGG - chr5_3:13569937-13569956 None:intergenic 35.0%
! TCAAGATGTGACAACCATTT+TGG + chr5_3:13570015-13570034 Msa0800160:CDS 35.0%
AATTTGGATAACTACCACCA+AGG - chr5_3:13570447-13570466 None:intergenic 35.0%
! TTGGTGGTAGTTATCCAAAT+TGG + chr5_3:13570446-13570465 Msa0800160:intron 35.0%
! GGAACTTTAAAAGTTACGGA+AGG - chr5_3:13570493-13570512 None:intergenic 35.0%
! TTTAAAGTTCCTCAAGTGGA+AGG + chr5_3:13570502-13570521 Msa0800160:CDS 35.0%
TTAAAGTTCCTCAAGTGGAA+GGG + chr5_3:13570503-13570522 Msa0800160:CDS 35.0%
ATCTGATGTTGTGTTATCTG+GGG - chr5_3:13570569-13570588 None:intergenic 35.0%
CATCTGATGTTGTGTTATCT+GGG - chr5_3:13570570-13570589 None:intergenic 35.0%
AAAATGAACCTGTTGTTAGG+AGG + chr5_3:13570788-13570807 Msa0800160:CDS 35.0%
AATGTAGTTGAGTATTCTGG+GGG + chr5_3:13569104-13569123 Msa0800160:CDS 35.0%
TTCCAATACACATTTCCACT+CGG - chr5_3:13569183-13569202 None:intergenic 35.0%
TTAGGCAAGTTTGAAAAGTC+TGG - chr5_3:13569467-13569486 None:intergenic 35.0%
!! TGGAAGATTGTATTAGCCTT+CGG + chr5_3:13569576-13569595 Msa0800160:CDS 35.0%
CTTGTCAATCATTAAACACC+CGG - chr5_3:13569654-13569673 None:intergenic 35.0%
ATTTCTTTGTGCAGCTATGA+AGG + chr5_3:13569782-13569801 Msa0800160:CDS 35.0%
TTCCATCTATCATTCAGTCT+TGG + chr5_3:13569822-13569841 Msa0800160:CDS 35.0%
ATCCAAGACTGAATGATAGA+TGG - chr5_3:13569827-13569846 None:intergenic 35.0%
GGGGACTGAAAATTATTTGT+TGG - chr5_3:13569854-13569873 None:intergenic 35.0%
! AGTGGTAGATGTTTGAAATG+GGG - chr5_3:13569873-13569892 None:intergenic 35.0%
AGAAACTAGAGATGACATAG+TGG - chr5_3:13569891-13569910 None:intergenic 35.0%
AGTTTGTGGGAACTACTATA+TGG - chr5_3:13569923-13569942 None:intergenic 35.0%
! GGATATTGATGCTAGTTTGT+GGG - chr5_3:13569936-13569955 None:intergenic 35.0%
! TGGATATTGATGCTAGTTTG+TGG - chr5_3:13569937-13569956 None:intergenic 35.0%
! TCAAGATGTGACAACCATTT+TGG + chr5_3:13570015-13570034 Msa0800160:CDS 35.0%
AATTTGGATAACTACCACCA+AGG - chr5_3:13570447-13570466 None:intergenic 35.0%
! TTGGTGGTAGTTATCCAAAT+TGG + chr5_3:13570446-13570465 Msa0800160:intron 35.0%
! GGAACTTTAAAAGTTACGGA+AGG - chr5_3:13570493-13570512 None:intergenic 35.0%
! TTTAAAGTTCCTCAAGTGGA+AGG + chr5_3:13570502-13570521 Msa0800160:CDS 35.0%
