AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1301720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1301720 MtrunA17_Chr4g0065241 90.698 344 3 3 1 318 1 341 0.0 631
Msa1301720 MtrunA17_Chr2g0305101 67.391 368 68 8 1 318 1 366 6.96e-166 466
Msa1301720 MtrunA17_Chr1g0149651 71.269 268 47 4 68 306 169 435 3.52e-134 388
Msa1301720 MtrunA17_Chr3g0137241 69.403 268 48 3 71 306 105 370 3.58e-131 378
Msa1301720 MtrunA17_Chr5g0398181 59.058 276 83 2 70 315 25 300 2.26e-111 325
Msa1301720 MtrunA17_Chr1g0192791 34.874 238 130 7 70 291 17 245 6.43e-28 109
Msa1301720 MtrunA17_Chr2g0289201 33.480 227 136 5 73 291 118 337 1.24e-27 110
Msa1301720 MtrunA17_Chr1g0151961 32.353 238 144 5 63 291 113 342 3.32e-26 107
Msa1301720 MtrunA17_Chr5g0413201 33.333 231 133 5 73 291 73 294 2.28e-25 103
Msa1301720 MtrunA17_Chr5g0439391 32.743 226 132 6 75 291 49 263 6.14e-22 93.6
Msa1301720 MtrunA17_Chr4g0028701 27.957 186 112 5 110 291 362 529 3.07e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1301720 AT5G11060.1 71.587 271 48 3 72 315 123 391 4.12e-136 392
Msa1301720 AT5G25220.1 70.803 274 45 3 72 315 159 427 1.82e-135 391
Msa1301720 AT5G25220.2 71.321 265 41 3 72 306 159 418 7.45e-132 382
Msa1301720 AT4G32040.1 56.667 330 99 10 21 309 55 381 3.56e-113 333
Msa1301720 AT4G32040.2 57.187 327 96 10 21 306 55 378 3.93e-113 333
Msa1301720 AT1G62990.1 55.474 274 95 3 60 306 17 290 5.02e-106 311
Msa1301720 AT1G23380.1 35.556 270 140 10 34 291 58 305 3.54e-31 119
Msa1301720 AT1G70510.1 36.134 238 123 8 69 291 66 289 1.10e-30 118
Msa1301720 AT1G70510.2 34.874 238 130 7 69 291 66 293 1.98e-29 114
Msa1301720 AT1G23380.2 35.294 272 140 11 34 291 58 307 2.23e-29 115
Msa1301720 AT4G08150.1 35.319 235 127 6 73 291 135 360 2.98e-29 115
Msa1301720 AT1G62360.1 33.480 227 138 5 73 291 122 343 5.86e-24 101

Find 99 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGGAGCTTGATCACTTTA+TGG 0.159839 8_3:-63879562 Msa1301720:intron
TTCTGTTGGAATTGGAAATA+TGG 0.205132 8_3:-63879589 Msa1301720:CDS
CTACCTCTTGCGCTTGGTTT+TGG 0.213600 8_3:+63875128 None:intergenic
CGCGTTGATCTATAAATAAA+TGG 0.223815 8_3:+63880112 None:intergenic
CTCTATCTATTAGATTTAAT+TGG 0.266192 8_3:-63874667 Msa1301720:three_prime_UTR
AAATATTCTTCTGTTGGAAT+TGG 0.277819 8_3:-63879597 Msa1301720:CDS
GAATACAAAGCAGAGATATT+AGG 0.306187 8_3:-63879738 Msa1301720:CDS
GAGAAAATTAAGAAGAGAAT+AGG 0.318203 8_3:+63880009 None:intergenic
AGAAAATTAAGAAGAGAATA+GGG 0.334294 8_3:+63880010 None:intergenic
AATTAAAGCAAATAAATAAC+TGG 0.339856 8_3:-63875206 Msa1301720:CDS
GGTGGCAATCACATTCTAAA+TGG 0.351052 8_3:-63875386 Msa1301720:CDS
TAAGTTGTTGAATGTTGATT+TGG 0.356635 8_3:+63880049 None:intergenic
ATCATTTGAAATGAATGATA+AGG 0.358915 8_3:-63874515 Msa1301720:three_prime_UTR
TTTCGCAATTGTTGTCATTC+CGG 0.366302 8_3:+63879775 None:intergenic
GCTAGATTGGTGCAGGAAAC+AGG 0.372105 8_3:-63875234 Msa1301720:CDS
TAATGGAATACGGATGTAGA+AGG 0.377369 8_3:-63874831 Msa1301720:three_prime_UTR
GCTCATGAATGTGAAAATAA+TGG 0.383442 8_3:-63874848 Msa1301720:three_prime_UTR
AACGAAGGAAGCAGCCTTGA+TGG 0.386285 8_3:-63875603 Msa1301720:CDS
TCAACAGAATTTCATGCAAA+TGG 0.400557 8_3:-63879835 Msa1301720:CDS
GGAAAATTGTGATGAGTAAG+AGG 0.404300 8_3:+63880169 None:intergenic
TCCTTGCATTGTTAAATATG+AGG 0.412707 8_3:-63874749 Msa1301720:three_prime_UTR
AGAAAATTCGACGGTGGGAT+TGG 0.421622 8_3:+63880136 None:intergenic
TGGAGGCAGTGATGGCTTGT+TGG 0.423089 8_3:-63877068 Msa1301720:CDS
GCTGGAAAGCTATTTCTTGT+TGG 0.428428 8_3:+63879928 None:intergenic
GGAGGCAGTGATGGCTTGTT+GGG 0.429166 8_3:-63877067 Msa1301720:CDS
TACATAGAATTAAATACAGC+AGG 0.434683 8_3:-63874556 Msa1301720:three_prime_UTR
ATTATGAGCAGGTGTATCTT+CGG 0.435057 8_3:-63875694 Msa1301720:intron
ATTCTACGAAAGAGAAGAGC+TGG 0.436569 8_3:-63875447 Msa1301720:CDS
CAGTCTCTGCAAAGCTTGAC+AGG 0.437852 8_3:-63877036 Msa1301720:intron
GGCGTCGATACTCTTGGCCT+TGG 0.438378 8_3:-63875582 Msa1301720:intron
CATAAAGTGATCAAGCTCCT+TGG 0.444189 8_3:+63879563 None:intergenic
ATCCTTGGAAGCTGATCAAC+CGG 0.446297 8_3:+63879657 None:intergenic
ATTGCCACCAAGCTTTCAAA+AGG 0.450033 8_3:+63875400 None:intergenic
ATGATATCTTACAGTTGGAT+AGG 0.453843 8_3:+63875362 None:intergenic
CTTGATGGCGTCGATACTCT+TGG 0.455242 8_3:-63875588 Msa1301720:CDS
GGAGGAAGATAAGGCTAGAT+TGG 0.457401 8_3:-63875247 Msa1301720:CDS
AGAAGAAGAAGATGAAGAAA+GGG 0.460074 8_3:-63879898 Msa1301720:CDS
