Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1297310 | XP_013457515.1 | 98.524 | 271 | 3 | 1 | 1 | 270 | 1 | 271 | 0.0 | 550 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1297310 | sp|P46604|HAT22_ARATH | 61.806 | 288 | 82 | 9 | 1 | 270 | 1 | 278 | 2.57e-90 | 271 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1297310 | A0A072UQB3 | 98.524 | 271 | 3 | 1 | 1 | 270 | 1 | 271 | 0.0 | 550 |
Gene ID | Type | Classification |
---|---|---|
Msa1297310 | TF | HB-HD-ZIP |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006510 | Msa1297310 | 0.812765 | 3.595191e-51 | -8.615850e-47 |
Msa0029850 | Msa1297310 | 0.824774 | 6.726010e-54 | -8.615850e-47 |
Msa0042550 | Msa1297310 | 0.858245 | 9.404937e-63 | -8.615850e-47 |
Msa0055070 | Msa1297310 | 0.840849 | 6.787576e-58 | -8.615850e-47 |
Msa0058270 | Msa1297310 | 0.800191 | 1.618159e-48 | -8.615850e-47 |
Msa0077180 | Msa1297310 | 0.802937 | 4.426857e-49 | -8.615850e-47 |
Msa0084720 | Msa1297310 | 0.810396 | 1.176785e-50 | -8.615850e-47 |
Msa0085720 | Msa1297310 | 0.814446 | 1.534080e-51 | -8.615850e-47 |
Msa0101020 | Msa1297310 | 0.842350 | 2.728534e-58 | -8.615850e-47 |
Msa0613460 | Msa1297310 | 0.814471 | 1.514852e-51 | -8.615850e-47 |
Msa0615340 | Msa1297310 | 0.810131 | 1.342358e-50 | -8.615850e-47 |
Msa0622170 | Msa1297310 | -0.815171 | 1.059887e-51 | -8.615850e-47 |
Msa0622600 | Msa1297310 | 0.818464 | 1.933325e-52 | -8.615850e-47 |
Msa0626990 | Msa1297310 | 0.832555 | 8.843260e-56 | -8.615850e-47 |
Msa0627350 | Msa1297310 | 0.831595 | 1.526848e-55 | -8.615850e-47 |
Msa0653440 | Msa1297310 | 0.843432 | 1.406482e-58 | -8.615850e-47 |
Msa0662570 | Msa1297310 | 0.800308 | 1.531735e-48 | -8.615850e-47 |
Msa0667740 | Msa1297310 | 0.804518 | 2.079019e-49 | -8.615850e-47 |
Msa0679550 | Msa1297310 | 0.822443 | 2.362980e-53 | -8.615850e-47 |
Msa0695870 | Msa1297310 | 0.854321 | 1.330601e-61 | -8.615850e-47 |
Msa0698440 | Msa1297310 | 0.811510 | 6.754372e-51 | -8.615850e-47 |
Msa0698930 | Msa1297310 | 0.807845 | 4.143213e-50 | -8.615850e-47 |
Msa0731180 | Msa1297310 | 0.807939 | 3.956458e-50 | -8.615850e-47 |
Msa0755070 | Msa1297310 | 0.810766 | 9.793121e-51 | -8.615850e-47 |
Msa0773310 | Msa1297310 | 0.843815 | 1.110935e-58 | -8.615850e-47 |
Msa0787580 | Msa1297310 | -0.815274 | 1.005339e-51 | -8.615850e-47 |
Msa0796960 | Msa1297310 | 0.808760 | 2.643909e-50 | -8.615850e-47 |
Msa0800770 | Msa1297310 | 0.831958 | 1.242238e-55 | -8.615850e-47 |
Msa0807030 | Msa1297310 | 0.819077 | 1.403729e-52 | -8.615850e-47 |
Msa0810760 | Msa1297310 | 0.855360 | 6.645490e-62 | -8.615850e-47 |
Msa0818110 | Msa1297310 | 0.834834 | 2.382598e-56 | -8.615850e-47 |
Msa0827470 | Msa1297310 | 0.801268 | 9.756850e-49 | -8.615850e-47 |
Msa0829830 | Msa1297310 | 0.810855 | 9.366029e-51 | -8.615850e-47 |
Msa0831850 | Msa1297310 | 0.808301 | 3.313295e-50 | -8.615850e-47 |
Msa0834440 | Msa1297310 | 0.804270 | 2.341195e-49 | -8.615850e-47 |
Msa0838930 | Msa1297310 | 0.829907 | 3.957463e-55 | -8.615850e-47 |
Msa0124550 | Msa1297310 | 0.811178 | 7.970503e-51 | -8.615850e-47 |
Msa0142280 | Msa1297310 | 0.814712 | 1.339827e-51 | -8.615850e-47 |
Msa0145110 | Msa1297310 | 0.822074 | 2.877368e-53 | -8.615850e-47 |
Msa0169820 | Msa1297310 | 0.837284 | 5.690385e-57 | -8.615850e-47 |
Msa0175050 | Msa1297310 | 0.828012 | 1.138819e-54 | -8.615850e-47 |
Msa0178510 | Msa1297310 | 0.852562 | 4.256486e-61 | -8.615850e-47 |
Msa0183010 | Msa1297310 | -0.808176 | 3.522346e-50 | -8.615850e-47 |
Msa0187830 | Msa1297310 | 0.855955 | 4.457710e-62 | -8.615850e-47 |
Msa0188050 | Msa1297310 | 0.825446 | 4.667529e-54 | -8.615850e-47 |
Msa0190530 | Msa1297310 | 0.825545 | 4.420855e-54 | -8.615850e-47 |
Msa0193540 | Msa1297310 | 0.805428 | 1.341497e-49 | -8.615850e-47 |
Msa0194010 | Msa1297310 | 0.807260 | 5.512734e-50 | -8.615850e-47 |
Msa0229590 | Msa1297310 | 0.815597 | 8.521688e-52 | -8.615850e-47 |
Msa0230640 | Msa1297310 | -0.800656 | 1.301236e-48 | -8.615850e-47 |
Msa0232720 | Msa1297310 | 0.804886 | 1.741673e-49 | -8.615850e-47 |
Msa0235880 | Msa1297310 | 0.816338 | 5.821100e-52 | -8.615850e-47 |
Msa1229610 | Msa1297310 | 0.821883 | 3.186700e-53 | -8.615850e-47 |
Msa1235400 | Msa1297310 | 0.811692 | 6.164290e-51 | -8.615850e-47 |
