AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0719160


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0719160 MtrunA17_Chr5g0409601 94.937 79 4 0 5 83 242 320 1.88e-52 166
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0719160 AT5G48790.1 75.000 76 18 1 5 80 239 313 7.45e-38 128

Find 114 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAAATTGGAAGTTGATTT+TGG 0.139233 5_1:+14174547 Msa0719160:five_prime_UTR
TGTTCTTCTGTTTCAGCTTC+TGG 0.198016 5_1:+14172711 Msa0719160:five_prime_UTR
TTAAGATTGTTGTTCATTAT+AGG 0.222690 5_1:-14174168 None:intergenic
AGGGAAGAGGGTGTTATTAT+TGG 0.229518 5_1:-14172487 None:intergenic
TTCATTTCATCAAGGAATAC+TGG 0.245114 5_1:-14174466 None:intergenic
TAGCTGTTTGTTATCCTTCA+TGG 0.246471 5_1:-14174058 None:intergenic
CATTCTTCTCAGGACCTTCC+AGG 0.258428 5_1:-14175922 None:intergenic
TACAATCTATAGTTAGTTTC+AGG 0.277271 5_1:+14174579 Msa0719160:five_prime_UTR
TATCACAACTCCACATTTAA+TGG 0.277337 5_1:-14172220 None:intergenic
CTACCGTTGACATTGAAATA+TGG 0.280220 5_1:-14175196 None:intergenic
ATGTGAGTGTTGTAAATATT+TGG 0.296513 5_1:-14174730 None:intergenic
AATGGTGGGTTTATCAGAAT+TGG 0.317994 5_1:+14172639 Msa0719160:five_prime_UTR
TTCTTGCATAAGTATTTGTT+TGG 0.330356 5_1:+14175442 Msa0719160:five_prime_UTR
GGCTAAAGTTGCAGTGGAAT+TGG 0.351634 5_1:+14174035 Msa0719160:intron
AAGTCTACTTCGTTAGCTTC+TGG 0.359116 5_1:-14175028 None:intergenic
AGGTATCAAAGATGAGATAT+TGG 0.360710 5_1:+14175481 Msa0719160:five_prime_UTR
AGTAGATTCACTCCTCAGTT+TGG 0.361289 5_1:-14174139 None:intergenic
TTCGTAAGTTCAGCAAGCTT+TGG 0.368606 5_1:-14175590 None:intergenic
TTGGTCTCCGGCTTCTTCTT+CGG 0.372425 5_1:+14176473 Msa0719160:three_prime_UTR
TCTGTTTCAGCTTCTGGTGA+TGG 0.398594 5_1:+14172717 Msa0719160:five_prime_UTR
CTCAGGACCTTCCAGGGTCC+TGG 0.401002 5_1:-14175915 None:intergenic
GACTTAGCACTTAATATAAG+AGG 0.408271 5_1:+14172411 Msa0719160:five_prime_UTR
AGAAAATAGTAATCCTTGAA+TGG 0.408376 5_1:+14175541 Msa0719160:exon
TACTACTCCCCATTCTTCTC+AGG 0.409708 5_1:-14175932 None:intergenic
TTCTTCGGAGATTCTGCGGT+TGG 0.413006 5_1:+14176488 Msa0719160:three_prime_UTR
AAACAACAGGGGTTGGTCTC+CGG 0.421170 5_1:+14176461 Msa0719160:intron
TGGAAGGTCCTGAGAAGAAT+GGG 0.428971 5_1:+14175924 Msa0719160:CDS
GTTGTTAATACCGTTGAAGA+TGG 0.430296 5_1:-14172511 None:intergenic
AGGGACTACTTCTCCTTCAA+TGG 0.434041 5_1:+14172662 Msa0719160:five_prime_UTR
AATGAACAACAATCTTAAAC+AGG 0.436254 5_1:+14174173 Msa0719160:five_prime_UTR
GAAGGATAACAAACAGCTAA+TGG 0.436771 5_1:+14174062 Msa0719160:five_prime_UTR
GGTATCAAAGATGAGATATT+GGG 0.439475 5_1:+14175482 Msa0719160:five_prime_UTR
TCACCCTACCTATAGGCTAT+AGG 0.444996 5_1:-14176853 None:intergenic
GATAATCTAGGTTCTCAAGT+TGG 0.454267 5_1:+14172599 Msa0719160:intron
CTACTTGTAGGTACCATTGA+AGG 0.455960 5_1:-14172675 None:intergenic
GAAGTCCTTTCTACCTTCCA+TGG 0.456657 5_1:+14175610 Msa0719160:CDS
ATGTTTGTTGCTGTACAGTT+TGG 0.456722 5_1:+14176597 Msa0719160:three_prime_UTR
AAAGAAGTGATTTGATCAAT+CGG 0.456814 5_1:-14176708 None:intergenic
GGTTGTACATCAATTACAAC+TGG 0.457717 5_1:-14174986 None:intergenic
ACGAATCAATTGCATGCTTC+CGG 0.458484 5_1:-14174352 None:intergenic
GAAATTGACCGTATCAGATC+TGG 0.465914 5_1:+14175374 Msa0719160:five_prime_UTR
GAGATTGAGTTTCCCACAGC+TGG 0.466925 5_1:+14174195 Msa0719160:five_prime_UTR
AATATATACCTATAGCCTAT+AGG 0.467581 5_1:+14176845 Msa0719160:three_prime_UTR
TACCGTTGACATTGAAATAT+GGG 0.469846 5_1:-14175195 None:intergenic
TTGCATAAGTATTTGTTTGG+TGG 0.479731 5_1:+14175445 Msa0719160:five_prime_UTR
TCAGAGTAATCAAAAGGAAA+AGG 0.483879 5_1:-14172765 None:intergenic
ATATGTCTGTCTACATCAGC+AGG 0.485033 5_1:+14175956 Msa0719160:CDS
AGTTGCGATTGTCAAAGAAA+TGG 0.492237 5_1:+14176533 Msa0719160:three_prime_UTR
CTGGAAGGTCCTGAGAAGAA+TGG 0.492934 5_1:+14175923 Msa0719160:CDS
AATTTCAAGGGTCGCGATAG+AGG 0.494818 5_1:+14175653 Msa0719160:CDS
ATTCTTCTCAGGACCTTCCA+GGG 0.499708 5_1:-14175921 None:intergenic
TAAGAGGTGCATGTTGCAAA+TGG 0.501210 5_1:+14172427 Msa0719160:five_prime_UTR
GGATAATCTTGATCCATTCA+AGG 0.502104 5_1:-14175554 None:intergenic
ATGTAGTGCACCGATCATAA+TGG 0.503045 5_1:-14174646 None:intergenic
