Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272440 | XP_013443987.1 | 97.884 | 567 | 12 | 0 | 2 | 568 | 1 | 567 | 0.0 | 1153 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272440 | sp|Q9FEA2|SYEM_ARATH | 74.431 | 571 | 138 | 5 | 3 | 568 | 1 | 568 | 0.0 | 885 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272440 | A0A072TKH0 | 97.884 | 567 | 12 | 0 | 2 | 568 | 1 | 567 | 0.0 | 1153 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026970 | Msa1272440 | 0.809151 | 2.180520e-50 | -8.615850e-47 |
| Msa0060350 | Msa1272440 | 0.811516 | 6.733125e-51 | -8.615850e-47 |
| Msa0679990 | Msa1272440 | 0.842409 | 2.632396e-58 | -8.615850e-47 |
| Msa0130390 | Msa1272440 | 0.812992 | 3.206700e-51 | -8.615850e-47 |
| Msa0143970 | Msa1272440 | 0.807117 | 5.912582e-50 | -8.615850e-47 |
| Msa1234960 | Msa1272440 | 0.844160 | 8.979496e-59 | -8.615850e-47 |
| Msa1238700 | Msa1272440 | 0.812604 | 3.899396e-51 | -8.615850e-47 |
| Msa1272440 | Msa1280130 | 0.819284 | 1.259195e-52 | -8.615850e-47 |
| Msa1272440 | Msa1310110 | 0.811414 | 7.086932e-51 | -8.615850e-47 |
| Msa1087530 | Msa1272440 | 0.802615 | 5.157643e-49 | -8.615850e-47 |
| Msa0342200 | Msa1272440 | 0.810074 | 1.381097e-50 | -8.615850e-47 |
| Msa1146150 | Msa1272440 | 0.821953 | 3.069696e-53 | -8.615850e-47 |
| Msa1184730 | Msa1272440 | 0.816746 | 4.716760e-52 | -8.615850e-47 |
| Msa0509970 | Msa1272440 | 0.800393 | 1.471741e-48 | -8.615850e-47 |
| Msa0545400 | Msa1272440 | 0.801752 | 7.764078e-49 | -8.615850e-47 |
| Msa0563530 | Msa1272440 | 0.802550 | 5.319930e-49 | -8.615850e-47 |
| Msa0910400 | Msa1272440 | 0.819185 | 1.326326e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272440 | MtrunA17_Chr8g0337411 | 97.884 | 567 | 12 | 0 | 2 | 568 | 1 | 567 | 0.0 | 1153 |
| Msa1272440 | MtrunA17_Chr1g0193431 | 26.457 | 223 | 133 | 7 | 56 | 268 | 227 | 428 | 2.80e-13 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272440 | AT5G64050.1 | 74.431 | 571 | 138 | 5 | 3 | 568 | 1 | 568 | 0.0 | 885 |
| Msa1272440 | AT5G26710.1 | 26.724 | 232 | 148 | 7 | 56 | 283 | 214 | 427 | 8.10e-13 | 71.6 |
Find 147 sgRNAs with CRISPR-Local
Find 407 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGCTTAGAGAAATTAAT+TGG | 0.191605 | 8_3:+6046931 | Msa1272440:CDS |
| CTTGAAGGTTAGTTGGAATT+TGG | 0.218881 | 8_3:+6044273 | Msa1272440:intron |
| CTCCAGTATACACAGGTAAA+TGG | 0.227579 | 8_3:+6043816 | Msa1272440:CDS |
| TGTTATCAGATAGACCTTTA+AGG | 0.233010 | 8_3:-6047016 | None:intergenic |
| TAATTGAGAATTCACCTTAA+AGG | 0.242514 | 8_3:+6047002 | Msa1272440:exon |
| TTCCTCTCGGATTGTCTATA+TGG | 0.262201 | 8_3:-6042511 | None:intergenic |
| CTCCTTCACAACATGATCTT+TGG | 0.266362 | 8_3:-6046964 | None:intergenic |
| AAACTCCATGGACCAGATAT+TGG | 0.289795 | 8_3:+6046822 | Msa1272440:CDS |
| TTACTTGGCTTGGCCTTGAT+TGG | 0.294341 | 8_3:+6042359 | Msa1272440:CDS |
| CCCGGCGTTGGTGGAGATTA+TGG | 0.295339 | 8_3:+6042487 | Msa1272440:CDS |
| GCCCATTTACCTGTGTATAC+TGG | 0.307145 | 8_3:-6043818 | None:intergenic |
| AATAACTACCTAGCATTATT+AGG | 0.308600 | 8_3:+6045237 | Msa1272440:CDS |
| TATTTCCTTGTCTCAGCTTT+CGG | 0.324243 | 8_3:-6041548 | None:intergenic |
| AACTCCATGGACCAGATATT+GGG | 0.325552 | 8_3:+6046823 | Msa1272440:CDS |
| GAGAATTGAGGACACTGATT+TGG | 0.335541 | 8_3:+6042294 | Msa1272440:CDS |
| ATAGTTGAAGAGGGCAGTTC+TGG | 0.337351 | 8_3:-6041787 | None:intergenic |
| AAGGCAAGCATTAATATATA+AGG | 0.340829 | 8_3:+6044513 | Msa1272440:CDS |
| AATGCTTGCCTTAGAGTGTT+TGG | 0.346726 | 8_3:-6044502 | None:intergenic |
| TTACACTAGGTTAAAATTGA+TGG | 0.347117 | 8_3:-6041474 | None:intergenic |
| TGTAAGAAGAGTAAGATTGA+TGG | 0.351429 | 8_3:-6041644 | None:intergenic |
| CGTTTCGCTCCTTCTCCTAC+TGG | 0.357577 | 8_3:+6041744 | Msa1272440:CDS |
| AGCATTTACCAAACACTCTA+AGG | 0.371459 | 8_3:+6044494 | Msa1272440:CDS |
| TTCCTTTGGGGACACGAAAC+CGG | 0.372161 | 8_3:-6043898 | None:intergenic |
| TTTCTCATACCTTAACTTTG+TGG | 0.378402 | 8_3:-6045457 | None:intergenic |
| CCAACGCTCTCCGATAAGTT+TGG | 0.379102 | 8_3:-6045843 | None:intergenic |
| GTTGTCTTGCTTTATCAAGC+TGG | 0.380884 | 8_3:+6046852 | Msa1272440:CDS |
| CTTAGAGATCTTACTTGGCT+TGG | 0.387159 | 8_3:+6042349 | Msa1272440:CDS |
| GAGTAAGATTGATGGAGAAA+TGG | 0.387861 | 8_3:-6041636 | None:intergenic |
| TGTCTTGCAGTACAGGGAAA+TGG | 0.392625 | 8_3:+6045194 | Msa1272440:intron |
| CTTTATCAAGCTGGGACTAC+TGG | 0.394232 | 8_3:+6046861 | Msa1272440:CDS |
| GTCACACAAAAGTTATAAAC+TGG | 0.398381 | 8_3:-6044337 | None:intergenic |
| ACACGAAACCGGAATGTATA+AGG | 0.398758 | 8_3:-6043887 | None:intergenic |
| TACTTGGCTTGGCCTTGATT+GGG | 0.399590 | 8_3:+6042360 | Msa1272440:CDS |
| TACTTCCGCATCTGTTGCAT+TGG | 0.399870 | 8_3:-6043840 | None:intergenic |
| TCTTCAACTATTTGTTTGCT+AGG | 0.402742 | 8_3:+6041799 | Msa1272440:CDS |
| ACAACAGCAGCCCCAATATC+TGG | 0.408749 | 8_3:-6046834 | None:intergenic |
| AGGTCTATCTGATAACACTA+TGG | 0.418993 | 8_3:+6047022 | Msa1272440:three_prime_UTR |
| TTAGTGTCTTGAAGGTTAGT+TGG | 0.421536 | 8_3:+6044266 | Msa1272440:intron |
| GAGGAGATGACCAAACTTAT+CGG | 0.422698 | 8_3:+6045833 | Msa1272440:CDS |
| TTTGATAATTTACTCCGATC+AGG | 0.422875 | 8_3:-6044678 | None:intergenic |
| CTCAGGAAGATTATCTTGTA+TGG | 0.423486 | 8_3:-6046365 | None:intergenic |
| TTTACTAACCAAGTTTATCA+AGG | 0.429565 | 8_3:-6045293 | None:intergenic |
| AAGGAACTCCTTATACATTC+CGG | 0.433331 | 8_3:+6043879 | Msa1272440:CDS |
| TTGTCTTGCTTTATCAAGCT+GGG | 0.434211 | 8_3:+6046853 | Msa1272440:CDS |
| TTGTTAGGGCCCGGCGTTGG+TGG | 0.434458 | 8_3:+6042478 | Msa1272440:intron |
| CTTGGCCTTGATTGGGATGA+AGG | 0.436912 | 8_3:+6042367 | Msa1272440:CDS |
| AATGCTTAGAGAAATTAATT+GGG | 0.440402 | 8_3:+6046932 | Msa1272440:CDS |
| CAGTGCTTAGAGATCTTACT+TGG | 0.440771 | 8_3:+6042344 | Msa1272440:CDS |
| TTCTTCACCCTTGATAAACT+TGG | 0.445148 | 8_3:+6045285 | Msa1272440:CDS |
| GGAATTAATAAACCTACTTA+AGG | 0.452227 | 8_3:+6046062 | Msa1272440:intron |
| TGGAAGAAGGCCAAGCTGGC+TGG | 0.452251 | 8_3:+6046440 | Msa1272440:CDS |
| GTCTTGCAGTACAGGGAAAT+GGG | 0.453860 | 8_3:+6045195 | Msa1272440:intron |
| GGAGCGAAACGAACACGAAC+GGG | 0.454822 | 8_3:-6041732 | None:intergenic |
| TCCAGTATACACAGGTAAAT+GGG | 0.457318 | 8_3:+6043817 | Msa1272440:CDS |
| GCATTATTAGGCTGGGGCGA+TGG | 0.457367 | 8_3:+6045249 | Msa1272440:CDS |
| ACTACCTAGCATTATTAGGC+TGG | 0.467068 | 8_3:+6045241 | Msa1272440:CDS |
| TACACTAGGTTAAAATTGAT+GGG | 0.467739 | 8_3:-6041473 | None:intergenic |
| GATTGATGGAGAAATGGAAA+TGG | 0.468308 | 8_3:-6041630 | None:intergenic |
| ATCATATGCAGCCAAGAAGC+TGG | 0.477324 | 8_3:-6046395 | None:intergenic |