Msa1236730 | Msa1297310 | 0.811444 | 6.978868e-51 | -8.615850e-47 |
Msa1243100 | Msa1297310 | 0.803678 | 3.107966e-49 | -8.615850e-47 |
Msa1244930 | Msa1297310 | 0.807723 | 4.396851e-50 | -8.615850e-47 |
Msa1250310 | Msa1297310 | 0.910485 | 1.776592e-82 | -8.615850e-47 |
Msa1255060 | Msa1297310 | 0.815983 | 6.988310e-52 | -8.615850e-47 |
Msa1256410 | Msa1297310 | 0.804537 | 2.059822e-49 | -8.615850e-47 |
Msa1262990 | Msa1297310 | -0.815496 | 8.973350e-52 | -8.615850e-47 |
Msa1264860 | Msa1297310 | -0.810889 | 9.209764e-51 | -8.615850e-47 |
Msa1272320 | Msa1297310 | 0.810444 | 1.149120e-50 | -8.615850e-47 |
Msa1288450 | Msa1297310 | 0.806479 | 8.062097e-50 | -8.615850e-47 |
Msa1295510 | Msa1297310 | 0.804181 | 2.443643e-49 | -8.615850e-47 |
Msa1297310 | Msa1301720 | 0.828563 | 8.387759e-55 | -8.615850e-47 |
Msa1297310 | Msa1304890 | -0.816252 | 6.087523e-52 | -8.615850e-47 |
Msa1297310 | Msa1310220 | 0.831569 | 1.549718e-55 | -8.615850e-47 |
Msa1297310 | Msa1311340 | 0.824380 | 8.328836e-54 | -8.615850e-47 |
Msa1297310 | Msa1314770 | 0.815754 | 7.861471e-52 | -8.615850e-47 |
Msa1297310 | Msa1322200 | 0.800330 | 1.515798e-48 | -8.615850e-47 |
Msa1297310 | Msa1335230 | 0.806307 | 8.766538e-50 | -8.615850e-47 |
Msa1297310 | Msa1343250 | 0.839046 | 2.002192e-57 | -8.615850e-47 |
Msa1297310 | Msa1352540 | -0.822155 | 2.756180e-53 | -8.615850e-47 |
Msa1297310 | Msa1360240 | 0.801627 | 8.236621e-49 | -8.615850e-47 |
Msa1297310 | Msa1372150 | 0.849239 | 3.672947e-60 | -8.615850e-47 |
Msa1297310 | Msa1376930 | 0.838781 | 2.345519e-57 | -8.615850e-47 |
Msa1297310 | Msa1385020 | 0.999280 | 2.388783e-300 | -8.615850e-47 |
Msa1297310 | Msa1394310 | 0.802383 | 5.759736e-49 | -8.615850e-47 |
Msa1297310 | Msa1407650 | 0.809113 | 2.221574e-50 | -8.615850e-47 |
Msa1297310 | Msa1408180 | 0.816643 | 4.974603e-52 | -8.615850e-47 |
Msa1297310 | Msa1408340 | 0.806029 | 1.003021e-49 | -8.615850e-47 |
Msa1297310 | Msa1423820 | 0.820991 | 5.117499e-53 | -8.615850e-47 |
Msa1297310 | Msa1424630 | 0.854732 | 1.012001e-61 | -8.615850e-47 |
Msa1297310 | Msa1433440 | 0.805460 | 1.320784e-49 | -8.615850e-47 |
Msa1297310 | Msa1435400 | 0.801351 | 9.381552e-49 | -8.615850e-47 |
Msa1297310 | Msa1440940 | 0.811845 | 5.711094e-51 | -8.615850e-47 |
Msa1297310 | Msa1448980 | 0.817206 | 3.719191e-52 | -8.615850e-47 |
Msa1297310 | Msa1458510 | 0.839652 | 1.393855e-57 | -8.615850e-47 |
Msa0388030 | Msa1297310 | -0.806316 | 8.729038e-50 | -8.615850e-47 |
Msa0422180 | Msa1297310 | 0.830943 | 2.208735e-55 | -8.615850e-47 |
Msa0429090 | Msa1297310 | 0.823825 | 1.124551e-53 | -8.615850e-47 |
Msa0466010 | Msa1297310 | 0.804648 | 1.952791e-49 | -8.615850e-47 |
Msa0475500 | Msa1297310 | 0.804673 | 1.929295e-49 | -8.615850e-47 |
Msa0482180 | Msa1297310 | 0.801457 | 8.924916e-49 | -8.615850e-47 |
Msa1021510 | Msa1297310 | 0.815498 | 8.962954e-52 | -8.615850e-47 |
Msa1026410 | Msa1297310 | 0.801612 | 8.295617e-49 | -8.615850e-47 |
Msa1026940 | Msa1297310 | 0.811311 | 7.461002e-51 | -8.615850e-47 |
Msa1033780 | Msa1297310 | 0.820473 | 6.732547e-53 | -8.615850e-47 |
Msa1039710 | Msa1297310 | -0.824608 | 7.360939e-54 | -8.615850e-47 |
Msa1050740 | Msa1297310 | 0.803106 | 4.083604e-49 | -8.615850e-47 |
Msa1077340 | Msa1297310 | 0.824095 | 9.715503e-54 | -8.615850e-47 |
Msa1084120 | Msa1297310 | 0.805436 | 1.335958e-49 | -8.615850e-47 |
Msa1098250 | Msa1297310 | 0.813315 | 2.723432e-51 | -8.615850e-47 |
Msa1098270 | Msa1297310 | 0.825134 | 5.532524e-54 | -8.615850e-47 |
Msa1105500 | Msa1297310 | 0.812700 | 3.715838e-51 | -8.615850e-47 |
Msa0239690 | Msa1297310 | 0.823258 | 1.526032e-53 | -8.615850e-47 |
Msa0240270 | Msa1297310 | 0.820358 | 7.154115e-53 | -8.615850e-47 |
Msa0244140 | Msa1297310 | 0.813046 | 3.121029e-51 | -8.615850e-47 |
Msa0244190 | Msa1297310 | 0.810737 | 9.935299e-51 | -8.615850e-47 |
Msa0278900 | Msa1297310 | 0.819134 | 1.361863e-52 | -8.615850e-47 |
Msa0282720 | Msa1297310 | 0.805472 | 1.312906e-49 | -8.615850e-47 |
Msa0284450 | Msa1297310 | 0.800967 | 1.124215e-48 | -8.615850e-47 |
Msa0308460 | Msa1297310 | 0.811524 | 6.707715e-51 | -8.615850e-47 |
Msa0311470 | Msa1297310 | 0.804397 | 2.203179e-49 | -8.615850e-47 |
Msa0314060 | Msa1297310 | 0.801404 | 9.150420e-49 | -8.615850e-47 |
