AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0476820


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0476820 MtrunA17_Chr3g0137391 95.614 570 25 0 1 570 1 570 0.0 1142
Msa0476820 MtrunA17_Chr1g0209571 60.516 504 184 6 73 563 13 514 0.0 614
Msa0476820 MtrunA17_Chr6g0479571 56.026 307 117 7 263 563 3 297 4.89e-113 340
Msa0476820 MtrunA17_Chr6g0479561 54.082 98 45 0 143 240 67 164 2.58e-28 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0476820 AT2G31170.1 68.717 569 165 4 1 568 1 557 0.0 807
Msa0476820 AT2G31170.2 73.671 395 104 0 174 568 1 395 0.0 624
Msa0476820 AT2G31170.3 73.671 395 104 0 174 568 1 395 0.0 624
Msa0476820 AT5G38830.1 54.400 500 219 4 75 565 7 506 0.0 535
Msa0476820 AT3G56300.1 51.111 495 194 6 74 564 9 459 7.81e-166 481
Msa0476820 AT3G56300.2 48.861 395 158 5 174 564 1 355 2.44e-116 350
Msa0476820 AT3G56300.3 48.861 395 158 5 174 564 1 355 2.44e-116 350

Find 131 sgRNAs with CRISPR-Local

Find 486 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTATAATTCACATCTTTA+AGG 0.165551 3_3:+80720730 None:intergenic
CAAAACCAGGGGAGCCATTT+TGG 0.166704 3_3:-80724720 Msa0476820:CDS
CTTGATAATTTCCCATATTC+TGG 0.176323 3_3:+80724982 None:intergenic
TGTTCTTGGTATTGCTCTTA+TGG 0.231140 3_3:-80720900 Msa0476820:CDS
TCTCAATCATATCAATGATT+TGG 0.233087 3_3:+80725293 None:intergenic
CTCAATCATATCAATGATTT+GGG 0.245172 3_3:+80725294 None:intergenic
TGTTTACAGATTCTTAATAA+TGG 0.250507 3_3:-80725054 Msa0476820:intron
TCAATTTCGATCTTCTTTAC+AGG 0.252651 3_3:-80726720 Msa0476820:intron
CCCTGGGGTCCTGGAAGACC+TGG 0.266331 3_3:-80724691 Msa0476820:CDS
AACAGCTAAATCTTTCCTTA+TGG 0.285722 3_3:+80720919 None:intergenic
AGGAAAGATTTAGCTGTTCT+TGG 0.291942 3_3:-80720914 Msa0476820:CDS
TTTCCTTATGGAATCGGATT+TGG 0.302688 3_3:+80720931 None:intergenic
ATTATGAATATTCTACAAAA+AGG 0.310424 3_3:+80720618 None:intergenic
CGGCGCGGTAAGCGGGGATA+AGG 0.327966 3_3:+80726998 None:intergenic
ATAATAATTTGTCATTTCAT+TGG 0.329280 3_3:+80720590 None:intergenic
GTTTACAGATTCTTAATAAT+GGG 0.331846 3_3:-80725053 Msa0476820:intron
CCCCAGGGACTCTCCCAAAA+TGG 0.341414 3_3:+80724706 None:intergenic
ACAGTCCTTCGCCGGAAGTA+TGG 0.374888 3_3:-80726867 Msa0476820:CDS
GCTTATGATCTTAGCCATAT+TGG 0.374910 3_3:-80726760 Msa0476820:CDS
GACATTCCGGCCAATGCAAC+TGG 0.376927 3_3:+80723914 None:intergenic
AGTGAAGATGTCTAAATCTC+TGG 0.377209 3_3:-80724488 Msa0476820:CDS
CTCTCCCAAAATGGCTCCCC+TGG 0.385059 3_3:+80724715 None:intergenic
ATATGCCACCCAGGTCTTCC+AGG 0.386835 3_3:+80724682 None:intergenic
TGGGAGAGTCCCTGGGGTCC+TGG 0.391356 3_3:-80724700 Msa0476820:CDS
TAAATCTTTCCTTATGGAAT+CGG 0.394076 3_3:+80720925 None:intergenic
ACAATTCTGGTACAAGGATA+TGG 0.394848 3_3:-80720769 Msa0476820:three_prime_UTR
AAAAGTGGAAGCGACAATTC+TGG 0.399125 3_3:-80720782 Msa0476820:three_prime_UTR
AGCGAGAAGCGTGGTGGAAA+AGG 0.411291 3_3:+80727035 None:intergenic
ATTGCCAGATCGAAGGAGTT+AGG 0.417633 3_3:-80725427 Msa0476820:CDS
GTGTTGTGCAGCCATACTTC+CGG 0.419506 3_3:+80726856 None:intergenic
AAGACGGCGGCGCGGTAAGC+GGG 0.420794 3_3:+80726991 None:intergenic
GGCCTCCAAGTTGTGCCATT+CGG 0.423069 3_3:+80720872 None:intergenic
CAGCTTTGAAGAAAAGCATC+GGG 0.434560 3_3:-80721873 Msa0476820:CDS
GGCATGTGCTCAGACACTTT+CGG 0.434775 3_3:+80725316 None:intergenic
AAACACGAGCATGACCAATA+TGG 0.437195 3_3:+80726746 None:intergenic
CTTGAAGAAGATCGAAGAAC+GGG 0.438056 3_3:-80720981 Msa0476820:CDS
CCCAGGTCTTCCAGGACCCC+AGG 0.440253 3_3:+80724690 None:intergenic
GTTTGAGAAGAGACAGGGTA+AGG 0.442011 3_3:+80727067 None:intergenic
TGTAGTGTTTGAGAAGAGAC+AGG 0.448125 3_3:+80727061 None:intergenic
ATCCTCCTCCCAGCCATTCA+CGG 0.452178 3_3:-80726932 Msa0476820:CDS
CATGCCTTCAAGTTATTATG+AGG 0.452332 3_3:-80721827 Msa0476820:intron
GCTATGAGTGCAGCCTATCT+TGG 0.457755 3_3:-80724649 Msa0476820:CDS
CGCCGTGAATGGCTGGGAGG+AGG 0.460193 3_3:+80726930 None:intergenic
CACGGTCTGAAGCACTTTCA+AGG 0.460688 3_3:+80724252 None:intergenic
CATACCTCATAATAACTTGA+AGG 0.464665 3_3:+80721823 None:intergenic
AGACATCTTCACTGAGTCAA+TGG 0.468631 3_3:+80724498 None:intergenic
AGCAGCATGATCAGACAGTT+AGG 0.469945 3_3:-80724024 Msa0476820:CDS
TTCACATCTTTAAGGCATCA+AGG 0.477076 3_3:+80720738 None:intergenic
CCTGGGGTCCTGGAAGACCT+GGG 0.477470 3_3:-80724690 Msa0476820:CDS
CCCAAAGTGGAAAAGAAAGT+TGG 0.480236 3_3:-80726805 Msa0476820:CDS
CACACTCCAGTTGCATTGGC+CGG 0.482073 3_3:-80723920 Msa0476820:CDS
GATGAGACGGCGCGAAATGA+AGG 0.482579 3_3:+80726952 None:intergenic
AGAGGGTTGCTGTTGATTCA+AGG 0.486196 3_3:-80724930 Msa0476820:CDS
TAGCGTCGACTCAAACTGAT+TGG 0.488623 3_3:+80725397 None:intergenic
TAATTGTTTGCCTGCTACCG+TGG 0.490371 3_3:-80725341 Msa0476820:CDS
GTCAAAAGAGTAACCAAGAT+AGG 0.493768 3_3:+80724636 None:intergenic
CTCAGACACTTTCGGTTCCA+CGG 0.496291 3_3:+80725324 None:intergenic
TTCTCCTAACTCCTTCGATC+TGG 0.496608 3_3:+80725423 None:intergenic
CATAGTCGCAAGACACCAAT+GGG 0.496975 3_3:-80727093 Msa0476820:exon
GGCGCGGTAAGCGGGGATAA+GGG 0.498615 3_3:+80726999 None:intergenic
ATGCCAAATCCGATTCCATA+AGG 0.501426 3_3:-80720934 Msa0476820:CDS
GGGTATGCGTACAATGTTGA+TGG 0.506714 3_3:-80725033 Msa0476820:CDS
GTGTATATTAGAGTAGTTCA+TGG 0.507618 3_3:+80724274 None:intergenic
TTTCTCCGCCGTGAATGGCT+GGG 0.510810 3_3:+80726924 None:intergenic
CCGTTCAAACAGTCCTTCGC+CGG 0.511745 3_3:-80726875 Msa0476820:CDS
TTCTTGAAGTTGAAGAGGAA+TGG 0.514129 3_3:+80720847 None:intergenic
GTCCGAATGGCACAACTTGG+AGG 0.515578 3_3:-80720874 Msa0476820:CDS
GGATACTGCTCGAATACAAA+AGG 0.516654 3_3:-80720960 Msa0476820:CDS
ACTTTCGGTTCCACGGTAGC+AGG 0.520979 3_3:+80725331 None:intergenic
TGAAGTTGAAGAGGAATGGC+AGG 0.526649 3_3:+80720851 None:intergenic
AGTTGTTCTTGAAGTTGAAG+AGG 0.527353 3_3:+80720842 None:intergenic
TGTAGATGTTTACCATCCGT+TGG 0.528710 3_3:-80724336 Msa0476820:CDS
ATATTAAGATTTATTTGACT+CGG 0.530664 3_3:-80727181 None:intergenic
GCGAGAAGCGTGGTGGAAAA+GGG 0.530787 3_3:+80727036 None:intergenic
GTGAAGATGTCTAAATCTCT+GGG 0.535871 3_3:-80724487 Msa0476820:CDS
TTCCAAAGAGCAAAATCAGC+AGG 0.536604 3_3:+80724898 None:intergenic
TGCAGCCATACTTCCGGCGA+AGG 0.537454 3_3:+80726862 None:intergenic
ATAATACTCAAAGTATCTGA+TGG 0.549839 3_3:+80723989 None:intergenic
TCTTCACACTCCAGTTGCAT+TGG 0.552786 3_3:-80723924 Msa0476820:CDS
ATAGTCCGAATGGCACAACT+TGG 0.552969 3_3:-80720877 Msa0476820:CDS
GCAGCTTTGAAGAAAAGCAT+CGG 0.553637 3_3:-80721874 Msa0476820:CDS
TGGCTGGGAGGAGGATGAGA+CGG 0.555918 3_3:+80726939 None:intergenic
TGTATATTAGAGTAGTTCAT+GGG 0.559081 3_3:+80724275 None:intergenic
GCATGATCAGACAGTTAGGA+AGG 0.563775 3_3:-80724020 Msa0476820:CDS