TTAAAGTTCCTCAAGTGGAA+GGG + chr5_3:13570503-13570522 Msa0800160:CDS 35.0%
ATCTGATGTTGTGTTATCTG+GGG - chr5_3:13570569-13570588 None:intergenic 35.0%
CATCTGATGTTGTGTTATCT+GGG - chr5_3:13570570-13570589 None:intergenic 35.0%
AAAATGAACCTGTTGTTAGG+AGG + chr5_3:13570788-13570807 Msa0800160:CDS 35.0%
ACAAAATCTTCTCCAGGACT+CGG - chr5_3:13569071-13569090 None:intergenic 40.0%
! AGTCCTGGAGAAGATTTTGT+GGG + chr5_3:13569071-13569090 Msa0800160:CDS 40.0%
ATTCCCACAAAATCTTCTCC+AGG - chr5_3:13569077-13569096 None:intergenic 40.0%
TTTCCACACAACTTTGAGTG+GGG - chr5_3:13569220-13569239 None:intergenic 40.0%
CTTTCCACACAACTTTGAGT+GGG - chr5_3:13569221-13569240 None:intergenic 40.0%
TCTTTCCACACAACTTTGAG+TGG - chr5_3:13569222-13569241 None:intergenic 40.0%
AGTTGTGTGGAAAGAAACTC+AGG + chr5_3:13569227-13569246 Msa0800160:intron 40.0%
TTTGTGTCAGATGATGAGAG+TGG - chr5_3:13569442-13569461 None:intergenic 40.0%
TAGTACTCAAAGATTGTCCG+AGG + chr5_3:13569498-13569517 Msa0800160:CDS 40.0%
TGCGAAATCTCTAACAACCT+CGG - chr5_3:13569518-13569537 None:intergenic 40.0%
! AATGATTGACAAGTTGGAGG+AGG + chr5_3:13569661-13569680 Msa0800160:CDS 40.0%
!! AGTGTTATTTGCAAGCAGAG+TGG - chr5_3:13569711-13569730 None:intergenic 40.0%
TCAATATCCAAGAACCTTCC+AGG + chr5_3:13569947-13569966 Msa0800160:CDS 40.0%
TTCCAATTCCTTGGCATACA+AGG - chr5_3:13570044-13570063 None:intergenic 40.0%
TGGTTAACTTTCAGTTGCGA+AGG + chr5_3:13570466-13570485 Msa0800160:intron 40.0%
CCATCTGATGTTGTGTTATC+TGG - chr5_3:13570571-13570590 None:intergenic 40.0%
CCAGATAACACAACATCAGA+TGG + chr5_3:13570568-13570587 Msa0800160:CDS 40.0%
! CCACTCCTCATTTTCAAAAG+AGG - chr5_3:13570662-13570681 None:intergenic 40.0%
!! CCTCTTTTGAAAATGAGGAG+TGG + chr5_3:13570659-13570678 Msa0800160:CDS 40.0%
TATAGCACCTGGTAACAAAG+TGG + chr5_3:13570699-13570718 Msa0800160:CDS 40.0%
ACAAAATCTTCTCCAGGACT+CGG - chr5_3:13569071-13569090 None:intergenic 40.0%
! AGTCCTGGAGAAGATTTTGT+GGG + chr5_3:13569071-13569090 Msa0800160:CDS 40.0%
ATTCCCACAAAATCTTCTCC+AGG - chr5_3:13569077-13569096 None:intergenic 40.0%
TTTCCACACAACTTTGAGTG+GGG - chr5_3:13569220-13569239 None:intergenic 40.0%
CTTTCCACACAACTTTGAGT+GGG - chr5_3:13569221-13569240 None:intergenic 40.0%
TCTTTCCACACAACTTTGAG+TGG - chr5_3:13569222-13569241 None:intergenic 40.0%