TATTACATTCATAATTTCAA+GGG 0.505529 5_1:+14175641 Msa0719160:CDS
AGTTTCCATGGAAGGTAGAA+AGG 0.512868 5_1:-14175615 None:intergenic
TGCAGTGGAATTGGCCATGA+AGG 0.513837 5_1:+14174044 Msa0719160:five_prime_UTR
GTATTACATTCATAATTTCA+AGG 0.518169 5_1:+14175640 Msa0719160:CDS
AGAAGCTCAGAGTAATCAAA+AGG 0.518809 5_1:-14172771 None:intergenic
AATGTAATACACAGTTTCCA+TGG 0.519031 5_1:-14175627 None:intergenic
CGTTGAAGATGGGAGGGAAG+AGG 0.521616 5_1:-14172500 None:intergenic
TATTCCTTGATGAAATGAAA+AGG 0.529892 5_1:+14174470 Msa0719160:five_prime_UTR
TCATTTCATCAAGGAATACT+GGG 0.530841 5_1:-14174465 None:intergenic
AGTAGACTTTGCAAGACAAT+CGG 0.535436 5_1:+14175042 Msa0719160:five_prime_UTR
GGTGGGTTTATCAGAATTGG+AGG 0.544162 5_1:+14172642 Msa0719160:five_prime_UTR
GCTGGACTCGAATCCGTACC+AGG 0.545971 5_1:+14174213 Msa0719160:five_prime_UTR
TTCGCAATTGACAACGCAGC+AGG 0.547193 5_1:-14174754 None:intergenic
AGGGCAACTTCTTTGAGAGA+TGG 0.550489 5_1:-14175987 None:intergenic
GTTGAAGATGGGAGGGAAGA+GGG 0.550698 5_1:-14172499 None:intergenic
TTGTTAATACCGTTGAAGAT+GGG 0.551534 5_1:-14172510 None:intergenic
GCAAGACAATCGGCCTTCAG+TGG 0.552335 5_1:+14175052 Msa0719160:five_prime_UTR
ACTGGGAGCATAAAGAAGAA+TGG 0.552923 5_1:-14174448 None:intergenic
ATCACAGGTGATGGTGAAGG+TGG 0.566648 5_1:+14174318 Msa0719160:intron
GAAATATATAGGACCTGGTA+CGG 0.572631 5_1:-14174226 None:intergenic
CTCTTCCCTCCCATCTTCAA+CGG 0.574000 5_1:+14172501 Msa0719160:five_prime_UTR
GGATACAGCCAGATCTGATA+CGG 0.578864 5_1:-14175382 None:intergenic
AGAATCTCCGAAGAAGAAGC+CGG 0.579702 5_1:-14176480 None:intergenic
CTTCTTCTTCGGAGATTCTG+CGG 0.579999 5_1:+14176484 Msa0719160:three_prime_UTR
GCGCCTTTGCAGTACTAAAG+TGG 0.580161 5_1:+14176555 Msa0719160:three_prime_UTR
GAAGGTGGAATAGAGATGAC+CGG 0.583492 5_1:+14174333 Msa0719160:five_prime_UTR
TACGGATTCGAGTCCAGCTG+TGG 0.585974 5_1:-14174208 None:intergenic
AGTTTCAGTAATAATAGTAA+TGG 0.591551 5_1:+14176038 Msa0719160:three_prime_UTR
TTAATACCGTTGAAGATGGG+AGG 0.593151 5_1:-14172507 None:intergenic
GCAAGCTTTGGATAAAAGAA+CGG 0.596039 5_1:-14175578 None:intergenic
CTTAAAAGAAGCTCCACTGA+AGG 0.601180 5_1:-14175065 None:intergenic
TACCCATATTTCAATGTCAA+CGG 0.602169 5_1:+14175193 Msa0719160:five_prime_UTR
TTGGTGGTGATTAAGAAATG+AGG 0.604333 5_1:+14175461 Msa0719160:five_prime_UTR
TAATACACAGTTTCCATGGA+AGG 0.605202 5_1:-14175623 None:intergenic
TCATATCATATGCTATGAGT+AGG 0.605984 5_1:-14174619 None:intergenic
ATATGAGCATCCATTATGAT+CGG 0.608062 5_1:+14174636 Msa0719160:five_prime_UTR
AAGCAGTCGTGAACACTGAA+CGG 0.612733 5_1:+14175330 Msa0719160:five_prime_UTR
TAATACCGTTGAAGATGGGA+GGG 0.612856 5_1:-14172506 None:intergenic
GTAGGTGCTATCCAGGACCC+TGG 0.616080 5_1:+14175904 Msa0719160:intron
GTTGACATTGAAATATGGGT+AGG 0.616675 5_1:-14175191 None:intergenic
GTGCTATCCAGGACCCTGGA+AGG 0.616742 5_1:+14175908 Msa0719160:CDS
TATTTCAGAAATGCTTGTTG+TGG 0.620508 5_1:+14175292 Msa0719160:intron
TATATCACAGGTGATGGTGA+AGG 0.621564 5_1:+14174315 Msa0719160:intron
TTGCGAATCACTGAAAACAA+TGG 0.622996 5_1:+14174770 Msa0719160:five_prime_UTR
AAAAGAGAACATGATTGTTG+TGG 0.623791 5_1:-14172461 None:intergenic
AGAACATGATTGTTGTGGTG+TGG 0.624573 5_1:-14172456 None:intergenic
CCGACAGGCTAAAGTTGCAG+TGG 0.630703 5_1:+14174029 Msa0719160:intron
GTTGGCATCTGATTAACGAA+GGG 0.630829 5_1:+14176506 Msa0719160:three_prime_UTR
ACACCACTTTAGTACTGCAA+AGG 0.636660 5_1:-14176558 None:intergenic
GTCGGACAGAGTGAAGGCAG+AGG 0.640476 5_1:+14175150 Msa0719160:five_prime_UTR
GGTTGGCATCTGATTAACGA+AGG 0.644330 5_1:+14176505 Msa0719160:three_prime_UTR
GTGGGTTTATCAGAATTGGA+GGG 0.649749 5_1:+14172643 Msa0719160:five_prime_UTR
ACGGATTCGAGTCCAGCTGT+GGG 0.655887 5_1:-14174207 None:intergenic
AAACTGTACAGCAACAAACA+TGG 0.656483 5_1:-14176595 None:intergenic
TCCTTGATGAAATGAAAAGG+AGG 0.657774 5_1:+14174473 Msa0719160:five_prime_UTR
AGCTTTGGATAAAAGAACGG+TGG 0.671549 5_1:-14175575 None:intergenic
GGAAGGTCCTGAGAAGAATG+GGG 0.693212 5_1:+14175925 Msa0719160:CDS
AAGCCTAGATTTCATCATCG+AGG 0.702506 5_1:+14174680 Msa0719160:intron
ATTTAAGTGAAAGAAAAGCG+AGG 0.708750 5_1:-14174531 None:intergenic