GTAAAAGTGATATTAGTGTA+TGG 0.567475 3_3:-80724540 Msa0476820:CDS
ATTCTGCAGTCTACAAAACC+AGG 0.570306 3_3:-80724733 Msa0476820:intron
ACATAGTCGCAAGACACCAA+TGG 0.570777 3_3:-80727094 Msa0476820:exon
TCTTGAAGAAGATCGAAGAA+CGG 0.570790 3_3:-80720982 Msa0476820:CDS
GAAGACGGCGGCGCGGTAAG+CGG 0.572515 3_3:+80726990 None:intergenic
GCATGAGACCTAAAACAGTA+AGG 0.575572 3_3:+80721845 None:intergenic
CCAGGTCTTCCAGGACCCCA+GGG 0.580897 3_3:+80724691 None:intergenic
GGGGTCCTGGAAGACCTGGG+TGG 0.581557 3_3:-80724687 Msa0476820:CDS
AAAGTTGGAATGTATGTTTG+TGG 0.583676 3_3:-80726790 Msa0476820:CDS
TTTCATGGTGAGGAAATACA+AGG 0.585478 3_3:+80724593 None:intergenic
ACTCAAAGTATCTGATGGGA+CGG 0.591284 3_3:+80723994 None:intergenic
AAGATAATCGAGCTGGTGAG+AGG 0.592510 3_3:-80724948 Msa0476820:CDS
TAATACTCAAAGTATCTGAT+GGG 0.595853 3_3:+80723990 None:intergenic
CGACTTGCTGCATACTCGCA+AGG 0.595875 3_3:-80723870 Msa0476820:intron
CCGGCGAAGGACTGTTTGAA+CGG 0.597954 3_3:+80726875 None:intergenic
TTTGAGAAGAGACAGGGTAA+GGG 0.601002 3_3:+80727068 None:intergenic
GGTCTAGAAGATAATCGAGC+TGG 0.605311 3_3:-80724955 Msa0476820:CDS
TATCGACATGTGAGTGAACA+CGG 0.605447 3_3:+80727147 None:intergenic
AATCATTGATATGATTGAGA+AGG 0.605611 3_3:-80725290 Msa0476820:intron
GCTCTTATGGATAGTCCGAA+TGG 0.605818 3_3:-80720887 Msa0476820:CDS
AATATCTCAAAGCCAACGGA+TGG 0.606438 3_3:+80724324 None:intergenic
TAAGCGGGGATAAGGGTTCG+AGG 0.608060 3_3:+80727006 None:intergenic
AGATAATCGAGCTGGTGAGA+GGG 0.611949 3_3:-80724947 Msa0476820:CDS
CATAACAAACTTCAAATCCC+AGG 0.614122 3_3:+80726596 None:intergenic
GGTATGCGTACAATGTTGAT+GGG 0.615200 3_3:-80725032 Msa0476820:CDS
GTAGATAATTGCCAGATCGA+AGG 0.619483 3_3:-80725434 Msa0476820:intron
AGACGGCGGCGCGGTAAGCG+GGG 0.628758 3_3:+80726992 None:intergenic
CTGCATTCAATATGCCACCC+AGG 0.633143 3_3:+80724673 None:intergenic
TCAATTCAATAATGACCACC+AGG 0.634867 3_3:+80720663 None:intergenic
AGACGGCGCGAAATGAAGGA+AGG 0.638002 3_3:+80726956 None:intergenic
TCAATCATATCAATGATTTG+GGG 0.639781 3_3:+80725295 None:intergenic
TATGGGAAATTATCAAGTCG+AGG 0.642250 3_3:-80724976 Msa0476820:CDS
GACAGGGTAAGGGTACCCAT+TGG 0.643141 3_3:+80727078 None:intergenic
CTCCGCCGTGAATGGCTGGG+AGG 0.650126 3_3:+80726927 None:intergenic
GAAGCGACAATTCTGGTACA+AGG 0.657134 3_3:-80720775 Msa0476820:three_prime_UTR
GTAGTGTTTGAGAAGAGACA+GGG 0.658469 3_3:+80727062 None:intergenic
TTCTGCAGTCTACAAAACCA+GGG 0.665487 3_3:-80724732 Msa0476820:intron
TGAGTGAGCGAGAAGCGTGG+TGG 0.677483 3_3:+80727029 None:intergenic
ATCGACATGTGAGTGAACAC+GGG 0.694052 3_3:+80727148 None:intergenic
AGGTGAGTGAGCGAGAAGCG+TGG 0.702129 3_3:+80727026 None:intergenic
CTCCTCCCAGCCATTCACGG+CGG 0.706114 3_3:-80726929 Msa0476820:CDS
GTGAAGATCATCAGACATCG+AGG 0.721359 3_3:+80723940 None:intergenic
TCTGCAGTCTACAAAACCAG+GGG 0.721470 3_3:-80724731 Msa0476820:intron
CAAGGTCAATCCCTCCACCG+TGG 0.727954 3_3:+80724611 None:intergenic
ATTAGTGTATGGATGCACAA+TGG 0.730610 3_3:-80724529 Msa0476820:CDS
AGCTTTGAAGAAAAGCATCG+GGG 0.755856 3_3:-80721872 Msa0476820:CDS
GTATGCGTACAATGTTGATG+GGG 0.762396 3_3:-80725031 Msa0476820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAATTACGAAATTT+GGG + chr3_3:80722005-80722024 None:intergenic 10.0%
!!! AAATTTCGTAATTATTTTTT+GGG - chr3_3:80722005-80722024 Msa0476820:intron 10.0%
!!! TAAGATTTTAAAAAAAGTTT+GGG + chr3_3:80724786-80724805 None:intergenic 10.0%
!!! AAAATTTTCAATTTACATTT+AGG - chr3_3:80724959-80724978 Msa0476820:CDS 10.0%
!!! AAAAAAAAAAGTATCAATAA+AGG + chr3_3:80725328-80725347 None:intergenic 10.0%
!! GAGTAATAATATATTAAAAT+AGG - chr3_3:80726057-80726076 Msa0476820:intron 10.0%
!! AATAATATATTAAAATAGGT+TGG - chr3_3:80726061-80726080 Msa0476820:intron 10.0%
!!! GGAAAAAAAATGATTTTTTT+TGG - chr3_3:80721084-80721103 Msa0476820:intron 15.0%
!! AAAGATAAAATAATGTCAAA+AGG + chr3_3:80721515-80721534 None:intergenic 15.0%
!!! AAAACTAAGCAATTTTTTTT+AGG - chr3_3:80721947-80721966 Msa0476820:intron 15.0%
!!! AAACTAAGCAATTTTTTTTA+GGG - chr3_3:80721948-80721967 Msa0476820:intron 15.0%
!! CAAAAAATAATTACGAAATT+TGG + chr3_3:80722006-80722025 None:intergenic 15.0%
!!! CAAATTTCGTAATTATTTTT+TGG - chr3_3:80722004-80722023 Msa0476820:intron 15.0%
!!! AATTTCGTAATTATTTTTTG+GGG - chr3_3:80722006-80722025 Msa0476820:intron 15.0%
!!! TAAGTTTAAAATTTATAACG+AGG + chr3_3:80722929-80722948 None:intergenic 15.0%
!!! GTAAGATTTTAAAAAAAGTT+TGG + chr3_3:80724787-80724806 None:intergenic 15.0%
!!! TTCATAGACATTATATATTT+TGG - chr3_3:80724864-80724883 Msa0476820:intron 15.0%
!!! CTTTGTGAAATTTTTTTTTA+TGG - chr3_3:80724898-80724917 Msa0476820:CDS 15.0%
!! CATAATAGAAAATCAAAATT+TGG + chr3_3:80725109-80725128 None:intergenic 15.0%
!! TTCCAATTTGATTATAATTA+AGG + chr3_3:80725447-80725466 None:intergenic 15.0%
!! AATAGAAATTTGGAAAAATT+GGG + chr3_3:80726164-80726183 None:intergenic 15.0%
!! AAATAGAAATTTGGAAAAAT+TGG + chr3_3:80726165-80726184 None:intergenic 15.0%
!! ATTTCATATTATACAAGATA+AGG + chr3_3:80726667-80726686 None:intergenic 15.0%
!! AATTATAATTCACATCTTTA+AGG + chr3_3:80727020-80727039 None:intergenic 15.0%
!! ATTATGAATATTCTACAAAA+AGG + chr3_3:80727132-80727151 None:intergenic 15.0%
!!! ATAATAATTTGTCATTTCAT+TGG + chr3_3:80727160-80727179 None:intergenic 15.0%
!!! AATCATTTTTTTTCCCATTA+AGG + chr3_3:80721079-80721098 None:intergenic 20.0%
!!! TGATTTTTTTTGGTACTAAT+CGG - chr3_3:80721094-80721113 Msa0476820:intron 20.0%
!!! CATATGTTGTTATTATCATA+AGG + chr3_3:80721407-80721426 None:intergenic 20.0%
!! TCATAAACTATAATAGCTTA+TGG + chr3_3:80721466-80721485 None:intergenic 20.0%
!!! AATTTTCAAAATGCAAGTTT+TGG - chr3_3:80721764-80721783 Msa0476820:intron 20.0%
!! ATACATCATTAACTTATACA+GGG + chr3_3:80722062-80722081 None:intergenic 20.0%
!! CAAAATATGATTAAAAGAAC+GGG + chr3_3:80722175-80722194 None:intergenic 20.0%
!! CCAAAATATGATTAAAAGAA+CGG + chr3_3:80722176-80722195 None:intergenic 20.0%
!!! TTTAATCATATTTTGGAGTT+TGG - chr3_3:80722180-80722199 Msa0476820:intron 20.0%
!! AAAACTCTCAAAAATTCTTA+CGG + chr3_3:80722207-80722226 None:intergenic 20.0%
!! TGTTTACAGATTCTTAATAA+TGG - chr3_3:80722693-80722712 Msa0476820:intron 20.0%
!! GTTTACAGATTCTTAATAAT+GGG - chr3_3:80722694-80722713 Msa0476820:intron 20.0%
!! TAGAAAAATTTCCAGAATAT+GGG - chr3_3:80722754-80722773 Msa0476820:intron 20.0%
!!! ATAACTTCTATGATGTTTTT+CGG - chr3_3:80723783-80723802 Msa0476820:intron 20.0%
!!! AGTCGTTAATTAATTTTAGT+GGG + chr3_3:80723862-80723881 None:intergenic 20.0%
!!! AAGTCGTTAATTAATTTTAG+TGG + chr3_3:80723863-80723882 None:intergenic 20.0%
