AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1280130


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1280130 MtrunA17_Chr8g0350181 94.453 667 30 1 1 667 1 660 0.0 1258
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1280130 AT2G31890.1 67.138 566 185 1 86 650 102 667 0.0 732

Find 161 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCCATGTTCTCGTGGTAAC+TGG 0.232331 8_3:-18197241 None:intergenic
ATAGAAGATTTACTTGATTA+TGG 0.247712 8_3:+18197670 Msa1280130:CDS
GGAAGGTTTATTGAATTCTT+TGG 0.259405 8_3:+18197162 Msa1280130:CDS
AAGAACAAACAAGTGATTTC+TGG 0.261597 8_3:-18196742 None:intergenic
ACCGTCTCTTCTCTCCTTCT+TGG 0.275349 8_3:+18196797 Msa1280130:five_prime_UTR
CTATGCTGTCTTTGGCAAAA+TGG 0.291391 8_3:+18198572 Msa1280130:CDS
TTGAGGAGAATTGAACATTA+TGG 0.308811 8_3:+18197141 Msa1280130:exon
AGATATCATGTTTGCTTCTC+AGG 0.310999 8_3:+18198671 Msa1280130:CDS
CTTCTCAAATCACTTTCCTT+TGG 0.312687 8_3:-18197721 None:intergenic
GGCTTATGCGATGGAAGATT+TGG 0.313416 8_3:+18197564 Msa1280130:CDS
TCATCGCATTGCTAAGAATA+TGG 0.316718 8_3:+18197990 Msa1280130:CDS
AAACCCTTTGCTCCTCAAAA+TGG 0.319665 8_3:-18198632 None:intergenic
GCTTGGTCCTATGCTGTCTT+TGG 0.328877 8_3:+18198564 Msa1280130:CDS
ATCAGAGTTTGTCGGGGAAT+TGG 0.338938 8_3:+18197408 Msa1280130:CDS
TATGGTTCAGAGGAAGAGTT+TGG 0.340010 8_3:+18197688 Msa1280130:CDS
AAGCAGTTCGCCTCCAACTT+TGG 0.340524 8_3:-18198148 None:intergenic
GTCAAAGAATATGTTGTAGA+TGG 0.342480 8_3:+18198870 Msa1280130:CDS
GAAGTTTCTTCTCTTATGTA+TGG 0.347428 8_3:+18198598 Msa1280130:CDS
CAAAGTTGTTTAAAACCATT+TGG 0.347921 8_3:+18197190 Msa1280130:CDS
GACGTTTCTTAATGATAGTA+TGG 0.351740 8_3:-18200077 None:intergenic
CAAAACATTGCTAACATTGC+AGG 0.362272 8_3:+18198234 Msa1280130:CDS
AATAGACTGTCTCAATTCTC+TGG 0.368929 8_3:+18197811 Msa1280130:CDS
GACAGTTCTGCGAAAAGATC+GGG 0.375759 8_3:-18198285 None:intergenic
TAAGGGAGAGGAGTCTGATA+TGG 0.376741 8_3:+18197378 Msa1280130:CDS
TTGTTAGCACTGGACTTGAA+TGG 0.376921 8_3:+18198847 Msa1280130:CDS
TTGAATCTGTTGATCGAAAC+GGG 0.378529 8_3:+18198496 Msa1280130:CDS
ATTCCTTGAGCGGAGCATTC+AGG 0.388904 8_3:-18198102 None:intergenic
ACACATTTCTCTAGAAATAC+TGG 0.398436 8_3:+18198951 Msa1280130:CDS
TTGTGAAACACAAACTTGTT+TGG 0.406484 8_3:+18197104 Msa1280130:five_prime_UTR
CGACAGTTCTGCGAAAAGAT+CGG 0.410899 8_3:-18198286 None:intergenic
TTGAGAGCTGACCTCTTGAT+AGG 0.415647 8_3:-18199417 None:intergenic
GAAATTGCACTGACTAAAGT+TGG 0.415751 8_3:+18198198 Msa1280130:CDS
GGGAAATTATAACTAACTCT+TGG 0.416010 8_3:-18197220 None:intergenic
ACAATTGTCGCGGTTGCAAA+AGG 0.421350 8_3:+18197922 Msa1280130:CDS
AGGAGATAGATTGGCTGCAT+TGG 0.425081 8_3:+18197345 Msa1280130:CDS
AGTCGATAAGAAGCTTGCTT+TGG 0.428233 8_3:+18198914 Msa1280130:CDS
AACTTCGTCGTTTCAGAAAG+AGG 0.432282 8_3:+18198812 Msa1280130:CDS
GTTACCGAGCTCCGAAGAAA+AGG 0.432697 8_3:+18197440 Msa1280130:CDS
GAGAGAAGAGACGGTTCCTC+AGG 0.434520 8_3:-18196789 None:intergenic
GAAATAATTCACACTTTCAA+AGG 0.434691 8_3:+18198321 Msa1280130:CDS
ACTCTTGGATTGAAACCAAA+TGG 0.436081 8_3:-18197205 None:intergenic
GGTCATCTTCTTGTTAGCAC+TGG 0.437852 8_3:+18198837 Msa1280130:CDS
CAACTTTACTTACTTTAAGT+AGG 0.439908 8_3:+18198523 Msa1280130:CDS
CTGCAGTGGGAGGAACTTCA+AGG 0.440694 8_3:+18199843 Msa1280130:intron
ATTGGGAATCAGAGTTTGTC+GGG 0.442092 8_3:+18197401 Msa1280130:CDS
GTCGGGGAATTGGATCCGTT+TGG 0.444529 8_3:+18197418 Msa1280130:CDS
GAGAGGAGTCTGATATGGAT+TGG 0.446753 8_3:+18197383 Msa1280130:CDS
CGCCAATCAAAAGGTTTCAT+AGG 0.449991 8_3:+18198438 Msa1280130:CDS
AAGGAATCTCAAACATAGCT+TGG 0.457912 8_3:+18198118 Msa1280130:CDS
TCAAGCACTGGTTTACAAGA+TGG 0.458479 8_3:-18198695 None:intergenic
AAAGAGATGTCTATGCTTGT+CGG 0.459089 8_3:+18198060 Msa1280130:CDS
AGAGGAGTCTGATATGGATT+GGG 0.459101 8_3:+18197384 Msa1280130:CDS
TGCATTGGATGGTGATGATA+AGG 0.459731 8_3:+18197360 Msa1280130:CDS
AAATTGCACTGACTAAAGTT+GGG 0.459908 8_3:+18198199 Msa1280130:CDS
TGAAATGTTTGCAGAAAATA+CGG 0.460460 8_3:+18197765 Msa1280130:CDS
TGTTAGCACTGGACTTGAAT+GGG 0.465246 8_3:+18198848 Msa1280130:CDS
TTTCGCAGAACTGTCGAAAA+GGG 0.467366 8_3:+18198293 Msa1280130:CDS
GGAATTCAAGTTTCAAGCAC+TGG 0.470390 8_3:-18198707 None:intergenic
AAATCACTTTCCTTTGGCTG+TGG 0.472714 8_3:-18197715 None:intergenic
TGGTTGATTTGTATTCTTTG+AGG 0.475884 8_3:+18197124 Msa1280130:five_prime_UTR