TTGTTGCAACTGTTCTTTGA+AGG 0.460514 8_3:+63877110 None:intergenic
TGCTGCTTGATATCTGATAT+CGG 0.461258 8_3:-63874699 Msa1301720:three_prime_UTR
GATTGATGCTCAGCTTCAAC+AGG 0.462130 8_3:-63879637 Msa1301720:CDS
CAGAAGAAGAAGATGAAGAA+AGG 0.465111 8_3:-63879899 Msa1301720:CDS
TCAATCAAAGGAAAAGGAAC+TGG 0.471396 8_3:-63875179 Msa1301720:CDS
AGAAGAGCTGGGAAACTCCC+TGG 0.471897 8_3:-63875435 Msa1301720:CDS
GTATCTTCGGGTGAAGGAAC+AGG 0.474653 8_3:-63875681 Msa1301720:CDS
ATAAAGTGATCAAGCTCCTT+GGG 0.475708 8_3:+63879564 None:intergenic
AAAAGGGATGTGGTGTCCCC+AGG 0.478534 8_3:+63875417 None:intergenic
ATATCTGATATCGGAGGATA+AGG 0.492116 8_3:-63874690 Msa1301720:three_prime_UTR
ATTAGATTTAATTGGTAGCA+TGG 0.494188 8_3:-63874659 Msa1301720:three_prime_UTR
TTATGAGCAGGTGTATCTTC+GGG 0.502400 8_3:-63875693 Msa1301720:intron
GTCAGACGATGAAGATGAGC+AGG 0.503765 8_3:-63875649 Msa1301720:CDS
GCGTTGATCTATAAATAAAT+GGG 0.507845 8_3:+63880113 None:intergenic
CACCGGTTGATCAGCTTCCA+AGG 0.508909 8_3:-63879659 Msa1301720:CDS
AAGATGAAGAAAGGGCATCC+TGG 0.510979 8_3:-63879890 Msa1301720:CDS
TGATATCTTACAGTTGGATA+GGG 0.514183 8_3:+63875363 None:intergenic
GAAGAGCTGGGAAACTCCCT+GGG 0.514675 8_3:-63875434 Msa1301720:CDS
TGAAGCTGAGCATCAATCCT+TGG 0.515964 8_3:+63879642 None:intergenic
TAAGGAAATGACTTATTGGA+AGG 0.516022 8_3:+63880083 None:intergenic
ATGGTACTACCTCTTGCGCT+TGG 0.518902 8_3:+63875122 None:intergenic
GGTTTATCAATCAAAGGAAA+AGG 0.523630 8_3:-63875185 Msa1301720:CDS
TCATGCCATGGAGGCAGTGA+TGG 0.523998 8_3:-63877076 Msa1301720:CDS
GCTCCAAAACCAAGCGCAAG+AGG 0.527063 8_3:-63875131 Msa1301720:intron
AATGGAATACGGATGTAGAA+GGG 0.530028 8_3:-63874830 Msa1301720:three_prime_UTR
CTTCTTCTTCTGTGAAACGC+TGG 0.532142 8_3:+63879910 None:intergenic
AGATAAGGCTAGATTGGTGC+AGG 0.536981 8_3:-63875241 Msa1301720:CDS
CGCAATTGTTGTCATTCCGG+TGG 0.538196 8_3:+63879778 None:intergenic
TTTGGAGCTACTAGAGGATG+GGG 0.544084 8_3:+63875146 None:intergenic
AATGTGAAAATAATGGAATA+CGG 0.544166 8_3:-63874841 Msa1301720:three_prime_UTR
AAAGCATGGATCGGAACCAC+CGG 0.544529 8_3:-63879794 Msa1301720:CDS
GTGTCTCAGAATTGCGACAC+CGG 0.547847 8_3:-63879676 Msa1301720:CDS
ACCTCATATTTAACAATGCA+AGG 0.554022 8_3:+63874748 None:intergenic
ACAAGCCATCACTGCCTCCA+TGG 0.554613 8_3:+63877071 None:intergenic
GCAGGTGTATCTTCGGGTGA+AGG 0.559026 8_3:-63875687 Msa1301720:intron
ATAACTGGTTTATCAATCAA+AGG 0.563797 8_3:-63875191 Msa1301720:CDS
CGGTGGGATTGGTGATAACG+TGG 0.566878 8_3:+63880147 None:intergenic
CCAAGCTTTCAAAAGGGATG+TGG 0.573990 8_3:+63875407 None:intergenic
AAAGGGATGTGGTGTCCCCA+GGG 0.576707 8_3:+63875418 None:intergenic
TGAACTCAAACAAGGTTACA+AGG 0.578875 8_3:-63875496 Msa1301720:intron
TTCTACGAAAGAGAAGAGCT+GGG 0.579028 8_3:-63875446 Msa1301720:CDS
ACATGTCCGTGTTCATGCCA+TGG 0.585181 8_3:-63877088 Msa1301720:CDS
TCATGCAAATGGAACCAGAA+AGG 0.585338 8_3:-63879824 Msa1301720:CDS
ATGGGAGAAAATTCGACGGT+GGG 0.589719 8_3:+63880131 None:intergenic
GCAAATGGAACCAGAAAGGA+GGG 0.590244 8_3:-63879820 Msa1301720:CDS
GAATGACAACAATTGCGAAA+CGG 0.591352 8_3:-63879772 Msa1301720:CDS
GATAATAATTGATCATAGAG+TGG 0.604741 8_3:+63879711 None:intergenic
TGCAAATGGAACCAGAAAGG+AGG 0.604949 8_3:-63879821 Msa1301720:CDS
CAAGAGTATCGACGCCATCA+AGG 0.607066 8_3:+63875589 None:intergenic
TTGCCACCAAGCTTTCAAAA+GGG 0.608799 8_3:+63875401 None:intergenic
ATGGAATACGGATGTAGAAG+GGG 0.610725 8_3:-63874829 Msa1301720:three_prime_UTR
AATTGGAAATATGGATCCCA+AGG 0.614560 8_3:-63879580 Msa1301720:CDS
CTGCCTCCATGGCATGAACA+CGG 0.617572 8_3:+63877082 None:intergenic
AACGCTAGGTTATACAACGA+AGG 0.654984 8_3:-63875618 Msa1301720:CDS
AGCAGGCAGAGAGTAACGCT+AGG 0.662764 8_3:-63875632 Msa1301720:CDS
AATGGGAGAAAATTCGACGG+TGG 0.666875 8_3:+63880130 None:intergenic
ACATAGAATTAAATACAGCA+GGG 0.684339 8_3:-63874555 Msa1301720:three_prime_UTR
TGTCCGTGTTCATGCCATGG+AGG 0.690107 8_3:-63877085 Msa1301720:CDS
ATAAATGGGAGAAAATTCGA+CGG 0.695413 8_3:+63880127 None:intergenic
TGCTTGATATCTGATATCGG+AGG 0.696705 8_3:-63874696 Msa1301720:three_prime_UTR
GGTGGGATTGGTGATAACGT+GGG 0.704272 8_3:+63880148 None:intergenic
AAGAGCTGGGAAACTCCCTG+GGG 0.766388 8_3:-63875433 Msa1301720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTAAGACATTATTTTA+TGG - chr8_3:63875405-63875424 Msa1301720:CDS 10.0%
!! TAAAAACAAACATAATAAAA+TGG - chr8_3:63875483-63875502 Msa1301720:CDS 10.0%
!!! AAAATTTTTTATCTTGAAAA+TGG - chr8_3:63876556-63876575 Msa1301720:intron 10.0%
!!! ATTTGTTAATAATTCAAAAA+AGG + chr8_3:63876642-63876661 None:intergenic 10.0%