!! AATTATAAGAGAGAAAATTG+TGG - chr3_3:80724069-80724088 Msa0476820:intron 20.0%
!! TTGTTACATGATAGTAAATA+TGG - chr3_3:80724287-80724306 Msa0476820:CDS 20.0%
!! AAATTTCACAAAGTTTGAAA+GGG + chr3_3:80724891-80724910 None:intergenic 20.0%
!! AAAATTTCACAAAGTTTGAA+AGG + chr3_3:80724892-80724911 None:intergenic 20.0%
!!! TTTTTGATTGATTTTGAATG+AGG - chr3_3:80724998-80725017 Msa0476820:CDS 20.0%
!! GAACAAAAAACTATCAATAA+AGG + chr3_3:80725264-80725283 None:intergenic 20.0%
!! GTCCTTAATTATAATCAAAT+TGG - chr3_3:80725442-80725461 Msa0476820:intron 20.0%
!! ATAGAAATTTGGAAAAATTG+GGG + chr3_3:80726163-80726182 None:intergenic 20.0%
!!! TACATATCTTTTAAATCCTA+AGG + chr3_3:80726348-80726367 None:intergenic 20.0%
!! TAGGATTTAAAAGATATGTA+CGG - chr3_3:80726348-80726367 Msa0476820:intron 20.0%
!!! ATTATACAAGATAAGGTATT+AGG + chr3_3:80726660-80726679 None:intergenic 20.0%
!!! ATTATTCTTTTAAACCTTTG+TGG - chr3_3:80727106-80727125 Msa0476820:five_prime_UTR 20.0%
!!! GACTATGTTTTTTTGTGTTT+TGG + chr3_3:80720641-80720660 None:intergenic 25.0%
!!! CTTTGTGGTTTTGTATAAAT+TGG - chr3_3:80721274-80721293 Msa0476820:intron 25.0%
! TTATACAAGCTATACTACTA+AGG + chr3_3:80721317-80721336 None:intergenic 25.0%
!! TTAGTAGTATAGCTTGTATA+AGG - chr3_3:80721316-80721335 Msa0476820:intron 25.0%
! AAAGAAGTTATCGAAAATAG+AGG + chr3_3:80721660-80721679 None:intergenic 25.0%
!!! TCGATAACTTCTTTTAACTA+TGG - chr3_3:80721666-80721685 Msa0476820:intron 25.0%
!!! CTTTTAACTATGGTTTGATT+AGG - chr3_3:80721676-80721695 Msa0476820:intron 25.0%
! AATAGATTGTGTTTCAACAA+GGG + chr3_3:80721712-80721731 None:intergenic 25.0%
! TAATAGATTGTGTTTCAACA+AGG + chr3_3:80721713-80721732 None:intergenic 25.0%
! TTCAACTGTGTTACAATTAA+TGG + chr3_3:80721736-80721755 None:intergenic 25.0%
!!! TAGAGAGAAAAAGGTTTTAA+GGG - chr3_3:80721812-80721831 Msa0476820:intron 25.0%
! GATACATCATTAACTTATAC+AGG + chr3_3:80722063-80722082 None:intergenic 25.0%
!! CCGTTCTTTTAATCATATTT+TGG - chr3_3:80722173-80722192 Msa0476820:intron 25.0%
! TACTTTGAACTTGCAATAAA+AGG + chr3_3:80722238-80722257 None:intergenic 25.0%
! TCAATCATATCAATGATTTG+GGG + chr3_3:80722455-80722474 None:intergenic 25.0%
! CTCAATCATATCAATGATTT+GGG + chr3_3:80722456-80722475 None:intergenic 25.0%
! TCTCAATCATATCAATGATT+TGG + chr3_3:80722457-80722476 None:intergenic 25.0%
! AATCATTGATATGATTGAGA+AGG - chr3_3:80722457-80722476 Msa0476820:intron 25.0%
! CATAATAAAATGAACGACAA+TGG + chr3_3:80722485-80722504 None:intergenic 25.0%
!! CATTGTCGTTCATTTTATTA+TGG - chr3_3:80722483-80722502 Msa0476820:intron 25.0%
! GTAGAAAAATTTCCAGAATA+TGG - chr3_3:80722753-80722772 Msa0476820:intron 25.0%
! GTAAAAGTGATATTAGTGTA+TGG - chr3_3:80723207-80723226 Msa0476820:intron 25.0%
! ACAAATTAAGTCTAAACCAT+CGG + chr3_3:80723319-80723338 None:intergenic 25.0%
! ATTGTTTAGTATCATTCACA+AGG - chr3_3:80723347-80723366 Msa0476820:intron 25.0%
! AACATGAAATATTTGTGGAA+TGG + chr3_3:80723384-80723403 None:intergenic 25.0%
! ATTCCACAAATATTTCATGT+TGG - chr3_3:80723383-80723402 Msa0476820:intron 25.0%
! AAAAAATATCTCAAAGCCAA+CGG + chr3_3:80723430-80723449 None:intergenic 25.0%
! TGTATATTAGAGTAGTTCAT+GGG + chr3_3:80723475-80723494 None:intergenic 25.0%
! CCTCGTATATATAAAAAACA+CGG + chr3_3:80723516-80723535 None:intergenic 25.0%
!! TAATACTCAAAGTATCTGAT+GGG + chr3_3:80723760-80723779 None:intergenic 25.0%
!! ATAATACTCAAAGTATCTGA+TGG + chr3_3:80723761-80723780 None:intergenic 25.0%
!!! TAGGTTTTAAATCCATTAAG+AGG - chr3_3:80724234-80724253 Msa0476820:intron 25.0%
! TGAAATTCTCTACAATATCA+AGG + chr3_3:80724358-80724377 None:intergenic 25.0%
! TGTGGCAAAAAAATATCTAA+CGG - chr3_3:80724479-80724498 Msa0476820:CDS 25.0%
! TGTGGCAAAAAAATATCTAA+CGG + chr3_3:80724479-80724498 None:intergenic 25.0%
! AATTTCACAAAGTTTGAAAG+GGG + chr3_3:80724890-80724909 None:intergenic 25.0%
!! TTTGAAAATGGATCATTTTC+AGG - chr3_3:80725027-80725046 Msa0476820:CDS 25.0%
! CAAAAAACTATCAATAAAGG+TGG + chr3_3:80725261-80725280 None:intergenic 25.0%
! TTAGCAAAGGTTAAAGTAAA+GGG - chr3_3:80725626-80725645 Msa0476820:intron 25.0%
!!! TTAAAGTAAAGGGTATTTTG+TGG - chr3_3:80725636-80725655 Msa0476820:intron 25.0%
! ATCAACACAAATATTTCACA+TGG - chr3_3:80725778-80725797 Msa0476820:intron 25.0%
!!! TTTTTTCCCTGTAAAGATTA+TGG + chr3_3:80725828-80725847 None:intergenic 25.0%
! TAGAAATTTGGAAAAATTGG+GGG + chr3_3:80726162-80726181 None:intergenic 25.0%
! GCAAGAGTTAAATAGAAATT+TGG + chr3_3:80726174-80726193 None:intergenic 25.0%
! AATCTTGATGTTAAATCCAA+TGG + chr3_3:80726257-80726276 None:intergenic 25.0%
! TAAATCTTTCCTTATGGAAT+CGG + chr3_3:80726825-80726844 None:intergenic 25.0%
! TGCAAAGCAAAATAAAAAAG+TGG - chr3_3:80726950-80726969 Msa0476820:CDS 25.0%
! GATAAAAAAAAATTGTCACG+AGG - chr3_3:80727048-80727067 Msa0476820:CDS 25.0%
!!! AAGGTTGTTTTTTCTGAAGA+CGG + chr3_3:80720775-80720794 None:intergenic 30.0%
AAAGTTGGAATGTATGTTTG+TGG - chr3_3:80720957-80720976 Msa0476820:CDS 30.0%
TCAATTTCGATCTTCTTTAC+AGG - chr3_3:80721027-80721046 Msa0476820:CDS 30.0%
TCTTCAAGAACTTACCTTAA+TGG - chr3_3:80721062-80721081 Msa0476820:intron 30.0%
CTTCAAGAACTTACCTTAAT+GGG - chr3_3:80721063-80721082 Msa0476820:intron 30.0%
!! TCGGTTTTTGTTTGACAATT+AGG - chr3_3:80721113-80721132 Msa0476820:intron 30.0%
! TTTTACAGATGTAGATGACA+AGG - chr3_3:80721181-80721200 Msa0476820:intron 30.0%
TGTATAAATTGGCATCATTG+AGG - chr3_3:80721285-80721304 Msa0476820:intron 30.0%
!!! ACTTATTTTAGCTTTTCCGT+TGG - chr3_3:80721352-80721371 Msa0476820:intron 30.0%
ATAAGCTTGAAAACTGCTTA+TGG + chr3_3:80721441-80721460 None:intergenic 30.0%
TAATCAGCTGTTTATCCAAT+AGG - chr3_3:80721601-80721620 Msa0476820:intron 30.0%
AATCAGCTGTTTATCCAATA+GGG - chr3_3:80721602-80721621 Msa0476820:intron 30.0%
! GTAGAGAGAAAAAGGTTTTA+AGG - chr3_3:80721811-80721830 Msa0476820:intron 30.0%
!! TTTTCTTTTAGGGGTCTATT+AGG + chr3_3:80721974-80721993 None:intergenic 30.0%
AGACCCCTAAAAGAAAAATT+TGG - chr3_3:80721977-80721996 Msa0476820:intron 30.0%
GACCCCTAAAAGAAAAATTT+GGG - chr3_3:80721978-80721997 Msa0476820:intron 30.0%
ACCCCTAAAAGAAAAATTTG+GGG - chr3_3:80721979-80721998 Msa0476820:intron 30.0%
!!! TAATTATTTTTTGGGGCCTA+GGG - chr3_3:80722013-80722032 Msa0476820:intron 30.0%
AACTGAATGGTCAATAAACA+GGG + chr3_3:80722139-80722158 None:intergenic 30.0%
AAACTGAATGGTCAATAAAC+AGG + chr3_3:80722140-80722159 None:intergenic 30.0%
TCATAGGATAACAAACTGAA+TGG + chr3_3:80722152-80722171 None:intergenic 30.0%
ACAGGCAATTAAAAAGTAGT+GGG + chr3_3:80722261-80722280 None:intergenic 30.0%
AACAGGCAATTAAAAAGTAG+TGG + chr3_3:80722262-80722281 None:intergenic 30.0%