| TGGCTATTTCTCATGTCATC+AGG | 0.478083 | 8_3:+6044377 | Msa1272440:CDS |
| TGGAGCAACATCAGTTGGTC+AGG | 0.479769 | 8_3:+6044707 | Msa1272440:CDS |
| AAGGGTGAAGAACTCATTAT+CGG | 0.481496 | 8_3:-6045274 | None:intergenic |
| ATTGTCACAAAGCTAACTTC+AGG | 0.482993 | 8_3:-6046894 | None:intergenic |
| AGGTAGTTATTCATTGCCTC+AGG | 0.487426 | 8_3:-6045225 | None:intergenic |
| GCACTGGAAGAAGGCCAAGC+TGG | 0.487463 | 8_3:+6046436 | Msa1272440:CDS |
| CATTATTAGGCTGGGGCGAT+GGG | 0.487625 | 8_3:+6045250 | Msa1272440:CDS |
| GGAGAGCGTTGGAAGACATC+TGG | 0.488582 | 8_3:+6045854 | Msa1272440:CDS |
| AGTCAATCCCATCCTTAAGT+AGG | 0.493647 | 8_3:-6046074 | None:intergenic |
| CAGTGATCTTGTAGGTGCAC+TGG | 0.497140 | 8_3:+6046420 | Msa1272440:CDS |
| CTTGTAGGTGCACTGGAAGA+AGG | 0.498516 | 8_3:+6046427 | Msa1272440:CDS |
| CTACCTAGCATTATTAGGCT+GGG | 0.502951 | 8_3:+6045242 | Msa1272440:CDS |
| TTCTACCTTCATCCCAATCA+AGG | 0.509052 | 8_3:-6042372 | None:intergenic |
| TGCGGAAGTAGAAGAAGAGC+TGG | 0.513905 | 8_3:+6043853 | Msa1272440:CDS |
| TTTGTGATAATGAGGAGTAA+TGG | 0.513954 | 8_3:+6044310 | Msa1272440:CDS |
| TCGCTGCTTCTGTTCTAATG+AGG | 0.520054 | 8_3:+6042585 | Msa1272440:CDS |
| TATGATAGCAGTGATCTTGT+AGG | 0.521003 | 8_3:+6046412 | Msa1272440:CDS |
| CCATAATCTCCACCAACGCC+GGG | 0.524540 | 8_3:-6042487 | None:intergenic |
| AGTTGGAATTTGGATACACT+TGG | 0.527187 | 8_3:+6044283 | Msa1272440:CDS |
| TAATAAACCTACTTAAGGAT+GGG | 0.527201 | 8_3:+6046067 | Msa1272440:CDS |
| AGAAATGGAAATGGAAGAGA+TGG | 0.529029 | 8_3:-6041621 | None:intergenic |
| AAGAAGCTGGCACAAAACTC+AGG | 0.529754 | 8_3:-6046382 | None:intergenic |
| GACAGAGAATTTGCGTCGAA+AGG | 0.530254 | 8_3:-6041682 | None:intergenic |
| TTAATAAACCTACTTAAGGA+TGG | 0.530398 | 8_3:+6046066 | Msa1272440:CDS |
| ACTGGTAACCTTCATGTTGG+TGG | 0.531616 | 8_3:+6041762 | Msa1272440:CDS |
| TGATTGTTAGGGCCCGGCGT+TGG | 0.533804 | 8_3:+6042475 | Msa1272440:intron |
| ACCATAATCTCCACCAACGC+CGG | 0.533854 | 8_3:-6042488 | None:intergenic |
| GTAGAAGAAGAGCTGGCAAA+AGG | 0.534380 | 8_3:+6043860 | Msa1272440:CDS |
| CAGCCCCAATATCTGGTCCA+TGG | 0.545003 | 8_3:-6046827 | None:intergenic |
| GCTGAGAAACTACTTCAATC+CGG | 0.545585 | 8_3:+6042553 | Msa1272440:CDS |
| GGCTTCCTCACAATATCAGA+AGG | 0.547357 | 8_3:+6045875 | Msa1272440:CDS |
| CCGATCAGGAGCTAAAATCA+AGG | 0.549316 | 8_3:-6044664 | None:intergenic |
| GAGGTCTACAAGAGAATCTG+AGG | 0.555129 | 8_3:+6042318 | Msa1272440:CDS |
| CCACTTCGGCTCCTACTGAC+CGG | 0.557406 | 8_3:+6046798 | Msa1272440:CDS |
| TTGGATCTTACATCAACAAA+GGG | 0.558378 | 8_3:-6045899 | None:intergenic |
| AATCACTCTTCATGCCACTT+CGG | 0.560806 | 8_3:+6046784 | Msa1272440:CDS |
| AACGTGTGCAAAATGAGGCA+TGG | 0.561895 | 8_3:-6044640 | None:intergenic |
| TTACTAACCAAGTTTATCAA+GGG | 0.562268 | 8_3:-6045292 | None:intergenic |
| CGACATGGAGCAACATCAGT+TGG | 0.565377 | 8_3:+6044702 | Msa1272440:CDS |
| GATAAGTTTGGTCATCTCCT+CGG | 0.566470 | 8_3:-6045831 | None:intergenic |
| CCTACTGGTAACCTTCATGT+TGG | 0.570578 | 8_3:+6041759 | Msa1272440:CDS |
| CTACTGACCGGAAAACTCCA+TGG | 0.570865 | 8_3:+6046810 | Msa1272440:CDS |
| TAGCAAACAAATAGTTGAAG+AGG | 0.571397 | 8_3:-6041797 | None:intergenic |
| AAGGAAACGTGTGCAAAATG+AGG | 0.574116 | 8_3:-6044645 | None:intergenic |
| ACGTGTGCAAAATGAGGCAT+GGG | 0.576196 | 8_3:-6044639 | None:intergenic |
| AGGAGCGAAACGAACACGAA+CGG | 0.576837 | 8_3:-6041733 | None:intergenic |
| ATTGGATCTTACATCAACAA+AGG | 0.578328 | 8_3:-6045900 | None:intergenic |
| TTCCGGTTTCGTGTCCCCAA+AGG | 0.578886 | 8_3:+6043896 | Msa1272440:CDS |
| GTCCAAAGATCATGTTGTGA+AGG | 0.579139 | 8_3:+6046962 | Msa1272440:CDS |
| TACCTAGCATTATTAGGCTG+GGG | 0.586950 | 8_3:+6045243 | Msa1272440:CDS |
| CGGCAAATCAACTAAGCGCA+AGG | 0.588201 | 8_3:+6046483 | Msa1272440:CDS |
| CGTTGAGTAACGGAAGTCCA+TGG | 0.591189 | 8_3:+6041583 | Msa1272440:CDS |
| TTCTGGCACCACCAACATGA+AGG | 0.592711 | 8_3:-6041770 | None:intergenic |
| TTTGTACATAGAATTCCTCT+CGG | 0.592806 | 8_3:-6042524 | None:intergenic |
| AGTTTGGTCATCTCCTCGGA+TGG | 0.595441 | 8_3:-6045827 | None:intergenic |
| CTGTTCCGAAAGCTGAGACA+AGG | 0.595712 | 8_3:+6041543 | Msa1272440:five_prime_UTR |
| CCGGTCAGTAGGAGCCGAAG+TGG | 0.598440 | 8_3:-6046798 | None:intergenic |
| CGCCCCAGCCTAATAATGCT+AGG | 0.598880 | 8_3:-6045245 | None:intergenic |
| ATTGAACGTGTGAACAAAAG+TGG | 0.605324 | 8_3:+6045420 | Msa1272440:CDS |
| GGAGTAGCAAGCTTTGTCCA+TGG | 0.607246 | 8_3:-6041600 | None:intergenic |
| CTCTACATTCTACTTTACAA+AGG | 0.608024 | 8_3:+6046142 | Msa1272440:CDS |
| TTTACGAGCACGTCCATCCG+AGG | 0.608294 | 8_3:+6045814 | Msa1272440:CDS |
| TGAAGGTTACCAGTAGGAGA+AGG | 0.614462 | 8_3:-6041753 | None:intergenic |
| CCAAACTTATCGGAGAGCGT+TGG | 0.614591 | 8_3:+6045843 | Msa1272440:CDS |
| TACTGACTTAATACGAGGCG+AGG | 0.616955 | 8_3:+6043931 | Msa1272440:CDS |
| TTATTTGTAATTCAGAGCAG+AGG | 0.618259 | 8_3:+6044471 | Msa1272440:intron |
| GAGACAAGGAAATATGATGA+TGG | 0.621986 | 8_3:+6041557 | Msa1272440:exon |
| AGCAAACAAATAGTTGAAGA+GGG | 0.622093 | 8_3:-6041796 | None:intergenic |
| GAAGCAGCGATAAACTTGAC+CGG | 0.624608 | 8_3:-6042572 | None:intergenic |
| TTGAGGACACTGATTTGGAG+AGG | 0.627958 | 8_3:+6042299 | Msa1272440:CDS |
| ACAGGAACTAGAGAAAATGA+AGG | 0.637969 | 8_3:+6043769 | Msa1272440:intron |
| ATGGGCCAATGCAACAGATG+CGG | 0.639881 | 8_3:+6043835 | Msa1272440:CDS |
| ATGATGGCTGCGTTGAGTAA+CGG | 0.640360 | 8_3:+6041573 | Msa1272440:CDS |
| ACTCCATGGACCAGATATTG+GGG | 0.648416 | 8_3:+6046824 | Msa1272440:CDS |
| CTTTGTAAAGTAGAATGTAG+AGG | 0.650160 | 8_3:-6046141 | None:intergenic |
| CATTTACCTGTGTATACTGG+AGG | 0.661670 | 8_3:-6043815 | None:intergenic |
| GCTTCCTCACAATATCAGAA+GGG | 0.663856 | 8_3:+6045876 | Msa1272440:CDS |
| AAAATTACTGACTTAATACG+AGG | 0.667921 | 8_3:+6043926 | Msa1272440:CDS |
| CCAACATGAAGGTTACCAGT+AGG | 0.669006 | 8_3:-6041759 | None:intergenic |
| AGTTATTCATTGCCTCAGGT+AGG | 0.669899 | 8_3:-6045221 | None:intergenic |
| AGGGCCCTTCTGATATTGTG+AGG | 0.669985 | 8_3:-6045880 | None:intergenic |
| GTCTACAAGAGAATCTGAGG+AGG | 0.680680 | 8_3:+6042321 | Msa1272440:CDS |
| GACGGTTGATGATGCTACCA+TGG | 0.683136 | 8_3:+6044357 | Msa1272440:CDS |
| AGTAAATTATCAAAGCGACA+TGG | 0.695261 | 8_3:+6044687 | Msa1272440:CDS |
| GATGACATGAGAAATAGCCA+TGG | 0.699335 | 8_3:-6044374 | None:intergenic |
| AATTTACCTCCAGTATACAC+AGG | 0.700139 | 8_3:+6043809 | Msa1272440:CDS |
| GTCCATATAGACAATCCGAG+AGG | 0.749921 | 8_3:+6042509 | Msa1272440:CDS |
| GGAAATGGGATACCTACCTG+AGG | 0.749952 | 8_3:+6045209 | Msa1272440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATTCAATTTTTATTTC+TGG | + | chr8_3:6041867-6041886 | Msa1272440:intron | 10.0% |