!! AAATAATGTTGTATTTAAAA+AGG - chr8_3:63878433-63878452 Msa1301720:intron 10.0%
!!! TTAGTCATATAAAATTTTAA+TGG + chr8_3:63878664-63878683 None:intergenic 10.0%
!! AATTATAAACATTAAATGTA+CGG + chr8_3:63878758-63878777 None:intergenic 10.0%
!!! ATATATATGAATTGTTTTAT+AGG - chr8_3:63879415-63879434 Msa1301720:intron 10.0%
!!! TTTCTAAGATATTTTATGAA+AGG - chr8_3:63875514-63875533 Msa1301720:intron 15.0%
!! CATTTAAATTTACAATATGT+AGG + chr8_3:63875615-63875634 None:intergenic 15.0%
!! CTACATATTGTAAATTTAAA+TGG - chr8_3:63875613-63875632 Msa1301720:CDS 15.0%
!! GACTATTTAACAATTAAATA+AGG - chr8_3:63875771-63875790 Msa1301720:intron 15.0%
!! TTTAACAATTAAATAAGGAT+AGG - chr8_3:63875776-63875795 Msa1301720:intron 15.0%
!! AAAAAGAGAAAAAATAGTAA+AGG + chr8_3:63875885-63875904 None:intergenic 15.0%
!! AAAAAAAACTCACTAAAAAA+AGG + chr8_3:63876745-63876764 None:intergenic 15.0%
!! AAAAAAAAAAAAATTGTTCC+TGG - chr8_3:63877213-63877232 Msa1301720:intron 15.0%
!! ATTCAAATTCAAATAATGAT+CGG - chr8_3:63877244-63877263 Msa1301720:intron 15.0%
!! AACCCTAAATAAATATTATT+TGG - chr8_3:63877306-63877325 Msa1301720:intron 15.0%
!! GTCCAAATAATATTTATTTA+GGG + chr8_3:63877311-63877330 None:intergenic 15.0%
!! TGTCCAAATAATATTTATTT+AGG + chr8_3:63877312-63877331 None:intergenic 15.0%
!! CAAACTCAAATAAAAATATT+TGG + chr8_3:63877430-63877449 None:intergenic 15.0%
!!! TTATTATGATTAGTTGTATA+GGG - chr8_3:63877762-63877781 Msa1301720:intron 15.0%
!! AAAAATAATAAACAATCCTT+TGG + chr8_3:63878175-63878194 None:intergenic 15.0%
!! CTAAAATAATCCATATAAAA+TGG + chr8_3:63878555-63878574 None:intergenic 15.0%
!!! TTTTATATGGATTATTTTAG+AGG - chr8_3:63878555-63878574 Msa1301720:intron 15.0%
!! TCTTATAAACTACATTATTA+TGG - chr8_3:63878625-63878644 Msa1301720:intron 15.0%
!! AAAGTTCTTCAAATAAAAAA+GGG + chr8_3:63878729-63878748 None:intergenic 15.0%
!! AAAAGTTCTTCAAATAAAAA+AGG + chr8_3:63878730-63878749 None:intergenic 15.0%
!! AATTAAAGCAAATAAATAAC+TGG - chr8_3:63879477-63879496 Msa1301720:intron 15.0%
!! AGAAAATTAAGAAGAGAATA+GGG + chr8_3:63874676-63874695 None:intergenic 20.0%
!! AACAAGACAACAATAAATAA+TGG - chr8_3:63875168-63875187 Msa1301720:CDS 20.0%
!! TTACTATGTCTCTAAATTTA+TGG - chr8_3:63875231-63875250 Msa1301720:CDS 20.0%
!! TATCTTTACAAATACGTAAT+TGG + chr8_3:63875460-63875479 None:intergenic 20.0%
!! AATCTCAAATATTAAAAGAG+TGG + chr8_3:63875564-63875583 None:intergenic 20.0%
!! CATAATTTAGTGCAATAAAT+TGG + chr8_3:63875587-63875606 None:intergenic 20.0%
!!! TAAATGGATAAAAGAGTATT+TGG - chr8_3:63875629-63875648 Msa1301720:CDS 20.0%
!! TAGTACAAATAGAAGATTAT+GGG - chr8_3:63875966-63875985 Msa1301720:intron 20.0%
!! TCACAAAAAGAATAATAATG+AGG - chr8_3:63876029-63876048 Msa1301720:intron 20.0%
!! AAGAATAATAATGAGGATAA+TGG - chr8_3:63876036-63876055 Msa1301720:intron 20.0%
!!! CAACTTTTATTATTTTCTGA+TGG - chr8_3:63876079-63876098 Msa1301720:intron 20.0%
!!! TGATAATAGTTAATTTGCTT+TGG - chr8_3:63877074-63877093 Msa1301720:CDS 20.0%
!! ATTAAATCACACTAAAAAAG+AGG + chr8_3:63877142-63877161 None:intergenic 20.0%
!!! GTTATTATGATTAGTTGTAT+AGG - chr8_3:63877761-63877780 Msa1301720:intron 20.0%
!! CATACTAGTTATATAATAGA+AGG - chr8_3:63878238-63878257 Msa1301720:intron 20.0%
!!! AATTTGTCTCATTTTGTATT+GGG - chr8_3:63878473-63878492 Msa1301720:intron 20.0%
!! ATCCATATAAAATGGAAATA+TGG + chr8_3:63878547-63878566 None:intergenic 20.0%
!!! TGAAAACTTTTTACAAAGAA+TGG + chr8_3:63878592-63878611 None:intergenic 20.0%
!! TATAAACTACATTATTATGG+AGG - chr8_3:63878628-63878647 Msa1301720:intron 20.0%
!! TATTAATGATATCTTACAGT+TGG + chr8_3:63879329-63879348 None:intergenic 20.0%
!!! TATATGAATTGTTTTATAGG+AGG - chr8_3:63879418-63879437 Msa1301720:intron 20.0%
!! AACTAACATAAAATGGTTTA+TGG + chr8_3:63879583-63879602 None:intergenic 20.0%
!! AAGTCATAACTAACATAAAA+TGG + chr8_3:63879590-63879609 None:intergenic 20.0%
!!! AATGTGAAAATAATGGAATA+CGG - chr8_3:63879842-63879861 Msa1301720:CDS 20.0%
!! CTCTATCTATTAGATTTAAT+TGG - chr8_3:63880016-63880035 Msa1301720:five_prime_UTR 20.0%
!!! CTATCTATTTTTTTCAAGTA+GGG + chr8_3:63880076-63880095 None:intergenic 20.0%
!!! TCTATCTATTTTTTTCAAGT+AGG + chr8_3:63880077-63880096 None:intergenic 20.0%
!!! ATCATTTGAAATGAATGATA+AGG - chr8_3:63880168-63880187 Msa1301720:five_prime_UTR 20.0%
!!! ATGAGTAAGAGGTTTTATTT+TGG + chr8_3:63874506-63874525 None:intergenic 25.0%
!! GCGTTGATCTATAAATAAAT+GGG + chr8_3:63874573-63874592 None:intergenic 25.0%