AGTTGTGTGGAAAGAAACTC+AGG + chr5_3:13569227-13569246 Msa0800160:intron 40.0%
TTTGTGTCAGATGATGAGAG+TGG - chr5_3:13569442-13569461 None:intergenic 40.0%
TAGTACTCAAAGATTGTCCG+AGG + chr5_3:13569498-13569517 Msa0800160:CDS 40.0%
TGCGAAATCTCTAACAACCT+CGG - chr5_3:13569518-13569537 None:intergenic 40.0%
! AATGATTGACAAGTTGGAGG+AGG + chr5_3:13569661-13569680 Msa0800160:CDS 40.0%
!! AGTGTTATTTGCAAGCAGAG+TGG - chr5_3:13569711-13569730 None:intergenic 40.0%
TCAATATCCAAGAACCTTCC+AGG + chr5_3:13569947-13569966 Msa0800160:CDS 40.0%
TTCCAATTCCTTGGCATACA+AGG - chr5_3:13570044-13570063 None:intergenic 40.0%
TGGTTAACTTTCAGTTGCGA+AGG + chr5_3:13570466-13570485 Msa0800160:intron 40.0%
CCATCTGATGTTGTGTTATC+TGG - chr5_3:13570571-13570590 None:intergenic 40.0%
CCAGATAACACAACATCAGA+TGG + chr5_3:13570568-13570587 Msa0800160:CDS 40.0%
! CCACTCCTCATTTTCAAAAG+AGG - chr5_3:13570662-13570681 None:intergenic 40.0%
!! CCTCTTTTGAAAATGAGGAG+TGG + chr5_3:13570659-13570678 Msa0800160:CDS 40.0%
TATAGCACCTGGTAACAAAG+TGG + chr5_3:13570699-13570718 Msa0800160:CDS 40.0%
! GAGTCCTGGAGAAGATTTTG+TGG + chr5_3:13569070-13569089 Msa0800160:CDS 45.0%
!! CGAAGAACTTCTAGAGCTAG+CGG - chr5_3:13569134-13569153 None:intergenic 45.0%
AGCCGAGTGGAAATGTGTAT+TGG + chr5_3:13569178-13569197 Msa0800160:intron 45.0%
AATCCCCACTCAAAGTTGTG+TGG + chr5_3:13569214-13569233 Msa0800160:intron 45.0%
AAAGACTTCGAAGACCTGGA+AGG - chr5_3:13569964-13569983 None:intergenic 45.0%
ACACAAAGACTTCGAAGACC+TGG - chr5_3:13569968-13569987 None:intergenic 45.0%
AGGTCTTCGAAGTCTTTGTG+TGG + chr5_3:13569967-13569986 Msa0800160:CDS 45.0%
CGAAGTCTTTGTGTGGAGTA+CGG + chr5_3:13569974-13569993 Msa0800160:CDS 45.0%
! GGCATACAAGGCATCCAAAA+TGG - chr5_3:13570032-13570051 None:intergenic 45.0%
TTTGGATGCCTTGTATGCCA+AGG + chr5_3:13570033-13570052 Msa0800160:CDS 45.0%
TGCCTTGTATGCCAAGGAAT+TGG + chr5_3:13570039-13570058 Msa0800160:CDS 45.0%
! TGCAGCTGATTCCAATTCCT+TGG - chr5_3:13570053-13570072 None:intergenic 45.0%
TGCAGTCAAGTGCATGTTTC+AGG + chr5_3:13570121-13570140 Msa0800160:CDS 45.0%
TGTATGCATGCAAGTGAGAG+AGG - chr5_3:13570245-13570264 None:intergenic 45.0%
AATCTAGATATCAACGGCGC+TGG + chr5_3:13570409-13570428 Msa0800160:intron 45.0%