| !!! | AAAATTCAATTTTTATTTCT+GGG | + | chr8_3:6041868-6041887 | Msa1272440:intron | 10.0% |
| !!! | AAAAATTCAATTTTTAATTC+TGG | + | chr8_3:6042001-6042020 | Msa1272440:intron | 10.0% |
| !!! | AAAATTCAATTTTTAATTCT+GGG | + | chr8_3:6042002-6042021 | Msa1272440:intron | 10.0% |
| !!! | AAAAATCAATTTTTTTATTC+TGG | + | chr8_3:6042097-6042116 | Msa1272440:intron | 10.0% |
| !!! | AAAATCAATTTTTTTATTCT+GGG | + | chr8_3:6042098-6042117 | Msa1272440:intron | 10.0% |
| !! | NNNNNNNCATTCAAAAAAAT+AGG | - | chr8_3:6043516-6043535 | None:intergenic | 10.0% |
| !! | ATAAAAAAAAAAAAGGATAA+GGG | - | chr8_3:6043979-6043998 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTTTTTGATCTT+AGG | + | chr8_3:6044795-6044814 | Msa1272440:intron | 10.0% |
| !!! | TTTTTTTTTTTTTGATCTTA+GGG | + | chr8_3:6044796-6044815 | Msa1272440:intron | 10.0% |
| !! | TGTAAAAAGTTATTAATATA+GGG | + | chr8_3:6044944-6044963 | Msa1272440:intron | 10.0% |
| !! | ATTATTATTTATTTATTGGA+AGG | - | chr8_3:6045739-6045758 | None:intergenic | 10.0% |
| !!! | TTTCTTTATACTTTTTAATT+AGG | + | chr8_3:6045774-6045793 | Msa1272440:intron | 10.0% |
| !!! | TATGTATATATTAATCTTTT+TGG | + | chr8_3:6046174-6046193 | Msa1272440:intron | 10.0% |
| !!! | GGTTTTCTATTTTTAATATT+CGG | + | chr8_3:6041921-6041940 | Msa1272440:intron | 15.0% |
| !! | AAAAATCAGAATTTGATTAT+GGG | + | chr8_3:6042202-6042221 | Msa1272440:intron | 15.0% |
| !!! | TTGGGTTTTATTTATATATT+TGG | + | chr8_3:6042427-6042446 | Msa1272440:intron | 15.0% |
| !! | CAAATATATTGTTAAAAAAC+AGG | - | chr8_3:6043135-6043154 | None:intergenic | 15.0% |
| !!! | NNNNNNNNNNTGTACCTTTT+AGG | + | chr8_3:6043619-6043638 | Msa1272440:intron | 15.0% |
| !! | GATAAAAAAAAAAAAGGATA+AGG | - | chr8_3:6043980-6043999 | None:intergenic | 15.0% |
| !!! | ATCCTTTTTTTTTTTTATCT+TGG | + | chr8_3:6043981-6044000 | Msa1272440:intron | 15.0% |
| !! | TACCAAGATAAAAAAAAAAA+AGG | - | chr8_3:6043986-6044005 | None:intergenic | 15.0% |
| !!! | TATCTTGGTATTTTTTTTTA+AGG | + | chr8_3:6043996-6044015 | Msa1272440:intron | 15.0% |
| !!! | ATTTTTTTTTAAGGTATGAT+TGG | + | chr8_3:6044005-6044024 | Msa1272440:intron | 15.0% |
| !! | TCTGAATTACAAATAATTTA+TGG | - | chr8_3:6044467-6044486 | None:intergenic | 15.0% |
| !! | CTGTAAAAAGTTATTAATAT+AGG | + | chr8_3:6044943-6044962 | Msa1272440:intron | 15.0% |
| !! | GTAAAAAGTTATTAATATAG+GGG | + | chr8_3:6044945-6044964 | Msa1272440:intron | 15.0% |
| !!! | ATGCAATACATTTTTTTTTA+TGG | - | chr8_3:6045496-6045515 | None:intergenic | 15.0% |
| !! | TTATTTATTCATAGAAAGTA+GGG | - | chr8_3:6045522-6045541 | None:intergenic | 15.0% |
| !! | TTTATTTATTCATAGAAAGT+AGG | - | chr8_3:6045523-6045542 | None:intergenic | 15.0% |
| !!! | TTTCCTTTATACTTTTAATT+AGG | + | chr8_3:6045943-6045962 | Msa1272440:intron | 15.0% |
| !!! | TGGCTTTTTTTTTAAAATTT+CGG | + | chr8_3:6046265-6046284 | Msa1272440:intron | 15.0% |
| !!! | AAATATGTTGATAATCTTAT+AGG | + | chr8_3:6046758-6046777 | Msa1272440:intron | 15.0% |
| !!! | AATATGTTGATAATCTTATA+GGG | + | chr8_3:6046759-6046778 | Msa1272440:intron | 15.0% |
| !! | AAAAAGCAAAAAGAAATTGA+GGG | - | chr8_3:6041840-6041859 | None:intergenic | 20.0% |
| !!! | TCTATTTTTAATATTCGGTT+TGG | + | chr8_3:6041926-6041945 | Msa1272440:intron | 20.0% |
| !!! | GTTATGATTTTTTATGTTCT+GGG | + | chr8_3:6042033-6042052 | Msa1272440:intron | 20.0% |
| !! | GAAAAATCAGAATTTGATTA+TGG | + | chr8_3:6042201-6042220 | Msa1272440:intron | 20.0% |
| !!! | GTTTTAATTTTGTATGTTCT+GGG | + | chr8_3:6042233-6042252 | Msa1272440:intron | 20.0% |
| !! | AGTATTATAACAACATAGAT+TGG | + | chr8_3:6042910-6042929 | Msa1272440:intron | 20.0% |
| !!! | TTCTATTTTCAATATATGGA+GGG | - | chr8_3:6043054-6043073 | None:intergenic | 20.0% |
| !!! | TTTCTATTTTCAATATATGG+AGG | - | chr8_3:6043055-6043074 | None:intergenic | 20.0% |
| !!! | CTGTTTCTATTTTCAATATA+TGG | - | chr8_3:6043058-6043077 | None:intergenic | 20.0% |
| !! | TTTAACAATATATTTGACCT+AGG | + | chr8_3:6043139-6043158 | Msa1272440:intron | 20.0% |
| !! | TTAACAATATATTTGACCTA+GGG | + | chr8_3:6043140-6043159 | Msa1272440:intron | 20.0% |
| !!! | AATTTTATTTGTCTTTACAC+AGG | + | chr8_3:6043751-6043770 | Msa1272440:intron | 20.0% |
| !!! | TAATTTTTAAACTTCCTTTG+GGG | - | chr8_3:6043913-6043932 | None:intergenic | 20.0% |
| !!! | GTAATTTTTAAACTTCCTTT+GGG | - | chr8_3:6043914-6043933 | None:intergenic | 20.0% |
| !!! | AGTAATTTTTAAACTTCCTT+TGG | - | chr8_3:6043915-6043934 | None:intergenic | 20.0% |
| !!! | TTTAGTTCCTATATAAATCT+TGG | + | chr8_3:6044865-6044884 | Msa1272440:intron | 20.0% |
| !! | GAGCTTACATTATAAATTAA+AGG | - | chr8_3:6045120-6045139 | None:intergenic | 20.0% |
| !! | TTACTATATTGAAGATAAAG+TGG | + | chr8_3:6045565-6045584 | Msa1272440:intron | 20.0% |
| !! | TACTATATTGAAGATAAAGT+GGG | + | chr8_3:6045566-6045585 | Msa1272440:intron | 20.0% |
| !!! | CTTTATACTTTTTAATTAGG+TGG | + | chr8_3:6045777-6045796 | Msa1272440:intron | 20.0% |
| !! | AAGAAAATATAAACGAACAA+GGG | - | chr8_3:6046557-6046576 | None:intergenic | 20.0% |
| !!! | CATTTCTTTAATCGAATTTT+TGG | + | chr8_3:6046577-6046596 | Msa1272440:intron | 20.0% |
| !! | AAATGCTTAGAGAAATTAAT+TGG | + | chr8_3:6046931-6046950 | Msa1272440:CDS | 20.0% |
| !! | AATGCTTAGAGAAATTAATT+GGG | + | chr8_3:6046932-6046951 | Msa1272440:CDS | 20.0% |
| !!! | TATTTTCCCTGTTATAATTT+TGG | + | chr8_3:6047139-6047158 | Msa1272440:three_prime_UTR | 20.0% |
| !! | CAAAAACCAAAATTATAACA+GGG | - | chr8_3:6047148-6047167 | None:intergenic | 20.0% |
| !! | TCAAAAACCAAAATTATAAC+AGG | - | chr8_3:6047149-6047168 | None:intergenic | 20.0% |
| !! | CAAAAAAACAAAAATCACTT+GGG | - | chr8_3:6047200-6047219 | None:intergenic | 20.0% |
| !! | ACAAAAAAACAAAAATCACT+TGG | - | chr8_3:6047201-6047220 | None:intergenic | 20.0% |
| ! | TACACTAGGTTAAAATTGAT+GGG | - | chr8_3:6041476-6041495 | None:intergenic | 25.0% |
| ! | TTACACTAGGTTAAAATTGA+TGG | - | chr8_3:6041477-6041496 | None:intergenic | 25.0% |
| ! | CAAAAAGCAAAAAGAAATTG+AGG | - | chr8_3:6041841-6041860 | None:intergenic | 25.0% |
| !!! | CAATTTTTATTTCTGGGTTT+TGG | + | chr8_3:6041874-6041893 | Msa1272440:intron | 25.0% |
| !!! | TGTTTTGAGTTTTTATGTCA+TGG | + | chr8_3:6041899-6041918 | Msa1272440:intron | 25.0% |
| !!! | GTTTTGAGTTTTTATGTCAT+GGG | + | chr8_3:6041900-6041919 | Msa1272440:intron | 25.0% |
| !!! | TGTTTTGATTTTTTGTGTTC+TGG | + | chr8_3:6041950-6041969 | Msa1272440:intron | 25.0% |
| !!! | GGTTATGATTTTTTATGTTC+TGG | + | chr8_3:6042032-6042051 | Msa1272440:intron | 25.0% |
| !!! | TTTTTTATTCTGGGTTTGAA+TGG | + | chr8_3:6042107-6042126 | Msa1272440:intron | 25.0% |
| !!! | GGTTTTAATTTTGTATGTTC+TGG | + | chr8_3:6042232-6042251 | Msa1272440:intron | 25.0% |