CTGAACAGGTGGAGTACCTA+AGG 0.484246 8_3:+18199871 Msa1280130:CDS
AACTTTACTTACTTTAAGTA+GGG 0.486274 8_3:+18198524 Msa1280130:CDS
GAAGATCATCGCCAATCAAA+AGG 0.487483 8_3:+18198429 Msa1280130:CDS
AAAGGGTTTCAGAGCTGTAT+CGG 0.491181 8_3:+18198646 Msa1280130:CDS
ACTTCAAGGAGGGTCTGAAC+AGG 0.493250 8_3:+18199857 Msa1280130:CDS
GTCTCTATGCGGTGAGCTTG+AGG 0.498153 8_3:+18198743 Msa1280130:CDS
CTTTAAGTAGGGATCAGCTT+GGG 0.498261 8_3:+18198535 Msa1280130:CDS
GCTTAAACGTCGATACATTA+CGG 0.499114 8_3:+18199367 Msa1280130:CDS
AAAGAAGGTTGAGGAGAAGG+TGG 0.499984 8_3:+18197612 Msa1280130:CDS
ATCAGCTTGGGACGATAGCT+TGG 0.502141 8_3:+18198547 Msa1280130:CDS
TTGCAGAAAATACGGAGAAA+AGG 0.502813 8_3:+18197773 Msa1280130:CDS
TTACCGAGCTCCGAAGAAAA+GGG 0.506725 8_3:+18197441 Msa1280130:CDS
AGGAATCTCAAACATAGCTT+GGG 0.508858 8_3:+18198119 Msa1280130:CDS
GATAGTAAAGCCGGTGCTAG+AGG 0.509673 8_3:+18197325 Msa1280130:CDS
TATGATGAAAACTCGAAGAC+TGG 0.509881 8_3:+18198023 Msa1280130:CDS
AAGAAAAGAAACAAAACAGT+TGG 0.510323 8_3:-18200317 None:intergenic
GCTTGGGCACTGTCCAAAGT+TGG 0.513760 8_3:+18198135 Msa1280130:CDS
AAATAATTCACACTTTCAAA+GGG 0.517159 8_3:+18198322 Msa1280130:CDS
TTAAGCATGGTATGTCCTAA+AGG 0.524947 8_3:-18199350 None:intergenic
TTTGATAAAGATAGTAAAGC+CGG 0.527743 8_3:+18197316 Msa1280130:CDS
TTGGTGTGTGAGGGCGAGAG+AGG 0.528486 8_3:+18197510 Msa1280130:CDS
GCCATGTTCTCGTGGTAACT+GGG 0.528611 8_3:-18197240 None:intergenic
CGTCGATACATTACGGCTGC+CGG 0.529125 8_3:+18199374 Msa1280130:CDS
TTGCCTGAATGCTCCGCTCA+AGG 0.529798 8_3:+18198099 Msa1280130:CDS
TTCGGAGCTCGGTAACCAAA+CGG 0.529938 8_3:-18197433 None:intergenic
GTTGAATCTGTTGATCGAAA+CGG 0.530436 8_3:+18198495 Msa1280130:CDS
CAACGATACGAGTTTCCAAC+CGG 0.531834 8_3:-18199393 None:intergenic
AAGGGTTTCAGAGCTGTATC+GGG 0.534817 8_3:+18198647 Msa1280130:CDS
GAGGATAAAGTTTCCAGCGC+TGG 0.535251 8_3:+18198762 Msa1280130:CDS
GAATCAAATACAGTGTCAGC+AGG 0.536610 8_3:-18198390 None:intergenic
CGGTGCTAGAGGAGATAGAT+TGG 0.539783 8_3:+18197336 Msa1280130:CDS
GTTTGGACTGCCACAGCCAA+AGG 0.542148 8_3:+18197705 Msa1280130:CDS
GATTGGGAATCAGAGTTTGT+CGG 0.543250 8_3:+18197400 Msa1280130:CDS
AGCCTTGTATATTTGTTAGA+CGG 0.543545 8_3:+18200033 Msa1280130:three_prime_UTR
AATCGATTAAAGCGAAGGGT+AGG 0.547508 8_3:+18197542 Msa1280130:CDS
ATAGACTGTCTCAATTCTCT+GGG 0.548337 8_3:+18197812 Msa1280130:CDS
TCGTCGTTTCAGAAAGAGGT+TGG 0.549276 8_3:+18198816 Msa1280130:CDS
TTCAAAGGTGAGAGAGGTGA+GGG 0.550987 8_3:-18197952 None:intergenic
TTCCGTCTAACAAATATACA+AGG 0.558352 8_3:-18200035 None:intergenic
CATAGAGACAACTGAAGATG+TGG 0.559818 8_3:-18198729 None:intergenic
CAATCTATCTCCTCTAGCAC+CGG 0.560589 8_3:-18197335 None:intergenic
TCAAAGAATATGTTGTAGAT+GGG 0.560728 8_3:+18198871 Msa1280130:CDS
ATTTAAACGCCATGTTCTCG+TGG 0.561503 8_3:-18197248 None:intergenic
GGATGGTGATGATAAGGGAG+AGG 0.562547 8_3:+18197366 Msa1280130:CDS
TATGTTTGAGATTCCTTGAG+CGG 0.564325 8_3:-18198112 None:intergenic
GCATTGGATGGTGATGATAA+GGG 0.566131 8_3:+18197361 Msa1280130:CDS
GCTTGAGGATACCGATGGAA+TGG 0.566585 8_3:+18197486 Msa1280130:CDS
GAATATGAAACTCACCAAGA+AGG 0.566627 8_3:-18196811 None:intergenic
TGGGCACTGTCCAAAGTTGG+AGG 0.570540 8_3:+18198138 Msa1280130:CDS
ATCGATTAAAGCGAAGGGTA+GGG 0.575049 8_3:+18197543 Msa1280130:CDS
TTTACTTGATTATGGTTCAG+AGG 0.575949 8_3:+18197678 Msa1280130:CDS
GATAGATTGGCTGCATTGGA+TGG 0.577186 8_3:+18197349 Msa1280130:CDS
GCAATATTCAAAGGTGAGAG+AGG 0.578150 8_3:-18197958 None:intergenic
GGAGAATTGAACATTATGGA+AGG 0.580513 8_3:+18197145 Msa1280130:exon
CAAAGGAAAGTGATTTGAGA+AGG 0.581889 8_3:+18197722 Msa1280130:CDS
GATACATTACGGCTGCCGGT+TGG 0.588016 8_3:+18199378 Msa1280130:CDS
TCTTATGTATGGAAAACTCT+CGG 0.591047 8_3:+18198609 Msa1280130:CDS
ATTGAAATCGATTAAAGCGA+AGG 0.591251 8_3:+18197537 Msa1280130:CDS
ACCAAGAAGGAGAGAAGAGA+CGG 0.591258 8_3:-18196798 None:intergenic
TCAAGGAGGGTCTGAACAGG+TGG 0.593274 8_3:+18199860 Msa1280130:CDS
TCCCAGTTACCACGAGAACA+TGG 0.596502 8_3:+18197239 Msa1280130:CDS
AAGCTTGCTTTGGAGATCGA+TGG 0.599041 8_3:+18198924 Msa1280130:CDS
AGTTTGTCGACTAGCTCAGA+TGG 0.599595 8_3:-18200117 None:intergenic
TGTTGTAGATGGGTACACTT+TGG 0.603253 8_3:+18198881 Msa1280130:CDS
ACTTTAAGTAGGGATCAGCT+TGG 0.603823 8_3:+18198534 Msa1280130:CDS
CGTATCGTTGTCCTATCAAG+AGG 0.604008 8_3:+18199406 Msa1280130:CDS