AAGTTGCACACTCCAAACTG+AGG 0.715414 5_1:+14174127 Msa0719160:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTATTGAAACATTT+TGG + chr5_1:14173529-14173548 Msa0719160:intron 10.0%
!! TATAACTTTATTGAACATTT+AGG + chr5_1:14172933-14172952 Msa0719160:intron 15.0%
!!! TATATTCCTTTAAAGTATTA+GGG - chr5_1:14173798-14173817 None:intergenic 15.0%
!!! TTATATTCCTTTAAAGTATT+AGG - chr5_1:14173799-14173818 None:intergenic 15.0%
!! GTTATCTTTAATATAAACAA+TGG + chr5_1:14175234-14175253 Msa0719160:intron 15.0%
!! TATTACATTCATAATTTCAA+GGG + chr5_1:14175641-14175660 Msa0719160:CDS 15.0%
!!! TTCAATTTTAGTTACAAAAA+TGG + chr5_1:14176234-14176253 Msa0719160:intron 15.0%
!!! TTGTTTTCAAAACATTATTT+TGG + chr5_1:14176261-14176280 Msa0719160:intron 15.0%
!!! TTTTTTTTCTCTCTTTTCAT+TGG + chr5_1:14172279-14172298 Msa0719160:intron 20.0%
!!! TTTTCATTGGTTAAAAACAA+TGG + chr5_1:14172292-14172311 Msa0719160:intron 20.0%
!!! GAAACTTTTTCTCTTAAAAA+TGG + chr5_1:14172621-14172640 Msa0719160:five_prime_UTR 20.0%
!!! ATGTTGAGTTTTAATATTGA+TGG + chr5_1:14172850-14172869 Msa0719160:intron 20.0%
!! ATAATTAAGCTAATGCTATA+AGG - chr5_1:14172988-14173007 None:intergenic 20.0%
!! GAAATTGTATTATAAGCTAT+CGG + chr5_1:14173030-14173049 Msa0719160:intron 20.0%
!! TCTTGATAAAAGTTTAAAAG+AGG - chr5_1:14173126-14173145 None:intergenic 20.0%
!! ACTTATTTAAGCTTATATAG+TGG - chr5_1:14173762-14173781 None:intergenic 20.0%
!!! TTAAAGTATTAGGGTATATT+TGG - chr5_1:14173789-14173808 None:intergenic 20.0%
!! AATATACCCTAATACTTTAA+AGG + chr5_1:14173789-14173808 Msa0719160:intron 20.0%
!!! TTAAGATTGTTGTTCATTAT+AGG - chr5_1:14174171-14174190 None:intergenic 20.0%
!! GTTTATATTAAAGATAACAG+AGG - chr5_1:14175232-14175251 None:intergenic 20.0%
!! TCTTTAATATAAACAATGGA+CGG + chr5_1:14175238-14175257 Msa0719160:intron 20.0%
!! GTATTACATTCATAATTTCA+AGG + chr5_1:14175640-14175659 Msa0719160:CDS 20.0%
!!! GTGTTTATCAAATTTTATGT+AGG + chr5_1:14175886-14175905 Msa0719160:intron 20.0%
!!! AAACTGATACATCAATTTTT+CGG - chr5_1:14176023-14176042 None:intergenic 20.0%
!! AGTTTCAGTAATAATAGTAA+TGG + chr5_1:14176038-14176057 Msa0719160:three_prime_UTR 20.0%
!! TAATCTTAATTTATATGCCT+CGG + chr5_1:14176152-14176171 Msa0719160:intron 20.0%
!! TTTATGTACTAATAAACAAC+AGG + chr5_1:14176448-14176467 Msa0719160:intron 20.0%
!! TTATGTACTAATAAACAACA+GGG + chr5_1:14176449-14176468 Msa0719160:intron 20.0%
!!! TTGATTTTGACCATTAAATG+TGG + chr5_1:14172210-14172229 Msa0719160:five_prime_UTR 25.0%
! AAAACAATGGATAGAGTAAA+AGG + chr5_1:14172305-14172324 Msa0719160:intron 25.0%
!!! TTTTTGAAGGAAAGTAGTAA+AGG - chr5_1:14172543-14172562 None:intergenic 25.0%
!!! ACTTTTTCTCTTAAAAATGG+TGG + chr5_1:14172624-14172643 Msa0719160:five_prime_UTR 25.0%
!! CTTTTTCTCTTAAAAATGGT+GGG + chr5_1:14172625-14172644 Msa0719160:five_prime_UTR 25.0%
!! ATAGCTAATTTTCTACTTGT+AGG - chr5_1:14172690-14172709 None:intergenic 25.0%
! TGATAAAAGTTTAAAAGAGG+AGG - chr5_1:14173123-14173142 None:intergenic 25.0%
!!! TGAAACATTTTGGTCTTATT+TGG + chr5_1:14173539-14173558 Msa0719160:intron 25.0%
!! TGCTAATAAAGCACTAAAAT+TGG + chr5_1:14173999-14174018 Msa0719160:intron 25.0%
! AATGAACAACAATCTTAAAC+AGG + chr5_1:14174173-14174192 Msa0719160:five_prime_UTR 25.0%
! TATTCCTTGATGAAATGAAA+AGG + chr5_1:14174470-14174489 Msa0719160:five_prime_UTR 25.0%
!! TTTTTACAAGTAGTGAAGAT+AGG - chr5_1:14174499-14174518 None:intergenic 25.0%
!!! CTTAAATTGGAAGTTGATTT+TGG + chr5_1:14174547-14174566 Msa0719160:five_prime_UTR 25.0%
!! TACAATCTATAGTTAGTTTC+AGG + chr5_1:14174579-14174598 Msa0719160:five_prime_UTR 25.0%
!! ATGTGAGTGTTGTAAATATT+TGG - chr5_1:14174733-14174752 None:intergenic 25.0%
!!! GGAAAAAACTGATTTTTACA+AGG - chr5_1:14175010-14175029 None:intergenic 25.0%
! CCAAAATCTTGAAAAAATGA+AGG - chr5_1:14175109-14175128 None:intergenic 25.0%
!!! CCTTCATTTTTTCAAGATTT+TGG + chr5_1:14175106-14175125 Msa0719160:five_prime_UTR 25.0%
! TGTTGAGAAAGTAAAAATGT+CGG + chr5_1:14175132-14175151 Msa0719160:five_prime_UTR 25.0%
! TTCTTGCATAAGTATTTGTT+TGG + chr5_1:14175442-14175461 Msa0719160:five_prime_UTR 25.0%
!! AAGGATTACTATTTTCTGAA+AGG - chr5_1:14175538-14175557 None:intergenic 25.0%