!!! TGGAGGTGGTGGTTGTTTTT+GGG + chr5_3:13570719-13570738 Msa0800160:CDS 45.0%
! GAGTCCTGGAGAAGATTTTG+TGG + chr5_3:13569070-13569089 Msa0800160:CDS 45.0%
!! CGAAGAACTTCTAGAGCTAG+CGG - chr5_3:13569134-13569153 None:intergenic 45.0%
AGCCGAGTGGAAATGTGTAT+TGG + chr5_3:13569178-13569197 Msa0800160:intron 45.0%
AATCCCCACTCAAAGTTGTG+TGG + chr5_3:13569214-13569233 Msa0800160:intron 45.0%
AAAGACTTCGAAGACCTGGA+AGG - chr5_3:13569964-13569983 None:intergenic 45.0%
ACACAAAGACTTCGAAGACC+TGG - chr5_3:13569968-13569987 None:intergenic 45.0%
AGGTCTTCGAAGTCTTTGTG+TGG + chr5_3:13569967-13569986 Msa0800160:CDS 45.0%
CGAAGTCTTTGTGTGGAGTA+CGG + chr5_3:13569974-13569993 Msa0800160:CDS 45.0%
! GGCATACAAGGCATCCAAAA+TGG - chr5_3:13570032-13570051 None:intergenic 45.0%
TTTGGATGCCTTGTATGCCA+AGG + chr5_3:13570033-13570052 Msa0800160:CDS 45.0%
TGCCTTGTATGCCAAGGAAT+TGG + chr5_3:13570039-13570058 Msa0800160:CDS 45.0%
! TGCAGCTGATTCCAATTCCT+TGG - chr5_3:13570053-13570072 None:intergenic 45.0%
TGCAGTCAAGTGCATGTTTC+AGG + chr5_3:13570121-13570140 Msa0800160:CDS 45.0%
TGTATGCATGCAAGTGAGAG+AGG - chr5_3:13570245-13570264 None:intergenic 45.0%
AATCTAGATATCAACGGCGC+TGG + chr5_3:13570409-13570428 Msa0800160:intron 45.0%
!!! TGGAGGTGGTGGTTGTTTTT+GGG + chr5_3:13570719-13570738 Msa0800160:CDS 45.0%
TACTTCTTGGAAGGCTCCGA+AGG - chr5_3:13569595-13569614 None:intergenic 50.0%
TCGAAGACCTGGAAGGTTCT+TGG - chr5_3:13569957-13569976 None:intergenic 50.0%
AAGTTTCGCCCTTCCACTTG+AGG - chr5_3:13570514-13570533 None:intergenic 50.0%
AGCACCTGGTAACAAAGTGG+AGG + chr5_3:13570702-13570721 Msa0800160:CDS 50.0%
ACCTGGTAACAAAGTGGAGG+TGG + chr5_3:13570705-13570724 Msa0800160:CDS 50.0%
ACCACCTCCACTTTGTTACC+AGG - chr5_3:13570709-13570728 None:intergenic 50.0%
TGGTAACAAAGTGGAGGTGG+TGG + chr5_3:13570708-13570727 Msa0800160:CDS 50.0%
!! GTGGAGGTGGTGGTTGTTTT+TGG + chr5_3:13570718-13570737 Msa0800160:CDS 50.0%
TCATATGTGGGCTCCACTTG+AGG - chr5_3:13570820-13570839 None:intergenic 50.0%
AGTGGAGCCCACATATGACT+TGG + chr5_3:13570822-13570841 Msa0800160:CDS 50.0%
TACTTCTTGGAAGGCTCCGA+AGG - chr5_3:13569595-13569614 None:intergenic 50.0%
TCGAAGACCTGGAAGGTTCT+TGG - chr5_3:13569957-13569976 None:intergenic 50.0%