AGAAAATACGGAGAAAAGGA+TGG 0.607622 8_3:+18197777 Msa1280130:CDS
ACACAGTCTGCTTTGTCCTG+AGG 0.609180 8_3:+18196773 Msa1280130:five_prime_UTR
GCAAAAGTCAAAGTTGCTTG+AGG 0.609630 8_3:+18197471 Msa1280130:CDS
AATTGCACTGACTAAAGTTG+GGG 0.609675 8_3:+18198200 Msa1280130:CDS
GAAGGGTAGGGCTTATGCGA+TGG 0.611487 8_3:+18197555 Msa1280130:CDS
CAGACATTCATGCATACACA+AGG 0.612231 8_3:+18200364 Msa1280130:three_prime_UTR
TTGAGCGGAGCATTCAGGCA+AGG 0.617913 8_3:-18198097 None:intergenic
GCAGACTGCAGATGATGTGT+TGG 0.621746 8_3:+18197885 Msa1280130:CDS
AGGATACCGATGGAATGGAT+TGG 0.626596 8_3:+18197491 Msa1280130:CDS
CACACACCAATCCATTCCAT+CGG 0.628347 8_3:-18197497 None:intergenic
TACCGAGCTCCGAAGAAAAG+GGG 0.632812 8_3:+18197442 Msa1280130:CDS
TTGAAATCGATTAAAGCGAA+GGG 0.635470 8_3:+18197538 Msa1280130:CDS
ATGGAATGGATTGGTGTGTG+AGG 0.635612 8_3:+18197500 Msa1280130:CDS
AGAGCAGTAGCAATATTCAA+AGG 0.641153 8_3:-18197967 None:intergenic
TGGAATGGATTGGTGTGTGA+GGG 0.643530 8_3:+18197501 Msa1280130:CDS
GTGTATGCATGAATGTCTGA+TGG 0.644381 8_3:-18200360 None:intergenic
GTGTGTGAGGGCGAGAGAGG+TGG 0.645809 8_3:+18197513 Msa1280130:CDS
TGAACAGGTGGAGTACCTAA+GGG 0.653442 8_3:+18199872 Msa1280130:CDS
AATGTATCGACGTTTAAGCA+TGG 0.653806 8_3:-18199363 None:intergenic
TACGTACGAAACAATTGTCG+CGG 0.656108 8_3:+18197912 Msa1280130:CDS
ATTCAAAGGTGAGAGAGGTG+AGG 0.658929 8_3:-18197953 None:intergenic
AGTGGGAGGAACTTCAAGGA+GGG 0.659979 8_3:+18199847 Msa1280130:intron
ATAGAGACAACTGAAGATGT+GGG 0.662526 8_3:-18198728 None:intergenic
GTATTTCTAGAGAAATGTGT+AGG 0.665375 8_3:-18198948 None:intergenic
TTGGGAATCAGAGTTTGTCG+GGG 0.682626 8_3:+18197402 Msa1280130:CDS
AAGGCAAGTGAGTTTGATTG+CGG 0.684765 8_3:+18197741 Msa1280130:CDS
AAGAAACGTCAATAACCTCA+CGG 0.688566 8_3:+18200090 Msa1280130:three_prime_UTR
CATCTTCAGTTGTCTCTATG+CGG 0.688711 8_3:+18198732 Msa1280130:CDS
AAGTTGCTTGAGGATACCGA+TGG 0.691201 8_3:+18197481 Msa1280130:CDS
CAGTGGGAGGAACTTCAAGG+AGG 0.704463 8_3:+18199846 Msa1280130:intron
TGATAACACTACATTGACAG+AGG 0.716733 8_3:+18199926 Msa1280130:CDS
TCAAAGGTGAGAGAGGTGAG+GGG 0.721265 8_3:-18197951 None:intergenic
TGAATCTGTTGATCGAAACG+GGG 0.721909 8_3:+18198497 Msa1280130:CDS
AGACATTCATGCATACACAA+GGG 0.745983 8_3:+18200365 Msa1280130:three_prime_UTR
AAACGTCAATAACCTCACGG+TGG 0.776539 8_3:+18200093 Msa1280130:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAATGAAAAAAATGACA+GGG - chr8_3:18199482-18199501 None:intergenic 15.0%
!!! ATTTTAATGAAAAAAATGAC+AGG - chr8_3:18199483-18199502 None:intergenic 15.0%
!! ACAAAAATATGAATAATAAC+AGG - chr8_3:18199651-18199670 None:intergenic 15.0%
!!! AAAATCAAAAAAGGATTTTA+GGG - chr8_3:18200200-18200219 None:intergenic 15.0%
!! ATAGAAGATTTACTTGATTA+TGG + chr8_3:18197670-18197689 Msa1280130:CDS 20.0%
!! AAATAATTCACACTTTCAAA+GGG + chr8_3:18198322-18198341 Msa1280130:CDS 20.0%
!! AACTTTACTTACTTTAAGTA+GGG + chr8_3:18198524-18198543 Msa1280130:CDS 20.0%
!!! TAAAGTCATTGTTTTCATAT+GGG - chr8_3:18199167-18199186 None:intergenic 20.0%
!!! ATAAAGTCATTGTTTTCATA+TGG - chr8_3:18199168-18199187 None:intergenic 20.0%
!!! ATTAAGTTGTTTATCCAAAA+AGG + chr8_3:18199229-18199248 Msa1280130:intron 20.0%
!!! TTAAGTTGTTTATCCAAAAA+GGG + chr8_3:18199230-18199249 Msa1280130:intron 20.0%
!! AATTGATACAAGAGAAAATA+AGG - chr8_3:18199265-18199284 None:intergenic 20.0%
!! ACACATAAAATCAATATATG+TGG - chr8_3:18199542-18199561 None:intergenic 20.0%
!!! TATTGATTTTATGTGTGTTT+TGG + chr8_3:18199546-18199565 Msa1280130:intron 20.0%
!!! ATAAAGTACTAGAAATAGTT+TGG - chr8_3:18199767-18199786 None:intergenic 20.0%
!!! AACTATTTCTAGTACTTTAT+AGG + chr8_3:18199767-18199786 Msa1280130:intron 20.0%
!!! AAATCAAAAAAGGATTTTAG+GGG - chr8_3:18200199-18200218 None:intergenic 20.0%
!!! CAAAATCAAAAAAGGATTTT+AGG - chr8_3:18200201-18200220 None:intergenic 20.0%
!!! TTGTTTCTTTTCTTTTCATA+AGG + chr8_3:18200326-18200345 Msa1280130:three_prime_UTR 20.0%
! GAACTAATTTGAGAGATAAA+GGG - chr8_3:18196845-18196864 None:intergenic 25.0%
! TGAACTAATTTGAGAGATAA+AGG - chr8_3:18196846-18196865 None:intergenic 25.0%
! GCTAAAATTCAGAAATAATG+AGG - chr8_3:18196976-18196995 None:intergenic 25.0%
!! TTTTATCAGTAACCACAAAA+GGG - chr8_3:18197064-18197083 None:intergenic 25.0%
!! TTTTTATCAGTAACCACAAA+AGG - chr8_3:18197065-18197084 None:intergenic 25.0%