| !!! | AATGTTTTTTTCAGGTCTAA+AGG | + | chr8_3:6042256-6042275 | Msa1272440:intron | 25.0% |
| !!! | GAAATTTGTTTTGAGAATTG+AGG | + | chr8_3:6042282-6042301 | Msa1272440:CDS | 25.0% |
| ! | CACTCGGTTTAAAAATAAAA+GGG | - | chr8_3:6042735-6042754 | None:intergenic | 25.0% |
| ! | TGGAAAAAGAAAAATCCTTA+AGG | + | chr8_3:6042759-6042778 | Msa1272440:intron | 25.0% |
| !! | TACAAAATCCCTCTAATTTT+GGG | - | chr8_3:6042993-6043012 | None:intergenic | 25.0% |
| !! | ATACAAAATCCCTCTAATTT+TGG | - | chr8_3:6042994-6043013 | None:intergenic | 25.0% |
| !!! | AAAATTACTGACTTAATACG+AGG | + | chr8_3:6043926-6043945 | Msa1272440:CDS | 25.0% |
| ! | AAAAAAAAAAAGGATAAGGG+CGG | - | chr8_3:6043976-6043995 | None:intergenic | 25.0% |
| !!! | TACTTCATTTTTGAACTACA+TGG | - | chr8_3:6044043-6044062 | None:intergenic | 25.0% |
| !! | AGTTTATAACTTTTGTGTGA+CGG | + | chr8_3:6044339-6044358 | Msa1272440:CDS | 25.0% |
| ! | AAGGCAAGCATTAATATATA+AGG | + | chr8_3:6044513-6044532 | Msa1272440:CDS | 25.0% |
| !! | TATAATCTTTTATCGCATCT+TGG | + | chr8_3:6044557-6044576 | Msa1272440:intron | 25.0% |
| !!! | ATCGTTCTTAAAGTTTTATG+AGG | + | chr8_3:6044758-6044777 | Msa1272440:intron | 25.0% |
| ! | ATAAGGACCAAGATTTATAT+AGG | - | chr8_3:6044875-6044894 | None:intergenic | 25.0% |
| ! | ATTAATATAGGGGCTAAAAT+TGG | + | chr8_3:6044955-6044974 | Msa1272440:intron | 25.0% |
| ! | TTAATATAGGGGCTAAAATT+GGG | + | chr8_3:6044956-6044975 | Msa1272440:intron | 25.0% |
| ! | AATAACTACCTAGCATTATT+AGG | + | chr8_3:6045237-6045256 | Msa1272440:CDS | 25.0% |
| ! | TTACTAACCAAGTTTATCAA+GGG | - | chr8_3:6045295-6045314 | None:intergenic | 25.0% |
| ! | TTTACTAACCAAGTTTATCA+AGG | - | chr8_3:6045296-6045315 | None:intergenic | 25.0% |
| ! | TAAACTTGGTTAGTAAATTC+TGG | + | chr8_3:6045299-6045318 | Msa1272440:intron | 25.0% |
| !! | AAGTTGTGAAAACATTTTTC+TGG | - | chr8_3:6045352-6045371 | None:intergenic | 25.0% |
| !!! | TTTTTGATTCCACAAAGTTA+AGG | + | chr8_3:6045448-6045467 | Msa1272440:CDS | 25.0% |
| ! | TTCAATATAGTAAAACCATG+AGG | - | chr8_3:6045558-6045577 | None:intergenic | 25.0% |
| ! | ATCTTAAAGTTGCTTATAAC+AGG | + | chr8_3:6045598-6045617 | Msa1272440:intron | 25.0% |
| !!! | TTTTTAATTAGGTGGATGAA+TGG | + | chr8_3:6045785-6045804 | Msa1272440:intron | 25.0% |
| !! | CCACCTAATTAAAAGTATAA+AGG | - | chr8_3:6045949-6045968 | None:intergenic | 25.0% |
| !!! | CCTTTATACTTTTAATTAGG+TGG | + | chr8_3:6045946-6045965 | Msa1272440:intron | 25.0% |
| !!! | TTATACTTTTAATTAGGTGG+AGG | + | chr8_3:6045949-6045968 | Msa1272440:intron | 25.0% |
| ! | CACACTAAATAAATCACAAT+TGG | - | chr8_3:6046021-6046040 | None:intergenic | 25.0% |
| ! | CAATTGTGATTTATTTAGTG+TGG | + | chr8_3:6046019-6046038 | Msa1272440:intron | 25.0% |
| ! | GGAATTAATAAACCTACTTA+AGG | + | chr8_3:6046062-6046081 | Msa1272440:intron | 25.0% |
| ! | TTAATAAACCTACTTAAGGA+TGG | + | chr8_3:6046066-6046085 | Msa1272440:CDS | 25.0% |
| ! | TAATAAACCTACTTAAGGAT+GGG | + | chr8_3:6046067-6046086 | Msa1272440:CDS | 25.0% |
| ! | GATATTCCTAATTGTATCAT+TGG | + | chr8_3:6046196-6046215 | Msa1272440:intron | 25.0% |
| !!! | CAATCATGTTCATTTTTAGA+AGG | - | chr8_3:6046222-6046241 | None:intergenic | 25.0% |
| ! | ACAATCAATAAAAGGAGATA+TGG | - | chr8_3:6046302-6046321 | None:intergenic | 25.0% |
| ! | GAAGAAAATATAAACGAACA+AGG | - | chr8_3:6046558-6046577 | None:intergenic | 25.0% |
| ! | TAATTGAGAATTCACCTTAA+AGG | + | chr8_3:6047002-6047021 | Msa1272440:exon | 25.0% |
| !!! | AGTACCAATTTGTTTTTGTT+GGG | + | chr8_3:6047103-6047122 | Msa1272440:three_prime_UTR | 25.0% |
| !!! | ATGCGTTTTTTCTTTACACT+AGG | - | chr8_3:6041490-6041509 | None:intergenic | 30.0% |
| TGTAAGAAGAGTAAGATTGA+TGG | - | chr8_3:6041647-6041666 | None:intergenic | 30.0% | |
| AGCAAACAAATAGTTGAAGA+GGG | - | chr8_3:6041799-6041818 | None:intergenic | 30.0% | |
| TAGCAAACAAATAGTTGAAG+AGG | - | chr8_3:6041800-6041819 | None:intergenic | 30.0% | |
| TCTTCAACTATTTGTTTGCT+AGG | + | chr8_3:6041799-6041818 | Msa1272440:CDS | 30.0% | |
| !! | TTTTTAATTCTGGGTATTGC+TGG | + | chr8_3:6042011-6042030 | Msa1272440:intron | 30.0% |
| !!! | GATTTTTTATGTTCTGGGTT+TGG | + | chr8_3:6042038-6042057 | Msa1272440:intron | 30.0% |
| !!! | TGTTTTGAGTTTTCATGTTC+TGG | + | chr8_3:6042144-6042163 | Msa1272440:intron | 30.0% |
| TCAGAATTTGATTATGGGTT+TGG | + | chr8_3:6042207-6042226 | Msa1272440:intron | 30.0% | |
| !!! | TTTTTTTCAGGTCTAAAGGT+GGG | + | chr8_3:6042260-6042279 | Msa1272440:intron | 30.0% |
| !! | TTTGTTGTTGTTGTTGTTGT+TGG | + | chr8_3:6042408-6042427 | Msa1272440:intron | 30.0% |
| ! | TTGTTGTTGTTGTTGTTGTT+GGG | + | chr8_3:6042409-6042428 | Msa1272440:intron | 30.0% |
| ATGATGTGATTGTGATTGTT+AGG | + | chr8_3:6042463-6042482 | Msa1272440:intron | 30.0% | |
| TGATGTGATTGTGATTGTTA+GGG | + | chr8_3:6042464-6042483 | Msa1272440:intron | 30.0% | |
| TTTGTACATAGAATTCCTCT+CGG | - | chr8_3:6042527-6042546 | None:intergenic | 30.0% | |
| TGACAATCTCTTACTTGTAA+TGG | + | chr8_3:6042623-6042642 | Msa1272440:intron | 30.0% | |
| ! | ATCTCTTACTTGTAATGGAA+TGG | + | chr8_3:6042628-6042647 | Msa1272440:intron | 30.0% |
| ! | AACTATGTGTGATGTGTTTT+AGG | + | chr8_3:6042683-6042702 | Msa1272440:intron | 30.0% |
| ! | ACTATGTGTGATGTGTTTTA+GGG | + | chr8_3:6042684-6042703 | Msa1272440:intron | 30.0% |
| ATAAAAGGGATACATGCAAA+TGG | - | chr8_3:6042721-6042740 | None:intergenic | 30.0% | |
| GCACTCGGTTTAAAAATAAA+AGG | - | chr8_3:6042736-6042755 | None:intergenic | 30.0% | |
| ! | ATTTTTAAACCGAGTGCATT+TGG | + | chr8_3:6042739-6042758 | Msa1272440:intron | 30.0% |
| ! | TTTCTTTTTCCAAATGCACT+CGG | - | chr8_3:6042751-6042770 | None:intergenic | 30.0% |
| !! | AAAATCCTTAAGGCTTTGTT+TGG | + | chr8_3:6042769-6042788 | Msa1272440:intron | 30.0% |
| !! | AAATCCTTAAGGCTTTGTTT+GGG | + | chr8_3:6042770-6042789 | Msa1272440:intron | 30.0% |
| TCTACCAAATCACTCAAATA+AGG | - | chr8_3:6042847-6042866 | None:intergenic | 30.0% | |
| ! | ACAAAATCCCTCTAATTTTG+GGG | - | chr8_3:6042992-6043011 | None:intergenic | 30.0% |
| ! | TTCAATATATGGAGGGTTTT+AGG | - | chr8_3:6043047-6043066 | None:intergenic | 30.0% |
| !! | CTAGTTGATAAGCTCAAATA+AGG | - | chr8_3:6043179-6043198 | None:intergenic | 30.0% |
| AATAAGCTGTTTATCCAAAC+AGG | + | chr8_3:6043368-6043387 | Msa1272440:intron | 30.0% | |
| ATAAGCTGTTTATCCAAACA+GGG | + | chr8_3:6043369-6043388 | Msa1272440:intron | 30.0% | |
| !! | TTATTTTGCATCCATTCAAC+TGG | + | chr8_3:6043448-6043467 | Msa1272440:intron | 30.0% |
| TGAACTAAAAACCAGTTGAA+TGG | - | chr8_3:6043462-6043481 | None:intergenic | 30.0% | |
| !!! | CTGGTTTTTAGTTCAGTTTA+TGG | + | chr8_3:6043467-6043486 | Msa1272440:intron | 30.0% |