! AGAAAATAGTAATCCTTGAA+TGG + chr5_1:14175541-14175560 Msa0719160:exon 25.0%
! AAACATGAAAATGAAAACCA+AGG + chr5_1:14176339-14176358 Msa0719160:intron 25.0%
! TATGTACTAATAAACAACAG+GGG + chr5_1:14176450-14176469 Msa0719160:intron 25.0%
! AAAGAAGTGATTTGATCAAT+CGG - chr5_1:14176711-14176730 None:intergenic 25.0%
TATCACAACTCCACATTTAA+TGG - chr5_1:14172223-14172242 None:intergenic 30.0%
! CAACCATTTGATACAACTTT+TGG + chr5_1:14172249-14172268 Msa0719160:intron 30.0%
TCACCAAAAGTTGTATCAAA+TGG - chr5_1:14172255-14172274 None:intergenic 30.0%
AAAGGAAAAGAGAGAATAAG+AGG + chr5_1:14172323-14172342 Msa0719160:intron 30.0%
GACTTAGCACTTAATATAAG+AGG + chr5_1:14172411-14172430 Msa0719160:five_prime_UTR 30.0%
AAAAGAGAACATGATTGTTG+TGG - chr5_1:14172464-14172483 None:intergenic 30.0%
TTGTTAATACCGTTGAAGAT+GGG - chr5_1:14172513-14172532 None:intergenic 30.0%
!!! CTTATTGAAGGCATTTTTGA+AGG - chr5_1:14172556-14172575 None:intergenic 30.0%
CTAGATTATCAGAAAAGCAA+TGG - chr5_1:14172589-14172608 None:intergenic 30.0%
!! CATTGCTTTTCTGATAATCT+AGG + chr5_1:14172587-14172606 Msa0719160:intron 30.0%
TCAGAGTAATCAAAAGGAAA+AGG - chr5_1:14172768-14172787 None:intergenic 30.0%
! TTGAACATTTAGGTTCTCTT+TGG + chr5_1:14172943-14172962 Msa0719160:intron 30.0%
ATAAAACAAGCCGAAGAAAA+TGG + chr5_1:14173069-14173088 Msa0719160:intron 30.0%
! GTTCATGAAACCATTTTCTT+CGG - chr5_1:14173082-14173101 None:intergenic 30.0%
GTTTCATGAACATATCTTAC+TGG + chr5_1:14173091-14173110 Msa0719160:intron 30.0%
! AGAGTCTTATCTAATCAATG+TGG + chr5_1:14173143-14173162 Msa0719160:intron 30.0%
! GAGTCTTATCTAATCAATGT+GGG + chr5_1:14173144-14173163 Msa0719160:intron 30.0%
!! TGGAAATTCCGCTTTTATTA+TGG - chr5_1:14173249-14173268 None:intergenic 30.0%
GTATTAGGGTATGTTTGAAT+TGG - chr5_1:14173329-14173348 None:intergenic 30.0%
GTCAAATTGTGTATAAGCTA+TGG + chr5_1:14173663-14173682 Msa0719160:intron 30.0%
AATAAGCTGAAAACAGCTTA+TGG + chr5_1:14173701-14173720 Msa0719160:intron 30.0%
ATAAGCTGAAAACAGCTTAT+GGG + chr5_1:14173702-14173721 Msa0719160:intron 30.0%
AAGCTTATATAGTGGCATAA+AGG - chr5_1:14173754-14173773 None:intergenic 30.0%
! TCTGTCCAGATTTTAAATTG+CGG + chr5_1:14173828-14173847 Msa0719160:intron 30.0%
TCGTATACTACAGAAAATTG+TGG + chr5_1:14173864-14173883 Msa0719160:intron 30.0%
ACAGAAAATTGTGGTCAAAT+AGG + chr5_1:14173873-14173892 Msa0719160:intron 30.0%
!!! CGAACTGTTTTTTAAAACCT+TGG + chr5_1:14173950-14173969 Msa0719160:intron 30.0%
! AAAATTGGTTTATTTCCGAC+AGG + chr5_1:14174014-14174033 Msa0719160:intron 30.0%
AAACTGAAATATATAGGACC+TGG - chr5_1:14174234-14174253 None:intergenic 30.0%
TCCTATATATTTCAGTTTCC+TGG + chr5_1:14174236-14174255 Msa0719160:intron 30.0%
ACCAGGAAACTGAAATATAT+AGG - chr5_1:14174240-14174259 None:intergenic 30.0%
!!! TTTCAGTTTCCTGGTTTTTT+AGG + chr5_1:14174245-14174264 Msa0719160:intron 30.0%
!!! TTCAGTTTCCTGGTTTTTTA+GGG + chr5_1:14174246-14174265 Msa0719160:intron 30.0%
CATCTCACTAATTATATCAC+AGG + chr5_1:14174303-14174322 Msa0719160:intron 30.0%
ACTAATTATATCACAGGTGA+TGG + chr5_1:14174309-14174328 Msa0719160:intron 30.0%
TCATTTCATCAAGGAATACT+GGG - chr5_1:14174468-14174487 None:intergenic 30.0%
TTCATTTCATCAAGGAATAC+TGG - chr5_1:14174469-14174488 None:intergenic 30.0%
ATTTAAGTGAAAGAAAAGCG+AGG - chr5_1:14174534-14174553 None:intergenic 30.0%
! CGCTTTTCTTTCACTTAAAT+TGG + chr5_1:14174534-14174553 Msa0719160:five_prime_UTR 30.0%
TCATATCATATGCTATGAGT+AGG - chr5_1:14174622-14174641 None:intergenic 30.0%
ATATGAGCATCCATTATGAT+CGG + chr5_1:14174636-14174655 Msa0719160:five_prime_UTR 30.0%
!!! TTTGTCTAGTTTTGTAGAGA+TGG + chr5_1:14174922-14174941 Msa0719160:five_prime_UTR 30.0%
TACCCATATTTCAATGTCAA+CGG + chr5_1:14175193-14175212 Msa0719160:five_prime_UTR 30.0%
TACCGTTGACATTGAAATAT+GGG - chr5_1:14175198-14175217 None:intergenic 30.0%
TAAAGATAACAGAGGAAGTT+TGG - chr5_1:14175224-14175243 None:intergenic 30.0%
! TATTTCAGAAATGCTTGTTG+TGG + chr5_1:14175292-14175311 Msa0719160:intron 30.0%
! TAGCTGCATAATTTTGCAAA+AGG - chr5_1:14175406-14175425 None:intergenic 30.0%
TTGCATAAGTATTTGTTTGG+TGG + chr5_1:14175445-14175464 Msa0719160:five_prime_UTR 30.0%
AGGTATCAAAGATGAGATAT+TGG + chr5_1:14175481-14175500 Msa0719160:five_prime_UTR 30.0%