!! CAAAGTTGTTTAAAACCATT+TGG + chr8_3:18197190-18197209 Msa1280130:CDS 25.0%
! TTTGATAAAGATAGTAAAGC+CGG + chr8_3:18197316-18197335 Msa1280130:CDS 25.0%
! GAAGAAGAAAAAGAAAAAGA+AGG + chr8_3:18197597-18197616 Msa1280130:CDS 25.0%
! TGAAATGTTTGCAGAAAATA+CGG + chr8_3:18197765-18197784 Msa1280130:CDS 25.0%
!!! TCAAGTTGATTTCTTTTCTA+TGG - chr8_3:18197846-18197865 None:intergenic 25.0%
! GAAATAATTCACACTTTCAA+AGG + chr8_3:18198321-18198340 Msa1280130:CDS 25.0%
! TCCAACAAAAATGAACAAAT+CGG + chr8_3:18198471-18198490 Msa1280130:CDS 25.0%
! CAACTTTACTTACTTTAAGT+AGG + chr8_3:18198523-18198542 Msa1280130:CDS 25.0%
! TCAAAGAATATGTTGTAGAT+GGG + chr8_3:18198871-18198890 Msa1280130:CDS 25.0%
! TTAACTAAGTAAAATCACTC+AGG + chr8_3:18199291-18199310 Msa1280130:intron 25.0%
!! ATTGTCTTTTCCTTTTATAC+AGG + chr8_3:18199323-18199342 Msa1280130:intron 25.0%
! GTAATATAAGATCAACTTCA+TGG - chr8_3:18199514-18199533 None:intergenic 25.0%
!!! TTTTTAAAGCAGTGGATAAA+AGG + chr8_3:18199723-18199742 Msa1280130:intron 25.0%
!!! TTTTAAAGCAGTGGATAAAA+GGG + chr8_3:18199724-18199743 Msa1280130:intron 25.0%
!!! AACATTCACAATTTTTTCTG+TGG - chr8_3:18199806-18199825 None:intergenic 25.0%
!!! CTAAAACATGTTTTTACTGT+TGG - chr8_3:18200169-18200188 None:intergenic 25.0%
! CCTTCAAACAAAATCAAAAA+AGG - chr8_3:18200209-18200228 None:intergenic 25.0%
!!! CCTTTTTTGATTTTGTTTGA+AGG + chr8_3:18200206-18200225 Msa1280130:three_prime_UTR 25.0%
! AAGAAAAGAAACAAAACAGT+TGG - chr8_3:18200320-18200339 None:intergenic 25.0%
AGAGATAACAAGTGCTAAAA+TGG - chr8_3:18196879-18196898 None:intergenic 30.0%
CAATAAAATTCAACTGGGTT+TGG - chr8_3:18196948-18196967 None:intergenic 30.0%
! CAAACCCAGTTGAATTTTAT+TGG + chr8_3:18196946-18196965 Msa1280130:intron 30.0%
CATGCCAATAAAATTCAACT+GGG - chr8_3:18196953-18196972 None:intergenic 30.0%
AGCTTTCAACATAATTGACA+TGG - chr8_3:18197015-18197034 None:intergenic 30.0%
!!! TGTTTCAATTTTTTGTCTGC+AGG + chr8_3:18197034-18197053 Msa1280130:intron 30.0%
! TTGTGAAACACAAACTTGTT+TGG + chr8_3:18197104-18197123 Msa1280130:five_prime_UTR 30.0%
!! TGGTTGATTTGTATTCTTTG+AGG + chr8_3:18197124-18197143 Msa1280130:five_prime_UTR 30.0%
TTGAGGAGAATTGAACATTA+TGG + chr8_3:18197141-18197160 Msa1280130:exon 30.0%
GGAAGGTTTATTGAATTCTT+TGG + chr8_3:18197162-18197181 Msa1280130:CDS 30.0%
GGGAAATTATAACTAACTCT+TGG - chr8_3:18197223-18197242 None:intergenic 30.0%
ATTGAAATCGATTAAAGCGA+AGG + chr8_3:18197537-18197556 Msa1280130:CDS 30.0%
TTGAAATCGATTAAAGCGAA+GGG + chr8_3:18197538-18197557 Msa1280130:CDS 30.0%
GAAAAAGAAAAAGAAGGTTG+AGG + chr8_3:18197603-18197622 Msa1280130:CDS 30.0%
TTTACTTGATTATGGTTCAG+AGG + chr8_3:18197678-18197697 Msa1280130:CDS 30.0%
!! AAATTGCACTGACTAAAGTT+GGG + chr8_3:18198199-18198218 Msa1280130:CDS 30.0%
!!! ACCGATTTGTTCATTTTTGT+TGG - chr8_3:18198475-18198494 None:intergenic 30.0%
GAAGTTTCTTCTCTTATGTA+TGG + chr8_3:18198598-18198617 Msa1280130:CDS 30.0%
TCTTATGTATGGAAAACTCT+CGG + chr8_3:18198609-18198628 Msa1280130:CDS 30.0%
GTCAAAGAATATGTTGTAGA+TGG + chr8_3:18198870-18198889 Msa1280130:CDS 30.0%
!! GTATTTCTAGAGAAATGTGT+AGG - chr8_3:18198951-18198970 None:intergenic 30.0%
! ACACATTTCTCTAGAAATAC+TGG + chr8_3:18198951-18198970 Msa1280130:CDS 30.0%
! TATTGAATTTAGAGCCTGTT+TGG + chr8_3:18198995-18199014 Msa1280130:intron 30.0%
CTCAAAAATTCAATCCAAAC+AGG - chr8_3:18199012-18199031 None:intergenic 30.0%
! TACTATTTGAGACAACTCAT+CGG + chr8_3:18199059-18199078 Msa1280130:intron 30.0%
!!! CTTATTTTTATGAGCTCTTC+AGG + chr8_3:18199117-18199136 Msa1280130:intron 30.0%
AAAATCAATATATGTGGCAG+TGG - chr8_3:18199536-18199555 None:intergenic 30.0%
TATTTCCAAAGAGTGAAACT+TGG - chr8_3:18199597-18199616 None:intergenic 30.0%
TAATAACAGGTGAAAAATCG+AGG - chr8_3:18199638-18199657 None:intergenic 30.0%
AAATAAGCAGCATGCATAAA+CGG - chr8_3:18199706-18199725 None:intergenic 30.0%
!!! ATCATTCAACGTTTTTTGTG+AGG + chr8_3:18199956-18199975 Msa1280130:exon 30.0%
! AGCCTTGTATATTTGTTAGA+CGG + chr8_3:18200033-18200052 Msa1280130:three_prime_UTR 30.0%
TTCCGTCTAACAAATATACA+AGG - chr8_3:18200038-18200057 None:intergenic 30.0%
GACGTTTCTTAATGATAGTA+TGG - chr8_3:18200080-18200099 None:intergenic 30.0%
! GAATACACGTTTTTCTATCA+GGG - chr8_3:18200271-18200290 None:intergenic 30.0%
! AGAATACACGTTTTTCTATC+AGG - chr8_3:18200272-18200291 None:intergenic 30.0%