| ATCTCGTACTTATTCCTAAA+AGG | - | chr8_3:6043636-6043655 | None:intergenic | 30.0% | |
| ATATACATGCTTCAAACTAG+AGG | - | chr8_3:6043704-6043723 | None:intergenic | 30.0% | |
| ! | ATTTTTGAACTACATGGAGT+AGG | - | chr8_3:6044037-6044056 | None:intergenic | 30.0% |
| ! | CAGTTGACTTATGAATATGA+AGG | - | chr8_3:6044088-6044107 | None:intergenic | 30.0% |
| TTTCTTTGTTAGTGTCTTGA+AGG | + | chr8_3:6044258-6044277 | Msa1272440:intron | 30.0% | |
| !! | TTGGAGATTTTGTGATAATG+AGG | + | chr8_3:6044302-6044321 | Msa1272440:CDS | 30.0% |
| ! | TTTGTGATAATGAGGAGTAA+TGG | + | chr8_3:6044310-6044329 | Msa1272440:CDS | 30.0% |
| GTCACACAAAAGTTATAAAC+TGG | - | chr8_3:6044340-6044359 | None:intergenic | 30.0% | |
| TTATTTGTAATTCAGAGCAG+AGG | + | chr8_3:6044471-6044490 | Msa1272440:intron | 30.0% | |
| ! | TTTGATAATTTACTCCGATC+AGG | - | chr8_3:6044681-6044700 | None:intergenic | 30.0% |
| AGTAAATTATCAAAGCGACA+TGG | + | chr8_3:6044687-6044706 | Msa1272440:CDS | 30.0% | |
| ! | ACTTTAAGAACGATGTAATC+AGG | - | chr8_3:6044752-6044771 | None:intergenic | 30.0% |
| GTTCCTATTAAAGCAGAATA+AGG | - | chr8_3:6044892-6044911 | None:intergenic | 30.0% | |
| ATAAAGCTTCTTCTCTTCTA+AGG | + | chr8_3:6045142-6045161 | Msa1272440:intron | 30.0% | |
| TAAAGCTTCTTCTCTTCTAA+GGG | + | chr8_3:6045143-6045162 | Msa1272440:intron | 30.0% | |
| TTTCTCATACCTTAACTTTG+TGG | - | chr8_3:6045460-6045479 | None:intergenic | 30.0% | |
| AGTTGCTTATAACAGGTAAT+AGG | + | chr8_3:6045605-6045624 | Msa1272440:intron | 30.0% | |
| ATAACAGGTAATAGGATGTA+TGG | + | chr8_3:6045613-6045632 | Msa1272440:intron | 30.0% | |
| TTGGATCTTACATCAACAAA+GGG | - | chr8_3:6045902-6045921 | None:intergenic | 30.0% | |
| ATTGGATCTTACATCAACAA+AGG | - | chr8_3:6045903-6045922 | None:intergenic | 30.0% | |
| GAATCAAGTATGCAAGTAAT+TGG | - | chr8_3:6045921-6045940 | None:intergenic | 30.0% | |
| CTTTGTAAAGTAGAATGTAG+AGG | - | chr8_3:6046144-6046163 | None:intergenic | 30.0% | |
| CTCTACATTCTACTTTACAA+AGG | + | chr8_3:6046142-6046161 | Msa1272440:CDS | 30.0% | |
| AAGTTGGCACAATCAATAAA+AGG | - | chr8_3:6046310-6046329 | None:intergenic | 30.0% | |
| TGCTAACATAGTTGGAATAT+CGG | + | chr8_3:6046628-6046647 | Msa1272440:intron | 30.0% | |
| AAAAGTAAAATGACATGCAC+AGG | - | chr8_3:6046676-6046695 | None:intergenic | 30.0% | |
| TGTTATCAGATAGACCTTTA+AGG | - | chr8_3:6047019-6047038 | None:intergenic | 30.0% | |
| !!! | GAGTACCAATTTGTTTTTGT+TGG | + | chr8_3:6047102-6047121 | Msa1272440:three_prime_UTR | 30.0% |
| AAAAACAAAAATCACTTGGG+AGG | - | chr8_3:6047197-6047216 | None:intergenic | 30.0% | |
| TATTTCCTTGTCTCAGCTTT+CGG | - | chr8_3:6041551-6041570 | None:intergenic | 35.0% | |
| GAGACAAGGAAATATGATGA+TGG | + | chr8_3:6041557-6041576 | Msa1272440:exon | 35.0% | |
| AGAAATGGAAATGGAAGAGA+TGG | - | chr8_3:6041624-6041643 | None:intergenic | 35.0% | |
| GATTGATGGAGAAATGGAAA+TGG | - | chr8_3:6041633-6041652 | None:intergenic | 35.0% | |
| GAGTAAGATTGATGGAGAAA+TGG | - | chr8_3:6041639-6041658 | None:intergenic | 35.0% | |
| ! | ATTCTGGGTTTGAATGGTTT+TGG | + | chr8_3:6042113-6042132 | Msa1272440:intron | 35.0% |
| ! | TTCTGGGTTTGAATGGTTTT+GGG | + | chr8_3:6042114-6042133 | Msa1272440:intron | 35.0% |
| !!! | GAGTTTTCATGTTCTGGTTT+TGG | + | chr8_3:6042150-6042169 | Msa1272440:intron | 35.0% |
| AATTTGATTATGGGTTTGGC+TGG | + | chr8_3:6042211-6042230 | Msa1272440:intron | 35.0% | |
| !!! | GTTCTGGGAATGTTTTTTTC+AGG | + | chr8_3:6042248-6042267 | Msa1272440:intron | 35.0% |
| !!! | GTTTTTTTCAGGTCTAAAGG+TGG | + | chr8_3:6042259-6042278 | Msa1272440:intron | 35.0% |
| !!! | ATGTGTTTTAGGGAAGCTTA+AGG | + | chr8_3:6042694-6042713 | Msa1272440:intron | 35.0% |
| !!! | TGTGTTTTAGGGAAGCTTAA+GGG | + | chr8_3:6042695-6042714 | Msa1272440:intron | 35.0% |
| ! | CACACCTTATTTGAGTGATT+TGG | + | chr8_3:6042840-6042859 | Msa1272440:intron | 35.0% |
| !! | TTGAGTGATTTGGTAGAGAA+TGG | + | chr8_3:6042850-6042869 | Msa1272440:intron | 35.0% |
| ! | TACAGGACAAGGATTTTGAA+GGG | - | chr8_3:6042956-6042975 | None:intergenic | 35.0% |
| CTCAAAAAATGTACAGGACA+AGG | - | chr8_3:6042967-6042986 | None:intergenic | 35.0% | |
| ! | TTTGAGTTCCCCAAAATTAG+AGG | + | chr8_3:6042981-6043000 | Msa1272440:intron | 35.0% |
| TTGAGTTCCCCAAAATTAGA+GGG | + | chr8_3:6042982-6043001 | Msa1272440:intron | 35.0% | |
| !!! | ATATATGGAGGGTTTTAGGA+GGG | - | chr8_3:6043043-6043062 | None:intergenic | 35.0% |
| !!! | AATATATGGAGGGTTTTAGG+AGG | - | chr8_3:6043044-6043063 | None:intergenic | 35.0% |
| ATGATCTGTGATGATAGCAT+CGG | + | chr8_3:6043083-6043102 | Msa1272440:intron | 35.0% | |
| AATAGGAAACCTTGCTGAAA+AGG | - | chr8_3:6043499-6043518 | None:intergenic | 35.0% | |
| ACAGGAACTAGAGAAAATGA+AGG | + | chr8_3:6043769-6043788 | Msa1272440:intron | 35.0% | |
| AATTTACCTCCAGTATACAC+AGG | + | chr8_3:6043809-6043828 | Msa1272440:CDS | 35.0% | |
| TCCAGTATACACAGGTAAAT+GGG | + | chr8_3:6043817-6043836 | Msa1272440:CDS | 35.0% | |
| AAGGAACTCCTTATACATTC+CGG | + | chr8_3:6043879-6043898 | Msa1272440:CDS | 35.0% | |
| CATTAATCCACTGTTTCGAA+GGG | - | chr8_3:6044152-6044171 | None:intergenic | 35.0% | |
| ACATTAATCCACTGTTTCGA+AGG | - | chr8_3:6044153-6044172 | None:intergenic | 35.0% | |
| TTAGTGTCTTGAAGGTTAGT+TGG | + | chr8_3:6044266-6044285 | Msa1272440:intron | 35.0% | |
| ! | CTTGAAGGTTAGTTGGAATT+TGG | + | chr8_3:6044273-6044292 | Msa1272440:intron | 35.0% |
| AGTTGGAATTTGGATACACT+TGG | + | chr8_3:6044283-6044302 | Msa1272440:CDS | 35.0% | |
| TTTCTCATGTCATCAGGTAA+TGG | + | chr8_3:6044383-6044402 | Msa1272440:intron | 35.0% | |
| AGCATTTACCAAACACTCTA+AGG | + | chr8_3:6044494-6044513 | Msa1272440:CDS | 35.0% | |
| ACGATGTAATCAGGAAATGA+TGG | - | chr8_3:6044743-6044762 | None:intergenic | 35.0% | |
| GGTCCTTATTCTGCTTTAAT+AGG | + | chr8_3:6044886-6044905 | Msa1272440:intron | 35.0% | |
| TAGGAACTGAATACAGATAC+AGG | + | chr8_3:6044905-6044924 | Msa1272440:intron | 35.0% | |
| AGGAACTGAATACAGATACA+GGG | + | chr8_3:6044906-6044925 | Msa1272440:intron | 35.0% | |
| CAAAACTAGTCGACTGAAAT+TGG | - | chr8_3:6045082-6045101 | None:intergenic | 35.0% | |
| AAGGGTGAAGAACTCATTAT+CGG | - | chr8_3:6045277-6045296 | None:intergenic | 35.0% | |
| TTCTTCACCCTTGATAAACT+TGG | + | chr8_3:6045285-6045304 | Msa1272440:CDS | 35.0% | |
| ATTGAACGTGTGAACAAAAG+TGG | + | chr8_3:6045420-6045439 | Msa1272440:CDS | 35.0% | |
| !!! | CTTCGAGTGTTTTTGCTATT+AGG | + | chr8_3:6045683-6045702 | Msa1272440:intron | 35.0% |
| ATTAGCAGCAAAACTTTGCA+AGG | - | chr8_3:6045712-6045731 | None:intergenic | 35.0% | |
| ! | GTGTTGTTACATCTTGTAAC+AGG | + | chr8_3:6046041-6046060 | Msa1272440:intron | 35.0% |