Msa0322680 | Msa1297310 | 0.817689 | 2.895479e-52 | -8.615850e-47 |
Msa0338730 | Msa1297310 | -0.809808 | 1.575541e-50 | -8.615850e-47 |
Msa0342070 | Msa1297310 | 0.879897 | 8.561366e-70 | -8.615850e-47 |
Msa0344690 | Msa1297310 | -0.804667 | 1.935143e-49 | -8.615850e-47 |
Msa1115280 | Msa1297310 | 0.820761 | 5.783152e-53 | -8.615850e-47 |
Msa1116450 | Msa1297310 | 0.800350 | 1.502124e-48 | -8.615850e-47 |
Msa1118760 | Msa1297310 | 0.831536 | 1.578771e-55 | -8.615850e-47 |
Msa1138280 | Msa1297310 | 0.826395 | 2.778056e-54 | -8.615850e-47 |
Msa1143020 | Msa1297310 | 0.830602 | 2.677874e-55 | -8.615850e-47 |
Msa1158660 | Msa1297310 | 0.802268 | 6.081733e-49 | -8.615850e-47 |
Msa1162060 | Msa1297310 | 0.810205 | 1.294181e-50 | -8.615850e-47 |
Msa1174310 | Msa1297310 | 0.804267 | 2.345354e-49 | -8.615850e-47 |
Msa1177780 | Msa1297310 | 0.830046 | 3.660244e-55 | -8.615850e-47 |
Msa1182130 | Msa1297310 | 0.834349 | 3.154531e-56 | -8.615850e-47 |
Msa1202750 | Msa1297310 | 0.804552 | 2.044684e-49 | -8.615850e-47 |
Msa1204440 | Msa1297310 | 0.806255 | 8.987725e-50 | -8.615850e-47 |
Msa1205390 | Msa1297310 | 0.970841 | 3.108148e-132 | -8.615850e-47 |
Msa1222280 | Msa1297310 | 0.824822 | 6.553480e-54 | -8.615850e-47 |
Msa1224200 | Msa1297310 | 0.806890 | 6.603383e-50 | -8.615850e-47 |
Msa0485490 | Msa1297310 | 0.839926 | 1.183211e-57 | -8.615850e-47 |
Msa0525610 | Msa1297310 | 0.843358 | 1.471982e-58 | -8.615850e-47 |
Msa0526070 | Msa1297310 | -0.825189 | 5.369508e-54 | -8.615850e-47 |
Msa0526100 | Msa1297310 | -0.809932 | 1.482079e-50 | -8.615850e-47 |
Msa0530650 | Msa1297310 | 0.835608 | 1.519813e-56 | -8.615850e-47 |
Msa0557410 | Msa1297310 | 0.802631 | 5.120149e-49 | -8.615850e-47 |
Msa0559500 | Msa1297310 | 0.801031 | 1.090937e-48 | -8.615850e-47 |
Msa0572480 | Msa1297310 | 0.804734 | 1.874037e-49 | -8.615850e-47 |
Msa0574850 | Msa1297310 | 0.817933 | 2.550153e-52 | -8.615850e-47 |
Msa0587190 | Msa1297310 | 0.831035 | 2.096679e-55 | -8.615850e-47 |
Msa0847880 | Msa1297310 | 0.802600 | 5.194186e-49 | -8.615850e-47 |
Msa0870060 | Msa1297310 | 0.824834 | 6.510615e-54 | -8.615850e-47 |
Msa0874630 | Msa1297310 | 0.883818 | 3.251514e-71 | -8.615850e-47 |
Msa0876360 | Msa1297310 | 0.813684 | 2.259703e-51 | -8.615850e-47 |
Msa0881160 | Msa1297310 | 0.817041 | 4.049967e-52 | -8.615850e-47 |
Msa0925870 | Msa1297310 | 0.825123 | 5.564332e-54 | -8.615850e-47 |
Msa0935770 | Msa1297310 | 0.834373 | 3.112703e-56 | -8.615850e-47 |
Msa0968150 | Msa1297310 | 0.817075 | 3.979337e-52 | -8.615850e-47 |
Msa0972810 | Msa1297310 | 0.810936 | 8.997128e-51 | -8.615850e-47 |
Msa0976290 | Msa1297310 | 0.847101 | 1.431107e-59 | -8.615850e-47 |
Msa0978700 | Msa1297310 | 0.810436 | 1.153941e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1297310 | MtrunA17_Chr4g0054421 | 98.524 | 271 | 3 | 1 | 1 | 270 | 1 | 271 | 0.0 | 550 |
Msa1297310 | MtrunA17_Chr5g0400781 | 63.860 | 285 | 73 | 8 | 1 | 270 | 1 | 270 | 1.00e-102 | 300 |
Msa1297310 | MtrunA17_Chr1g0175651 | 62.963 | 189 | 48 | 4 | 68 | 255 | 116 | 283 | 2.86e-72 | 223 |
Msa1297310 | MtrunA17_Chr2g0308611 | 76.119 | 134 | 31 | 1 | 108 | 240 | 180 | 313 | 1.41e-67 | 213 |
Msa1297310 | MtrunA17_Chr7g0258831 | 76.984 | 126 | 27 | 1 | 115 | 240 | 150 | 273 | 8.49e-66 | 207 |
Msa1297310 | MtrunA17_Chr5g0399491 | 68.293 | 164 | 42 | 4 | 79 | 240 | 95 | 250 | 2.27e-65 | 206 |
Msa1297310 | MtrunA17_Chr1g0151971 | 45.847 | 301 | 114 | 9 | 5 | 270 | 2 | 288 | 6.10e-65 | 204 |
Msa1297310 | MtrunA17_Chr4g0055851 | 66.667 | 162 | 41 | 2 | 80 | 240 | 85 | 234 | 7.91e-65 | 204 |
Msa1297310 | MtrunA17_Chr8g0335131 | 82.456 | 114 | 19 | 1 | 126 | 238 | 145 | 258 | 6.04e-62 | 197 |
Msa1297310 | MtrunA17_Chr3g0135331 | 54.124 | 194 | 64 | 6 | 90 | 268 | 117 | 300 | 5.65e-50 | 166 |
Msa1297310 | MtrunA17_Chr4g0044091 | 63.866 | 119 | 37 | 1 | 126 | 238 | 64 | 182 | 8.02e-49 | 160 |
Msa1297310 | MtrunA17_Chr2g0299031 | 44.211 | 190 | 93 | 4 | 54 | 239 | 15 | 195 | 1.08e-39 | 137 |
Msa1297310 | MtrunA17_Chr4g0071411 | 59.649 | 114 | 42 | 2 | 129 | 238 | 90 | 203 | 3.06e-35 | 125 |
Msa1297310 | MtrunA17_Chr5g0416391 | 47.664 | 107 | 54 | 1 | 114 | 218 | 62 | 168 | 3.38e-21 | 90.5 |
Msa1297310 | MtrunA17_Chr7g0265521 | 42.991 | 107 | 61 | 0 | 108 | 214 | 44 | 150 | 1.33e-20 | 87.8 |