GGTATCAAAGATGAGATATT+GGG + chr5_1:14175482-14175501 Msa0719160:five_prime_UTR 30.0%
AATGTAATACACAGTTTCCA+TGG - chr5_1:14175630-14175649 None:intergenic 30.0%
ATGCTTGTCATGTGATAATT+TGG + chr5_1:14175742-14175761 Msa0719160:intron 30.0%
TGCTTGTCATGTGATAATTT+GGG + chr5_1:14175743-14175762 Msa0719160:intron 30.0%
GGAAATGTTAATATCTTGCT+TGG + chr5_1:14175764-14175783 Msa0719160:intron 30.0%
GATATGTATGCAGTGAAATT+TGG + chr5_1:14175786-14175805 Msa0719160:intron 30.0%
!! ATTTTTCGGAAGAATCTCAA+GGG - chr5_1:14176009-14176028 None:intergenic 30.0%
!! AATTTTTCGGAAGAATCTCA+AGG - chr5_1:14176010-14176029 None:intergenic 30.0%
! ATAACATTGGCATTAGCTTA+AGG + chr5_1:14176182-14176201 Msa0719160:intron 30.0%
!! CTGTTTCTATAGACATGTTA+GGG - chr5_1:14176365-14176384 None:intergenic 30.0%
GTTGTTAATACCGTTGAAGA+TGG - chr5_1:14172514-14172533 None:intergenic 35.0%
GGAGTATGAGAACTTATTGA+AGG - chr5_1:14172568-14172587 None:intergenic 35.0%
GATAATCTAGGTTCTCAAGT+TGG + chr5_1:14172599-14172618 Msa0719160:intron 35.0%
!! AATGGTGGGTTTATCAGAAT+TGG + chr5_1:14172639-14172658 Msa0719160:five_prime_UTR 35.0%
AGAAGCTCAGAGTAATCAAA+AGG - chr5_1:14172774-14172793 None:intergenic 35.0%
!! TTTTGATTACTCTGAGCTTC+TGG + chr5_1:14172773-14172792 Msa0719160:five_prime_UTR 35.0%
! TATTGATGGACAAAAGCAGT+TGG + chr5_1:14172864-14172883 Msa0719160:intron 35.0%
! GTTTTATAGCTCTCAACGAT+AGG - chr5_1:14173056-14173075 None:intergenic 35.0%
TTACAAGTGTTTATGCCTCT+AGG + chr5_1:14173289-14173308 Msa0719160:intron 35.0%
GCTTATTTAAGCTTACCTAG+AGG - chr5_1:14173307-14173326 None:intergenic 35.0%
ACATACCCTAATACTTGAAG+AGG + chr5_1:14173335-14173354 Msa0719160:intron 35.0%
CATACCCTAATACTTGAAGA+GGG + chr5_1:14173336-14173355 Msa0719160:intron 35.0%
CATTGAAAACCATGATGTTG+TGG + chr5_1:14173392-14173411 Msa0719160:intron 35.0%
CAATTATGACCACAACATCA+TGG - chr5_1:14173404-14173423 None:intergenic 35.0%
! CATGTAATAGAGCACTACAA+TGG + chr5_1:14173456-14173475 Msa0719160:intron 35.0%
TAATGCCTGATGTAGTAAGA+AGG + chr5_1:14173898-14173917 Msa0719160:intron 35.0%
!! TAGCTGTTTGTTATCCTTCA+TGG - chr5_1:14174061-14174080 None:intergenic 35.0%
GAAGGATAACAAACAGCTAA+TGG + chr5_1:14174062-14174081 Msa0719160:five_prime_UTR 35.0%
GAAATATATAGGACCTGGTA+CGG - chr5_1:14174229-14174248 None:intergenic 35.0%
CAATTGTACCCTAAAAAACC+AGG - chr5_1:14174257-14174276 None:intergenic 35.0%
TCCTTGATGAAATGAAAAGG+AGG + chr5_1:14174473-14174492 Msa0719160:five_prime_UTR 35.0%
!!! GGAAGTTGATTTTGGTTACA+AGG + chr5_1:14174555-14174574 Msa0719160:five_prime_UTR 35.0%
ATGATGAAATCTAGGCTTAG+GGG - chr5_1:14174678-14174697 None:intergenic 35.0%
GATGATGAAATCTAGGCTTA+GGG - chr5_1:14174679-14174698 None:intergenic 35.0%
TTGCGAATCACTGAAAACAA+TGG + chr5_1:14174770-14174789 Msa0719160:five_prime_UTR 35.0%
GGTTGTACATCAATTACAAC+TGG - chr5_1:14174989-14175008 None:intergenic 35.0%
AGTAGACTTTGCAAGACAAT+CGG + chr5_1:14175042-14175061 Msa0719160:five_prime_UTR 35.0%
GTTGACATTGAAATATGGGT+AGG - chr5_1:14175194-14175213 None:intergenic 35.0%
CTACCGTTGACATTGAAATA+TGG - chr5_1:14175199-14175218 None:intergenic 35.0%
!! AGTTTCTGGTTCATGATTAC+TGG + chr5_1:14175262-14175281 Msa0719160:intron 35.0%
! CGGAAACTGATCATTTTCAA+TGG + chr5_1:14175350-14175369 Msa0719160:five_prime_UTR 35.0%
!! TTGGTGGTGATTAAGAAATG+AGG + chr5_1:14175461-14175480 Msa0719160:five_prime_UTR 35.0%
GGATAATCTTGATCCATTCA+AGG - chr5_1:14175557-14175576 None:intergenic 35.0%
!! GCAAGCTTTGGATAAAAGAA+CGG - chr5_1:14175581-14175600 None:intergenic 35.0%
TAATACACAGTTTCCATGGA+AGG - chr5_1:14175626-14175645 None:intergenic 35.0%
GGTGATATCTAGACTCTATT+TGG + chr5_1:14175807-14175826 Msa0719160:intron 35.0%
!! ATTTTATGTAGGTGCTATCC+AGG + chr5_1:14175897-14175916 Msa0719160:intron 35.0%
GTAATTAAGGACACACACAA+AGG - chr5_1:14176080-14176099 None:intergenic 35.0%
TGTGTGTGTCCTTAATTACT+TGG + chr5_1:14176081-14176100 Msa0719160:intron 35.0%
GTGGATTCACCAAGTAATTA+AGG - chr5_1:14176093-14176112 None:intergenic 35.0%
TAATTTATATGCCTCGGACA+AGG + chr5_1:14176158-14176177 Msa0719160:intron 35.0%
! CATTAGCTTAAGGTTCTGTT+TGG + chr5_1:14176192-14176211 Msa0719160:intron 35.0%