!!! CTTTTAAGGAAATGACTTAT+TGG + chr8_3:63874607-63874626 None:intergenic 25.0%
!! TAAGTTGTTGAATGTTGATT+TGG + chr8_3:63874637-63874656 None:intergenic 25.0%
! GAGAAAATTAAGAAGAGAAT+AGG + chr8_3:63874677-63874696 None:intergenic 25.0%
! TCCAGTTCACTAAAAATAAA+TGG - chr8_3:63874716-63874735 Msa1301720:three_prime_UTR 25.0%
! GATAATAATTGATCATAGAG+TGG + chr8_3:63874975-63874994 None:intergenic 25.0%
! CTTCAAAAATATTCTTCTGT+TGG - chr8_3:63875080-63875099 Msa1301720:intron 25.0%
! AAATATTCTTCTGTTGGAAT+TGG - chr8_3:63875086-63875105 Msa1301720:intron 25.0%
! ATGGCAAAAGTTATTAAAAC+TGG - chr8_3:63875187-63875206 Msa1301720:CDS 25.0%
! AAGACACTATGAATTAAACT+AGG + chr8_3:63875350-63875369 None:intergenic 25.0%
! AAAAAACTGAAAGAAAGCTT+GGG + chr8_3:63875391-63875410 None:intergenic 25.0%
! TAAAAAACTGAAAGAAAGCT+TGG + chr8_3:63875392-63875411 None:intergenic 25.0%
!!! TAAAAGAGTATTTGGTTTCA+TGG - chr8_3:63875637-63875656 Msa1301720:CDS 25.0%
! TCTTAAATGTGGAGAAATAA+AGG + chr8_3:63875731-63875750 None:intergenic 25.0%
! CTAGTACAAATAGAAGATTA+TGG - chr8_3:63875965-63875984 Msa1301720:intron 25.0%
! CAAGATAATAACCCTTAAAT+TGG + chr8_3:63876179-63876198 None:intergenic 25.0%
! TACTATACTCCCTTTAATAA+TGG - chr8_3:63876211-63876230 Msa1301720:intron 25.0%
! TGCATTGTACCATTATTAAA+GGG + chr8_3:63876223-63876242 None:intergenic 25.0%
! ATGCATTGTACCATTATTAA+AGG + chr8_3:63876224-63876243 None:intergenic 25.0%
! AATAATGGTACAATGCATTT+AGG - chr8_3:63876226-63876245 Msa1301720:intron 25.0%
! AAAAACAGTGTAATCAAGTT+TGG + chr8_3:63876383-63876402 None:intergenic 25.0%
! CAAGCTTATCATATAATCTA+GGG + chr8_3:63876672-63876691 None:intergenic 25.0%
! ACAAGCTTATCATATAATCT+AGG + chr8_3:63876673-63876692 None:intergenic 25.0%
! GATTATATGATAAGCTTGTA+AGG - chr8_3:63876674-63876693 Msa1301720:intron 25.0%
!! TGTCCAAACAAAAATTCTTT+TGG - chr8_3:63876800-63876819 Msa1301720:intron 25.0%
!! AAGCCAAAAGAATTTTTGTT+TGG + chr8_3:63876806-63876825 None:intergenic 25.0%
! AATAGACTTAGATGCATATT+GGG - chr8_3:63876843-63876862 Msa1301720:intron 25.0%
!! TGCATATTGGGTTTTTAAAT+CGG - chr8_3:63876855-63876874 Msa1301720:intron 25.0%
! AACGATAAGAATCAAAGATA+CGG + chr8_3:63877029-63877048 None:intergenic 25.0%
!! ATGATTTTCAACATTGTTTC+TGG - chr8_3:63877178-63877197 Msa1301720:intron 25.0%
! GAATTTGAATATATCAAACC+AGG + chr8_3:63877234-63877253 None:intergenic 25.0%
! ATATTTAGTCACATCAATTG+AGG - chr8_3:63877365-63877384 Msa1301720:intron 25.0%
! CTCAATATATGTGTTTATTG+AGG + chr8_3:63877469-63877488 None:intergenic 25.0%
! CTCAATAAACACATATATTG+AGG - chr8_3:63877467-63877486 Msa1301720:intron 25.0%
! ATTATTTAAGCATGGCTAAT+TGG - chr8_3:63877491-63877510 Msa1301720:intron 25.0%
! TTATTTAAGCATGGCTAATT+GGG - chr8_3:63877492-63877511 Msa1301720:intron 25.0%
!! AGTTTCATATCTTTTTGTAG+AGG + chr8_3:63877931-63877950 None:intergenic 25.0%
!! CATTTTCACTGTTTAAAAAG+AGG - chr8_3:63878017-63878036 Msa1301720:intron 25.0%
! TTTATGCAAGAATCAAATTC+TGG - chr8_3:63878121-63878140 Msa1301720:intron 25.0%
! ATATGATTACATTCATCAGA+AGG - chr8_3:63878381-63878400 Msa1301720:intron 25.0%
!!! AACTCTTTTTTCTTCTTCAT+AGG + chr8_3:63878409-63878428 None:intergenic 25.0%
!! CAATTTGTCTCATTTTGTAT+TGG - chr8_3:63878472-63878491 Msa1301720:intron 25.0%
!! TTGAAAGCTTGTAATTTTGT+AGG + chr8_3:63878517-63878536 None:intergenic 25.0%
!! GTCCATATTTCCATTTTATA+TGG - chr8_3:63878542-63878561 Msa1301720:intron 25.0%
!!! CTTGAAAACTCTGATTTTTT+AGG - chr8_3:63878685-63878704 Msa1301720:intron 25.0%
! TTATTTGCATATCTCTATGT+TGG - chr8_3:63879353-63879372 Msa1301720:intron 25.0%
!! ATTAGATTTAATTGGTAGCA+TGG - chr8_3:63880024-63880043 Msa1301720:five_prime_UTR 25.0%
! TACATAGAATTAAATACAGC+AGG - chr8_3:63880127-63880146 Msa1301720:five_prime_UTR 25.0%
! ACATAGAATTAAATACAGCA+GGG - chr8_3:63880128-63880147 Msa1301720:five_prime_UTR 25.0%
ATAAATGGGAGAAAATTCGA+CGG + chr8_3:63874559-63874578 None:intergenic 30.0%
! CGCGTTGATCTATAAATAAA+TGG + chr8_3:63874574-63874593 None:intergenic 30.0%
TAAGGAAATGACTTATTGGA+AGG + chr8_3:63874603-63874622 None:intergenic 30.0%
!!! GATTTGGAAAAGCACTTTTA+AGG + chr8_3:63874621-63874640 None:intergenic 30.0%
! AAGAGAATAGGGAATTTTGA+GGG + chr8_3:63874665-63874684 None:intergenic 30.0%
!!! GCCATTTATTTTTAGTGAAC+TGG + chr8_3:63874720-63874739 None:intergenic 30.0%
AGAAGAAGAAGATGAAGAAA+GGG - chr8_3:63874785-63874804 Msa1301720:three_prime_UTR 30.0%