!! ACTTTTTAATTGCCTGTTAC+AGG - chr3_3:80722264-80722283 Msa0476820:intron 30.0%
GTACTCTTAGAAATGGAATA+TGG + chr3_3:80722554-80722573 None:intergenic 30.0%
CATGTAAGTACTCTTAGAAA+TGG + chr3_3:80722561-80722580 None:intergenic 30.0%
!! CATTTCTAAGAGTACTTACA+TGG - chr3_3:80722559-80722578 Msa0476820:intron 30.0%
TACTTACATGGATATGCTAT+TGG - chr3_3:80722571-80722590 Msa0476820:intron 30.0%
! CTATTATCAAGCTCTCTTTT+AGG - chr3_3:80722619-80722638 Msa0476820:intron 30.0%
! CTTGATAATTTCCCATATTC+TGG + chr3_3:80722768-80722787 None:intergenic 30.0%
! CTTTGGAAGGTATAAGATAT+TGG - chr3_3:80722864-80722883 Msa0476820:intron 30.0%
CAGAATATCATTGAAAATCC+AGG + chr3_3:80723000-80723019 None:intergenic 30.0%
! TCTGAGCAATTTCATTTTCA+TGG + chr3_3:80723172-80723191 None:intergenic 30.0%
AAATTAAGTCTAAACCATCG+GGG + chr3_3:80723317-80723336 None:intergenic 30.0%
CAAATTAAGTCTAAACCATC+GGG + chr3_3:80723318-80723337 None:intergenic 30.0%
GTGTATATTAGAGTAGTTCA+TGG + chr3_3:80723476-80723495 None:intergenic 30.0%
!!! CCGTGTTTTTTATATATACG+AGG - chr3_3:80723513-80723532 Msa0476820:intron 30.0%
!!! TTGGCAAGCATAATTTTTTC+AGG - chr3_3:80723596-80723615 Msa0476820:intron 30.0%
! TTTTCATATCTTCACACATC+AGG + chr3_3:80723913-80723932 None:intergenic 30.0%
AAGTGATAAACTAACTGTCA+TGG - chr3_3:80723988-80724007 Msa0476820:CDS 30.0%
ACATGTGTGGAGAAAATTTA+TGG - chr3_3:80724148-80724167 Msa0476820:intron 30.0%
CATGTGTGGAGAAAATTTAT+GGG - chr3_3:80724149-80724168 Msa0476820:intron 30.0%
TCAAATGGAGAATAGTACAA+TGG - chr3_3:80724181-80724200 Msa0476820:intron 30.0%
TACTACTAAGTTCCTCTTAA+TGG + chr3_3:80724249-80724268 None:intergenic 30.0%
! AAAGTTTGGGACAACAATTT+GGG + chr3_3:80724773-80724792 None:intergenic 30.0%
! AAAAGTTTGGGACAACAATT+TGG + chr3_3:80724774-80724793 None:intergenic 30.0%
! TTTTACCAATCCACTAGATT+GGG + chr3_3:80724820-80724839 None:intergenic 30.0%
ATGAGGTCAAAGTTTGAAAA+TGG - chr3_3:80725015-80725034 Msa0476820:CDS 30.0%
!!! AGGGTTTTAGATAAAAAGTG+AGG - chr3_3:80725166-80725185 Msa0476820:intron 30.0%
!!! GGGTTTTAGATAAAAAGTGA+GGG - chr3_3:80725167-80725186 Msa0476820:intron 30.0%
ACTTTAACCTTTGCTAAGAT+TGG + chr3_3:80725623-80725642 None:intergenic 30.0%
CTTAGCAAAGGTTAAAGTAA+AGG - chr3_3:80725625-80725644 Msa0476820:intron 30.0%
ACTTCAAAACTGTTATCTTG+TGG - chr3_3:80725725-80725744 Msa0476820:intron 30.0%
TCTAAGTCCATAATCTTTAC+AGG - chr3_3:80725818-80725837 Msa0476820:intron 30.0%
CTAAGTCCATAATCTTTACA+GGG - chr3_3:80725819-80725838 Msa0476820:intron 30.0%
CATACCTCATAATAACTTGA+AGG + chr3_3:80725927-80725946 None:intergenic 30.0%
!! TTAAAATAGGTTGGTGCTTA+CGG - chr3_3:80726070-80726089 Msa0476820:intron 30.0%
TGCTTACGGAAATAAGATTA+TGG - chr3_3:80726084-80726103 Msa0476820:intron 30.0%
GCTTACGGAAATAAGATTAT+GGG - chr3_3:80726085-80726104 Msa0476820:intron 30.0%
AGAAATTTGGAAAAATTGGG+GGG + chr3_3:80726161-80726180 None:intergenic 30.0%
TCTTGCATTGTGTGTTTAAA+TGG - chr3_3:80726188-80726207 Msa0476820:intron 30.0%
TGTTTAAATGGAGGTTTGTA+TGG - chr3_3:80726200-80726219 Msa0476820:intron 30.0%
ATTGGATGTCAATGTAAAAC+AGG + chr3_3:80726384-80726403 None:intergenic 30.0%
!!! GCAAAATAGTGGATTTTCAT+TGG + chr3_3:80726402-80726421 None:intergenic 30.0%
ACCAATTCTTTACGAAAATG+GGG + chr3_3:80726432-80726451 None:intergenic 30.0%
CACCAATTCTTTACGAAAAT+GGG + chr3_3:80726433-80726452 None:intergenic 30.0%
AATGCTAATATGCAAAGTTG+TGG - chr3_3:80726533-80726552 Msa0476820:intron 30.0%
ATGCTAATATGCAAAGTTGT+GGG - chr3_3:80726534-80726553 Msa0476820:intron 30.0%
AAATGTGTTGTCATGTAGAT+AGG - chr3_3:80726577-80726596 Msa0476820:CDS 30.0%
AACAGCTAAATCTTTCCTTA+TGG + chr3_3:80726831-80726850 None:intergenic 30.0%
!! AGAGATTTTTAAGCCCAAAG+TGG - chr3_3:80720929-80720948 Msa0476820:CDS 35.0%
! CCAACTTTCTTTTCCACTTT+GGG + chr3_3:80720945-80720964 None:intergenic 35.0%
! TCCAACTTTCTTTTCCACTT+TGG + chr3_3:80720946-80720965 None:intergenic 35.0%
GCTTATGATCTTAGCCATAT+TGG - chr3_3:80720987-80721006 Msa0476820:CDS 35.0%
CATAACAAACTTCAAATCCC+AGG + chr3_3:80721154-80721173 None:intergenic 35.0%
!! GCTTTCTAAAATCGAAGTTG+TGG + chr3_3:80721241-80721260 None:intergenic 35.0%
!! GCTATGTTGATGATTCTTTG+TGG - chr3_3:80721259-80721278 Msa0476820:intron 35.0%
TAAGCACATGTGAGACTATT+TGG - chr3_3:80721377-80721396 Msa0476820:intron 35.0%
AAGCACATGTGAGACTATTT+GGG - chr3_3:80721378-80721397 Msa0476820:intron 35.0%
! ATGTTTTACCAAGACCCTAT+TGG + chr3_3:80721619-80721638 None:intergenic 35.0%
! GCCCCAAATTTTTCTTTTAG+GGG + chr3_3:80721983-80722002 None:intergenic 35.0%
! GGCCCCAAATTTTTCTTTTA+GGG + chr3_3:80721984-80722003 None:intergenic 35.0%
!!! GTAATTATTTTTTGGGGCCT+AGG - chr3_3:80722012-80722031 Msa0476820:intron 35.0%
AATGGTCAATAAACAGGGAA+TGG + chr3_3:80722134-80722153 None:intergenic 35.0%
TGATTAAAAGAACGGGTCAT+AGG + chr3_3:80722168-80722187 None:intergenic 35.0%
!! TGAAGAGTTTTGTCAAGACA+TGG - chr3_3:80722376-80722395 Msa0476820:intron 35.0%
TATGGGAAATTATCAAGTCG+AGG - chr3_3:80722771-80722790 Msa0476820:intron 35.0%
! TGGAAGGTATAAGATATTGG+TGG - chr3_3:80722867-80722886 Msa0476820:intron 35.0%
! AGTTTGAAGCTTATCTATCC+TGG - chr3_3:80722979-80722998 Msa0476820:intron 35.0%
GTCAAAAGAGTAACCAAGAT+AGG + chr3_3:80723114-80723133 None:intergenic 35.0%
TTTCATGGTGAGGAAATACA+AGG + chr3_3:80723157-80723176 None:intergenic 35.0%
! GCAATTTCATTTTCATGGTG+AGG + chr3_3:80723167-80723186 None:intergenic 35.0%
ATTAGTGTATGGATGCACAA+TGG - chr3_3:80723218-80723237 Msa0476820:intron 35.0%
AGTGAAGATGTCTAAATCTC+TGG - chr3_3:80723259-80723278 Msa0476820:intron 35.0%
GTGAAGATGTCTAAATCTCT+GGG - chr3_3:80723260-80723279 Msa0476820:intron 35.0%
!!! TGGGAAACTTTTTCACGATA+CGG - chr3_3:80723279-80723298 Msa0476820:intron 35.0%
CTGCCAACATGAAATATTTG+TGG + chr3_3:80723389-80723408 None:intergenic 35.0%
CACAAATATTTCATGTTGGC+AGG - chr3_3:80723387-80723406 Msa0476820:intron 35.0%
AATTATGCTTGCCAATTGCA+TGG + chr3_3:80723591-80723610 None:intergenic 35.0%
TGGAAATGAGAATGTTGAAG+TGG - chr3_3:80724008-80724027 Msa0476820:CDS 35.0%
AGAATGTTGAAGTGGATAAG+TGG - chr3_3:80724016-80724035 Msa0476820:CDS 35.0%
ACATGAAAGAATCTCGTCTT+AGG - chr3_3:80724110-80724129 Msa0476820:intron 35.0%
TGTGGAGAAAATTTATGGGA+GGG - chr3_3:80724153-80724172 Msa0476820:intron 35.0%
GAGAATAGTACAATGGTTAG+AGG - chr3_3:80724188-80724207 Msa0476820:intron 35.0%
GGGAGATCAAGAAAAGTTAT+AGG - chr3_3:80724215-80724234 Msa0476820:intron 35.0%
!! ATGGTGTTGTCTAATCCATA+CGG - chr3_3:80724306-80724325 Msa0476820:CDS 35.0%
AAGCTCCATTTACTCCATTT+AGG - chr3_3:80724440-80724459 Msa0476820:intron 35.0%