!! GCTGTTTCTATAGACATGTT+AGG - chr5_1:14176366-14176385 None:intergenic 35.0%
TCTTCATTCAGAGACAAGAA+GGG - chr5_1:14176396-14176415 None:intergenic 35.0%
TTCTTCATTCAGAGACAAGA+AGG - chr5_1:14176397-14176416 None:intergenic 35.0%
TACTAATAAACAACAGGGGT+TGG + chr5_1:14176454-14176473 Msa0719160:intron 35.0%
AGTTGCGATTGTCAAAGAAA+TGG + chr5_1:14176533-14176552 Msa0719160:three_prime_UTR 35.0%
AAACTGTACAGCAACAAACA+TGG - chr5_1:14176598-14176617 None:intergenic 35.0%
! ATGTTTGTTGCTGTACAGTT+TGG + chr5_1:14176597-14176616 Msa0719160:three_prime_UTR 35.0%
GAGAGAAAGTTGTCACAAAG+TGG + chr5_1:14172361-14172380 Msa0719160:intron 40.0%
! TAAGAGGTGCATGTTGCAAA+TGG + chr5_1:14172427-14172446 Msa0719160:five_prime_UTR 40.0%
AGAACATGATTGTTGTGGTG+TGG - chr5_1:14172459-14172478 None:intergenic 40.0%
!! AGGGAAGAGGGTGTTATTAT+TGG - chr5_1:14172490-14172509 None:intergenic 40.0%
TAATACCGTTGAAGATGGGA+GGG - chr5_1:14172509-14172528 None:intergenic 40.0%
TTAATACCGTTGAAGATGGG+AGG - chr5_1:14172510-14172529 None:intergenic 40.0%
GTGGGTTTATCAGAATTGGA+GGG + chr5_1:14172643-14172662 Msa0719160:five_prime_UTR 40.0%
CTACTTGTAGGTACCATTGA+AGG - chr5_1:14172678-14172697 None:intergenic 40.0%
TGTTCTTCTGTTTCAGCTTC+TGG + chr5_1:14172711-14172730 Msa0719160:five_prime_UTR 40.0%
! TACTCTTCGAAAGAGCATGT+TGG - chr5_1:14173269-14173288 None:intergenic 40.0%
TCCACCCTCTTCAAGTATTA+GGG - chr5_1:14173343-14173362 None:intergenic 40.0%
TTCCACCCTCTTCAAGTATT+AGG - chr5_1:14173344-14173363 None:intergenic 40.0%
GAGGGTGGAATTTATAGTTG+TGG + chr5_1:14173354-14173373 Msa0719160:intron 40.0%
! GTAATAGAGCACTACAATGG+AGG + chr5_1:14173459-14173478 Msa0719160:intron 40.0%
! CACAGCCGCAATTTAAAATC+TGG - chr5_1:14173836-14173855 None:intergenic 40.0%
TCATGCCTTCTTACTACATC+AGG - chr5_1:14173906-14173925 None:intergenic 40.0%
GTGCACATGATAGAAAACCA+AGG - chr5_1:14173970-14173989 None:intergenic 40.0%
AGTAGATTCACTCCTCAGTT+TGG - chr5_1:14174142-14174161 None:intergenic 40.0%
! TATATCACAGGTGATGGTGA+AGG + chr5_1:14174315-14174334 Msa0719160:intron 40.0%
ACGAATCAATTGCATGCTTC+CGG - chr5_1:14174355-14174374 None:intergenic 40.0%
! TTTTCTCTGCAGAAATGGAG+AGG - chr5_1:14174389-14174408 None:intergenic 40.0%
! CGTGATTTTCTCTGCAGAAA+TGG - chr5_1:14174394-14174413 None:intergenic 40.0%
! ACTGGGAGCATAAAGAAGAA+TGG - chr5_1:14174451-14174470 None:intergenic 40.0%
! GCCTCCTTTTCATTTCATCA+AGG - chr5_1:14174477-14174496 None:intergenic 40.0%
! ATGTAGTGCACCGATCATAA+TGG - chr5_1:14174649-14174668 None:intergenic 40.0%
CGATGATGAAATCTAGGCTT+AGG - chr5_1:14174680-14174699 None:intergenic 40.0%
AAGCCTAGATTTCATCATCG+AGG + chr5_1:14174680-14174699 Msa0719160:intron 40.0%
CATCCTCGATGATGAAATCT+AGG - chr5_1:14174686-14174705 None:intergenic 40.0%
! AAGTCTACTTCGTTAGCTTC+TGG - chr5_1:14175031-14175050 None:intergenic 40.0%
CTTAAAAGAAGCTCCACTGA+AGG - chr5_1:14175068-14175087 None:intergenic 40.0%
!! CAGTGGAGCTTCTTTTAAGT+TGG + chr5_1:14175069-14175088 Msa0719160:five_prime_UTR 40.0%
AAAAATGTCGGACAGAGTGA+AGG + chr5_1:14175144-14175163 Msa0719160:five_prime_UTR 40.0%
AAACAATGGACGGAAGTTTC+TGG + chr5_1:14175248-14175267 Msa0719160:intron 40.0%
GAAATTGACCGTATCAGATC+TGG + chr5_1:14175374-14175393 Msa0719160:five_prime_UTR 40.0%
!! AGCTTTGGATAAAAGAACGG+TGG - chr5_1:14175578-14175597 None:intergenic 40.0%
TTCGTAAGTTCAGCAAGCTT+TGG - chr5_1:14175593-14175612 None:intergenic 40.0%
AGTTTCCATGGAAGGTAGAA+AGG - chr5_1:14175618-14175637 None:intergenic 40.0%
! GCGATAGAGGAATACTTTTC+AGG + chr5_1:14175666-14175685 Msa0719160:CDS 40.0%
ATATGTCTGTCTACATCAGC+AGG + chr5_1:14175956-14175975 Msa0719160:CDS 40.0%
AGTAAAAGACACCATGCTAG+TGG - chr5_1:14176112-14176131 None:intergenic 40.0%
GTTGGCATCTGATTAACGAA+GGG + chr5_1:14176506-14176525 Msa0719160:three_prime_UTR 40.0%
ACACCACTTTAGTACTGCAA+AGG - chr5_1:14176561-14176580 None:intergenic 40.0%
! GGTGGGTTTATCAGAATTGG+AGG + chr5_1:14172642-14172661 Msa0719160:five_prime_UTR 45.0%
AGGGACTACTTCTCCTTCAA+TGG + chr5_1:14172662-14172681 Msa0719160:five_prime_UTR 45.0%
TCTGTTTCAGCTTCTGGTGA+TGG + chr5_1:14172717-14172736 Msa0719160:five_prime_UTR 45.0%