TCAACAGAATTTCATGCAAA+TGG - chr8_3:63874848-63874867 Msa1301720:three_prime_UTR 30.0%
GAATACAAAGCAGAGATATT+AGG - chr8_3:63874945-63874964 Msa1301720:CDS 30.0%
TTCTGTTGGAATTGGAAATA+TGG - chr8_3:63875094-63875113 Msa1301720:intron 30.0%
! TTGTTGTCTTGTTAGAAAAC+AGG + chr8_3:63875161-63875180 None:intergenic 30.0%
GTTTGAACTATAGTAAGAAG+TGG + chr8_3:63875316-63875335 None:intergenic 30.0%
!! ACCTTATTTCCCTAATTTTG+TGG - chr8_3:63875920-63875939 Msa1301720:intron 30.0%
TCCACAAAATTAGGGAAATA+AGG + chr8_3:63875924-63875943 None:intergenic 30.0%
AGATTATGGGATTTGTATTG+TGG - chr8_3:63875979-63875998 Msa1301720:intron 30.0%
! GATAATGGTAGAAAAATCAG+TGG - chr8_3:63876051-63876070 Msa1301720:intron 30.0%
!!! TTTTTTGCTGAAACCTTCAT+GGG - chr8_3:63876321-63876340 Msa1301720:intron 30.0%
GAATAGACTTAGATGCATAT+TGG - chr8_3:63876842-63876861 Msa1301720:intron 30.0%
! GCATATTGGGTTTTTAAATC+GGG - chr8_3:63876856-63876875 Msa1301720:intron 30.0%
ATCTTTACATTCTAACTTCG+AGG - chr8_3:63876930-63876949 Msa1301720:intron 30.0%
ATCGTTCTTGTATTGAACAT+TGG - chr8_3:63877043-63877062 Msa1301720:CDS 30.0%
CAAATTCAAATAATGATCGG+AGG - chr8_3:63877247-63877266 Msa1301720:intron 30.0%
! ATTGAGGCATTATTTAAGCA+TGG - chr8_3:63877483-63877502 Msa1301720:intron 30.0%
AAACTCTTAAAGAACCATCA+TGG - chr8_3:63877946-63877965 Msa1301720:intron 30.0%
TGAAATCCAACTAGAAACAA+TGG - chr8_3:63877980-63877999 Msa1301720:intron 30.0%
!! TTGTTTCCATTGTTTCTAGT+TGG + chr8_3:63877989-63878008 None:intergenic 30.0%
TTGGTTGCATGGAAAAAATT+TGG + chr8_3:63878156-63878175 None:intergenic 30.0%
!!! AATTTTTTCCATGCAACCAA+AGG - chr8_3:63878156-63878175 Msa1301720:intron 30.0%
! GGATATAGTCTTAAACAATG+TGG - chr8_3:63878292-63878311 Msa1301720:intron 30.0%
TTGGCAATTACTACTTTCTA+TGG + chr8_3:63878848-63878867 None:intergenic 30.0%
TACAGCATTACTATACAAAG+AGG + chr8_3:63878886-63878905 None:intergenic 30.0%
! GTCTAAGATCAATGAAACTA+TGG - chr8_3:63878960-63878979 Msa1301720:intron 30.0%
TGATATCTTACAGTTGGATA+GGG + chr8_3:63879323-63879342 None:intergenic 30.0%
ATGATATCTTACAGTTGGAT+AGG + chr8_3:63879324-63879343 None:intergenic 30.0%
! TGTTTTATAGGAGGAAGATA+AGG - chr8_3:63879427-63879446 Msa1301720:intron 30.0%
!!! ATTTTTTATGATAGCAGTGC+AGG - chr8_3:63879722-63879741 Msa1301720:CDS 30.0%
! ATATTTTTCACATGAAGCTC+TGG + chr8_3:63879760-63879779 None:intergenic 30.0%
GCTCATGAATGTGAAAATAA+TGG - chr8_3:63879835-63879854 Msa1301720:CDS 30.0%
TCCTTGCATTGTTAAATATG+AGG - chr8_3:63879934-63879953 Msa1301720:CDS 30.0%
ACCTCATATTTAACAATGCA+AGG + chr8_3:63879938-63879957 None:intergenic 30.0%
CTCACTACCAAAAAAATATG+AGG - chr8_3:63879960-63879979 Msa1301720:exon 30.0%
GGAAAATTGTGATGAGTAAG+AGG + chr8_3:63874517-63874536 None:intergenic 35.0%
! GAAGAGAATAGGGAATTTTG+AGG + chr8_3:63874666-63874685 None:intergenic 35.0%
CAGAAGAAGAAGATGAAGAA+AGG - chr8_3:63874784-63874803 Msa1301720:three_prime_UTR 35.0%
TTTCGCAATTGTTGTCATTC+CGG + chr8_3:63874911-63874930 None:intergenic 35.0%
GAATGACAACAATTGCGAAA+CGG - chr8_3:63874911-63874930 Msa1301720:three_prime_UTR 35.0%
AATTGGAAATATGGATCCCA+AGG - chr8_3:63875103-63875122 Msa1301720:intron 35.0%
ATAAAGTGATCAAGCTCCTT+GGG + chr8_3:63875122-63875141 None:intergenic 35.0%
AGACTCACACATCTTAAATG+TGG + chr8_3:63875742-63875761 None:intergenic 35.0%
CCTTAAGCTCCACAAAATTA+GGG + chr8_3:63875932-63875951 None:intergenic 35.0%
ACCTTAAGCTCCACAAAATT+AGG + chr8_3:63875933-63875952 None:intergenic 35.0%
TCAGTGAATCAGATTTGTCT+TGG - chr8_3:63876140-63876159 Msa1301720:intron 35.0%
! TGTGGCTAGTTCCAATTTAA+GGG - chr8_3:63876165-63876184 Msa1301720:intron 35.0%
TAATCTTGTCCCACTTGTTT+AGG - chr8_3:63876277-63876296 Msa1301720:intron 35.0%
!!! CTTTTTTGCTGAAACCTTCA+TGG - chr8_3:63876320-63876339 Msa1301720:intron 35.0%
! TTTTTGCTGAAACCTTCATG+GGG - chr8_3:63876322-63876341 Msa1301720:intron 35.0%
CACAGAAATGTACAATGATG+GGG + chr8_3:63876418-63876437 None:intergenic 35.0%
CCACAGAAATGTACAATGAT+GGG + chr8_3:63876419-63876438 None:intergenic 35.0%
ACCACAGAAATGTACAATGA+TGG + chr8_3:63876420-63876439 None:intergenic 35.0%
ATGAGAATGTACGTACATCT+TGG - chr8_3:63876456-63876475 Msa1301720:intron 35.0%
! CTGTACTTGTTGGCATTATT+TGG + chr8_3:63876515-63876534 None:intergenic 35.0%
! TTGTCAAGTACTGTACTTGT+TGG + chr8_3:63876525-63876544 None:intergenic 35.0%
TCACACTAAAAAAGAGGAGT+GGG + chr8_3:63877136-63877155 None:intergenic 35.0%
ATCACACTAAAAAAGAGGAG+TGG + chr8_3:63877137-63877156 None:intergenic 35.0%