AGCTCCATTTACTCCATTTA+GGG - chr3_3:80724441-80724460 Msa0476820:intron 35.0%
CAAACCCTAAATGGAGTAAA+TGG + chr3_3:80724448-80724467 None:intergenic 35.0%
! CATTTACTCCATTTAGGGTT+TGG - chr3_3:80724446-80724465 Msa0476820:intron 35.0%
TGTTGTGATATGAGAGAAGA+AGG - chr3_3:80724534-80724553 Msa0476820:CDS 35.0%
GTTGTGATATGAGAGAAGAA+GGG - chr3_3:80724535-80724554 Msa0476820:CDS 35.0%
TAAATGGAGCTTAGCCTAAA+TGG - chr3_3:80724679-80724698 Msa0476820:CDS 35.0%
CGGAAAGATAAAAACCTTGA+CGG - chr3_3:80724734-80724753 Msa0476820:intron 35.0%
! GTTTTACCAATCCACTAGAT+TGG + chr3_3:80724821-80724840 None:intergenic 35.0%
! ATGTTTTGTGTGCAATGATG+TGG - chr3_3:80725058-80725077 Msa0476820:intron 35.0%
! TGTTTTGTGTGCAATGATGT+GGG - chr3_3:80725059-80725078 Msa0476820:intron 35.0%
TTGGTTCACGTTGAACTATA+GGG - chr3_3:80725147-80725166 Msa0476820:intron 35.0%
!! AGGGCTTTGAATTGTGATTA+TGG - chr3_3:80725204-80725223 Msa0476820:intron 35.0%
! TTTTGTATCATTTCACTGCG+AGG + chr3_3:80725294-80725313 None:intergenic 35.0%
!!! TTTTTTGTTCTAGAGAGCCT+AGG - chr3_3:80725274-80725293 Msa0476820:intron 35.0%
GGACATTGTTTGATATGCTA+GGG + chr3_3:80725426-80725445 None:intergenic 35.0%
AGGACATTGTTTGATATGCT+AGG + chr3_3:80725427-80725446 None:intergenic 35.0%
CTTTGCTAAGATTGGATCAT+TGG + chr3_3:80725615-80725634 None:intergenic 35.0%
CAATGATCCAATCTTAGCAA+AGG - chr3_3:80725613-80725632 Msa0476820:intron 35.0%
ACTACATTAGAGACTTCCAA+TGG - chr3_3:80725692-80725711 Msa0476820:intron 35.0%
TGAAGTTACACTTCTACCAT+TGG + chr3_3:80725711-80725730 None:intergenic 35.0%
! CATGCCTTCAAGTTATTATG+AGG - chr3_3:80725920-80725939 Msa0476820:intron 35.0%
TGCATTGTGTGTTTAAATGG+AGG - chr3_3:80726191-80726210 Msa0476820:intron 35.0%
!! GTTTGTATGGCGTTATTTTG+TGG - chr3_3:80726213-80726232 Msa0476820:intron 35.0%
CCAATGGTTAATAATGCAGA+GGG + chr3_3:80726241-80726260 None:intergenic 35.0%
TCCAATGGTTAATAATGCAG+AGG + chr3_3:80726242-80726261 None:intergenic 35.0%
GCGGCAATAATATCAAATGT+GGG + chr3_3:80726283-80726302 None:intergenic 35.0%
! TCTGAAGTTACTTCAACACA+AGG - chr3_3:80726307-80726326 Msa0476820:intron 35.0%
CTGAAGTTACTTCAACACAA+GGG - chr3_3:80726308-80726327 Msa0476820:intron 35.0%
GGTGACATAATATTCTCCTT+AGG - chr3_3:80726329-80726348 Msa0476820:intron 35.0%
! ACCCCATTTTCGTAAAGAAT+TGG - chr3_3:80726428-80726447 Msa0476820:intron 35.0%
CCACCAATTCTTTACGAAAA+TGG + chr3_3:80726434-80726453 None:intergenic 35.0%
! CCATTTTCGTAAAGAATTGG+TGG - chr3_3:80726431-80726450 Msa0476820:intron 35.0%
CAAAGTTGTGGGATAGTATA+TGG - chr3_3:80726545-80726564 Msa0476820:intron 35.0%
CATGACAACACATTTCTGTA+TGG + chr3_3:80726572-80726591 None:intergenic 35.0%
ATCTAATCAATGTCATGCAC+AGG - chr3_3:80726685-80726704 Msa0476820:intron 35.0%
TCTTGAAGAAGATCGAAGAA+CGG - chr3_3:80726765-80726784 Msa0476820:CDS 35.0%
TTTCCTTATGGAATCGGATT+TGG + chr3_3:80726819-80726838 None:intergenic 35.0%
AGGAAAGATTTAGCTGTTCT+TGG - chr3_3:80726833-80726852 Msa0476820:CDS 35.0%
TGTTCTTGGTATTGCTCTTA+TGG - chr3_3:80726847-80726866 Msa0476820:CDS 35.0%
TTCTTGAAGTTGAAGAGGAA+TGG + chr3_3:80726903-80726922 None:intergenic 35.0%
AGTTGTTCTTGAAGTTGAAG+AGG + chr3_3:80726908-80726927 None:intergenic 35.0%
ACAATTCTGGTACAAGGATA+TGG - chr3_3:80726978-80726997 Msa0476820:CDS 35.0%
!! TTCACATCTTTAAGGCATCA+AGG + chr3_3:80727012-80727031 None:intergenic 35.0%
TCAATTCAATAATGACCACC+AGG + chr3_3:80727087-80727106 None:intergenic 35.0%
ATTCTACAAAAAGGCCACAA+AGG + chr3_3:80727123-80727142 None:intergenic 35.0%
TATCGACATGTGAGTGAACA+CGG + chr3_3:80720603-80720622 None:intergenic 40.0%
TTTGAGAAGAGACAGGGTAA+GGG + chr3_3:80720682-80720701 None:intergenic 40.0%
GTAGTGTTTGAGAAGAGACA+GGG + chr3_3:80720688-80720707 None:intergenic 40.0%
TGTAGTGTTTGAGAAGAGAC+AGG + chr3_3:80720689-80720708 None:intergenic 40.0%
!!! GTTGTTTTTTCTGAAGACGG+CGG + chr3_3:80720772-80720791 None:intergenic 40.0%
CCCAAAGTGGAAAAGAAAGT+TGG - chr3_3:80720942-80720961 Msa0476820:CDS 40.0%
AAACACGAGCATGACCAATA+TGG + chr3_3:80721004-80721023 None:intergenic 40.0%
!! AGGCAGATATTTTAAGCACC+TGG - chr3_3:80721133-80721152 Msa0476820:intron 40.0%
!! GGCAGATATTTTAAGCACCT+GGG - chr3_3:80721134-80721153 Msa0476820:intron 40.0%
AAAATCGAAGTTGTGGCAAC+TGG + chr3_3:80721234-80721253 None:intergenic 40.0%
! TAGCTTGTATAAGGCGTATC+TGG - chr3_3:80721325-80721344 Msa0476820:intron 40.0%
CTGTTTATCCAATAGGGTCT+TGG - chr3_3:80721608-80721627 Msa0476820:intron 40.0%
GGGTCTTGGTAAAACATCTT+CGG - chr3_3:80721622-80721641 Msa0476820:intron 40.0%
AACATCTTCGGCTGATTACT+AGG - chr3_3:80721634-80721653 Msa0476820:intron 40.0%
! TTTAGCTGCTTTACACTGAG+TGG - chr3_3:80721789-80721808 Msa0476820:intron 40.0%
ACTGAGTGGTAGAGAGAAAA+AGG - chr3_3:80721803-80721822 Msa0476820:intron 40.0%
!!! GTTTTAAGGGAGTCCTCAAT+GGG - chr3_3:80721825-80721844 Msa0476820:intron 40.0%
TCCTCAATGGGTATAAGTTC+AGG - chr3_3:80721837-80721856 Msa0476820:CDS 40.0%
CCTCAATGGGTATAAGTTCA+GGG - chr3_3:80721838-80721857 Msa0476820:CDS 40.0%
CTAGGGCGAACATACAATAT+GGG - chr3_3:80721883-80721902 Msa0476820:CDS 40.0%
! GGGCCCCAAATTTTTCTTTT+AGG + chr3_3:80721985-80722004 None:intergenic 40.0%
GCATACTAAGATCCTGTAAC+AGG + chr3_3:80722279-80722298 None:intergenic 40.0%
GTAGATAATTGCCAGATCGA+AGG - chr3_3:80722313-80722332 Msa0476820:intron 40.0%
GGTATGCGTACAATGTTGAT+GGG - chr3_3:80722715-80722734 Msa0476820:intron 40.0%
GTATGCGTACAATGTTGATG+GGG - chr3_3:80722716-80722735 Msa0476820:intron 40.0%
!!! ATCCTGCTGATTTTGCTCTT+TGG - chr3_3:80722847-80722866 Msa0476820:intron 40.0%
TTCCAAAGAGCAAAATCAGC+AGG + chr3_3:80722852-80722871 None:intergenic 40.0%
!!! TGCTGATTTTGCTCTTTGGA+AGG - chr3_3:80722851-80722870 Msa0476820:intron 40.0%
ATTCTGCAGTCTACAAAACC+AGG - chr3_3:80723014-80723033 Msa0476820:intron 40.0%
TTCTGCAGTCTACAAAACCA+GGG - chr3_3:80723015-80723034 Msa0476820:intron 40.0%
! GGTTACTCTTTTGACATCCA+CGG - chr3_3:80723119-80723138 Msa0476820:intron 40.0%
AGACATCTTCACTGAGTCAA+TGG + chr3_3:80723252-80723271 None:intergenic 40.0%
!!! AAACTTTTTCACGATACGGC+AGG - chr3_3:80723283-80723302 Msa0476820:intron 40.0%
TGTAGATGTTTACCATCCGT+TGG - chr3_3:80723411-80723430 Msa0476820:intron 40.0%
AATATCTCAAAGCCAACGGA+TGG + chr3_3:80723426-80723445 None:intergenic 40.0%
! ACTCAAAGTATCTGATGGGA+CGG + chr3_3:80723756-80723775 None:intergenic 40.0%
!! TTTTAGTGGGTCAGACATTC+CGG + chr3_3:80723849-80723868 None:intergenic 40.0%
CTATCTCGCTCTTTCATCAT+AGG - chr3_3:80723960-80723979 Msa0476820:CDS 40.0%
TGAAAGAATCTCGTCTTAGG+TGG - chr3_3:80724113-80724132 Msa0476820:intron 40.0%