!! TTGCCTTGTGTTGGCTTTGA+GGG - chr5_1:14173183-14173202 None:intergenic 45.0%
! TTTTATTATGGTCCGCCCCT+AGG - chr5_1:14173237-14173256 None:intergenic 45.0%
ACCCTAATACTTGAAGAGGG+TGG + chr5_1:14173339-14173358 Msa0719160:intron 45.0%
! AGAGCACTACAATGGAGGTT+TGG + chr5_1:14173464-14173483 Msa0719160:intron 45.0%
GAAAAACCTTGATGTCGCAG+TGG + chr5_1:14173924-14173943 Msa0719160:intron 45.0%
GGCTAAAGTTGCAGTGGAAT+TGG + chr5_1:14174035-14174054 Msa0719160:intron 45.0%
AAGTTGCACACTCCAAACTG+AGG + chr5_1:14174127-14174146 Msa0719160:five_prime_UTR 45.0%
GAAGGTGGAATAGAGATGAC+CGG + chr5_1:14174333-14174352 Msa0719160:five_prime_UTR 45.0%
AAGCAGTCGTGAACACTGAA+CGG + chr5_1:14175330-14175349 Msa0719160:five_prime_UTR 45.0%
GGATACAGCCAGATCTGATA+CGG - chr5_1:14175385-14175404 None:intergenic 45.0%
GAAGTCCTTTCTACCTTCCA+TGG + chr5_1:14175610-14175629 Msa0719160:CDS 45.0%
AATTTCAAGGGTCGCGATAG+AGG + chr5_1:14175653-14175672 Msa0719160:CDS 45.0%
ATTCTTCTCAGGACCTTCCA+GGG - chr5_1:14175924-14175943 None:intergenic 45.0%
TGGAAGGTCCTGAGAAGAAT+GGG + chr5_1:14175924-14175943 Msa0719160:CDS 45.0%
TACTACTCCCCATTCTTCTC+AGG - chr5_1:14175935-14175954 None:intergenic 45.0%
! AGGGCAACTTCTTTGAGAGA+TGG - chr5_1:14175990-14176009 None:intergenic 45.0%
! ACTTGGTGAATCCACTAGCA+TGG + chr5_1:14176098-14176117 Msa0719160:intron 45.0%
CCAATGTTATTCCTTGTCCG+AGG - chr5_1:14176172-14176191 None:intergenic 45.0%
CCTCGGACAAGGAATAACAT+TGG + chr5_1:14176169-14176188 Msa0719160:intron 45.0%
CTATAGACATGTTAGGGCCT+TGG - chr5_1:14176359-14176378 None:intergenic 45.0%
AGAATCTCCGAAGAAGAAGC+CGG - chr5_1:14176483-14176502 None:intergenic 45.0%
CTTCTTCTTCGGAGATTCTG+CGG + chr5_1:14176484-14176503 Msa0719160:three_prime_UTR 45.0%
GGTTGGCATCTGATTAACGA+AGG + chr5_1:14176505-14176524 Msa0719160:three_prime_UTR 45.0%
GTTGAAGATGGGAGGGAAGA+GGG - chr5_1:14172502-14172521 None:intergenic 50.0%
CTCTTCCCTCCCATCTTCAA+CGG + chr5_1:14172501-14172520 Msa0719160:five_prime_UTR 50.0%
!! TGCCTTGTGTTGGCTTTGAG+GGG - chr5_1:14173182-14173201 None:intergenic 50.0%
!! GTTGCCTTGTGTTGGCTTTG+AGG - chr5_1:14173184-14173203 None:intergenic 50.0%
! GGAATTGGGTTGCCTTGTGT+TGG - chr5_1:14173192-14173211 None:intergenic 50.0%
AACCCAATTCCACCCCTCAA+AGG + chr5_1:14173201-14173220 Msa0719160:intron 50.0%
! TGCCTTTGAGGGGTGGAATT+GGG - chr5_1:14173206-14173225 None:intergenic 50.0%
! TTGCCTTTGAGGGGTGGAAT+TGG - chr5_1:14173207-14173226 None:intergenic 50.0%
GGGGCGGACCATAATAAAAG+CGG + chr5_1:14173238-14173257 Msa0719160:intron 50.0%
CCACTGCAACTTTAGCCTGT+CGG - chr5_1:14174032-14174051 None:intergenic 50.0%
TGCAGTGGAATTGGCCATGA+AGG + chr5_1:14174044-14174063 Msa0719160:five_prime_UTR 50.0%
GAGATTGAGTTTCCCACAGC+TGG + chr5_1:14174195-14174214 Msa0719160:five_prime_UTR 50.0%
! ATCACAGGTGATGGTGAAGG+TGG + chr5_1:14174318-14174337 Msa0719160:intron 50.0%
TTCGCAATTGACAACGCAGC+AGG - chr5_1:14174757-14174776 None:intergenic 50.0%
CATTCTTCTCAGGACCTTCC+AGG - chr5_1:14175925-14175944 None:intergenic 50.0%
CTGGAAGGTCCTGAGAAGAA+TGG + chr5_1:14175923-14175942 Msa0719160:CDS 50.0%
GGAAGGTCCTGAGAAGAATG+GGG + chr5_1:14175925-14175944 Msa0719160:CDS 50.0%
AGGACACACACAAAGGAAGC+AGG - chr5_1:14176073-14176092 None:intergenic 50.0%
!! AAACAACAGGGGTTGGTCTC+CGG + chr5_1:14176461-14176480 Msa0719160:intron 50.0%
TTGGTCTCCGGCTTCTTCTT+CGG + chr5_1:14176473-14176492 Msa0719160:three_prime_UTR 50.0%
TTCTTCGGAGATTCTGCGGT+TGG + chr5_1:14176488-14176507 Msa0719160:three_prime_UTR 50.0%
GCGCCTTTGCAGTACTAAAG+TGG + chr5_1:14176555-14176574 Msa0719160:three_prime_UTR 50.0%
CGTTGAAGATGGGAGGGAAG+AGG - chr5_1:14172503-14172522 None:intergenic 55.0%
!! CCTTGTGTTGGCTTTGAGGG+GGG - chr5_1:14173180-14173199 None:intergenic 55.0%
!! GCCTTGTGTTGGCTTTGAGG+GGG - chr5_1:14173181-14173200 None:intergenic 55.0%
CACCCCTCAAAGGCAACACA+GGG + chr5_1:14173211-14173230 Msa0719160:intron 55.0%
AGGCCCTGTGTTGCCTTTGA+GGG - chr5_1:14173217-14173236 None:intergenic 55.0%
TAGGCCCTGTGTTGCCTTTG+AGG - chr5_1:14173218-14173237 None:intergenic 55.0%
TCAAAGGCAACACAGGGCCT+AGG + chr5_1:14173217-14173236 Msa0719160:intron 55.0%