TTGTTGCAACTGTTCTTTGA+AGG + chr8_3:63877576-63877595 None:intergenic 35.0%
TAAAGACTGCATTTGTCAAG+GGG + chr8_3:63877738-63877757 None:intergenic 35.0%
GTAAAGACTGCATTTGTCAA+GGG + chr8_3:63877739-63877758 None:intergenic 35.0%
! TGATTAGTTGTATAGGGTGA+TGG - chr8_3:63877768-63877787 Msa1301720:intron 35.0%
! TCAAATACTCCAGTTTCTAG+TGG - chr8_3:63878069-63878088 Msa1301720:intron 35.0%
TTTATGCTTCCACTAGAAAC+TGG + chr8_3:63878081-63878100 None:intergenic 35.0%
TAAACAATCCTTTGGTTGCA+TGG + chr8_3:63878167-63878186 None:intergenic 35.0%
!! CTTTAAAACGTATGAGGTCT+AGG - chr8_3:63878265-63878284 Msa1301720:intron 35.0%
TACAAAGAGGCAAAATCTGA+GGG + chr8_3:63878873-63878892 None:intergenic 35.0%
ATACAAAGAGGCAAAATCTG+AGG + chr8_3:63878874-63878893 None:intergenic 35.0%
ATTATGAGCAGGTGTATCTT+CGG - chr8_3:63878989-63879008 Msa1301720:intron 35.0%
TTGAAGCATGAACTCAAACA+AGG - chr8_3:63879179-63879198 Msa1301720:intron 35.0%
TGAACTCAAACAAGGTTACA+AGG - chr8_3:63879187-63879206 Msa1301720:intron 35.0%
TCAATCAAAGGAAAAGGAAC+TGG - chr8_3:63879504-63879523 Msa1301720:intron 35.0%
TAATGGAATACGGATGTAGA+AGG - chr8_3:63879852-63879871 Msa1301720:CDS 35.0%
AATGGAATACGGATGTAGAA+GGG - chr8_3:63879853-63879872 Msa1301720:CDS 35.0%
!!! GCAGCAACCTCATATTTTTT+TGG + chr8_3:63879970-63879989 None:intergenic 35.0%
! TGCTGCTTGATATCTGATAT+CGG - chr8_3:63879984-63880003 Msa1301720:five_prime_UTR 35.0%
ATATCTGATATCGGAGGATA+AGG - chr8_3:63879993-63880012 Msa1301720:five_prime_UTR 35.0%
!! AATAGGGAATTTTGAGGGAG+TGG + chr8_3:63874660-63874679 None:intergenic 40.0%
! GTGAACTGGAAACACTTTTG+AGG + chr8_3:63874706-63874725 None:intergenic 40.0%
!! GCTGGAAAGCTATTTCTTGT+TGG + chr8_3:63874758-63874777 None:intergenic 40.0%
TCATGCAAATGGAACCAGAA+AGG - chr8_3:63874859-63874878 Msa1301720:three_prime_UTR 40.0%
!!! ATGCTTTTTTCCCTCCTTTC+TGG + chr8_3:63874876-63874895 None:intergenic 40.0%
AGAAAGGAGGGAAAAAAGCA+TGG - chr8_3:63874875-63874894 Msa1301720:three_prime_UTR 40.0%
CATAAAGTGATCAAGCTCCT+TGG + chr8_3:63875123-63875142 None:intergenic 40.0%
CAAGGAGCTTGATCACTTTA+TGG - chr8_3:63875121-63875140 Msa1301720:intron 40.0%
!! AGTGTCTTAATTTGCCTCAC+TGG - chr8_3:63875362-63875381 Msa1301720:intron 40.0%
TGCGAAGACATCAACATGTA+GGG - chr8_3:63875685-63875704 Msa1301720:CDS 40.0%
! CCCTAATTTTGTGGAGCTTA+AGG - chr8_3:63875929-63875948 Msa1301720:intron 40.0%
! ATCAGATTTGTCTTGGTGTG+TGG - chr8_3:63876147-63876166 Msa1301720:intron 40.0%
! GTGTGGCTAGTTCCAATTTA+AGG - chr8_3:63876164-63876183 Msa1301720:intron 40.0%
GAACACACACCTAAACAAGT+GGG + chr8_3:63876289-63876308 None:intergenic 40.0%
AGAACACACACCTAAACAAG+TGG + chr8_3:63876290-63876309 None:intergenic 40.0%
TCAAAATCTGATCCCCATGA+AGG + chr8_3:63876337-63876356 None:intergenic 40.0%
CCCATCATTGTACATTTCTG+TGG - chr8_3:63876416-63876435 Msa1301720:intron 40.0%
!! CGTACATCTTGGTATTGATG+TGG - chr8_3:63876467-63876486 Msa1301720:intron 40.0%
! ACTTCGAGGTGAAGTTTGTT+AGG - chr8_3:63876944-63876963 Msa1301720:intron 40.0%
TGGTTGCTCATACTTTAGCT+AGG - chr8_3:63876980-63876999 Msa1301720:intron 40.0%
TGCTCATACTTTAGCTAGGA+CGG - chr8_3:63876984-63877003 Msa1301720:intron 40.0%
TTTATTGAGGCACACTTGGT+TGG + chr8_3:63877456-63877475 None:intergenic 40.0%
TGTGTTTATTGAGGCACACT+TGG + chr8_3:63877460-63877479 None:intergenic 40.0%
CGTAAAGACTGCATTTGTCA+AGG + chr8_3:63877740-63877759 None:intergenic 40.0%
TCACATTCTCTTCACCATGA+TGG + chr8_3:63877963-63877982 None:intergenic 40.0%
!! GGAGCTCTTTAAAACGTATG+AGG - chr8_3:63878259-63878278 Msa1301720:intron 40.0%
ACAAAGAGGCAAAATCTGAG+GGG + chr8_3:63878872-63878891 None:intergenic 40.0%
TATGGTGCATCATTATGAGC+AGG - chr8_3:63878978-63878997 Msa1301720:intron 40.0%
TTATGAGCAGGTGTATCTTC+GGG - chr8_3:63878990-63879009 Msa1301720:intron 40.0%
AACGCTAGGTTATACAACGA+AGG - chr8_3:63879065-63879084 Msa1301720:intron 40.0%
AAAGACCTTTCAGTCTCTGT+GGG + chr8_3:63879137-63879156 None:intergenic 40.0%
AGAGACTGAAAGGTCTTTGA+TGG - chr8_3:63879139-63879158 Msa1301720:intron 40.0%
ATTCTACGAAAGAGAAGAGC+TGG - chr8_3:63879236-63879255 Msa1301720:intron 40.0%
TTCTACGAAAGAGAAGAGCT+GGG - chr8_3:63879237-63879256 Msa1301720:intron 40.0%
TTGCCACCAAGCTTTCAAAA+GGG + chr8_3:63879285-63879304 None:intergenic 40.0%
ATTGCCACCAAGCTTTCAAA+AGG + chr8_3:63879286-63879305 None:intergenic 40.0%
GGTGGCAATCACATTCTAAA+TGG - chr8_3:63879297-63879316 Msa1301720:intron 40.0%
!!! TTTTGGAGCTACTAGAGGAT+GGG + chr8_3:63879541-63879560 None:intergenic 40.0%