| AGAAGGCCAATGATACAATT+AGG | - | chr8_3:6046205-6046224 | None:intergenic | 35.0% | |
| GAACATGATTGTGATATGCA+AGG | + | chr8_3:6046231-6046250 | Msa1272440:intron | 35.0% | |
| CTCAGGAAGATTATCTTGTA+TGG | - | chr8_3:6046368-6046387 | None:intergenic | 35.0% | |
| TATGATAGCAGTGATCTTGT+AGG | + | chr8_3:6046412-6046431 | Msa1272440:CDS | 35.0% | |
| AAAAATTGGGTCAAAGGCTT+CGG | + | chr8_3:6046463-6046482 | Msa1272440:CDS | 35.0% | |
| GGAAAGTCTCAAACATGATT+CGG | + | chr8_3:6046517-6046536 | Msa1272440:intron | 35.0% | |
| ! | CTCAAACATGATTCGGATTT+AGG | + | chr8_3:6046524-6046543 | Msa1272440:intron | 35.0% |
| !!! | TTTTGGTTTGCTGTGATTGT+CGG | + | chr8_3:6046594-6046613 | Msa1272440:intron | 35.0% |
| TTAGTGTGTGCTAACATAGT+TGG | + | chr8_3:6046620-6046639 | Msa1272440:intron | 35.0% | |
| TTGTCTTGCTTTATCAAGCT+GGG | + | chr8_3:6046853-6046872 | Msa1272440:CDS | 35.0% | |
| ATTGTCACAAAGCTAACTTC+AGG | - | chr8_3:6046897-6046916 | None:intergenic | 35.0% | |
| AGGTCTATCTGATAACACTA+TGG | + | chr8_3:6047022-6047041 | Msa1272440:three_prime_UTR | 35.0% | |
| ! | GGTTTTGCACTTCTATTTAG+AGG | + | chr8_3:6047043-6047062 | Msa1272440:three_prime_UTR | 35.0% |
| !!! | ACCAATTTGTTTTTGTTGGG+AGG | + | chr8_3:6047106-6047125 | Msa1272440:three_prime_UTR | 35.0% |
| ACCTCCCAACAAAAACAAAT+TGG | - | chr8_3:6047110-6047129 | None:intergenic | 35.0% | |
| !!! | AATTTGTTTTTGTTGGGAGG+TGG | + | chr8_3:6047109-6047128 | Msa1272440:three_prime_UTR | 35.0% |
| !!! | GGTTTGAATGGTTTTGGGTT+TGG | + | chr8_3:6042119-6042138 | Msa1272440:intron | 40.0% |
| ! | GAGAATTGAGGACACTGATT+TGG | + | chr8_3:6042294-6042313 | Msa1272440:CDS | 40.0% |
| CAGTGCTTAGAGATCTTACT+TGG | + | chr8_3:6042344-6042363 | Msa1272440:CDS | 40.0% | |
| CTTAGAGATCTTACTTGGCT+TGG | + | chr8_3:6042349-6042368 | Msa1272440:CDS | 40.0% | |
| TTCTACCTTCATCCCAATCA+AGG | - | chr8_3:6042375-6042394 | None:intergenic | 40.0% | |
| TTCCTCTCGGATTGTCTATA+TGG | - | chr8_3:6042514-6042533 | None:intergenic | 40.0% | |
| GCTGAGAAACTACTTCAATC+CGG | + | chr8_3:6042553-6042572 | Msa1272440:CDS | 40.0% | |
| AACTCCCAAACAAAGCCTTA+AGG | - | chr8_3:6042777-6042796 | None:intergenic | 40.0% | |
| !! | GCTTTGTTTGGGAGTTTGAA+GGG | + | chr8_3:6042781-6042800 | Msa1272440:intron | 40.0% |
| ! | CTTTGTTTGGGAGTTTGAAG+GGG | + | chr8_3:6042782-6042801 | Msa1272440:intron | 40.0% |
| ! | GTACAGGACAAGGATTTTGA+AGG | - | chr8_3:6042957-6042976 | None:intergenic | 40.0% |
| GGGGAACTCAAAAAATGTAC+AGG | - | chr8_3:6042973-6042992 | None:intergenic | 40.0% | |
| GAGCACTTGTGACATTCTTT+CGG | + | chr8_3:6043202-6043221 | Msa1272440:intron | 40.0% | |
| AAGCTATGCTAGAGAGCTTA+TGG | - | chr8_3:6043281-6043300 | None:intergenic | 40.0% | |
| ! | TTATCCAAACAGGGCATTAC+TGG | + | chr8_3:6043378-6043397 | Msa1272440:intron | 40.0% |
| ! | TTTTCCAGTAATGCCCTGTT+TGG | - | chr8_3:6043385-6043404 | None:intergenic | 40.0% |
| GAAGAACAAAGCAGTAGCTA+AGG | - | chr8_3:6043413-6043432 | None:intergenic | 40.0% | |
| ! | TGGAAACTTCCTTTTCAGCA+AGG | + | chr8_3:6043487-6043506 | Msa1272440:intron | 40.0% |
| GGAATAAGTACGAGATTGTG+AGG | + | chr8_3:6043640-6043659 | Msa1272440:intron | 40.0% | |
| CATTTACCTGTGTATACTGG+AGG | - | chr8_3:6043818-6043837 | None:intergenic | 40.0% | |
| CTCCAGTATACACAGGTAAA+TGG | + | chr8_3:6043816-6043835 | Msa1272440:CDS | 40.0% | |
| ACACGAAACCGGAATGTATA+AGG | - | chr8_3:6043890-6043909 | None:intergenic | 40.0% | |
| GATGACATGAGAAATAGCCA+TGG | - | chr8_3:6044377-6044396 | None:intergenic | 40.0% | |
| !! | TGGCTATTTCTCATGTCATC+AGG | + | chr8_3:6044377-6044396 | Msa1272440:CDS | 40.0% |
| ! | AATGCTTGCCTTAGAGTGTT+TGG | - | chr8_3:6044505-6044524 | None:intergenic | 40.0% |
| CTGTGCATGAATCTGTTTAC+AGG | + | chr8_3:6044605-6044624 | Msa1272440:intron | 40.0% | |
| AAGGAAACGTGTGCAAAATG+AGG | - | chr8_3:6044648-6044667 | None:intergenic | 40.0% | |
| !!! | CCTTGATTTTAGCTCCTGAT+CGG | + | chr8_3:6044664-6044683 | Msa1272440:CDS | 40.0% |
| ACTGATATTGTGACACCACT+TGG | + | chr8_3:6044982-6045001 | Msa1272440:intron | 40.0% | |
| CTGATATTGTGACACCACTT+GGG | + | chr8_3:6044983-6045002 | Msa1272440:intron | 40.0% | |
| TAGTCGACTGAAATTGGTAC+CGG | - | chr8_3:6045076-6045095 | None:intergenic | 40.0% | |
| AGTTATTCATTGCCTCAGGT+AGG | - | chr8_3:6045224-6045243 | None:intergenic | 40.0% | |
| AGGTAGTTATTCATTGCCTC+AGG | - | chr8_3:6045228-6045247 | None:intergenic | 40.0% | |
| ACTACCTAGCATTATTAGGC+TGG | + | chr8_3:6045241-6045260 | Msa1272440:CDS | 40.0% | |
| CTACCTAGCATTATTAGGCT+GGG | + | chr8_3:6045242-6045261 | Msa1272440:CDS | 40.0% | |
| TACCTAGCATTATTAGGCTG+GGG | + | chr8_3:6045243-6045262 | Msa1272440:CDS | 40.0% | |
| AAATCCTGTGTTCTTCCTCA+TGG | + | chr8_3:6045540-6045559 | Msa1272440:intron | 40.0% | |
| AAAACCATGAGGAAGAACAC+AGG | - | chr8_3:6045547-6045566 | None:intergenic | 40.0% | |
| GATAAGTTTGGTCATCTCCT+CGG | - | chr8_3:6045834-6045853 | None:intergenic | 40.0% | |
| GAGGAGATGACCAAACTTAT+CGG | + | chr8_3:6045833-6045852 | Msa1272440:CDS | 40.0% | |
| GCTTCCTCACAATATCAGAA+GGG | + | chr8_3:6045876-6045895 | Msa1272440:CDS | 40.0% | |
| AGTCAATCCCATCCTTAAGT+AGG | - | chr8_3:6046077-6046096 | None:intergenic | 40.0% | |
| TATGCAAGGCTGTATGAGTT+TGG | + | chr8_3:6046245-6046264 | Msa1272440:intron | 40.0% | |
| ! | AACATGATTCGGATTTAGGC+CGG | + | chr8_3:6046528-6046547 | Msa1272440:intron | 40.0% |
| TATAAACGAACAAGGGTGAC+CGG | - | chr8_3:6046550-6046569 | None:intergenic | 40.0% | |
| ! | AATCACTCTTCATGCCACTT+CGG | + | chr8_3:6046784-6046803 | Msa1272440:CDS | 40.0% |
| AAACTCCATGGACCAGATAT+TGG | + | chr8_3:6046822-6046841 | Msa1272440:CDS | 40.0% | |
| AACTCCATGGACCAGATATT+GGG | + | chr8_3:6046823-6046842 | Msa1272440:CDS | 40.0% | |
| GTTGTCTTGCTTTATCAAGC+TGG | + | chr8_3:6046852-6046871 | Msa1272440:CDS | 40.0% | |
| GTCCAAAGATCATGTTGTGA+AGG | + | chr8_3:6046962-6046981 | Msa1272440:CDS | 40.0% | |
| CTCCTTCACAACATGATCTT+TGG | - | chr8_3:6046967-6046986 | None:intergenic | 40.0% | |
| ATGATGGCTGCGTTGAGTAA+CGG | + | chr8_3:6041573-6041592 | Msa1272440:CDS | 45.0% | |
| GACAGAGAATTTGCGTCGAA+AGG | - | chr8_3:6041685-6041704 | None:intergenic | 45.0% | |
| TGAAGGTTACCAGTAGGAGA+AGG | - | chr8_3:6041756-6041775 | None:intergenic | 45.0% | |
| CCAACATGAAGGTTACCAGT+AGG | - | chr8_3:6041762-6041781 | None:intergenic | 45.0% | |
| CCTACTGGTAACCTTCATGT+TGG | + | chr8_3:6041759-6041778 | Msa1272440:CDS | 45.0% | |
| ACTGGTAACCTTCATGTTGG+TGG | + | chr8_3:6041762-6041781 | Msa1272440:CDS | 45.0% | |
| ATAGTTGAAGAGGGCAGTTC+TGG | - | chr8_3:6041790-6041809 | None:intergenic | 45.0% | |