GAATATGAAACTCACCAAGA+AGG - chr8_3:18196814-18196833 None:intergenic 35.0%
GCATGCCAATAAAATTCAAC+TGG - chr8_3:18196954-18196973 None:intergenic 35.0%
GGAGAATTGAACATTATGGA+AGG + chr8_3:18197145-18197164 Msa1280130:exon 35.0%
ACTCTTGGATTGAAACCAAA+TGG - chr8_3:18197208-18197227 None:intergenic 35.0%
CTTCTCAAATCACTTTCCTT+TGG - chr8_3:18197724-18197743 None:intergenic 35.0%
CAAAGGAAAGTGATTTGAGA+AGG + chr8_3:18197722-18197741 Msa1280130:CDS 35.0%
TTGCAGAAAATACGGAGAAA+AGG + chr8_3:18197773-18197792 Msa1280130:CDS 35.0%
AGAAAATACGGAGAAAAGGA+TGG + chr8_3:18197777-18197796 Msa1280130:CDS 35.0%
AATAGACTGTCTCAATTCTC+TGG + chr8_3:18197811-18197830 Msa1280130:CDS 35.0%
ATAGACTGTCTCAATTCTCT+GGG + chr8_3:18197812-18197831 Msa1280130:CDS 35.0%
AGAGCAGTAGCAATATTCAA+AGG - chr8_3:18197970-18197989 None:intergenic 35.0%
TCATCGCATTGCTAAGAATA+TGG + chr8_3:18197990-18198009 Msa1280130:CDS 35.0%
TATGATGAAAACTCGAAGAC+TGG + chr8_3:18198023-18198042 Msa1280130:CDS 35.0%
AAAGAGATGTCTATGCTTGT+CGG + chr8_3:18198060-18198079 Msa1280130:CDS 35.0%
! TATGTTTGAGATTCCTTGAG+CGG - chr8_3:18198115-18198134 None:intergenic 35.0%
AAGGAATCTCAAACATAGCT+TGG + chr8_3:18198118-18198137 Msa1280130:CDS 35.0%
AGGAATCTCAAACATAGCTT+GGG + chr8_3:18198119-18198138 Msa1280130:CDS 35.0%
!! ACTGCTTTACTTTTCGGAAA+TGG + chr8_3:18198164-18198183 Msa1280130:CDS 35.0%
!! GAAATTGCACTGACTAAAGT+TGG + chr8_3:18198198-18198217 Msa1280130:CDS 35.0%
!! AATTGCACTGACTAAAGTTG+GGG + chr8_3:18198200-18198219 Msa1280130:CDS 35.0%
CAAAACATTGCTAACATTGC+AGG + chr8_3:18198234-18198253 Msa1280130:CDS 35.0%
! CACCTATGAAACCTTTTGAT+TGG - chr8_3:18198443-18198462 None:intergenic 35.0%
GTTGAATCTGTTGATCGAAA+CGG + chr8_3:18198495-18198514 Msa1280130:CDS 35.0%
TTGAATCTGTTGATCGAAAC+GGG + chr8_3:18198496-18198515 Msa1280130:CDS 35.0%
AGATATCATGTTTGCTTCTC+AGG + chr8_3:18198671-18198690 Msa1280130:CDS 35.0%
ATAGAGACAACTGAAGATGT+GGG - chr8_3:18198731-18198750 None:intergenic 35.0%
! TTTTTATGAGCTCTTCAGGA+TGG + chr8_3:18199121-18199140 Msa1280130:intron 35.0%
TGTTTATCCAAAAAGGGACT+TGG + chr8_3:18199236-18199255 Msa1280130:intron 35.0%
TAAAGGAACGCCTGTATAAA+AGG - chr8_3:18199336-18199355 None:intergenic 35.0%
! TTTTATACAGGCGTTCCTTT+AGG + chr8_3:18199335-18199354 Msa1280130:intron 35.0%
TTAAGCATGGTATGTCCTAA+AGG - chr8_3:18199353-18199372 None:intergenic 35.0%
! AATGTATCGACGTTTAAGCA+TGG - chr8_3:18199366-18199385 None:intergenic 35.0%
GCTTAAACGTCGATACATTA+CGG + chr8_3:18199367-18199386 Msa1280130:CDS 35.0%
TGCATAAACGGATAAACTGA+TGG - chr8_3:18199694-18199713 None:intergenic 35.0%
!!! GCTGCTTATTTTTAAAGCAG+TGG + chr8_3:18199715-18199734 Msa1280130:intron 35.0%
!!! GATCTTTTAGAATGTCCCTT+AGG - chr8_3:18199890-18199909 None:intergenic 35.0%
TGATAACACTACATTGACAG+AGG + chr8_3:18199926-18199945 Msa1280130:CDS 35.0%
!!! CAACGTTTTTTGTGAGGTAT+CGG + chr8_3:18199962-18199981 Msa1280130:three_prime_UTR 35.0%
!!! AACGTTTTTTGTGAGGTATC+GGG + chr8_3:18199963-18199982 Msa1280130:three_prime_UTR 35.0%
AAGAAACGTCAATAACCTCA+CGG + chr8_3:18200090-18200109 Msa1280130:three_prime_UTR 35.0%
AGACATTCATGCATACACAA+GGG + chr8_3:18200365-18200384 Msa1280130:three_prime_UTR 35.0%
ATTTAAACGCCATGTTCTCG+TGG - chr8_3:18197251-18197270 None:intergenic 40.0%
! TGCATTGGATGGTGATGATA+AGG + chr8_3:18197360-18197379 Msa1280130:CDS 40.0%
! GCATTGGATGGTGATGATAA+GGG + chr8_3:18197361-18197380 Msa1280130:CDS 40.0%
AGAGGAGTCTGATATGGATT+GGG + chr8_3:18197384-18197403 Msa1280130:CDS 40.0%
GATTGGGAATCAGAGTTTGT+CGG + chr8_3:18197400-18197419 Msa1280130:CDS 40.0%
ATTGGGAATCAGAGTTTGTC+GGG + chr8_3:18197401-18197420 Msa1280130:CDS 40.0%
! TGCTCTTTTCCCCTTTTCTT+CGG - chr8_3:18197454-18197473 None:intergenic 40.0%
GCAAAAGTCAAAGTTGCTTG+AGG + chr8_3:18197471-18197490 Msa1280130:CDS 40.0%
AATCGATTAAAGCGAAGGGT+AGG + chr8_3:18197542-18197561 Msa1280130:CDS 40.0%
ATCGATTAAAGCGAAGGGTA+GGG + chr8_3:18197543-18197562 Msa1280130:CDS 40.0%
GAAAAAGAAGGTTGAGGAGA+AGG + chr8_3:18197609-18197628 Msa1280130:CDS 40.0%
TATGGTTCAGAGGAAGAGTT+TGG + chr8_3:18197688-18197707 Msa1280130:CDS 40.0%
AAATCACTTTCCTTTGGCTG+TGG - chr8_3:18197718-18197737 None:intergenic 40.0%
AAGGCAAGTGAGTTTGATTG+CGG + chr8_3:18197741-18197760 Msa1280130:CDS 40.0%
TACGTACGAAACAATTGTCG+CGG + chr8_3:18197912-18197931 Msa1280130:CDS 40.0%