! GTTTGGAGTTTGAACATGTG+TGG - chr3_3:80724135-80724154 Msa0476820:intron 40.0%
GTGTGGAGAAAATTTATGGG+AGG - chr3_3:80724152-80724171 Msa0476820:intron 40.0%
GTGGAGAAAATTTATGGGAG+GGG - chr3_3:80724154-80724173 Msa0476820:intron 40.0%
TAGAGAATTTCAGTCAAGCG+CGG - chr3_3:80724366-80724385 Msa0476820:intron 40.0%
AGTTCGGGTATGCTCTATTT+AGG - chr3_3:80724415-80724434 Msa0476820:intron 40.0%
TCTTGCATCCAAACCCTAAA+TGG + chr3_3:80724457-80724476 None:intergenic 40.0%
CATTTACTCCATTCAGGGTT+TGG + chr3_3:80724665-80724684 None:intergenic 40.0%
CAAACCCTGAATGGAGTAAA+TGG - chr3_3:80724663-80724682 Msa0476820:CDS 40.0%
AGCTCCATTTACTCCATTCA+GGG + chr3_3:80724670-80724689 None:intergenic 40.0%
AAGCTCCATTTACTCCATTC+AGG + chr3_3:80724671-80724690 None:intergenic 40.0%
ACACAACTACGATTGGAGTT+CGG + chr3_3:80724712-80724731 None:intergenic 40.0%
GCATATCTACCAATCCATCT+TGG - chr3_3:80725128-80725147 Msa0476820:intron 40.0%
TAGTTCAACGTGAACCAAGA+TGG + chr3_3:80725145-80725164 None:intergenic 40.0%
CTTGGTTCACGTTGAACTAT+AGG - chr3_3:80725146-80725165 Msa0476820:intron 40.0%
TGTTTGATATGCTAGGGCAT+GGG + chr3_3:80725420-80725439 None:intergenic 40.0%
TTGTTTGATATGCTAGGGCA+TGG + chr3_3:80725421-80725440 None:intergenic 40.0%
!! GCAGCTTTGAAGAAAAGCAT+CGG - chr3_3:80725873-80725892 Msa0476820:intron 40.0%
!! CAGCTTTGAAGAAAAGCATC+GGG - chr3_3:80725874-80725893 Msa0476820:intron 40.0%
!! AGCTTTGAAGAAAAGCATCG+GGG - chr3_3:80725875-80725894 Msa0476820:intron 40.0%
GCATGAGACCTAAAACAGTA+AGG + chr3_3:80725905-80725924 None:intergenic 40.0%
CGGAAATAAGATTATGGGTG+CGG - chr3_3:80726090-80726109 Msa0476820:intron 40.0%
GGAAATAAGATTATGGGTGC+GGG - chr3_3:80726091-80726110 Msa0476820:intron 40.0%
GAAATAAGATTATGGGTGCG+GGG - chr3_3:80726092-80726111 Msa0476820:intron 40.0%
CCCTCTGCATTATTAACCAT+TGG - chr3_3:80726238-80726257 Msa0476820:intron 40.0%
GGCGGCAATAATATCAAATG+TGG + chr3_3:80726284-80726303 None:intergenic 40.0%
CATTTGATATTATTGCCGCC+TGG - chr3_3:80726284-80726303 Msa0476820:intron 40.0%
TGTTGAAGTAACTTCAGACC+AGG + chr3_3:80726305-80726324 None:intergenic 40.0%
TTTACGAAAATGGGGTGATG+TGG + chr3_3:80726424-80726443 None:intergenic 40.0%
! AAAGAATTGGTGGCATGACA+TGG - chr3_3:80726441-80726460 Msa0476820:intron 40.0%
TCGCACACACAGAATATGTA+GGG + chr3_3:80726618-80726637 None:intergenic 40.0%
! ACAGGTTTTACAGCAGCTTA+AGG - chr3_3:80726703-80726722 Msa0476820:intron 40.0%
CTTGAAGAAGATCGAAGAAC+GGG - chr3_3:80726766-80726785 Msa0476820:CDS 40.0%
GGATACTGCTCGAATACAAA+AGG - chr3_3:80726787-80726806 Msa0476820:CDS 40.0%
ATGCCAAATCCGATTCCATA+AGG - chr3_3:80726813-80726832 Msa0476820:CDS 40.0%
AAAAGTGGAAGCGACAATTC+TGG - chr3_3:80726965-80726984 Msa0476820:CDS 40.0%
ATCGACATGTGAGTGAACAC+GGG + chr3_3:80720602-80720621 None:intergenic 45.0%
ACATAGTCGCAAGACACCAA+TGG - chr3_3:80720653-80720672 Msa0476820:three_prime_UTR 45.0%
CATAGTCGCAAGACACCAAT+GGG - chr3_3:80720654-80720673 Msa0476820:three_prime_UTR 45.0%
GTTTGAGAAGAGACAGGGTA+AGG + chr3_3:80720683-80720702 None:intergenic 45.0%
! GAATTTTTCTCCGCCGTGAA+TGG + chr3_3:80720831-80720850 None:intergenic 45.0%
GCGGAGAAAAATTCTCACGA+CGG - chr3_3:80720837-80720856 Msa0476820:exon 45.0%
GAGAAAAATTCTCACGACGG+TGG - chr3_3:80720840-80720859 Msa0476820:CDS 45.0%
CTCACATGTGCTTATGCCAA+CGG + chr3_3:80721371-80721390 None:intergenic 45.0%
!!! GGTTTTAAGGGAGTCCTCAA+TGG - chr3_3:80721824-80721843 Msa0476820:intron 45.0%
CCCTGAACTTATACCCATTG+AGG + chr3_3:80721841-80721860 None:intergenic 45.0%
GGCCACCAAAATCTCAGAAA+CGG + chr3_3:80721864-80721883 None:intergenic 45.0%
!!! TTCTGAGATTTTGGTGGCCT+AGG - chr3_3:80721865-80721884 Msa0476820:CDS 45.0%
!! TCTGAGATTTTGGTGGCCTA+GGG - chr3_3:80721866-80721885 Msa0476820:CDS 45.0%
CCATATTGTATGTTCGCCCT+AGG + chr3_3:80721885-80721904 None:intergenic 45.0%
CCTAGGGCGAACATACAATA+TGG - chr3_3:80721882-80721901 Msa0476820:CDS 45.0%
!!! TTATTTTTTGGGGCCTAGGG+CGG - chr3_3:80722016-80722035 Msa0476820:intron 45.0%
ATTGCCAGATCGAAGGAGTT+AGG - chr3_3:80722320-80722339 Msa0476820:intron 45.0%
TTCTCCTAACTCCTTCGATC+TGG + chr3_3:80722327-80722346 None:intergenic 45.0%
!! TAGCGTCGACTCAAACTGAT+TGG + chr3_3:80722353-80722372 None:intergenic 45.0%
TAATTGTTTGCCTGCTACCG+TGG - chr3_3:80722406-80722425 Msa0476820:intron 45.0%
GGGTATGCGTACAATGTTGA+TGG - chr3_3:80722714-80722733 Msa0476820:intron 45.0%
GGTCTAGAAGATAATCGAGC+TGG - chr3_3:80722792-80722811 Msa0476820:intron 45.0%
AAGATAATCGAGCTGGTGAG+AGG - chr3_3:80722799-80722818 Msa0476820:intron 45.0%
AGATAATCGAGCTGGTGAGA+GGG - chr3_3:80722800-80722819 Msa0476820:intron 45.0%
!! AGAGGGTTGCTGTTGATTCA+AGG - chr3_3:80722817-80722836 Msa0476820:intron 45.0%
TCTGCAGTCTACAAAACCAG+GGG - chr3_3:80723016-80723035 Msa0476820:intron 45.0%
!! AAAACCAGGGGAGCCATTTT+GGG - chr3_3:80723028-80723047 Msa0476820:intron 45.0%
! TACTCTTTTGACATCCACGG+TGG - chr3_3:80723122-80723141 Msa0476820:intron 45.0%
! TGTGCCATTGTCCATGCAAT+TGG - chr3_3:80723577-80723596 Msa0476820:intron 45.0%
CTTGCCAATTGCATGGACAA+TGG + chr3_3:80723584-80723603 None:intergenic 45.0%
AGCAGCATGATCAGACAGTT+AGG - chr3_3:80723723-80723742 Msa0476820:intron 45.0%
GCATGATCAGACAGTTAGGA+AGG - chr3_3:80723727-80723746 Msa0476820:intron 45.0%
GTGAAGATCATCAGACATCG+AGG + chr3_3:80723810-80723829 None:intergenic 45.0%
TCTTCACACTCCAGTTGCAT+TGG - chr3_3:80723823-80723842 Msa0476820:intron 45.0%
GAATCTCGTCTTAGGTGGTT+TGG - chr3_3:80724118-80724137 Msa0476820:intron 45.0%
! TATGGGAGGGGTTGATCAAA+TGG - chr3_3:80724166-80724185 Msa0476820:intron 45.0%
AGTACAATGGTTAGAGGCAG+AGG - chr3_3:80724194-80724213 Msa0476820:intron 45.0%
GTACAATGGTTAGAGGCAGA+GGG - chr3_3:80724195-80724214 Msa0476820:intron 45.0%
TTGTCTAATCCATACGGCCA+AGG - chr3_3:80724312-80724331 Msa0476820:CDS 45.0%
TGTCTAATCCATACGGCCAA+GGG - chr3_3:80724313-80724332 Msa0476820:CDS 45.0%
GATTTAAACCCTTGGCCGTA+TGG + chr3_3:80724324-80724343 None:intergenic 45.0%
TCTTGCATCCAAACCCTGAA+TGG - chr3_3:80724654-80724673 Msa0476820:CDS 45.0%
AGTTCGGGTATGCTCCATTT+AGG + chr3_3:80724696-80724715 None:intergenic 45.0%
CACAACTACGATTGGAGTTC+GGG + chr3_3:80724711-80724730 None:intergenic 45.0%
CTCCAATCGTAGTTGTGTTG+CGG - chr3_3:80724714-80724733 Msa0476820:CDS 45.0%
TTCCGCAACACAACTACGAT+TGG + chr3_3:80724719-80724738 None:intergenic 45.0%
ATGTAGCTGACCCAATCTAG+TGG - chr3_3:80724807-80724826 Msa0476820:intron 45.0%
CAACGTGAACCAAGATGGAT+TGG + chr3_3:80725140-80725159 None:intergenic 45.0%
TGAGGGAAGAGAGAGAAACA+AGG - chr3_3:80725184-80725203 Msa0476820:intron 45.0%