| !! | TTGAGGACACTGATTTGGAG+AGG | + | chr8_3:6042299-6042318 | Msa1272440:CDS | 45.0% |
| GAGGTCTACAAGAGAATCTG+AGG | + | chr8_3:6042318-6042337 | Msa1272440:CDS | 45.0% | |
| GTCTACAAGAGAATCTGAGG+AGG | + | chr8_3:6042321-6042340 | Msa1272440:CDS | 45.0% | |
| !! | TTACTTGGCTTGGCCTTGAT+TGG | + | chr8_3:6042359-6042378 | Msa1272440:CDS | 45.0% |
| !! | TACTTGGCTTGGCCTTGATT+GGG | + | chr8_3:6042360-6042379 | Msa1272440:CDS | 45.0% |
| TGATTGTGATTGTTAGGGCC+CGG | + | chr8_3:6042469-6042488 | Msa1272440:intron | 45.0% | |
| GTCCATATAGACAATCCGAG+AGG | + | chr8_3:6042509-6042528 | Msa1272440:CDS | 45.0% | |
| GAAGCAGCGATAAACTTGAC+CGG | - | chr8_3:6042575-6042594 | None:intergenic | 45.0% | |
| TCGCTGCTTCTGTTCTAATG+AGG | + | chr8_3:6042585-6042604 | Msa1272440:CDS | 45.0% | |
| !! | GGCTTTGTTTGGGAGTTTGA+AGG | + | chr8_3:6042780-6042799 | Msa1272440:intron | 45.0% |
| TATTTGACCTAGGGCCTGTT+TGG | + | chr8_3:6043149-6043168 | Msa1272440:intron | 45.0% | |
| ATTTGACCTAGGGCCTGTTT+GGG | + | chr8_3:6043150-6043169 | Msa1272440:intron | 45.0% | |
| TCAAATAAGGCAGCCCAAAC+AGG | - | chr8_3:6043166-6043185 | None:intergenic | 45.0% | |
| GCCCATTTACCTGTGTATAC+TGG | - | chr8_3:6043821-6043840 | None:intergenic | 45.0% | |
| TACTTCCGCATCTGTTGCAT+TGG | - | chr8_3:6043843-6043862 | None:intergenic | 45.0% | |
| GTAGAAGAAGAGCTGGCAAA+AGG | + | chr8_3:6043860-6043879 | Msa1272440:CDS | 45.0% | |
| !! | TACTGACTTAATACGAGGCG+AGG | + | chr8_3:6043931-6043950 | Msa1272440:CDS | 45.0% |
| !!! | CGCATCTTGGTCACTGATTT+TGG | + | chr8_3:6044570-6044589 | Msa1272440:intron | 45.0% |
| ACGTGTGCAAAATGAGGCAT+GGG | - | chr8_3:6044642-6044661 | None:intergenic | 45.0% | |
| AACGTGTGCAAAATGAGGCA+TGG | - | chr8_3:6044643-6044662 | None:intergenic | 45.0% | |
| CCGATCAGGAGCTAAAATCA+AGG | - | chr8_3:6044667-6044686 | None:intergenic | 45.0% | |
| TATTGTGACACCACTTGGGT+TGG | + | chr8_3:6044987-6045006 | Msa1272440:intron | 45.0% | |
| AGTCGACTGAAATTGGTACC+GGG | - | chr8_3:6045075-6045094 | None:intergenic | 45.0% | |
| CTGCAAGACAGCAGATATTG+AGG | - | chr8_3:6045184-6045203 | None:intergenic | 45.0% | |
| TATCTGCTGTCTTGCAGTAC+AGG | + | chr8_3:6045187-6045206 | Msa1272440:intron | 45.0% | |
| ATCTGCTGTCTTGCAGTACA+GGG | + | chr8_3:6045188-6045207 | Msa1272440:intron | 45.0% | |
| TGTCTTGCAGTACAGGGAAA+TGG | + | chr8_3:6045194-6045213 | Msa1272440:intron | 45.0% | |
| GTCTTGCAGTACAGGGAAAT+GGG | + | chr8_3:6045195-6045214 | Msa1272440:intron | 45.0% | |
| GGCTTCCTCACAATATCAGA+AGG | + | chr8_3:6045875-6045894 | Msa1272440:CDS | 45.0% | |
| ! | GCCAACTTTCTACTTGTTGC+TGG | + | chr8_3:6046322-6046341 | Msa1272440:intron | 45.0% |
| GCCAGCAACAAGTAGAAAGT+TGG | - | chr8_3:6046326-6046345 | None:intergenic | 45.0% | |
| AAGAAGCTGGCACAAAACTC+AGG | - | chr8_3:6046385-6046404 | None:intergenic | 45.0% | |
| !! | TGAGTTTTGTGCCAGCTTCT+TGG | + | chr8_3:6046384-6046403 | Msa1272440:CDS | 45.0% |
| CCAAGCTGGCTGGAAAAATT+GGG | + | chr8_3:6046450-6046469 | Msa1272440:CDS | 45.0% | |
| GGCTGGAAAAATTGGGTCAA+AGG | + | chr8_3:6046457-6046476 | Msa1272440:CDS | 45.0% | |
| AATGACATGCACAGGCAATC+AGG | - | chr8_3:6046668-6046687 | None:intergenic | 45.0% | |
| ! | ATCTGGTCCATGGAGTTTTC+CGG | - | chr8_3:6046820-6046839 | None:intergenic | 45.0% |
| ACTCCATGGACCAGATATTG+GGG | + | chr8_3:6046824-6046843 | Msa1272440:CDS | 45.0% | |
| CTTTATCAAGCTGGGACTAC+TGG | + | chr8_3:6046861-6046880 | Msa1272440:CDS | 45.0% | |
| !!! | TTAATATATATTTTCAATTT+TGG | + | chr8_3:6042886-6042905 | Msa1272440:intron | 5.0% |
| !!! | TAATATATATTTTCAATTTT+GGG | + | chr8_3:6042887-6042906 | Msa1272440:intron | 5.0% |
| !! | ATACATTATTATTTATTTAT+TGG | - | chr8_3:6045743-6045762 | None:intergenic | 5.0% |
| CTGTTCCGAAAGCTGAGACA+AGG | + | chr8_3:6041543-6041562 | Msa1272440:five_prime_UTR | 50.0% | |
| ! | CGTTGAGTAACGGAAGTCCA+TGG | + | chr8_3:6041583-6041602 | Msa1272440:CDS | 50.0% |
| ! | GGAGTAGCAAGCTTTGTCCA+TGG | - | chr8_3:6041603-6041622 | None:intergenic | 50.0% |
| AGGAGCGAAACGAACACGAA+CGG | - | chr8_3:6041736-6041755 | None:intergenic | 50.0% | |
| TTCTGGCACCACCAACATGA+AGG | - | chr8_3:6041773-6041792 | None:intergenic | 50.0% | |
| !! | CTTGGCCTTGATTGGGATGA+AGG | + | chr8_3:6042367-6042386 | Msa1272440:CDS | 50.0% |
| ACCATAATCTCCACCAACGC+CGG | - | chr8_3:6042491-6042510 | None:intergenic | 50.0% | |
| TGTTTGGGAGTTTGAAGGGG+AGG | + | chr8_3:6042785-6042804 | Msa1272440:intron | 50.0% | |
| GTTTGGGAGTTTGAAGGGGA+GGG | + | chr8_3:6042786-6042805 | Msa1272440:intron | 50.0% | |
| TTTGGGAGTTTGAAGGGGAG+GGG | + | chr8_3:6042787-6042806 | Msa1272440:intron | 50.0% | |
| ATGGGCCAATGCAACAGATG+CGG | + | chr8_3:6043835-6043854 | Msa1272440:CDS | 50.0% | |
| TGCGGAAGTAGAAGAAGAGC+TGG | + | chr8_3:6043853-6043872 | Msa1272440:CDS | 50.0% | |
| ! | TTCCTTTGGGGACACGAAAC+CGG | - | chr8_3:6043901-6043920 | None:intergenic | 50.0% |
| CCACTGTTTCGAAGGGATCA+TGG | - | chr8_3:6044145-6044164 | None:intergenic | 50.0% | |
| CCATGATCCCTTCGAAACAG+TGG | + | chr8_3:6044142-6044161 | Msa1272440:intron | 50.0% | |
| !! | GACGGTTGATGATGCTACCA+TGG | + | chr8_3:6044357-6044376 | Msa1272440:CDS | 50.0% |
| CGACATGGAGCAACATCAGT+TGG | + | chr8_3:6044702-6044721 | Msa1272440:CDS | 50.0% | |
| TGGAGCAACATCAGTTGGTC+AGG | + | chr8_3:6044707-6044726 | Msa1272440:CDS | 50.0% | |
| ATCGAACCTGAGACCTTGAG+AGG | - | chr8_3:6045048-6045067 | None:intergenic | 50.0% | |
| GTCTCAGGTTCGATTCTTCC+CGG | + | chr8_3:6045054-6045073 | Msa1272440:intron | 50.0% | |
| GGAAATGGGATACCTACCTG+AGG | + | chr8_3:6045209-6045228 | Msa1272440:CDS | 50.0% | |
| CATTATTAGGCTGGGGCGAT+GGG | + | chr8_3:6045250-6045269 | Msa1272440:CDS | 50.0% | |
| AGTTTGGTCATCTCCTCGGA+TGG | - | chr8_3:6045830-6045849 | None:intergenic | 50.0% | |
| CCAACGCTCTCCGATAAGTT+TGG | - | chr8_3:6045846-6045865 | None:intergenic | 50.0% | |
| ! | CCAAACTTATCGGAGAGCGT+TGG | + | chr8_3:6045843-6045862 | Msa1272440:CDS | 50.0% |
| AGGGCCCTTCTGATATTGTG+AGG | - | chr8_3:6045883-6045902 | None:intergenic | 50.0% | |
| CAGTGATCTTGTAGGTGCAC+TGG | + | chr8_3:6046420-6046439 | Msa1272440:CDS | 50.0% | |
| CTTGTAGGTGCACTGGAAGA+AGG | + | chr8_3:6046427-6046446 | Msa1272440:CDS | 50.0% | |
| GCCAAGCTGGCTGGAAAAAT+TGG | + | chr8_3:6046449-6046468 | Msa1272440:CDS | 50.0% | |
| ! | CCCAATTTTTCCAGCCAGCT+TGG | - | chr8_3:6046453-6046472 | None:intergenic | 50.0% |
| CGGCAAATCAACTAAGCGCA+AGG | + | chr8_3:6046483-6046502 | Msa1272440:CDS | 50.0% | |
| TAAGCGCAAGGTGAGCTGAA+TGG | + | chr8_3:6046495-6046514 | Msa1272440:intron | 50.0% | |
| AAGCGCAAGGTGAGCTGAAT+GGG | + | chr8_3:6046496-6046515 | Msa1272440:intron | 50.0% | |