Msa1297310 | MtrunA17_Chr3g0119291 | 35.417 | 192 | 112 | 5 | 80 | 261 | 12 | 201 | 2.78e-20 | 87.4 |
Msa1297310 | MtrunA17_Chr8g0362151 | 42.735 | 117 | 64 | 1 | 102 | 218 | 55 | 168 | 8.95e-20 | 86.7 |
Msa1297310 | MtrunA17_Chr7g0217111 | 46.602 | 103 | 51 | 1 | 118 | 216 | 71 | 173 | 4.08e-19 | 84.3 |
Msa1297310 | MtrunA17_Chr6g0450991 | 50.000 | 88 | 44 | 0 | 127 | 214 | 67 | 154 | 5.83e-19 | 84.3 |
Msa1297310 | MtrunA17_Chr4g0060031 | 45.455 | 99 | 54 | 0 | 116 | 214 | 84 | 182 | 1.99e-17 | 80.9 |
Msa1297310 | MtrunA17_Chr8g0381741 | 47.170 | 106 | 47 | 2 | 118 | 214 | 43 | 148 | 2.59e-17 | 80.1 |
Msa1297310 | MtrunA17_Chr3g0123691 | 37.975 | 158 | 85 | 5 | 119 | 265 | 52 | 207 | 2.86e-17 | 79.7 |
Msa1297310 | MtrunA17_Chr1g0179581 | 48.193 | 83 | 43 | 0 | 127 | 209 | 28 | 110 | 3.12e-17 | 75.5 |
Msa1297310 | MtrunA17_Chr6g0453021 | 45.192 | 104 | 49 | 2 | 118 | 213 | 86 | 189 | 6.64e-17 | 78.6 |
Msa1297310 | MtrunA17_Chr5g0415941 | 40.000 | 135 | 65 | 3 | 87 | 213 | 54 | 180 | 7.56e-17 | 79.0 |
Msa1297310 | MtrunA17_Chr8g0362751 | 46.809 | 94 | 43 | 1 | 127 | 213 | 89 | 182 | 5.92e-16 | 75.9 |
Msa1297310 | MtrunA17_Chr5g0403701 | 43.689 | 103 | 53 | 1 | 119 | 221 | 45 | 142 | 8.47e-13 | 65.9 |
Msa1297310 | MtrunA17_Chr5g0403691 | 42.857 | 105 | 58 | 1 | 119 | 221 | 45 | 149 | 9.16e-13 | 65.9 |
Msa1297310 | MtrunA17_Chr3g0127511 | 43.011 | 93 | 46 | 1 | 130 | 215 | 41 | 133 | 2.62e-12 | 65.1 |
Msa1297310 | MtrunA17_Chr8g0346251 | 42.683 | 82 | 47 | 0 | 131 | 212 | 45 | 126 | 1.85e-11 | 62.8 |
Msa1297310 | MtrunA17_Chr5g0410711 | 35.849 | 106 | 68 | 0 | 118 | 223 | 83 | 188 | 3.85e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1297310 | AT4G37790.1 | 61.806 | 288 | 82 | 9 | 1 | 270 | 1 | 278 | 2.61e-91 | 271 |
Msa1297310 | AT2G22800.1 | 58.163 | 294 | 79 | 11 | 1 | 270 | 1 | 274 | 2.63e-83 | 251 |
Msa1297310 | AT5G06710.1 | 61.376 | 189 | 56 | 4 | 76 | 254 | 136 | 317 | 4.99e-70 | 219 |
Msa1297310 | AT5G47370.1 | 57.789 | 199 | 74 | 4 | 72 | 264 | 70 | 264 | 1.75e-66 | 208 |
Msa1297310 | AT3G60390.1 | 60.656 | 183 | 57 | 6 | 69 | 238 | 94 | 274 | 1.22e-62 | 199 |
Msa1297310 | AT4G17460.1 | 60.221 | 181 | 64 | 5 | 68 | 241 | 71 | 250 | 4.76e-62 | 197 |
Msa1297310 | AT4G16780.1 | 75.194 | 129 | 30 | 2 | 112 | 239 | 115 | 242 | 2.00e-61 | 196 |
Msa1297310 | AT2G44910.1 | 79.130 | 115 | 23 | 1 | 126 | 239 | 162 | 276 | 7.21e-59 | 190 |
Msa1297310 | AT2G01430.1 | 54.676 | 139 | 56 | 2 | 106 | 239 | 113 | 249 | 2.42e-44 | 151 |
Msa1297310 | AT1G70920.2 | 52.941 | 136 | 57 | 1 | 114 | 249 | 26 | 154 | 1.03e-40 | 139 |
Msa1297310 | AT1G70920.1 | 56.349 | 126 | 48 | 1 | 114 | 239 | 56 | 174 | 1.19e-40 | 140 |
Msa1297310 | AT5G06710.4 | 59.292 | 113 | 29 | 4 | 76 | 178 | 136 | 241 | 5.02e-30 | 114 |
Msa1297310 | AT2G01430.2 | 50.526 | 95 | 40 | 2 | 106 | 195 | 113 | 205 | 1.12e-22 | 93.2 |
Msa1297310 | AT1G69780.1 | 46.465 | 99 | 53 | 0 | 116 | 214 | 74 | 172 | 7.54e-20 | 87.4 |
Msa1297310 | AT1G26960.1 | 41.964 | 112 | 65 | 0 | 119 | 230 | 63 | 174 | 2.21e-19 | 85.1 |
Msa1297310 | AT5G03790.1 | 35.374 | 147 | 79 | 2 | 127 | 257 | 77 | 223 | 3.75e-18 | 81.6 |
Msa1297310 | AT5G65310.1 | 45.000 | 100 | 48 | 1 | 122 | 214 | 67 | 166 | 1.60e-16 | 78.2 |
Msa1297310 | AT3G01470.1 | 45.161 | 93 | 44 | 1 | 127 | 212 | 68 | 160 | 1.81e-16 | 77.4 |
Msa1297310 | AT5G65310.2 | 45.000 | 100 | 48 | 1 | 122 | 214 | 49 | 148 | 1.98e-16 | 77.8 |
Msa1297310 | AT2G18550.1 | 44.000 | 100 | 56 | 0 | 114 | 213 | 48 | 147 | 8.11e-16 | 74.7 |
Msa1297310 | AT5G03790.2 | 47.253 | 91 | 48 | 0 | 127 | 217 | 77 | 167 | 9.71e-16 | 73.9 |
Msa1297310 | AT5G15150.1 | 42.478 | 113 | 56 | 3 | 113 | 216 | 96 | 208 | 1.32e-15 | 75.9 |
Msa1297310 | AT4G36740.2 | 44.681 | 94 | 52 | 0 | 120 | 213 | 49 | 142 | 2.40e-15 | 73.6 |
Msa1297310 | AT4G36740.1 | 44.681 | 94 | 52 | 0 | 120 | 213 | 48 | 141 | 2.44e-15 | 73.6 |
Msa1297310 | AT4G40060.1 | 44.330 | 97 | 47 | 1 | 125 | 214 | 57 | 153 | 2.55e-15 | 74.7 |
Msa1297310 | AT3G01220.1 | 43.269 | 104 | 53 | 2 | 119 | 216 | 77 | 180 | 2.91e-15 | 74.3 |
Msa1297310 | AT1G27045.4 | 46.875 | 96 | 44 | 1 | 127 | 215 | 68 | 163 | 4.78e-15 | 73.2 |
Msa1297310 | AT1G27045.1 | 40.909 | 132 | 62 | 3 | 127 | 250 | 68 | 191 | 5.93e-15 | 72.4 |