CAAAGGCAACACAGGGCCTA+GGG + chr5_1:14173218-14173237 Msa0719160:intron 55.0%
AAAGGCAACACAGGGCCTAG+GGG + chr5_1:14173219-14173238 Msa0719160:intron 55.0%
TCGCAACCACTGCGACATCA+AGG - chr5_1:14173933-14173952 None:intergenic 55.0%
CCGACAGGCTAAAGTTGCAG+TGG + chr5_1:14174029-14174048 Msa0719160:intron 55.0%
ACGGATTCGAGTCCAGCTGT+GGG - chr5_1:14174210-14174229 None:intergenic 55.0%
TACGGATTCGAGTCCAGCTG+TGG - chr5_1:14174211-14174230 None:intergenic 55.0%
GCAAGACAATCGGCCTTCAG+TGG + chr5_1:14175052-14175071 Msa0719160:five_prime_UTR 55.0%
!! TGTGTTGGCTTTGAGGGGGG+TGG - chr5_1:14173177-14173196 None:intergenic 60.0%
CCCCCCTCAAAGCCAACACA+AGG + chr5_1:14173177-14173196 Msa0719160:intron 60.0%
! CCTGTGTTGCCTTTGAGGGG+TGG - chr5_1:14173213-14173232 None:intergenic 60.0%
CCACCCCTCAAAGGCAACAC+AGG + chr5_1:14173210-14173229 Msa0719160:intron 60.0%
GGCCCTGTGTTGCCTTTGAG+GGG - chr5_1:14173216-14173235 None:intergenic 60.0%
GCTGGACTCGAATCCGTACC+AGG + chr5_1:14174213-14174232 Msa0719160:five_prime_UTR 60.0%
GTCGGACAGAGTGAAGGCAG+AGG + chr5_1:14175150-14175169 Msa0719160:five_prime_UTR 60.0%
! GTAGGTGCTATCCAGGACCC+TGG + chr5_1:14175904-14175923 Msa0719160:intron 60.0%
GTGCTATCCAGGACCCTGGA+AGG + chr5_1:14175908-14175927 Msa0719160:CDS 60.0%
CTCAGGACCTTCCAGGGTCC+TGG - chr5_1:14175918-14175937 None:intergenic 65.0%
GGCAACACAGGGCCTAGGGG+CGG + chr5_1:14173222-14173241 Msa0719160:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 14172209 14176865 14172209 ID=Msa0719160;Name=Msa0719160
chr5_1 mRNA 14172209 14176865 14172209 ID=Msa0719160-mRNA-1;Parent=Msa0719160;Name=Msa0719160-mRNA-1;_AED=0.20;_eAED=0.20;_QI=1662|1|1|1|0.62|0.11|9|424|83
chr5_1 exon 14172209 14172234 14172209 ID=Msa0719160-mRNA-1:exon:5562;Parent=Msa0719160-mRNA-1
chr5_1 exon 14172405 14172522 14172405 ID=Msa0719160-mRNA-1:exon:5563;Parent=Msa0719160-mRNA-1
chr5_1 exon 14172609 14172800 14172609 ID=Msa0719160-mRNA-1:exon:5564;Parent=Msa0719160-mRNA-1
chr5_1 exon 14174036 14174234 14174036 ID=Msa0719160-mRNA-1:exon:5565;Parent=Msa0719160-mRNA-1
chr5_1 exon 14174325 14174666 14174325 ID=Msa0719160-mRNA-1:exon:5566;Parent=Msa0719160-mRNA-1
chr5_1 exon 14174690 14175214 14174690 ID=Msa0719160-mRNA-1:exon:5567;Parent=Msa0719160-mRNA-1
chr5_1 exon 14175300 14175687 14175300 ID=Msa0719160-mRNA-1:exon:5568;Parent=Msa0719160-mRNA-1
chr5_1 exon 14175908 14176059 14175908 ID=Msa0719160-mRNA-1:exon:5569;Parent=Msa0719160-mRNA-1
chr5_1 exon 14176470 14176865 14176470 ID=Msa0719160-mRNA-1:exon:5570;Parent=Msa0719160-mRNA-1
chr5_1 five_prime_UTR 14172209 14172234 14172209 ID=Msa0719160-mRNA-1:five_prime_utr;Parent=Msa0719160-mRNA-1
chr5_1 five_prime_UTR 14172405 14172522 14172405 ID=Msa0719160-mRNA-1:five_prime_utr;Parent=Msa0719160-mRNA-1
chr5_1 five_prime_UTR 14172609 14172800 14172609 ID=Msa0719160-mRNA-1:five_prime_utr;Parent=Msa0719160-mRNA-1
chr5_1 five_prime_UTR 14174036 14174234 14174036 ID=Msa0719160-mRNA-1:five_prime_utr;Parent=Msa0719160-mRNA-1
chr5_1 five_prime_UTR 14174325 14174666 14174325 ID=Msa0719160-mRNA-1:five_prime_utr;Parent=Msa0719160-mRNA-1
chr5_1 five_prime_UTR 14174690 14175214 14174690 ID=Msa0719160-mRNA-1:five_prime_utr;Parent=Msa0719160-mRNA-1
chr5_1 five_prime_UTR 14175300 14175559 14175300 ID=Msa0719160-mRNA-1:five_prime_utr;Parent=Msa0719160-mRNA-1
chr5_1 CDS 14175560 14175687 14175560 ID=Msa0719160-mRNA-1:cds;Parent=Msa0719160-mRNA-1
chr5_1 CDS 14175908 14176031 14175908 ID=Msa0719160-mRNA-1:cds;Parent=Msa0719160-mRNA-1
chr5_1 three_prime_UTR 14176032 14176059 14176032 ID=Msa0719160-mRNA-1:three_prime_utr;Parent=Msa0719160-mRNA-1
chr5_1 three_prime_UTR 14176470 14176865 14176470 ID=Msa0719160-mRNA-1:three_prime_utr;Parent=Msa0719160-mRNA-1
Gene Sequence

>Msa0719160

ATGGATCAAGATTATCCACCGTTCTTTTATCCAAAGCTTGCTGAACTTACGAAGTCCTTTCTACCTTCCATGGAAACTGTGTATTACATTCATAATTTCAAGGGTCGCGATAGAGGAATACTTTTCAGGTGCTATCCAGGACCCTGGAAGGTCCTGAGAAGAATGGGGAGTAGTAAATATGTCTGTCTACATCAGCAGGATACTATGCCATCTCTCAAAGAAGTTGCCCTTGAGATTCTTCCGAAAAATTGA

Protein sequence

>Msa0719160

MDQDYPPFFYPKLAELTKSFLPSMETVYYIHNFKGRDRGILFRCYPGPWKVLRRMGSSKYVCLHQQDTMPSLKEVALEILPKN*