ATGGAATACGGATGTAGAAG+GGG - chr8_3:63879854-63879873 Msa1301720:CDS 40.0%
TGCTTGATATCTGATATCGG+AGG - chr8_3:63879987-63880006 Msa1301720:five_prime_UTR 40.0%
AGAAAATTCGACGGTGGGAT+TGG + chr8_3:63874550-63874569 None:intergenic 45.0%
ATGGGAGAAAATTCGACGGT+GGG + chr8_3:63874555-63874574 None:intergenic 45.0%
AATGGGAGAAAATTCGACGG+TGG + chr8_3:63874556-63874575 None:intergenic 45.0%
CTTCTTCTTCTGTGAAACGC+TGG + chr8_3:63874776-63874795 None:intergenic 45.0%
!! AAGATGAAGAAAGGGCATCC+TGG - chr8_3:63874793-63874812 Msa1301720:three_prime_UTR 45.0%
TGCAAATGGAACCAGAAAGG+AGG - chr8_3:63874862-63874881 Msa1301720:three_prime_UTR 45.0%
GCAAATGGAACCAGAAAGGA+GGG - chr8_3:63874863-63874882 Msa1301720:three_prime_UTR 45.0%
! GGAGGGAAAAAAGCATGGAT+CGG - chr8_3:63874880-63874899 Msa1301720:three_prime_UTR 45.0%
ATCCTTGGAAGCTGATCAAC+CGG + chr8_3:63875029-63875048 None:intergenic 45.0%
TGAAGCTGAGCATCAATCCT+TGG + chr8_3:63875044-63875063 None:intergenic 45.0%
GATTGATGCTCAGCTTCAAC+AGG - chr8_3:63875046-63875065 Msa1301720:intron 45.0%
CTGCGAAGACATCAACATGT+AGG - chr8_3:63875684-63875703 Msa1301720:CDS 45.0%
GCGAAGACATCAACATGTAG+GGG - chr8_3:63875686-63875705 Msa1301720:CDS 45.0%
TGTTAGGAGACAAGCGAACA+TGG - chr8_3:63876960-63876979 Msa1301720:intron 45.0%
GGAGGCAGATAAACACATGA+GGG - chr8_3:63877265-63877284 Msa1301720:intron 45.0%
!! GTTGTATAGGGTGATGGAAG+TGG - chr8_3:63877774-63877793 Msa1301720:intron 45.0%
AACGTATGAGGTCTAGGTCT+AGG - chr8_3:63878271-63878290 Msa1301720:intron 45.0%
CAAAGAGGCAAAATCTGAGG+GGG + chr8_3:63878871-63878890 None:intergenic 45.0%
AAGACCTTTCAGTCTCTGTG+GGG + chr8_3:63879136-63879155 None:intergenic 45.0%
CAAAGACCTTTCAGTCTCTG+TGG + chr8_3:63879138-63879157 None:intergenic 45.0%
GGTCTTTGATGGAACGAGTT+AGG - chr8_3:63879150-63879169 Msa1301720:intron 45.0%
CCAAGCTTTCAAAAGGGATG+TGG + chr8_3:63879279-63879298 None:intergenic 45.0%
!! CCACATCCCTTTTGAAAGCT+TGG - chr8_3:63879276-63879295 Msa1301720:intron 45.0%
!! CATCCCTTTTGAAAGCTTGG+TGG - chr8_3:63879279-63879298 Msa1301720:intron 45.0%
GGAGGAAGATAAGGCTAGAT+TGG - chr8_3:63879436-63879455 Msa1301720:intron 45.0%
AGATAAGGCTAGATTGGTGC+AGG - chr8_3:63879442-63879461 Msa1301720:intron 45.0%
! TTTGGAGCTACTAGAGGATG+GGG + chr8_3:63879540-63879559 None:intergenic 45.0%
!!! GTTTTGGAGCTACTAGAGGA+TGG + chr8_3:63879542-63879561 None:intergenic 45.0%
!!! CTTGGTTTTGGAGCTACTAG+AGG + chr8_3:63879546-63879565 None:intergenic 45.0%
! GGTGGGATTGGTGATAACGT+GGG + chr8_3:63874538-63874557 None:intergenic 50.0%
! GCTGTTGTTGTTGTTGTGCC+AGG + chr8_3:63874814-63874833 None:intergenic 50.0%
AAAGCATGGATCGGAACCAC+CGG - chr8_3:63874889-63874908 Msa1301720:three_prime_UTR 50.0%
CGCAATTGTTGTCATTCCGG+TGG + chr8_3:63874908-63874927 None:intergenic 50.0%
GTGTCTCAGAATTGCGACAC+CGG - chr8_3:63875007-63875026 Msa1301720:intron 50.0%
! TTCTGATGGACAGCAGTACG+AGG - chr8_3:63876093-63876112 Msa1301720:intron 50.0%
! GACAGCAGTACGAGGCATTT+GGG - chr8_3:63876101-63876120 Msa1301720:intron 50.0%
TAGCTAGGACGGTCTGTTCT+TGG - chr8_3:63876995-63877014 Msa1301720:intron 50.0%
AGCTAGGACGGTCTGTTCTT+GGG - chr8_3:63876996-63877015 Msa1301720:intron 50.0%
CGGAGGCAGATAAACACATG+AGG - chr8_3:63877264-63877283 Msa1301720:intron 50.0%
ACATGTCCGTGTTCATGCCA+TGG - chr8_3:63877595-63877614 Msa1301720:intron 50.0%
CAGTCTCTGCAAAGCTTGAC+AGG - chr8_3:63877647-63877666 Msa1301720:intron 50.0%
GTATCTTCGGGTGAAGGAAC+AGG - chr8_3:63879002-63879021 Msa1301720:intron 50.0%
GTCAGACGATGAAGATGAGC+AGG - chr8_3:63879034-63879053 Msa1301720:intron 50.0%
AACGAAGGAAGCAGCCTTGA+TGG - chr8_3:63879080-63879099 Msa1301720:intron 50.0%
!! CAAGAGTATCGACGCCATCA+AGG + chr8_3:63879097-63879116 None:intergenic 50.0%
!! CTTGATGGCGTCGATACTCT+TGG - chr8_3:63879095-63879114 Msa1301720:intron 50.0%
TTGTCCCCACAGAGACTGAA+AGG - chr8_3:63879129-63879148 Msa1301720:intron 50.0%
GCTAGATTGGTGCAGGAAAC+AGG - chr8_3:63879449-63879468 Msa1301720:intron 50.0%
! CTACCTCTTGCGCTTGGTTT+TGG + chr8_3:63879558-63879577 None:intergenic 50.0%
ATGGTACTACCTCTTGCGCT+TGG + chr8_3:63879564-63879583 None:intergenic 50.0%
! CGGTGGGATTGGTGATAACG+TGG + chr8_3:63874539-63874558 None:intergenic 55.0%
! CACCGGTTGATCAGCTTCCA+AGG - chr8_3:63875024-63875043 Msa1301720:intron 55.0%
GAAAGCTTGGGAGTCCAGTG+AGG + chr8_3:63875379-63875398 None:intergenic 55.0%
! GGACAGCAGTACGAGGCATT+TGG - chr8_3:63876100-63876119 Msa1301720:intron 55.0%