Msa1297310 | AT1G27045.2 | 57.576 | 66 | 28 | 0 | 127 | 192 | 17 | 82 | 8.87e-15 | 70.9 |
Msa1297310 | AT1G27045.5 | 57.576 | 66 | 28 | 0 | 127 | 192 | 25 | 90 | 9.67e-15 | 71.2 |
Msa1297310 | AT1G27045.3 | 57.576 | 66 | 28 | 0 | 127 | 192 | 25 | 90 | 9.67e-15 | 71.2 |
Msa1297310 | AT2G36610.1 | 40.816 | 98 | 50 | 1 | 126 | 215 | 70 | 167 | 3.41e-14 | 69.7 |
Msa1297310 | AT2G22430.1 | 43.750 | 96 | 50 | 1 | 125 | 216 | 60 | 155 | 7.56e-14 | 70.5 |
Msa1297310 | AT2G46680.1 | 43.011 | 93 | 49 | 1 | 130 | 218 | 35 | 127 | 1.56e-13 | 68.9 |
Msa1297310 | AT2G46680.2 | 41.111 | 90 | 53 | 0 | 130 | 219 | 35 | 124 | 1.57e-13 | 68.9 |
Msa1297310 | AT5G06710.2 | 51.163 | 86 | 25 | 4 | 76 | 151 | 136 | 214 | 4.12e-12 | 64.7 |
Msa1297310 | AT5G06710.3 | 51.163 | 86 | 25 | 4 | 76 | 151 | 136 | 214 | 4.12e-12 | 64.7 |
Msa1297310 | AT3G61890.1 | 38.947 | 95 | 44 | 1 | 130 | 210 | 33 | 127 | 2.74e-11 | 62.4 |
Msa1297310 | AT5G66700.1 | 44.872 | 78 | 43 | 0 | 115 | 192 | 59 | 136 | 6.59e-11 | 61.2 |
Msa1297310 | AT1G79840.1 | 43.373 | 83 | 46 | 1 | 126 | 207 | 102 | 184 | 9.84e-11 | 62.4 |
Find 74 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTAGAGAAATTGCTCTTAT+TGG | 0.187884 | 8_3:-57404328 | None:intergenic |
CTAGGTGGTGGTGGTGTTAA+TGG | 0.243245 | 8_3:+57404297 | Msa1297310:CDS |
TCAGGCCTTCAACTTATTCT+AGG | 0.257483 | 8_3:+57403111 | Msa1297310:CDS |
ATGTTTCACAACATTTCTTT+AGG | 0.284664 | 8_3:-57404152 | None:intergenic |
GGTACCTGGCTCTACGGTTC+TGG | 0.298360 | 8_3:-57403691 | None:intergenic |
AGAGAGAGAGATTGGTAATA+AGG | 0.313031 | 8_3:-57403043 | None:intergenic |
TTATGATTACTTGAGGAATA+AGG | 0.345806 | 8_3:-57403192 | None:intergenic |
AAGCATAGCAGATTGATCTT+TGG | 0.351274 | 8_3:-57403472 | None:intergenic |
GGATGGTGGTGTGTCTTGTT+TGG | 0.360529 | 8_3:-57403151 | None:intergenic |
TCTCTCTTGAGTTATCTTGA+TGG | 0.382425 | 8_3:+57403059 | Msa1297310:exon |
CTCTCTTGAGTTATCTTGAT+GGG | 0.399406 | 8_3:+57403060 | Msa1297310:exon |
TGTGAACTATGAAAGGGTTA+AGG | 0.429954 | 8_3:+57404490 | Msa1297310:three_prime_UTR |
ATAACTCAAGAGAGAGAGAT+TGG | 0.433571 | 8_3:-57403051 | None:intergenic |
TGTTAGCAGTGAATTAGAAA+TGG | 0.445208 | 8_3:+57403362 | Msa1297310:CDS |
CACATGAAGGACACATAGTA+AGG | 0.448920 | 8_3:-57404269 | None:intergenic |
AAGAGAAGAGAAGAAAGGTA+AGG | 0.451793 | 8_3:-57402995 | None:intergenic |
AGGCTTTGTAACGTTGTTGT+TGG | 0.454137 | 8_3:-57403172 | None:intergenic |
AATTTACAAACATAGAATAT+AGG | 0.457840 | 8_3:-57404585 | None:intergenic |
GTGAACTATGAAAGGGTTAA+GGG | 0.460344 | 8_3:+57404491 | Msa1297310:three_prime_UTR |
AAACATTAACAGAAGAGAAT+AGG | 0.467293 | 8_3:+57404169 | Msa1297310:CDS |
AAGAAAGGTAAGGGAAGAGT+GGG | 0.469487 | 8_3:-57402985 | None:intergenic |
GCTGAACCATCTTTAACGTT+GGG | 0.469771 | 8_3:+57403225 | Msa1297310:CDS |
AAAGGAGGTGCAAGAATTGA+AGG | 0.482533 | 8_3:+57404200 | Msa1297310:CDS |
AGCTGAACCATCTTTAACGT+TGG | 0.482898 | 8_3:+57403224 | Msa1297310:CDS |
CTAAGCCTAGAATAAGTTGA+AGG | 0.488952 | 8_3:-57403116 | None:intergenic |
GAAGAAAGGTAAGGGAAGAG+TGG | 0.493787 | 8_3:-57402986 | None:intergenic |
TTGTTTCATCTTTCTCTAGT+GGG | 0.496061 | 8_3:+57403319 | Msa1297310:CDS |
AAATGTATGTGAACTATGAA+AGG | 0.497564 | 8_3:+57404483 | Msa1297310:three_prime_UTR |
TTCTTCATAGTAACTCTTGG+TGG | 0.498912 | 8_3:-57403253 | None:intergenic |
AGGTGTTAGATTTAACTCTC+TGG | 0.498987 | 8_3:-57403648 | None:intergenic |
TTCATCTTTCTCTAGTGGGA+GGG | 0.505690 | 8_3:+57403323 | Msa1297310:CDS |
CACCTCGACAAGTTGAGGTC+TGG | 0.514656 | 8_3:+57403666 | Msa1297310:CDS |
GTAAGGGTAGCTGCTGGCAT+AGG | 0.516800 | 8_3:-57404252 | None:intergenic |
GTTGTTTCATCTTTCTCTAG+TGG | 0.516924 | 8_3:+57403318 | Msa1297310:CDS |
AGGTTCTTCATAGTAACTCT+TGG | 0.520099 | 8_3:-57403256 | None:intergenic |
AAGGGAAGAGAAGAGAAGAA+AGG | 0.520574 | 8_3:-57403000 | None:intergenic |
GGTTCCAGAACCGTAGAGCC+AGG | 0.526669 | 8_3:+57403687 | Msa1297310:CDS |
AATGTATGTGAACTATGAAA+GGG | 0.527889 | 8_3:+57404484 | Msa1297310:three_prime_UTR |
TTTCATCTTTCTCTAGTGGG+AGG | 0.528407 | 8_3:+57403322 | Msa1297310:CDS |
AGAGAAGAGAAGAAAGGTAA+GGG | 0.528734 | 8_3:-57402994 | None:intergenic |
GTGAAGGGGTTGTAAAAGTG+AGG | 0.536068 | 8_3:-57404351 | None:intergenic |
TTTGTAACGTTGTTGTTGGA+TGG | 0.545023 | 8_3:-57403168 | None:intergenic |
GATAAACCCAACGTTAAAGA+TGG | 0.545369 | 8_3:-57403231 | None:intergenic |