GCAATATTCAAAGGTGAGAG+AGG - chr8_3:18197961-18197980 None:intergenic 40.0%
!! AGGCGAACTGCTTTACTTTT+CGG + chr8_3:18198158-18198177 Msa1280130:CDS 40.0%
! TTTTCGCAGAACTGTCGAAA+AGG + chr8_3:18198292-18198311 Msa1280130:CDS 40.0%
TTTCGCAGAACTGTCGAAAA+GGG + chr8_3:18198293-18198312 Msa1280130:CDS 40.0%
! AAGAACTTGCACAGCTTTTG+TGG + chr8_3:18198346-18198365 Msa1280130:CDS 40.0%
! AGAACTTGCACAGCTTTTGT+GGG + chr8_3:18198347-18198366 Msa1280130:CDS 40.0%
GAATCAAATACAGTGTCAGC+AGG - chr8_3:18198393-18198412 None:intergenic 40.0%
GAAGATCATCGCCAATCAAA+AGG + chr8_3:18198429-18198448 Msa1280130:CDS 40.0%
CGCCAATCAAAAGGTTTCAT+AGG + chr8_3:18198438-18198457 Msa1280130:CDS 40.0%
TGAATCTGTTGATCGAAACG+GGG + chr8_3:18198497-18198516 Msa1280130:CDS 40.0%
ACTTTAAGTAGGGATCAGCT+TGG + chr8_3:18198534-18198553 Msa1280130:CDS 40.0%
CTTTAAGTAGGGATCAGCTT+GGG + chr8_3:18198535-18198554 Msa1280130:CDS 40.0%
! CATTTTGCCAAAGACAGCAT+AGG - chr8_3:18198574-18198593 None:intergenic 40.0%
CTATGCTGTCTTTGGCAAAA+TGG + chr8_3:18198572-18198591 Msa1280130:CDS 40.0%
AAACCCTTTGCTCCTCAAAA+TGG - chr8_3:18198635-18198654 None:intergenic 40.0%
AAAGGGTTTCAGAGCTGTAT+CGG + chr8_3:18198646-18198665 Msa1280130:CDS 40.0%
!! TCAAGCACTGGTTTACAAGA+TGG - chr8_3:18198698-18198717 None:intergenic 40.0%
! GGAATTCAAGTTTCAAGCAC+TGG - chr8_3:18198710-18198729 None:intergenic 40.0%
CATAGAGACAACTGAAGATG+TGG - chr8_3:18198732-18198751 None:intergenic 40.0%
CATCTTCAGTTGTCTCTATG+CGG + chr8_3:18198732-18198751 Msa1280130:CDS 40.0%
AACTTCGTCGTTTCAGAAAG+AGG + chr8_3:18198812-18198831 Msa1280130:CDS 40.0%
! TTGTTAGCACTGGACTTGAA+TGG + chr8_3:18198847-18198866 Msa1280130:CDS 40.0%
! TGTTAGCACTGGACTTGAAT+GGG + chr8_3:18198848-18198867 Msa1280130:CDS 40.0%
TGTTGTAGATGGGTACACTT+TGG + chr8_3:18198881-18198900 Msa1280130:CDS 40.0%
! AGTCGATAAGAAGCTTGCTT+TGG + chr8_3:18198914-18198933 Msa1280130:CDS 40.0%
! AAGGATACCAAGTCCCTTTT+TGG - chr8_3:18199246-18199265 None:intergenic 40.0%
GTCTTCCAAGTTTCACTCTT+TGG + chr8_3:18199589-18199608 Msa1280130:intron 40.0%
! CACTTTTACTTTCCTGCAGT+GGG + chr8_3:18199830-18199849 Msa1280130:intron 40.0%
!!! ACGTTTTTTGTGAGGTATCG+GGG + chr8_3:18199964-18199983 Msa1280130:three_prime_UTR 40.0%
GTGTATGCATGAATGTCTGA+TGG - chr8_3:18200363-18200382 None:intergenic 40.0%
CAGACATTCATGCATACACA+AGG + chr8_3:18200364-18200383 Msa1280130:three_prime_UTR 40.0%
ACCAAGAAGGAGAGAAGAGA+CGG - chr8_3:18196801-18196820 None:intergenic 45.0%
CAATCTATCTCCTCTAGCAC+CGG - chr8_3:18197338-18197357 None:intergenic 45.0%
! AGGAGATAGATTGGCTGCAT+TGG + chr8_3:18197345-18197364 Msa1280130:CDS 45.0%
! GATAGATTGGCTGCATTGGA+TGG + chr8_3:18197349-18197368 Msa1280130:CDS 45.0%
TAAGGGAGAGGAGTCTGATA+TGG + chr8_3:18197378-18197397 Msa1280130:CDS 45.0%
GAGAGGAGTCTGATATGGAT+TGG + chr8_3:18197383-18197402 Msa1280130:CDS 45.0%
TTGGGAATCAGAGTTTGTCG+GGG + chr8_3:18197402-18197421 Msa1280130:CDS 45.0%
ATCAGAGTTTGTCGGGGAAT+TGG + chr8_3:18197408-18197427 Msa1280130:CDS 45.0%
TTACCGAGCTCCGAAGAAAA+GGG + chr8_3:18197441-18197460 Msa1280130:CDS 45.0%
AAGTTGCTTGAGGATACCGA+TGG + chr8_3:18197481-18197500 Msa1280130:CDS 45.0%
AGGATACCGATGGAATGGAT+TGG + chr8_3:18197491-18197510 Msa1280130:CDS 45.0%
CACACACCAATCCATTCCAT+CGG - chr8_3:18197500-18197519 None:intergenic 45.0%
!! ATGGAATGGATTGGTGTGTG+AGG + chr8_3:18197500-18197519 Msa1280130:CDS 45.0%
!! TGGAATGGATTGGTGTGTGA+GGG + chr8_3:18197501-18197520 Msa1280130:CDS 45.0%
GGCTTATGCGATGGAAGATT+TGG + chr8_3:18197564-18197583 Msa1280130:CDS 45.0%
AAAGAAGGTTGAGGAGAAGG+TGG + chr8_3:18197612-18197631 Msa1280130:CDS 45.0%
ACAATTGTCGCGGTTGCAAA+AGG + chr8_3:18197922-18197941 Msa1280130:CDS 45.0%
TTCAAAGGTGAGAGAGGTGA+GGG - chr8_3:18197955-18197974 None:intergenic 45.0%
ATTCAAAGGTGAGAGAGGTG+AGG - chr8_3:18197956-18197975 None:intergenic 45.0%
GACAGTTCTGCGAAAAGATC+GGG - chr8_3:18198288-18198307 None:intergenic 45.0%
CGACAGTTCTGCGAAAAGAT+CGG - chr8_3:18198289-18198308 None:intergenic 45.0%
!! GAAAACTCTCGGCCATTTTG+AGG + chr8_3:18198620-18198639 Msa1280130:CDS 45.0%
AAGGGTTTCAGAGCTGTATC+GGG + chr8_3:18198647-18198666 Msa1280130:CDS 45.0%
TCGTCGTTTCAGAAAGAGGT+TGG + chr8_3:18198816-18198835 Msa1280130:CDS 45.0%
GGTCATCTTCTTGTTAGCAC+TGG + chr8_3:18198837-18198856 Msa1280130:CDS 45.0%
!! AAGCTTGCTTTGGAGATCGA+TGG + chr8_3:18198924-18198943 Msa1280130:CDS 45.0%