GAGGGAAGAGAGAGAAACAA+GGG - chr3_3:80725185-80725204 Msa0476820:intron 45.0%
! CGTGTGTAAGTTTTGCTCCT+AGG + chr3_3:80725362-80725381 None:intergenic 45.0%
TGCTGAGAAGTGGAGATTTC+CGG - chr3_3:80725387-80725406 Msa0476820:CDS 45.0%
! GGGGATGTCCTTACTGTTTT+AGG - chr3_3:80725894-80725913 Msa0476820:intron 45.0%
TGAAGTAACTTCAGACCAGG+CGG + chr3_3:80726302-80726321 None:intergenic 45.0%
GGTGGCATGACATGGAAAAA+TGG - chr3_3:80726449-80726468 Msa0476820:intron 45.0%
GTCATGTAGATAGGTGTGAG+TGG - chr3_3:80726586-80726605 Msa0476820:CDS 45.0%
GTCGCACACACAGAATATGT+AGG + chr3_3:80726619-80726638 None:intergenic 45.0%
GCTCTTATGGATAGTCCGAA+TGG - chr3_3:80726860-80726879 Msa0476820:CDS 45.0%
ATAGTCCGAATGGCACAACT+TGG - chr3_3:80726870-80726889 Msa0476820:CDS 45.0%
TGAAGTTGAAGAGGAATGGC+AGG + chr3_3:80726899-80726918 None:intergenic 45.0%
GAAGCGACAATTCTGGTACA+AGG - chr3_3:80726972-80726991 Msa0476820:CDS 45.0%
!! CGAGGTTAGTGTTTTGTTCC+TGG - chr3_3:80727066-80727085 Msa0476820:CDS 45.0%
!! GGTTAGTGTTTTGTTCCTGG+TGG - chr3_3:80727069-80727088 Msa0476820:CDS 45.0%
!! TTGAAATAATTTATAATTAT+AGG - chr3_3:80721540-80721559 Msa0476820:intron 5.0%
!! TTTATATATATTTATTAGTT+AGG + chr3_3:80721910-80721929 None:intergenic 5.0%
!! TTAAATTAAAAAACAATAAA+AGG - chr3_3:80724510-80724529 Msa0476820:CDS 5.0%
GTGTTGTGCAGCCATACTTC+CGG + chr3_3:80720894-80720913 None:intergenic 50.0%
!!! CAGGGCCGTTTCTGAGATTT+TGG - chr3_3:80721856-80721875 Msa0476820:CDS 50.0%
!!! GGCCGTTTCTGAGATTTTGG+TGG - chr3_3:80721859-80721878 Msa0476820:CDS 50.0%
CTTATACAGGGCCGTATCTG+AGG + chr3_3:80722050-80722069 None:intergenic 50.0%
CTCAGACACTTTCGGTTCCA+CGG + chr3_3:80722426-80722445 None:intergenic 50.0%
GGCATGTGCTCAGACACTTT+CGG + chr3_3:80722434-80722453 None:intergenic 50.0%
! CAAAACCAGGGGAGCCATTT+TGG - chr3_3:80723027-80723046 Msa0476820:intron 50.0%
CTGCATTCAATATGCCACCC+AGG + chr3_3:80723077-80723096 None:intergenic 50.0%
GCTATGAGTGCAGCCTATCT+TGG - chr3_3:80723098-80723117 Msa0476820:intron 50.0%
! TCTTTTGACATCCACGGTGG+AGG - chr3_3:80723125-80723144 Msa0476820:intron 50.0%
! CTTTTGACATCCACGGTGGA+GGG - chr3_3:80723126-80723145 Msa0476820:intron 50.0%
! CACGGTCTGAAGCACTTTCA+AGG + chr3_3:80723498-80723517 None:intergenic 50.0%
TGGCACACACAAGGAGAAGA+AGG + chr3_3:80723564-80723583 None:intergenic 50.0%
CATGGACAATGGCACACACA+AGG + chr3_3:80723573-80723592 None:intergenic 50.0%
ACGGCCAAGGGTTTAAATCG+CGG - chr3_3:80724325-80724344 Msa0476820:CDS 50.0%
GCAACCGCGATTTAAACCCT+TGG + chr3_3:80724332-80724351 None:intergenic 50.0%
TTTCAGTCAAGCGCGGTAAG+TGG - chr3_3:80724373-80724392 Msa0476820:intron 50.0%
CAGCCTCAATCGTAGGAGTT+CGG - chr3_3:80724399-80724418 Msa0476820:intron 50.0%
AGCCTCAATCGTAGGAGTTC+GGG - chr3_3:80724400-80724419 Msa0476820:intron 50.0%
TACCCGAACTCCTACGATTG+AGG + chr3_3:80724405-80724424 None:intergenic 50.0%
GGGTTTGGATGCAAGACATG+TGG - chr3_3:80724461-80724480 Msa0476820:intron 50.0%
GGGTTTGGATGCAAGACATG+TGG + chr3_3:80724461-80724480 None:intergenic 50.0%
GTTGCAGCATCAAACCGTCA+AGG + chr3_3:80724751-80724770 None:intergenic 50.0%
! GCTGACCCAATCTAGTGGAT+TGG - chr3_3:80724812-80724831 Msa0476820:intron 50.0%
!! ACACGCTAAGTGCTGAGAAG+TGG - chr3_3:80725377-80725396 Msa0476820:CDS 50.0%
GCTGAGAAGTGGAGATTTCC+GGG - chr3_3:80725388-80725407 Msa0476820:CDS 50.0%
ATAAGATTATGGGTGCGGGG+TGG - chr3_3:80726095-80726114 Msa0476820:intron 50.0%
TAAGATTATGGGTGCGGGGT+GGG - chr3_3:80726096-80726115 Msa0476820:intron 50.0%
GGGGTGATGTGGCAAAATAG+TGG + chr3_3:80726413-80726432 None:intergenic 50.0%
!! GACAGGGTAAGGGTACCCAT+TGG + chr3_3:80720672-80720691 None:intergenic 55.0%
! GCGAGAAGCGTGGTGGAAAA+GGG + chr3_3:80720714-80720733 None:intergenic 55.0%
! AGCGAGAAGCGTGGTGGAAA+AGG + chr3_3:80720715-80720734 None:intergenic 55.0%
TAAGCGGGGATAAGGGTTCG+AGG + chr3_3:80720744-80720763 None:intergenic 55.0%
!! TTTTTCTGAAGACGGCGGCG+CGG + chr3_3:80720767-80720786 None:intergenic 55.0%
AGACGGCGCGAAATGAAGGA+AGG + chr3_3:80720794-80720813 None:intergenic 55.0%
GATGAGACGGCGCGAAATGA+AGG + chr3_3:80720798-80720817 None:intergenic 55.0%
ATCCTCCTCCCAGCCATTCA+CGG - chr3_3:80720815-80720834 Msa0476820:three_prime_UTR 55.0%
TTTCTCCGCCGTGAATGGCT+GGG + chr3_3:80720826-80720845 None:intergenic 55.0%
! TTTTCTCCGCCGTGAATGGC+TGG + chr3_3:80720827-80720846 None:intergenic 55.0%
CCGGCGAAGGACTGTTTGAA+CGG + chr3_3:80720875-80720894 None:intergenic 55.0%
CCGTTCAAACAGTCCTTCGC+CGG - chr3_3:80720872-80720891 Msa0476820:CDS 55.0%
ACAGTCCTTCGCCGGAAGTA+TGG - chr3_3:80720880-80720899 Msa0476820:CDS 55.0%
ACTTTCGGTTCCACGGTAGC+AGG + chr3_3:80722419-80722438 None:intergenic 55.0%
!! AGCCATTTTGGGAGAGTCCC+TGG - chr3_3:80723039-80723058 Msa0476820:intron 55.0%
!! GCCATTTTGGGAGAGTCCCT+GGG - chr3_3:80723040-80723059 Msa0476820:intron 55.0%
!! CCATTTTGGGAGAGTCCCTG+GGG - chr3_3:80723041-80723060 Msa0476820:intron 55.0%
ATATGCCACCCAGGTCTTCC+AGG + chr3_3:80723068-80723087 None:intergenic 55.0%
! CACACTCCAGTTGCATTGGC+CGG - chr3_3:80723827-80723846 Msa0476820:intron 55.0%
GACATTCCGGCCAATGCAAC+TGG + chr3_3:80723836-80723855 None:intergenic 55.0%
!! CGACTTGCTGCATACTCGCA+AGG - chr3_3:80723877-80723896 Msa0476820:CDS 55.0%
GTGGTGACAGCCTCAATCGT+AGG - chr3_3:80724392-80724411 Msa0476820:intron 55.0%
CTAGGGCATGGGTTTGAACC+CGG + chr3_3:80725409-80725428 None:intergenic 55.0%
AAGATTATGGGTGCGGGGTG+GGG - chr3_3:80726097-80726116 Msa0476820:intron 55.0%
GTCCGAATGGCACAACTTGG+AGG - chr3_3:80726873-80726892 Msa0476820:CDS 55.0%
! GGCCTCCAAGTTGTGCCATT+CGG + chr3_3:80726878-80726897 None:intergenic 55.0%
! TGAGTGAGCGAGAAGCGTGG+TGG + chr3_3:80720721-80720740 None:intergenic 60.0%
AGGTGAGTGAGCGAGAAGCG+TGG + chr3_3:80720724-80720743 None:intergenic 60.0%
TGGCTGGGAGGAGGATGAGA+CGG + chr3_3:80720811-80720830 None:intergenic 60.0%
TGCAGCCATACTTCCGGCGA+AGG + chr3_3:80720888-80720907 None:intergenic 60.0%
! ACAGGGCCGTATCTGAGGCA+GGG + chr3_3:80722045-80722064 None:intergenic 60.0%
! TACAGGGCCGTATCTGAGGC+AGG + chr3_3:80722046-80722065 None:intergenic 60.0%
CTCTCCCAAAATGGCTCCCC+TGG + chr3_3:80723035-80723054 None:intergenic 60.0%
CCCCAGGGACTCTCCCAAAA+TGG + chr3_3:80723044-80723063 None:intergenic 60.0%
CAAGGTCAATCCCTCCACCG+TGG + chr3_3:80723139-80723158 None:intergenic 60.0%
AGATTATGGGTGCGGGGTGG+GGG - chr3_3:80726098-80726117 Msa0476820:intron 60.0%
GGCGCGGTAAGCGGGGATAA+GGG + chr3_3:80720751-80720770 None:intergenic 65.0%
CTCCTCCCAGCCATTCACGG+CGG - chr3_3:80720818-80720837 Msa0476820:three_prime_UTR 65.0%