AAGTTTCGCCCTTCCACTTG+AGG - chr5_3:13570514-13570533 None:intergenic 50.0%
AGCACCTGGTAACAAAGTGG+AGG + chr5_3:13570702-13570721 Msa0800160:CDS 50.0%
ACCTGGTAACAAAGTGGAGG+TGG + chr5_3:13570705-13570724 Msa0800160:CDS 50.0%
ACCACCTCCACTTTGTTACC+AGG - chr5_3:13570709-13570728 None:intergenic 50.0%
TGGTAACAAAGTGGAGGTGG+TGG + chr5_3:13570708-13570727 Msa0800160:CDS 50.0%
!! GTGGAGGTGGTGGTTGTTTT+TGG + chr5_3:13570718-13570737 Msa0800160:CDS 50.0%
TCATATGTGGGCTCCACTTG+AGG - chr5_3:13570820-13570839 None:intergenic 50.0%
AGTGGAGCCCACATATGACT+TGG + chr5_3:13570822-13570841 Msa0800160:CDS 50.0%
! CTAGATATCAACGGCGCTGG+TGG + chr5_3:13570412-13570431 Msa0800160:intron 55.0%
GCTGGTGGTTGTTTGCTCCT+TGG + chr5_3:13570427-13570446 Msa0800160:intron 55.0%
GGTGGTTGTTTGCTCCTTGG+TGG + chr5_3:13570430-13570449 Msa0800160:intron 55.0%
GGAGAGGTCCTCCTAACAAC+AGG - chr5_3:13570799-13570818 None:intergenic 55.0%
TAGGAGGACCTCTCCTCAAG+TGG + chr5_3:13570804-13570823 Msa0800160:CDS 55.0%
! CTAGATATCAACGGCGCTGG+TGG + chr5_3:13570412-13570431 Msa0800160:intron 55.0%
GCTGGTGGTTGTTTGCTCCT+TGG + chr5_3:13570427-13570446 Msa0800160:intron 55.0%
GGTGGTTGTTTGCTCCTTGG+TGG + chr5_3:13570430-13570449 Msa0800160:intron 55.0%
GGAGAGGTCCTCCTAACAAC+AGG - chr5_3:13570799-13570818 None:intergenic 55.0%
TAGGAGGACCTCTCCTCAAG+TGG + chr5_3:13570804-13570823 Msa0800160:CDS 55.0%
GCGTTCAAGCAACCGAGTCC+TGG + chr5_3:13569056-13569075 Msa0800160:CDS 60.0%
TTGAAAGGGGGGTAGCCGAG+TGG + chr5_3:13569165-13569184 Msa0800160:CDS 60.0%
TGTGGGCTCCACTTGAGGAG+AGG - chr5_3:13570815-13570834 None:intergenic 60.0%
GCGTTCAAGCAACCGAGTCC+TGG + chr5_3:13569056-13569075 Msa0800160:CDS 60.0%
TTGAAAGGGGGGTAGCCGAG+TGG + chr5_3:13569165-13569184 Msa0800160:CDS 60.0%
TGTGGGCTCCACTTGAGGAG+AGG - chr5_3:13570815-13570834 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 13569017 13570879 13569017 ID=Msa0800160;Name=Msa0800160
chr5_3 mRNA 13569017 13570879 13569017 ID=Msa0800160-mRNA-1;Parent=Msa0800160;Name=Msa0800160-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|1|1|3|0|434
chr5_3 exon 13569017 13569193 13569017 ID=Msa0800160-mRNA-1:exon:5583;Parent=Msa0800160-mRNA-1
chr5_3 exon 13569407 13570142 13569407 ID=Msa0800160-mRNA-1:exon:5584;Parent=Msa0800160-mRNA-1