TGTCCGTGTTCATGCCATGG+AGG - chr8_3:63877598-63877617 Msa1301720:intron 55.0%
CTGCCTCCATGGCATGAACA+CGG + chr8_3:63877604-63877623 None:intergenic 55.0%
TCATGCCATGGAGGCAGTGA+TGG - chr8_3:63877607-63877626 Msa1301720:intron 55.0%
ACAAGCCATCACTGCCTCCA+TGG + chr8_3:63877615-63877634 None:intergenic 55.0%
! TGGAGGCAGTGATGGCTTGT+TGG - chr8_3:63877615-63877634 Msa1301720:intron 55.0%
!! GGAGGCAGTGATGGCTTGTT+GGG - chr8_3:63877616-63877635 Msa1301720:intron 55.0%
GAGGCAAAATCTGAGGGGGT+TGG + chr8_3:63878867-63878886 None:intergenic 55.0%
GCAGGTGTATCTTCGGGTGA+AGG - chr8_3:63878996-63879015 Msa1301720:intron 55.0%
AGCAGGCAGAGAGTAACGCT+AGG - chr8_3:63879051-63879070 Msa1301720:intron 55.0%
TCAGTCTCTGTGGGGACAAG+AGG + chr8_3:63879128-63879147 None:intergenic 55.0%
AGAAGAGCTGGGAAACTCCC+TGG - chr8_3:63879248-63879267 Msa1301720:intron 55.0%
GAAGAGCTGGGAAACTCCCT+GGG - chr8_3:63879249-63879268 Msa1301720:intron 55.0%
AAGAGCTGGGAAACTCCCTG+GGG - chr8_3:63879250-63879269 Msa1301720:intron 55.0%
AAAGGGATGTGGTGTCCCCA+GGG + chr8_3:63879268-63879287 None:intergenic 55.0%
AAAAGGGATGTGGTGTCCCC+AGG + chr8_3:63879269-63879288 None:intergenic 55.0%
GCTCCAAAACCAAGCGCAAG+AGG - chr8_3:63879552-63879571 Msa1301720:intron 55.0%
!! GGCGTCGATACTCTTGGCCT+TGG - chr8_3:63879101-63879120 Msa1301720:intron 60.0%
CTGTGGGGACAAGAGGACCA+AGG + chr8_3:63879121-63879140 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 63874503 63880202 63874503 ID=Msa1301720;Name=Msa1301720
chr8_3 mRNA 63874503 63880202 63874503 ID=Msa1301720-mRNA-1;Parent=Msa1301720;Name=Msa1301720-mRNA-1;_AED=0.09;_eAED=0.09;_QI=232|0.8|0.66|1|0.6|0.33|6|430|318
chr8_3 exon 63874503 63874969 63874503 ID=Msa1301720-mRNA-1:exon:19168;Parent=Msa1301720-mRNA-1
chr8_3 exon 63875132 63875268 63875132 ID=Msa1301720-mRNA-1:exon:19167;Parent=Msa1301720-mRNA-1
chr8_3 exon 63875374 63875504 63875374 ID=Msa1301720-mRNA-1:exon:19166;Parent=Msa1301720-mRNA-1
chr8_3 exon 63875583 63875705 63875583 ID=Msa1301720-mRNA-1:exon:19165;Parent=Msa1301720-mRNA-1
chr8_3 exon 63877037 63877157 63877037 ID=Msa1301720-mRNA-1:exon:19164;Parent=Msa1301720-mRNA-1
chr8_3 exon 63879563 63880202 63879563 ID=Msa1301720-mRNA-1:exon:19163;Parent=Msa1301720-mRNA-1
chr8_3 five_prime_UTR 63879971 63880202 63879971 ID=Msa1301720-mRNA-1:five_prime_utr;Parent=Msa1301720-mRNA-1
chr8_3 CDS 63879563 63879970 63879563 ID=Msa1301720-mRNA-1:cds;Parent=Msa1301720-mRNA-1
chr8_3 CDS 63877037 63877157 63877037 ID=Msa1301720-mRNA-1:cds;Parent=Msa1301720-mRNA-1
chr8_3 CDS 63875583 63875705 63875583 ID=Msa1301720-mRNA-1:cds;Parent=Msa1301720-mRNA-1
chr8_3 CDS 63875374 63875504 63875374 ID=Msa1301720-mRNA-1:cds;Parent=Msa1301720-mRNA-1
chr8_3 CDS 63875132 63875268 63875132 ID=Msa1301720-mRNA-1:cds;Parent=Msa1301720-mRNA-1
chr8_3 CDS 63874933 63874969 63874933 ID=Msa1301720-mRNA-1:cds;Parent=Msa1301720-mRNA-1
chr8_3 three_prime_UTR 63874503 63874932 63874503 ID=Msa1301720-mRNA-1:three_prime_utr;Parent=Msa1301720-mRNA-1
Gene Sequence

>Msa1301720

ATGGCTTTTCACGAGCATCTCCAACAAGAAATAGCTTTCCAGCGTTTCACAGAAGAAGAAGATGAAGAAAGGGCATCCTGGCACAACAACAACAACAGCAGTGTAAACGCACGTCAACAGAATTTCATGCAAATGGAACCAGAAAGGAGGGAAAAAAGCATGGATCGGAACCACCGGAATGACAACAATTGCGAAACGGAAGAATTAAGAGAATACAAAGCAGAGATATTAGGACATCCACTCTATGATCAATTATTATCTGCTCATGTTTCGTGTCTCAGAATTGCGACACCGGTTGATCAGCTTCCAAGGATTGATGCTCAGCTTCAACAGGCACAACGTGTTCTTCAAAAATATTCTTCTGTTGGAATTGGAAATATGGATCCCAAGGAGCTTGATCACTTTATGACACATTATGTTCTTTTGCTTTGTGCCTTCAAAGAACAGTTGCAACAACATGTCCGTGTTCATGCCATGGAGGCAGTGATGGCTTGTTGGGATCTTGAGCAGTCTCTGCAAAGCTTGACAGGTGTATCTTCGGGTGAAGGAACAGGAGCAACAATGTCAGACGATGAAGATGAGCAGGCAGAGAGTAACGCTAGGTTATACAACGAAGGAAGCAGCCTTGATGGCGTCGATACTCTTGGCCTTGGTTACAAGGAGAAGATTGTAGATGTAAGAGAAGAAATTCTACGAAAGAGAAGAGCTGGGAAACTCCCTGGGGACACCACATCCCTTTTGAAAGCTTGGTGGCAATCACATTCTAAATGGCCCTATCCAACTGAGGAAGATAAGGCTAGATTGGTGCAGGAAACAGGCTTGCAATTAAAGCAAATAAATAACTGGTTTATCAATCAAAGGAAAAGGAACTGGCATGCTAACTCCCCATCCTCTAGTAGCTCCAAAACCAAGCGCAAGAGCAGTGCAGGCGATAGCAGTAACCAGAGCTTCATGTGA
Protein sequence

>Msa1301720

MAFHEHLQQEIAFQRFTEEEDEERASWHNNNNSSVNARQQNFMQMEPERREKSMDRNHRNDNNCETEELREYKAEILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQAQRVLQKYSSVGIGNMDPKELDHFMTHYVLLLCAFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSSGEGTGATMSDDEDEQAESNARLYNEGSSLDGVDTLGLGYKEKIVDVREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHANSPSSSSSKTKRKSSAGDSSNQSFM*