TGTTTAGGTACCTGGCTCTA+CGG | 0.545452 | 8_3:-57403697 | None:intergenic |
AGAGAATAGGAGGCTACAAA+AGG | 0.550932 | 8_3:+57404182 | Msa1297310:CDS |
GTAAACATGGATCTATATGA+AGG | 0.551801 | 8_3:+57404614 | Msa1297310:three_prime_UTR |
AGAAATGGAAACGACGGAGA+TGG | 0.553541 | 8_3:+57403377 | Msa1297310:CDS |
TGCTGGCATAGGCATATACA+AGG | 0.554332 | 8_3:-57404241 | None:intergenic |
AAAGCTGAAGCAAACAGAAG+TGG | 0.566126 | 8_3:+57404119 | Msa1297310:CDS |
GTAAATTACTATAGTAAACA+TGG | 0.567162 | 8_3:+57404601 | Msa1297310:three_prime_UTR |
TGTGAGAGACTAGGTGGTGG+TGG | 0.571619 | 8_3:+57404288 | Msa1297310:CDS |
TCTAACACCTCGACAAGTTG+AGG | 0.578186 | 8_3:+57403661 | Msa1297310:CDS |
CATTAACAGAAGAGAATAGG+AGG | 0.587793 | 8_3:+57404172 | Msa1297310:CDS |
ATAGTTGTTATGATTACTTG+AGG | 0.592747 | 8_3:-57403199 | None:intergenic |
AAGACGGTGCCACTGCAGCT+AGG | 0.595899 | 8_3:+57403433 | Msa1297310:CDS |
CCACCTAGTCTCTCACATGA+AGG | 0.597382 | 8_3:-57404282 | None:intergenic |
AAGCTTCTTCCTAGCTGCAG+TGG | 0.601402 | 8_3:-57403442 | None:intergenic |
CACATAGTAAGGGTAGCTGC+TGG | 0.601478 | 8_3:-57404258 | None:intergenic |
CAAGATGCTAGTAACAACTC+AGG | 0.601537 | 8_3:+57403093 | Msa1297310:CDS |
GTAACGTTGTTGTTGGATGG+TGG | 0.602624 | 8_3:-57403165 | None:intergenic |
GAATAGGAGGCTACAAAAGG+AGG | 0.603538 | 8_3:+57404185 | Msa1297310:CDS |
GGTGGTGGTGGTGTTAATGG+TGG | 0.605462 | 8_3:+57404300 | Msa1297310:CDS |
TGCTGCTGAAGAATTTGTGA+AGG | 0.622725 | 8_3:-57404367 | None:intergenic |
AACCAGACCTCAACTTGTCG+AGG | 0.626268 | 8_3:-57403668 | None:intergenic |
TGAATTAGAAATGGAAACGA+CGG | 0.634393 | 8_3:+57403371 | Msa1297310:CDS |
GCTGCTGAAGAATTTGTGAA+GGG | 0.658168 | 8_3:-57404366 | None:intergenic |
ACATGAAGGACACATAGTAA+GGG | 0.658983 | 8_3:-57404268 | None:intergenic |
CCTTCATGTGAGAGACTAGG+TGG | 0.665742 | 8_3:+57404282 | Msa1297310:CDS |
GATGAAACAACGCTGTGATG+AGG | 0.669037 | 8_3:-57403306 | None:intergenic |
TCATGTGAGAGACTAGGTGG+TGG | 0.669612 | 8_3:+57404285 | Msa1297310:CDS |
ATCAGCGACGAAGATGAAGA+CGG | 0.679700 | 8_3:+57403417 | Msa1297310:CDS |
TGTCCTTCATGTGAGAGACT+AGG | 0.681664 | 8_3:+57404279 | Msa1297310:CDS |
CTGCTGAAGAATTTGTGAAG+GGG | 0.685286 | 8_3:-57404365 | None:intergenic |
GCTGGCATAGGCATATACAA+GGG | 0.757470 | 8_3:-57404240 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATTTGATAAATAAATG+AGG | - | chr8_3:57403594-57403613 | None:intergenic | 10.0% |
!! | TTATGTATATATTTATGTTT+AGG | - | chr8_3:57403715-57403734 | None:intergenic | 10.0% |
!!! | TGTTATATTAACATTATTTT+TGG | + | chr8_3:57404072-57404091 | Msa1297310:intron | 10.0% |
!! | AAAAATTTGATAAATAAATG+AGG | - | chr8_3:57403594-57403613 | None:intergenic | 10.0% |
!! | TTATGTATATATTTATGTTT+AGG | - | chr8_3:57403715-57403734 | None:intergenic | 10.0% |
!!! | TGTTATATTAACATTATTTT+TGG | + | chr8_3:57404072-57404091 | Msa1297310:intron | 10.0% |
!!! | TATTTATCAAATTTTTGTGA+TGG | + | chr8_3:57403598-57403617 | Msa1297310:intron | 15.0% |
!! | AATTAAATTAAACTCAACTA+TGG | + | chr8_3:57403755-57403774 | Msa1297310:intron | 15.0% |
!! | TATTATCTTCAGATTAATTA+AGG | + | chr8_3:57403898-57403917 | Msa1297310:intron | 15.0% |
!! | ATTATCTTCAGATTAATTAA+GGG | + | chr8_3:57403899-57403918 | Msa1297310:intron | 15.0% |
!! | GTACACATATTATAAATTAT+GGG | + | chr8_3:57404025-57404044 | Msa1297310:intron | 15.0% |
!!! | TATTAACATTATTTTTGGTT+TGG | + | chr8_3:57404077-57404096 | Msa1297310:intron | 15.0% |
!! | AATTTACAAACATAGAATAT+AGG | - | chr8_3:57404588-57404607 | None:intergenic | 15.0% |
!!! | TATTTATCAAATTTTTGTGA+TGG | + | chr8_3:57403598-57403617 | Msa1297310:intron | 15.0% |
!! | AATTAAATTAAACTCAACTA+TGG | + | chr8_3:57403755-57403774 | Msa1297310:intron | 15.0% |
!! | TATTATCTTCAGATTAATTA+AGG | + | chr8_3:57403898-57403917 | Msa1297310:intron | 15.0% |
!! | ATTATCTTCAGATTAATTAA+GGG | + | chr8_3:57403899-57403918 | Msa1297310:intron | 15.0% |
!! | GTACACATATTATAAATTAT+GGG | + | chr8_3:57404025-57404044 | Msa1297310:intron | 15.0% |
!!! | TATTAACATTATTTTTGGTT+TGG | + | chr8_3:57404077-57404096 | Msa1297310:intron | 15.0% |
!! | AATTTACAAACATAGAATAT+AGG | - | chr8_3:57404588-57404607 | None:intergenic | 15.0% |
!! | ATCTGAAGATAATATTTCAT+TGG | - | chr8_3:57403892-57403911 | None:intergenic | 20.0% |