chr5_3 exon 13570488 13570879 13570488 ID=Msa0800160-mRNA-1:exon:5585;Parent=Msa0800160-mRNA-1
chr5_3 CDS 13569017 13569193 13569017 ID=Msa0800160-mRNA-1:cds;Parent=Msa0800160-mRNA-1
chr5_3 CDS 13569407 13570142 13569407 ID=Msa0800160-mRNA-1:cds;Parent=Msa0800160-mRNA-1
chr5_3 CDS 13570488 13570879 13570488 ID=Msa0800160-mRNA-1:cds;Parent=Msa0800160-mRNA-1
Gene Sequence

>Msa0800160

ATGGATCAAAGTGAATCACTAGAGCTTTTTAGTTGGCATGCGTTCAAGCAACCGAGTCCTGGAGAAGATTTTGTGGGAATGTCCAAAAATGTAGTTGAGTATTCTGGGGGATTGCCGCTAGCTCTAGAAGTTCTTCGATCATATTTGTTTGAAAGGGGGGTAGCCGAGTGGAAATGTAAGATGGAGAAGCTAAAAATTCTCAATCTTAGCCACTCTCATCATCTGACACAAACTCCAGACTTTTCAAACTTGCCTAATCTTGAAAAGCTAGTACTCAAAGATTGTCCGAGGTTGTTAGAGATTTCGCATACTATAGGACTTATGAATAAAGTTCTTTTGATAAATTTGGAAGATTGTATTAGCCTTCGGAGCCTTCCAAGAAGTATATACAAGTTGAAATCTCTAAAATCTCTCATTCTTTCCGGGTGTTTAATGATTGACAAGTTGGAGGAGGACTTAGAACAGATGAAATCTTTAACCACTCTGCTTGCAAATAACACTGCAATAAAAAGAGTACCATTTTCATTAGTAAGGTCAAAAAGCATTGGATATATTTCTTTGTGCAGCTATGAAGGATTTTCGCGTGATGTGTTTCCATCTATCATTCAGTCTTGGATGTCACCAACAAATAATTTTCAGTCCCCATTTCAAACATCTACCACTATGTCATCTCTAGTTTCTTTAGATGTACCATATAGTAGTTCCCACAAACTAGCATCAATATCCAAGAACCTTCCAGGTCTTCGAAGTCTTTGTGTGGAGTACGGATCCAAACTTAGATTTTCTCAAGATGTGACAACCATTTTGGATGCCTTGTATGCCAAGGAATTGGAATCAGCTGCAACTACATCACAAGTATCAAATATAAACAATTCTGCATTAATTCAATTCTGCAGTCAAGTGCATGTTTCAGGTCCTTCCGTAACTTTTAAAGTTCCTCAAGTGGAAGGGCGAAACTTGAAGTCGATGATGTGCATTGTCTATACTTCAACCCCAGATAACACAACATCAGATGGACTAAAAAATCTGTTGGTGATAAATCACACAAAGACTACCATTCATCTCTACAAGAAAGAAGCATTAACCTCTTTTGAAAATGAGGAGTGGCAGAATATTGTATCAAATATAGCACCTGGTAACAAAGTGGAGGTGGTGGTTGTTTTTGGGAGCTATTTCATTGTCAAGAAAACCATAGTTTATCTCATATATGATGAAAATGAACCTGTTGTTAGGAGGACCTCTCCTCAAGTGGAGCCCACATATGACTTGGAAGAAAATAAAAAGAAGAAAATTCGTGTGGAATAA
Protein sequence

>Msa0800160

MDQSESLELFSWHAFKQPSPGEDFVGMSKNVVEYSGGLPLALEVLRSYLFERGVAEWKCKMEKLKILNLSHSHHLTQTPDFSNLPNLEKLVLKDCPRLLEISHTIGLMNKVLLINLEDCISLRSLPRSIYKLKSLKSLILSGCLMIDKLEEDLEQMKSLTTLLANNTAIKRVPFSLVRSKSIGYISLCSYEGFSRDVFPSIIQSWMSPTNNFQSPFQTSTTMSSLVSLDVPYSSSHKLASISKNLPGLRSLCVEYGSKLRFSQDVTTILDALYAKELESAATTSQVSNINNSALIQFCSQVHVSGPSVTFKVPQVEGRNLKSMMCIVYTSTPDNTTSDGLKNLLVINHTKTTIHLYKKEALTSFENEEWQNIVSNIAPGNKVEVVVVFGSYFIVKKTIVYLIYDENEPVVRRTSPQVEPTYDLEENKKKKIRVE*