CGGTCGCCCTGCCTCAGATA+CGG - chr3_3:80722036-80722055 Msa0476820:intron 65.0%
CCAGGTCTTCCAGGACCCCA+GGG + chr3_3:80723059-80723078 None:intergenic 65.0%
CCTGGGGTCCTGGAAGACCT+GGG - chr3_3:80723057-80723076 Msa0476820:intron 65.0%
AAAACCCACCCCGCCAGACC+CGG + chr3_3:80726127-80726146 None:intergenic 65.0%
CGGCGCGGTAAGCGGGGATA+AGG + chr3_3:80720752-80720771 None:intergenic 70.0%
AAGACGGCGGCGCGGTAAGC+GGG + chr3_3:80720759-80720778 None:intergenic 70.0%
GAAGACGGCGGCGCGGTAAG+CGG + chr3_3:80720760-80720779 None:intergenic 70.0%
CGCCGTGAATGGCTGGGAGG+AGG + chr3_3:80720820-80720839 None:intergenic 70.0%
CTCCGCCGTGAATGGCTGGG+AGG + chr3_3:80720823-80720842 None:intergenic 70.0%
TGGGAGAGTCCCTGGGGTCC+TGG - chr3_3:80723047-80723066 Msa0476820:intron 70.0%
CCCTGGGGTCCTGGAAGACC+TGG - chr3_3:80723056-80723075 Msa0476820:intron 70.0%
CCCAGGTCTTCCAGGACCCC+AGG + chr3_3:80723060-80723079 None:intergenic 70.0%
GGGGTCCTGGAAGACCTGGG+TGG - chr3_3:80723060-80723079 Msa0476820:intron 70.0%
GGCAGGTAACGCAGCCCCGA+TGG - chr3_3:80723300-80723319 Msa0476820:intron 70.0%
TTATGGGTGCGGGGTGGGGG+CGG - chr3_3:80726101-80726120 Msa0476820:intron 70.0%
AGACGGCGGCGCGGTAAGCG+GGG + chr3_3:80720758-80720777 None:intergenic 75.0%
TGAGGCAGGGCGACCGCCCT+AGG + chr3_3:80722032-80722051 None:intergenic 75.0%
! GTGGGGGCGGCCGGGTCTGG+CGG - chr3_3:80726114-80726133 Msa0476820:intron 85.0%
! TGGGGGCGGCCGGGTCTGGC+GGG - chr3_3:80726115-80726134 Msa0476820:intron 85.0%
! GCGGCCGGGTCTGGCGGGGT+GGG - chr3_3:80726120-80726139 Msa0476820:intron 85.0%
! GGGTGCGGGGTGGGGGCGGC+CGG - chr3_3:80726105-80726124 Msa0476820:intron 90.0%
! GGTGCGGGGTGGGGGCGGCC+GGG - chr3_3:80726106-80726125 Msa0476820:intron 90.0%
! GGGGTGGGGGCGGCCGGGTC+TGG - chr3_3:80726111-80726130 Msa0476820:intron 90.0%
! GGGGGCGGCCGGGTCTGGCG+GGG - chr3_3:80726116-80726135 Msa0476820:intron 90.0%
! GGCGGCCGGGTCTGGCGGGG+TGG - chr3_3:80726119-80726138 Msa0476820:intron 90.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 80720578 80727191 80720578 ID=Msa0476820;Name=Msa0476820
chr3_3 mRNA 80720578 80727191 80720578 ID=Msa0476820-mRNA-1;Parent=Msa0476820;Name=Msa0476820-mRNA-1;_AED=0.26;_eAED=0.26;_QI=94|1|1|1|1|1|9|260|570
chr3_3 exon 80720578 80721062 80720578 ID=Msa0476820-mRNA-1:exon:22194;Parent=Msa0476820-mRNA-1
chr3_3 exon 80721828 80721929 80721828 ID=Msa0476820-mRNA-1:exon:22193;Parent=Msa0476820-mRNA-1
chr3_3 exon 80723871 80724074 80723871 ID=Msa0476820-mRNA-1:exon:22192;Parent=Msa0476820-mRNA-1
chr3_3 exon 80724235 80724360 80724235 ID=Msa0476820-mRNA-1:exon:22191;Parent=Msa0476820-mRNA-1
chr3_3 exon 80724465 80724746 80724465 ID=Msa0476820-mRNA-1:exon:22190;Parent=Msa0476820-mRNA-1
chr3_3 exon 80724897 80725067 80724897 ID=Msa0476820-mRNA-1:exon:22189;Parent=Msa0476820-mRNA-1
chr3_3 exon 80725291 80725452 80725291 ID=Msa0476820-mRNA-1:exon:22188;Parent=Msa0476820-mRNA-1
chr3_3 exon 80726567 80726630 80726567 ID=Msa0476820-mRNA-1:exon:22187;Parent=Msa0476820-mRNA-1
chr3_3 exon 80726721 80727191 80726721 ID=Msa0476820-mRNA-1:exon:22186;Parent=Msa0476820-mRNA-1
chr3_3 five_prime_UTR 80727098 80727191 80727098 ID=Msa0476820-mRNA-1:five_prime_utr;Parent=Msa0476820-mRNA-1
chr3_3 CDS 80726721 80727097 80726721 ID=Msa0476820-mRNA-1:cds;Parent=Msa0476820-mRNA-1
chr3_3 CDS 80726567 80726630 80726567 ID=Msa0476820-mRNA-1:cds;Parent=Msa0476820-mRNA-1
chr3_3 CDS 80725291 80725452 80725291 ID=Msa0476820-mRNA-1:cds;Parent=Msa0476820-mRNA-1
chr3_3 CDS 80724897 80725067 80724897 ID=Msa0476820-mRNA-1:cds;Parent=Msa0476820-mRNA-1
chr3_3 CDS 80724465 80724746 80724465 ID=Msa0476820-mRNA-1:cds;Parent=Msa0476820-mRNA-1
chr3_3 CDS 80724235 80724360 80724235 ID=Msa0476820-mRNA-1:cds;Parent=Msa0476820-mRNA-1
chr3_3 CDS 80723871 80724074 80723871 ID=Msa0476820-mRNA-1:cds;Parent=Msa0476820-mRNA-1
chr3_3 CDS 80721828 80721929 80721828 ID=Msa0476820-mRNA-1:cds;Parent=Msa0476820-mRNA-1
chr3_3 CDS 80720838 80721062 80720838 ID=Msa0476820-mRNA-1:cds;Parent=Msa0476820-mRNA-1
chr3_3 three_prime_UTR 80720578 80720837 80720578 ID=Msa0476820-mRNA-1:three_prime_utr;Parent=Msa0476820-mRNA-1
Gene Sequence

>Msa0476820

ATGGGTACCCTTACCCTGTCTCTTCTCAAACACTACACACCCTTTTCCACCACGCTTCTCGCTCACTCACCTCGAACCCTTATCCCCGCTTACCGCGCCGCCGTCTTCAGAAAAAACAACCTTCCTTCATTTCGCGCCGTCTCATCCTCCTCCCAGCCATTCACGGCGGAGAAAAATTCTCACGACGGTGGTGAAAATTTCCGTTCAAACAGTCCTTCGCCGGAAGTATGGCTGCACAACACAATGAGTAAAAAGAAAGAGATTTTTAAGCCCAAAGTGGAAAAGAAAGTTGGAATGTATGTTTGTGGCGTTACTGCTTATGATCTTAGCCATATTGGTCATGCTCGTGTTTACGTCAATTTCGATCTTCTTTACAGATATTTTAAGCACCTGGGATTTGAAGTTTGTTATGTTCGCAATTTTACAGATGTAGATGACAAGATAATTGCCAGATCGAAGGAGTTAGGAGAAGATCCAATCAGTTTGAGTCGACGCTATTGTGAAGAGTTTTGTCAAGACATGGTAACTCTTAATTGTTTGCCTGCTACCGTGGAACCGAAAGTGTCTGAGCACATGCCCCAAATCATTGATATGATTGAGAAGATTCTTAATAATGGGTATGCGTACAATGTTGATGGGGATATATACTTTAATGTAGAAAAATTTCCAGAATATGGGAAATTATCAAGTCGAGGTCTAGAAGATAATCGAGCTGGTGAGAGGGTTGCTGTTGATTCAAGGAAGAAAAATCCTGCTGATTTTGCTCTTTGGAAGTCTACAAAACCAGGGGAGCCATTTTGGGAGAGTCCCTGGGGTCCTGGAAGACCTGGGTGGCATATTGAATGCAGTGCTATGAGTGCAGCCTATCTTGGTTACTCTTTTGACATCCACGGTGGAGGGATTGACCTTGTATTTCCTCACCATGAAAATGAAATTGCTCAGAGTTGTGCTGCTTGTAGTAAAAGTGATATTAGTGTATGGATGCACAATGGTTTTGTCACCATTGACTCAGTGAAGATGTCTAAATCTCTGGGAAACTTTTTCACGATACGGCAGGTTGTAGATGTTTACCATCCGTTGGCTTTGAGATATTTTTTGATGAGTGCTCATTATAGATCTCCCATGAACTACTCTAATATACACCTTGAAAGTGCTTCAGACCGTGTTTTTTATATATACGAGACATTACATGAATGTGAAAGCTTTCTGAAGCAGCATGATCAGACAGTTAGGAAGGATTCCGTCCCATCAGATACTTTGAGTATTATCGATAACTTCTATGATGTTTTTCGGACCTCGATGTCTGATGATCTTCACACTCCAGTTGCATTGGCCGGAATGTCTGACCCACTAAAATTAATTAACGACTTGCTGCATACTCGCAAGGGAAAAAAACAGCAATTTCGAATAGAATCACTTGCAGCTTTGAAGAAAAGCATCGGGGATGTCCTTACTGTTTTAGGTCTCATGCCTTCAAGTTATTATGAGGTTTTACAGCAGCTTAAGGAGAAAGCTCTGAATCGTGCAAACTTGACAGAAGTTGAAATCTTGAAGAAGATCGAAGAACGGGATACTGCTCGAATACAAAAGGAGTATGCCAAATCCGATTCCATAAGGAAAGATTTAGCTGTTCTTGGTATTGCTCTTATGGATAGTCCGAATGGCACAACTTGGAGGCCTGCCATTCCTCTTCAACTTCAAGAACAACTCTAG

Protein sequence

>Msa0476820

MGTLTLSLLKHYTPFSTTLLAHSPRTLIPAYRAAVFRKNNLPSFRAVSSSSQPFTAEKNSHDGGENFRSNSPSPEVWLHNTMSKKKEIFKPKVEKKVGMYVCGVTAYDLSHIGHARVYVNFDLLYRYFKHLGFEVCYVRNFTDVDDKIIARSKELGEDPISLSRRYCEEFCQDMVTLNCLPATVEPKVSEHMPQIIDMIEKILNNGYAYNVDGDIYFNVEKFPEYGKLSSRGLEDNRAGERVAVDSRKKNPADFALWKSTKPGEPFWESPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGIDLVFPHHENEIAQSCAACSKSDISVWMHNGFVTIDSVKMSKSLGNFFTIRQVVDVYHPLALRYFLMSAHYRSPMNYSNIHLESASDRVFYIYETLHECESFLKQHDQTVRKDSVPSDTLSIIDNFYDVFRTSMSDDLHTPVALAGMSDPLKLINDLLHTRKGKKQQFRIESLAALKKSIGDVLTVLGLMPSSYYEVLQQLKEKALNRANLTEVEILKKIEERDTARIQKEYAKSDSIRKDLAVLGIALMDSPNGTTWRPAIPLQLQEQL*