| ! | CATGGAGTTTTCCGGTCAGT+AGG | - | chr8_3:6046812-6046831 | None:intergenic | 50.0% |
| CTACTGACCGGAAAACTCCA+TGG | + | chr8_3:6046810-6046829 | Msa1272440:CDS | 50.0% | |
| ACAACAGCAGCCCCAATATC+TGG | - | chr8_3:6046837-6046856 | None:intergenic | 50.0% | |
| GGAGCGAAACGAACACGAAC+GGG | - | chr8_3:6041735-6041754 | None:intergenic | 55.0% | |
| CGTTTCGCTCCTTCTCCTAC+TGG | + | chr8_3:6041744-6041763 | Msa1272440:CDS | 55.0% | |
| CCATAATCTCCACCAACGCC+GGG | - | chr8_3:6042490-6042509 | None:intergenic | 55.0% | |
| !!! | GGAGGGTTTTAGGAGGGCTT+TGG | - | chr8_3:6043037-6043056 | None:intergenic | 55.0% |
| TTCCGGTTTCGTGTCCCCAA+AGG | + | chr8_3:6043896-6043915 | Msa1272440:CDS | 55.0% | |
| !! | TGGTGTTGGCTTGGGACCTT+GGG | + | chr8_3:6045015-6045034 | Msa1272440:intron | 55.0% |
| TGTGCTCCTCTCAAGGTCTC+AGG | + | chr8_3:6045039-6045058 | Msa1272440:intron | 55.0% | |
| CGCCCCAGCCTAATAATGCT+AGG | - | chr8_3:6045248-6045267 | None:intergenic | 55.0% | |
| GCATTATTAGGCTGGGGCGA+TGG | + | chr8_3:6045249-6045268 | Msa1272440:CDS | 55.0% | |
| TTTACGAGCACGTCCATCCG+AGG | + | chr8_3:6045814-6045833 | Msa1272440:CDS | 55.0% | |
| !! | GGAGAGCGTTGGAAGACATC+TGG | + | chr8_3:6045854-6045873 | Msa1272440:CDS | 55.0% |
| CAGCCCCAATATCTGGTCCA+TGG | - | chr8_3:6046830-6046849 | None:intergenic | 55.0% | |
| TGATTGTTAGGGCCCGGCGT+TGG | + | chr8_3:6042475-6042494 | Msa1272440:intron | 60.0% | |
| !! | CCCGGCGTTGGTGGAGATTA+TGG | + | chr8_3:6042487-6042506 | Msa1272440:CDS | 60.0% |
| GGAGTTTGAAGGGGAGGGGA+GGG | + | chr8_3:6042791-6042810 | Msa1272440:intron | 60.0% | |
| GAGTTTGAAGGGGAGGGGAG+GGG | + | chr8_3:6042792-6042811 | Msa1272440:intron | 60.0% | |
| !! | TGACACCACTTGGGTTGGCC+TGG | + | chr8_3:6044992-6045011 | Msa1272440:intron | 60.0% |
| !! | TTGGGTTGGCCTGGTGGTGT+TGG | + | chr8_3:6045001-6045020 | Msa1272440:intron | 60.0% |
| !! | TTGGCCTGGTGGTGTTGGCT+TGG | + | chr8_3:6045006-6045025 | Msa1272440:intron | 60.0% |
| !! | TGGCCTGGTGGTGTTGGCTT+GGG | + | chr8_3:6045007-6045026 | Msa1272440:intron | 60.0% |
| !! | GTGGTGTTGGCTTGGGACCT+TGG | + | chr8_3:6045014-6045033 | Msa1272440:intron | 60.0% |
| !! | GGTGTTGGCTTGGGACCTTG+GGG | + | chr8_3:6045016-6045035 | Msa1272440:intron | 60.0% |
| ! | CTTGAGAGGAGCACACCCCA+AGG | - | chr8_3:6045034-6045053 | None:intergenic | 60.0% |
| CTTGGGGTGTGCTCCTCTCA+AGG | + | chr8_3:6045032-6045051 | Msa1272440:intron | 60.0% | |
| GCACTGGAAGAAGGCCAAGC+TGG | + | chr8_3:6046436-6046455 | Msa1272440:CDS | 60.0% | |
| TGGAAGAAGGCCAAGCTGGC+TGG | + | chr8_3:6046440-6046459 | Msa1272440:CDS | 60.0% | |
| CCACTTCGGCTCCTACTGAC+CGG | + | chr8_3:6046798-6046817 | Msa1272440:CDS | 60.0% | |
| ! | TTGTTAGGGCCCGGCGTTGG+TGG | + | chr8_3:6042478-6042497 | Msa1272440:intron | 65.0% |
| GGGAGTTTGAAGGGGAGGGG+AGG | + | chr8_3:6042790-6042809 | Msa1272440:intron | 65.0% | |
| TTTGAAGGGGAGGGGAGGGG+AGG | + | chr8_3:6042795-6042814 | Msa1272440:intron | 65.0% | |
| AGGCAGCCCAAACAGGCCCT+AGG | - | chr8_3:6043159-6043178 | None:intergenic | 65.0% | |
| !! | CACCACTTGGGTTGGCCTGG+TGG | + | chr8_3:6044995-6045014 | Msa1272440:intron | 65.0% |
| CACCACCAGGCCAACCCAAG+TGG | - | chr8_3:6045000-6045019 | None:intergenic | 65.0% | |
| GGTCCCAAGCCAACACCACC+AGG | - | chr8_3:6045013-6045032 | None:intergenic | 65.0% | |
| CCGGTCAGTAGGAGCCGAAG+TGG | - | chr8_3:6046801-6046820 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 6041409 | 6047306 | 6041409 | ID=Msa1272440;Name=Msa1272440 |
| chr8_3 | mRNA | 6041409 | 6047306 | 6041409 | ID=Msa1272440-mRNA-1;Parent=Msa1272440;Name=Msa1272440-mRNA-1;_AED=0.09;_eAED=0.09;_QI=161|1|1|1|1|1|13|302|568 |
| chr8_3 | exon | 6041409 | 6041820 | 6041409 | ID=Msa1272440-mRNA-1:exon:2170;Parent=Msa1272440-mRNA-1 |
| chr8_3 | exon | 6042270 | 6042388 | 6042270 | ID=Msa1272440-mRNA-1:exon:2171;Parent=Msa1272440-mRNA-1 |
| chr8_3 | exon | 6042485 | 6042606 | 6042485 | ID=Msa1272440-mRNA-1:exon:2172;Parent=Msa1272440-mRNA-1 |
| chr8_3 | exon | 6043773 | 6043952 | 6043773 | ID=Msa1272440-mRNA-1:exon:2173;Parent=Msa1272440-mRNA-1 |
| chr8_3 | exon | 6044280 | 6044398 | 6044280 | ID=Msa1272440-mRNA-1:exon:2174;Parent=Msa1272440-mRNA-1 |
| chr8_3 | exon | 6044486 | 6044534 | 6044486 | ID=Msa1272440-mRNA-1:exon:2175;Parent=Msa1272440-mRNA-1 |
| chr8_3 | exon | 6044627 | 6044728 | 6044627 | ID=Msa1272440-mRNA-1:exon:2176;Parent=Msa1272440-mRNA-1 |
| chr8_3 | exon | 6045204 | 6045306 | 6045204 | ID=Msa1272440-mRNA-1:exon:2177;Parent=Msa1272440-mRNA-1 |
| chr8_3 | exon | 6045406 | 6045469 | 6045406 | ID=Msa1272440-mRNA-1:exon:2178;Parent=Msa1272440-mRNA-1 |
| chr8_3 | exon | 6045796 | 6045910 | 6045796 | ID=Msa1272440-mRNA-1:exon:2179;Parent=Msa1272440-mRNA-1 |
| chr8_3 | exon | 6046063 | 6046163 | 6046063 | ID=Msa1272440-mRNA-1:exon:2180;Parent=Msa1272440-mRNA-1 |
| chr8_3 | exon | 6046348 | 6046504 | 6046348 | ID=Msa1272440-mRNA-1:exon:2181;Parent=Msa1272440-mRNA-1 |
| chr8_3 | exon | 6046780 | 6047306 | 6046780 | ID=Msa1272440-mRNA-1:exon:2182;Parent=Msa1272440-mRNA-1 |
| chr8_3 | five_prime_UTR | 6041409 | 6041569 | 6041409 | ID=Msa1272440-mRNA-1:five_prime_utr;Parent=Msa1272440-mRNA-1 |
| chr8_3 | CDS | 6041570 | 6041820 | 6041570 | ID=Msa1272440-mRNA-1:cds;Parent=Msa1272440-mRNA-1 |
| chr8_3 | CDS | 6042270 | 6042388 | 6042270 | ID=Msa1272440-mRNA-1:cds;Parent=Msa1272440-mRNA-1 |
| chr8_3 | CDS | 6042485 | 6042606 | 6042485 | ID=Msa1272440-mRNA-1:cds;Parent=Msa1272440-mRNA-1 |
| chr8_3 | CDS | 6043773 | 6043952 | 6043773 | ID=Msa1272440-mRNA-1:cds;Parent=Msa1272440-mRNA-1 |
| chr8_3 | CDS | 6044280 | 6044398 | 6044280 | ID=Msa1272440-mRNA-1:cds;Parent=Msa1272440-mRNA-1 |
| chr8_3 | CDS | 6044486 | 6044534 | 6044486 | ID=Msa1272440-mRNA-1:cds;Parent=Msa1272440-mRNA-1 |
| chr8_3 | CDS | 6044627 | 6044728 | 6044627 | ID=Msa1272440-mRNA-1:cds;Parent=Msa1272440-mRNA-1 |
| chr8_3 | CDS | 6045204 | 6045306 | 6045204 | ID=Msa1272440-mRNA-1:cds;Parent=Msa1272440-mRNA-1 |
| chr8_3 | CDS | 6045406 | 6045469 | 6045406 | ID=Msa1272440-mRNA-1:cds;Parent=Msa1272440-mRNA-1 |
| chr8_3 | CDS | 6045796 | 6045910 | 6045796 | ID=Msa1272440-mRNA-1:cds;Parent=Msa1272440-mRNA-1 |
| chr8_3 | CDS | 6046063 | 6046163 | 6046063 | ID=Msa1272440-mRNA-1:cds;Parent=Msa1272440-mRNA-1 |
| chr8_3 | CDS | 6046348 | 6046504 | 6046348 | ID=Msa1272440-mRNA-1:cds;Parent=Msa1272440-mRNA-1 |
| chr8_3 | CDS | 6046780 | 6047004 | 6046780 | ID=Msa1272440-mRNA-1:cds;Parent=Msa1272440-mRNA-1 |
| chr8_3 | three_prime_UTR | 6047005 | 6047306 | 6047005 | ID=Msa1272440-mRNA-1:three_prime_utr;Parent=Msa1272440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