!! | ATTTCAATTCAACTTATTCT+GGG | - | chr8_3:57403975-57403994 | None:intergenic | 20.0% |
!! | TATTTCAATTCAACTTATTC+TGG | - | chr8_3:57403976-57403995 | None:intergenic | 20.0% |
!! | CGTACACATATTATAAATTA+TGG | + | chr8_3:57404024-57404043 | Msa1297310:intron | 20.0% |
!!! | ATTATTTTTGGTTTGGATTT+TGG | + | chr8_3:57404084-57404103 | Msa1297310:intron | 20.0% |
!!! | TTATTTTTGGTTTGGATTTT+GGG | + | chr8_3:57404085-57404104 | Msa1297310:intron | 20.0% |
!!! | TTTGTATTTTTTTGGTTGAA+GGG | + | chr8_3:57404460-57404479 | Msa1297310:three_prime_UTR | 20.0% |
!! | GTAAATTACTATAGTAAACA+TGG | + | chr8_3:57404601-57404620 | Msa1297310:three_prime_UTR | 20.0% |
!! | ATCTGAAGATAATATTTCAT+TGG | - | chr8_3:57403892-57403911 | None:intergenic | 20.0% |
!! | ATTTCAATTCAACTTATTCT+GGG | - | chr8_3:57403975-57403994 | None:intergenic | 20.0% |
!! | TATTTCAATTCAACTTATTC+TGG | - | chr8_3:57403976-57403995 | None:intergenic | 20.0% |
!! | CGTACACATATTATAAATTA+TGG | + | chr8_3:57404024-57404043 | Msa1297310:intron | 20.0% |
!!! | ATTATTTTTGGTTTGGATTT+TGG | + | chr8_3:57404084-57404103 | Msa1297310:intron | 20.0% |
!!! | TTATTTTTGGTTTGGATTTT+GGG | + | chr8_3:57404085-57404104 | Msa1297310:intron | 20.0% |
!!! | TTTGTATTTTTTTGGTTGAA+GGG | + | chr8_3:57404460-57404479 | Msa1297310:three_prime_UTR | 20.0% |
!! | GTAAATTACTATAGTAAACA+TGG | + | chr8_3:57404601-57404620 | Msa1297310:three_prime_UTR | 20.0% |
!!! | TTTTTGTTTTGTGAAAGGAA+GGG | - | chr8_3:57403021-57403040 | None:intergenic | 25.0% |
! | TTATGATTACTTGAGGAATA+AGG | - | chr8_3:57403195-57403214 | None:intergenic | 25.0% |
! | ATAGTTGTTATGATTACTTG+AGG | - | chr8_3:57403202-57403221 | None:intergenic | 25.0% |
! | GAGATTATGATTATGATTAC+AGG | - | chr8_3:57403531-57403550 | None:intergenic | 25.0% |
! | TATATTTATGTTTAGGTACC+TGG | - | chr8_3:57403708-57403727 | None:intergenic | 25.0% |
!!! | TCAACTATGGTTTTAAATTG+CGG | + | chr8_3:57403768-57403787 | Msa1297310:intron | 25.0% |
! | GGTGATATATGATATTTATG+TGG | - | chr8_3:57403927-57403946 | None:intergenic | 25.0% |
! | CCATTTACAATAGTATGTAT+GGG | - | chr8_3:57403948-57403967 | None:intergenic | 25.0% |
! | TCCATTTACAATAGTATGTA+TGG | - | chr8_3:57403949-57403968 | None:intergenic | 25.0% |
! | TACATACTATTGTAAATGGA+TGG | + | chr8_3:57403949-57403968 | Msa1297310:intron | 25.0% |
! | ATGTTTCACAACATTTCTTT+AGG | - | chr8_3:57404155-57404174 | None:intergenic | 25.0% |
! | AAACATTAACAGAAGAGAAT+AGG | + | chr8_3:57404169-57404188 | Msa1297310:CDS | 25.0% |
! | AAAAAATACAAAGGTTGTGT+GGG | - | chr8_3:57404452-57404471 | None:intergenic | 25.0% |
! | AAAAAAATACAAAGGTTGTG+TGG | - | chr8_3:57404453-57404472 | None:intergenic | 25.0% |
!!! | ACACAACCTTTGTATTTTTT+TGG | + | chr8_3:57404452-57404471 | Msa1297310:three_prime_UTR | 25.0% |
! | CTTCAACCAAAAAAATACAA+AGG | - | chr8_3:57404461-57404480 | None:intergenic | 25.0% |
!!! | CTTTGTATTTTTTTGGTTGA+AGG | + | chr8_3:57404459-57404478 | Msa1297310:three_prime_UTR | 25.0% |
! | AAATGTATGTGAACTATGAA+AGG | + | chr8_3:57404483-57404502 | Msa1297310:three_prime_UTR | 25.0% |
! | AATGTATGTGAACTATGAAA+GGG | + | chr8_3:57404484-57404503 | Msa1297310:three_prime_UTR | 25.0% |
!!! | TCAATTGTTCATTTTTGTTG+TGG | + | chr8_3:57404655-57404674 | Msa1297310:three_prime_UTR | 25.0% |
!!! | CAATTGTTCATTTTTGTTGT+GGG | + | chr8_3:57404656-57404675 | Msa1297310:three_prime_UTR | 25.0% |
!!! | TTTTTGTTTTGTGAAAGGAA+GGG | - | chr8_3:57403021-57403040 | None:intergenic | 25.0% |
! | TTATGATTACTTGAGGAATA+AGG | - | chr8_3:57403195-57403214 | None:intergenic | 25.0% |
! | ATAGTTGTTATGATTACTTG+AGG | - | chr8_3:57403202-57403221 | None:intergenic | 25.0% |
! | GAGATTATGATTATGATTAC+AGG | - | chr8_3:57403531-57403550 | None:intergenic | 25.0% |
! | TATATTTATGTTTAGGTACC+TGG | - | chr8_3:57403708-57403727 | None:intergenic | 25.0% |
!!! | TCAACTATGGTTTTAAATTG+CGG | + | chr8_3:57403768-57403787 | Msa1297310:intron | 25.0% |
! | GGTGATATATGATATTTATG+TGG | - | chr8_3:57403927-57403946 | None:intergenic | 25.0% |
! | CCATTTACAATAGTATGTAT+GGG | - | chr8_3:57403948-57403967 | None:intergenic | 25.0% |
! | TCCATTTACAATAGTATGTA+TGG | - | chr8_3:57403949-57403968 | None:intergenic | 25.0% |
! | TACATACTATTGTAAATGGA+TGG | + | chr8_3:57403949-57403968 | Msa1297310:intron | 25.0% |
! | ATGTTTCACAACATTTCTTT+AGG | - | chr8_3:57404155-57404174 | None:intergenic | 25.0% |