CAACGATACGAGTTTCCAAC+CGG - chr8_3:18199396-18199415 None:intergenic 45.0%
CGTATCGTTGTCCTATCAAG+AGG + chr8_3:18199406-18199425 Msa1280130:CDS 45.0%
TTGAGAGCTGACCTCTTGAT+AGG - chr8_3:18199420-18199439 None:intergenic 45.0%
! GCACTTTTACTTTCCTGCAG+TGG + chr8_3:18199829-18199848 Msa1280130:intron 45.0%
! TTTTACTTTCCTGCAGTGGG+AGG + chr8_3:18199833-18199852 Msa1280130:intron 45.0%
! TGAACAGGTGGAGTACCTAA+GGG + chr8_3:18199872-18199891 Msa1280130:CDS 45.0%
!!! CGTTTTTTGTGAGGTATCGG+GGG + chr8_3:18199965-18199984 Msa1280130:three_prime_UTR 45.0%
AAACGTCAATAACCTCACGG+TGG + chr8_3:18200093-18200112 Msa1280130:three_prime_UTR 45.0%
! AGTTTGTCGACTAGCTCAGA+TGG - chr8_3:18200120-18200139 None:intergenic 45.0%
!! TGCTTGAGTCGTTTTACGCT+TGG + chr8_3:18200240-18200259 Msa1280130:three_prime_UTR 45.0%
!! GCTTGAGTCGTTTTACGCTT+GGG + chr8_3:18200241-18200260 Msa1280130:three_prime_UTR 45.0%
ACACAGTCTGCTTTGTCCTG+AGG + chr8_3:18196773-18196792 Msa1280130:five_prime_UTR 50.0%
ACCGTCTCTTCTCTCCTTCT+TGG + chr8_3:18196797-18196816 Msa1280130:five_prime_UTR 50.0%
! TCTGCAGGAACACCCTTTTG+TGG + chr8_3:18197049-18197068 Msa1280130:intron 50.0%
TCCCAGTTACCACGAGAACA+TGG + chr8_3:18197239-18197258 Msa1280130:CDS 50.0%
GCCATGTTCTCGTGGTAACT+GGG - chr8_3:18197243-18197262 None:intergenic 50.0%
! GATAGTAAAGCCGGTGCTAG+AGG + chr8_3:18197325-18197344 Msa1280130:CDS 50.0%
! CGGTGCTAGAGGAGATAGAT+TGG + chr8_3:18197336-18197355 Msa1280130:CDS 50.0%
! GGATGGTGATGATAAGGGAG+AGG + chr8_3:18197366-18197385 Msa1280130:CDS 50.0%
TTCGGAGCTCGGTAACCAAA+CGG - chr8_3:18197436-18197455 None:intergenic 50.0%
GTTACCGAGCTCCGAAGAAA+AGG + chr8_3:18197440-18197459 Msa1280130:CDS 50.0%
TACCGAGCTCCGAAGAAAAG+GGG + chr8_3:18197442-18197461 Msa1280130:CDS 50.0%
! TTCCCCTTTTCTTCGGAGCT+CGG - chr8_3:18197447-18197466 None:intergenic 50.0%
GCTTGAGGATACCGATGGAA+TGG + chr8_3:18197486-18197505 Msa1280130:CDS 50.0%
GCAGACTGCAGATGATGTGT+TGG + chr8_3:18197885-18197904 Msa1280130:CDS 50.0%
TCAAAGGTGAGAGAGGTGAG+GGG - chr8_3:18197954-18197973 None:intergenic 50.0%
! ATTCCTTGAGCGGAGCATTC+AGG - chr8_3:18198105-18198124 None:intergenic 50.0%
AAGCAGTTCGCCTCCAACTT+TGG - chr8_3:18198151-18198170 None:intergenic 50.0%
ATCAGCTTGGGACGATAGCT+TGG + chr8_3:18198547-18198566 Msa1280130:CDS 50.0%
GCTTGGTCCTATGCTGTCTT+TGG + chr8_3:18198564-18198583 Msa1280130:CDS 50.0%
!! TCGGCCATTTTGAGGAGCAA+AGG + chr8_3:18198628-18198647 Msa1280130:CDS 50.0%
!! CGGCCATTTTGAGGAGCAAA+GGG + chr8_3:18198629-18198648 Msa1280130:CDS 50.0%
GAGGATAAAGTTTCCAGCGC+TGG + chr8_3:18198762-18198781 Msa1280130:CDS 50.0%
!! CCTTTTCGTTTTTCCAGCGC+TGG - chr8_3:18198778-18198797 None:intergenic 50.0%
! CCAGCGCTGGAAAAACGAAA+AGG + chr8_3:18198775-18198794 Msa1280130:CDS 50.0%
AGTGGGAGGAACTTCAAGGA+GGG + chr8_3:18199847-18199866 Msa1280130:intron 50.0%
ACTTCAAGGAGGGTCTGAAC+AGG + chr8_3:18199857-18199876 Msa1280130:CDS 50.0%
! CTGAACAGGTGGAGTACCTA+AGG + chr8_3:18199871-18199890 Msa1280130:CDS 50.0%
!! GAGTCGTTTTACGCTTGGGT+CGG + chr8_3:18200245-18200264 Msa1280130:three_prime_UTR 50.0%
GAGAGAAGAGACGGTTCCTC+AGG - chr8_3:18196792-18196811 None:intergenic 55.0%
CGCCATGTTCTCGTGGTAAC+TGG - chr8_3:18197244-18197263 None:intergenic 55.0%
GTCGGGGAATTGGATCCGTT+TGG + chr8_3:18197418-18197437 Msa1280130:CDS 55.0%
GAAGGGTAGGGCTTATGCGA+TGG + chr8_3:18197555-18197574 Msa1280130:CDS 55.0%
GTTTGGACTGCCACAGCCAA+AGG + chr8_3:18197705-18197724 Msa1280130:CDS 55.0%
! TTGAGCGGAGCATTCAGGCA+AGG - chr8_3:18198100-18198119 None:intergenic 55.0%
TTGCCTGAATGCTCCGCTCA+AGG + chr8_3:18198099-18198118 Msa1280130:CDS 55.0%
! GCTTGGGCACTGTCCAAAGT+TGG + chr8_3:18198135-18198154 Msa1280130:CDS 55.0%
! TGGGCACTGTCCAAAGTTGG+AGG + chr8_3:18198138-18198157 Msa1280130:CDS 55.0%
GTCTCTATGCGGTGAGCTTG+AGG + chr8_3:18198743-18198762 Msa1280130:CDS 55.0%
CGTCGATACATTACGGCTGC+CGG + chr8_3:18199374-18199393 Msa1280130:CDS 55.0%
GATACATTACGGCTGCCGGT+TGG + chr8_3:18199378-18199397 Msa1280130:CDS 55.0%
CTTGAAGTTCCTCCCACTGC+AGG - chr8_3:18199845-18199864 None:intergenic 55.0%
CTGCAGTGGGAGGAACTTCA+AGG + chr8_3:18199843-18199862 Msa1280130:intron 55.0%
CAGTGGGAGGAACTTCAAGG+AGG + chr8_3:18199846-18199865 Msa1280130:intron 55.0%
TCAAGGAGGGTCTGAACAGG+TGG + chr8_3:18199860-18199879 Msa1280130:CDS 55.0%
TTGGTGTGTGAGGGCGAGAG+AGG + chr8_3:18197510-18197529 Msa1280130:CDS 60.0%
AGCTCAGATGGTCCACCGTG+AGG - chr8_3:18200108-18200127 None:intergenic 60.0%
GTGTGTGAGGGCGAGAGAGG+TGG + chr8_3:18197513-18197532 Msa1280130:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 18196745 18200414 18196745 ID=Msa1280130;Name=Msa1280130
chr8_3 mRNA 18196745 18200414 18196745 ID=Msa1280130-mRNA-1;Parent=Msa1280130;Name=Msa1280130-mRNA-1;_AED=0.01;_eAED=0.01;_QI=178|1|1|1|0.66|0.5|4|458|667
chr8_3 exon 18196745 18196818 18196745 ID=Msa1280130-mRNA-1:exon:6908;Parent=Msa1280130-mRNA-1
chr8_3 exon 18197056 18198972 18197056 ID=Msa1280130-mRNA-1:exon:6909;Parent=Msa1280130-mRNA-1
chr8_3 exon 18199345 18199427 18199345 ID=Msa1280130-mRNA-1:exon:6910;Parent=Msa1280130-mRNA-1
chr8_3 exon 18199849 18200414 18199849 ID=Msa1280130-mRNA-1:exon:6911;Parent=Msa1280130-mRNA-1
chr8_3 five_prime_UTR 18196745 18196818 18196745 ID=Msa1280130-mRNA-1:five_prime_utr;Parent=Msa1280130-mRNA-1
chr8_3 five_prime_UTR 18197056 18197159 18197056 ID=Msa1280130-mRNA-1:five_prime_utr;Parent=Msa1280130-mRNA-1
chr8_3 CDS 18197160 18198972 18197160 ID=Msa1280130-mRNA-1:cds;Parent=Msa1280130-mRNA-1
chr8_3 CDS 18199345 18199427 18199345 ID=Msa1280130-mRNA-1:cds;Parent=Msa1280130-mRNA-1
chr8_3 CDS 18199849 18199956 18199849 ID=Msa1280130-mRNA-1:cds;Parent=Msa1280130-mRNA-1
chr8_3 three_prime_UTR 18199957 18200414 18199957 ID=Msa1280130-mRNA-1:three_prime_utr;Parent=Msa1280130-mRNA-1
Gene Sequence

>Msa1280130

ATGGAAGGTTTATTGAATTCTTTGGTTAATCAAAGTTGTTTAAAACCATTTGGTTTCAATCCAAGAGTTAGTTATAATTTCCCAGTTACCACGAGAACATGGCGTTTAAATCGAAAACTTGATTCGTATAATACATTGAGAATCGATTGCACACGTTTTGATAAAGATAGTAAAGCCGGTGCTAGAGGAGATAGATTGGCTGCATTGGATGGTGATGATAAGGGAGAGGAGTCTGATATGGATTGGGAATCAGAGTTTGTCGGGGAATTGGATCCGTTTGGTTACCGAGCTCCGAAGAAAAGGGGAAAAGAGCAAAAGTCAAAGTTGCTTGAGGATACCGATGGAATGGATTGGTGTGTGAGGGCGAGAGAGGTGGCATTGAAATCGATTAAAGCGAAGGGTAGGGCTTATGCGATGGAAGATTTGGTAACTGTTAAGAAGAAGAAAAAGAAAAAGAAGGTTGAGGAGAAGGTGGTAAGCAAGAAGAAAACTGAGAAGAAAATAGATGAAATAGAAGATTTACTTGATTATGGTTCAGAGGAAGAGTTTGGACTGCCACAGCCAAAGGAAAGTGATTTGAGAAGGCAAGTGAGTTTGATTGCGGATGAAATGTTTGCAGAAAATACGGAGAAAAGGATGGAAACGTTTTACAATAGACTGTCTCAATTCTCTGGGATATCTGACCATAGAAAAGAAATCAACTTGAACAAAGCGATTATTGAATCGCAGACTGCAGATGATGTGTTGGATGTTACGTACGAAACAATTGTCGCGGTTGCAAAAGGATTGAGCCCCTCACCTCTCTCACCTTTGAATATTGCTACTGCTCTTCATCGCATTGCTAAGAATATGGAGAAAGTTTCTATGATGAAAACTCGAAGACTGGCTTTTGCTCGACAAAAAGAGATGTCTATGCTTGTCGGCGTTGCAATGACAGCCTTGCCTGAATGCTCCGCTCAAGGAATCTCAAACATAGCTTGGGCACTGTCCAAAGTTGGAGGCGAACTGCTTTACTTTTCGGAAATGGATAGAATTGCAGAAATTGCACTGACTAAAGTTGGGGAATTAAACTCTCAAAACATTGCTAACATTGCAGGTGCTTTCGCTTCAATGCAGCATTCAGCTCCCGATCTTTTCGCAGAACTGTCGAAAAGGGCTTCAGAAATAATTCACACTTTCAAAGGGCAAGAACTTGCACAGCTTTTGTGGGCTTTTGCATCTCTATATGAGCCTGCTGACACTGTATTTGATTCTTTAGATACACTCTTCGAAGATCATCGCCAATCAAAAGGTTTCATAGGTGAAAACACATCCAACAAAAATGAACAAATCGGTGTTGAATCTGTTGATCGAAACGGGGACTCAACTTTACTTACTTTAAGTAGGGATCAGCTTGGGACGATAGCTTGGTCCTATGCTGTCTTTGGCAAAATGGACAGAAGTTTCTTCTCTTATGTATGGAAAACTCTCGGCCATTTTGAGGAGCAAAGGGTTTCAGAGCTGTATCGGGAAGATATCATGTTTGCTTCTCAGGTCCATCTTGTAAACCAGTGCTTGAAACTTGAATTCCCACATCTTCAGTTGTCTCTATGCGGTGAGCTTGAGGATAAAGTTTCCAGCGCTGGAAAAACGAAAAGGTTTAATCAGAAGATAACTTCGTCGTTTCAGAAAGAGGTTGGTCATCTTCTTGTTAGCACTGGACTTGAATGGGTCAAAGAATATGTTGTAGATGGGTACACTTTGGATGCTGTGATAGTCGATAAGAAGCTTGCTTTGGAGATCGATGGTCCTACACATTTCTCTAGAAATACTGGCGTTCCTTTAGGACATACCATGCTTAAACGTCGATACATTACGGCTGCCGGTTGGAAACTCGTATCGTTGTCCTATCAAGAGTGGGAGGAACTTCAAGGAGGGTCTGAACAGGTGGAGTACCTAAGGGACATTCTAAAAGATCATTTAGACAAAAAATATGATAACACTACATTGACAGAGGTAAAGTGA

Protein sequence

>Msa1280130

MEGLLNSLVNQSCLKPFGFNPRVSYNFPVTTRTWRLNRKLDSYNTLRIDCTRFDKDSKAGARGDRLAALDGDDKGEESDMDWESEFVGELDPFGYRAPKKRGKEQKSKLLEDTDGMDWCVRAREVALKSIKAKGRAYAMEDLVTVKKKKKKKKVEEKVVSKKKTEKKIDEIEDLLDYGSEEEFGLPQPKESDLRRQVSLIADEMFAENTEKRMETFYNRLSQFSGISDHRKEINLNKAIIESQTADDVLDVTYETIVAVAKGLSPSPLSPLNIATALHRIAKNMEKVSMMKTRRLAFARQKEMSMLVGVAMTALPECSAQGISNIAWALSKVGGELLYFSEMDRIAEIALTKVGELNSQNIANIAGAFASMQHSAPDLFAELSKRASEIIHTFKGQELAQLLWAFASLYEPADTVFDSLDTLFEDHRQSKGFIGENTSNKNEQIGVESVDRNGDSTLLTLSRDQLGTIAWSYAVFGKMDRSFFSYVWKTLGHFEEQRVSELYREDIMFASQVHLVNQCLKLEFPHLQLSLCGELEDKVSSAGKTKRFNQKITSSFQKEVGHLLVSTGLEWVKEYVVDGYTLDAVIVDKKLALEIDGPTHFSRNTGVPLGHTMLKRRYITAAGWKLVSLSYQEWEELQGGSEQVEYLRDILKDHLDKKYDNTTLTEVK*