! | AAACATTAACAGAAGAGAAT+AGG | + | chr8_3:57404169-57404188 | Msa1297310:CDS | 25.0% |
! | AAAAAATACAAAGGTTGTGT+GGG | - | chr8_3:57404452-57404471 | None:intergenic | 25.0% |
! | AAAAAAATACAAAGGTTGTG+TGG | - | chr8_3:57404453-57404472 | None:intergenic | 25.0% |
!!! | ACACAACCTTTGTATTTTTT+TGG | + | chr8_3:57404452-57404471 | Msa1297310:three_prime_UTR | 25.0% |
! | CTTCAACCAAAAAAATACAA+AGG | - | chr8_3:57404461-57404480 | None:intergenic | 25.0% |
!!! | CTTTGTATTTTTTTGGTTGA+AGG | + | chr8_3:57404459-57404478 | Msa1297310:three_prime_UTR | 25.0% |
! | AAATGTATGTGAACTATGAA+AGG | + | chr8_3:57404483-57404502 | Msa1297310:three_prime_UTR | 25.0% |
! | AATGTATGTGAACTATGAAA+GGG | + | chr8_3:57404484-57404503 | Msa1297310:three_prime_UTR | 25.0% |
!!! | TCAATTGTTCATTTTTGTTG+TGG | + | chr8_3:57404655-57404674 | Msa1297310:three_prime_UTR | 25.0% |
!!! | GTTTTTGTTTTGTGAAAGGA+AGG | - | chr8_3:57403022-57403041 | None:intergenic | 30.0% |
!!! | AGGTGTTTTTGTTTTGTGAA+AGG | - | chr8_3:57403026-57403045 | None:intergenic | 30.0% |
GTTTGTGTAGAAAAATCAAG+AGG | - | chr8_3:57403279-57403298 | None:intergenic | 30.0% | |
TTGTTTCATCTTTCTCTAGT+GGG | + | chr8_3:57403319-57403338 | Msa1297310:CDS | 30.0% | |
TGTTAGCAGTGAATTAGAAA+TGG | + | chr8_3:57403362-57403381 | Msa1297310:CDS | 30.0% | |
TGAATTAGAAATGGAAACGA+CGG | + | chr8_3:57403371-57403390 | Msa1297310:CDS | 30.0% | |
ACTTATATTGCAGTACACAA+CGG | - | chr8_3:57403862-57403881 | None:intergenic | 30.0% | |
CCCATACATACTATTGTAAA+TGG | + | chr8_3:57403945-57403964 | Msa1297310:intron | 30.0% | |
CTTAGAGAAATTGCTCTTAT+TGG | - | chr8_3:57404331-57404350 | None:intergenic | 30.0% | |
GTAAACATGGATCTATATGA+AGG | + | chr8_3:57404614-57404633 | Msa1297310:three_prime_UTR | 30.0% | |
!!! | GTTTTTGTTTTGTGAAAGGA+AGG | - | chr8_3:57403022-57403041 | None:intergenic | 30.0% |
!!! | AGGTGTTTTTGTTTTGTGAA+AGG | - | chr8_3:57403026-57403045 | None:intergenic | 30.0% |
GTTTGTGTAGAAAAATCAAG+AGG | - | chr8_3:57403279-57403298 | None:intergenic | 30.0% | |
TTGTTTCATCTTTCTCTAGT+GGG | + | chr8_3:57403319-57403338 | Msa1297310:CDS | 30.0% | |
TGTTAGCAGTGAATTAGAAA+TGG | + | chr8_3:57403362-57403381 | Msa1297310:CDS | 30.0% | |
TGAATTAGAAATGGAAACGA+CGG | + | chr8_3:57403371-57403390 | Msa1297310:CDS | 30.0% | |
ACTTATATTGCAGTACACAA+CGG | - | chr8_3:57403862-57403881 | None:intergenic | 30.0% | |
CCCATACATACTATTGTAAA+TGG | + | chr8_3:57403945-57403964 | Msa1297310:intron | 30.0% | |
CTTAGAGAAATTGCTCTTAT+TGG | - | chr8_3:57404331-57404350 | None:intergenic | 30.0% | |
GTAAACATGGATCTATATGA+AGG | + | chr8_3:57404614-57404633 | Msa1297310:three_prime_UTR | 30.0% | |
AGAGAAGAGAAGAAAGGTAA+GGG | - | chr8_3:57402997-57403016 | None:intergenic | 35.0% | |
AAGAGAAGAGAAGAAAGGTA+AGG | - | chr8_3:57402998-57403017 | None:intergenic | 35.0% | |
! | AGAGAGAGAGATTGGTAATA+AGG | - | chr8_3:57403046-57403065 | None:intergenic | 35.0% |
ATAACTCAAGAGAGAGAGAT+TGG | - | chr8_3:57403054-57403073 | None:intergenic | 35.0% | |
TCTCTCTTGAGTTATCTTGA+TGG | + | chr8_3:57403059-57403078 | Msa1297310:exon | 35.0% | |
CTCTCTTGAGTTATCTTGAT+GGG | + | chr8_3:57403060-57403079 | Msa1297310:exon | 35.0% | |
! | CTAAGCCTAGAATAAGTTGA+AGG | - | chr8_3:57403119-57403138 | None:intergenic | 35.0% |
! | TTTGTAACGTTGTTGTTGGA+TGG | - | chr8_3:57403171-57403190 | None:intergenic | 35.0% |
GATAAACCCAACGTTAAAGA+TGG | - | chr8_3:57403234-57403253 | None:intergenic | 35.0% | |
TTCTTCATAGTAACTCTTGG+TGG | - | chr8_3:57403256-57403275 | None:intergenic | 35.0% | |
AGGTTCTTCATAGTAACTCT+TGG | - | chr8_3:57403259-57403278 | None:intergenic | 35.0% | |
! | GTTGTTTCATCTTTCTCTAG+TGG | + | chr8_3:57403318-57403337 | Msa1297310:CDS | 35.0% |
AAGCATAGCAGATTGATCTT+TGG | - | chr8_3:57403475-57403494 | None:intergenic | 35.0% | |
AGGTGTTAGATTTAACTCTC+TGG | - | chr8_3:57403651-57403670 | None:intergenic | 35.0% | |
! | TAAATTGCGGTTGCAGTTTT+TGG | + | chr8_3:57403781-57403800 | Msa1297310:intron | 35.0% |
CATTAACAGAAGAGAATAGG+AGG | + | chr8_3:57404172-57404191 | Msa1297310:CDS | 35.0% | |
ACATGAAGGACACATAGTAA+GGG | - | chr8_3:57404271-57404290 | None:intergenic | 35.0% | |
TGTGAACTATGAAAGGGTTA+AGG | + | chr8_3:57404490-57404509 | Msa1297310:three_prime_UTR | 35.0% | |
GTGAACTATGAAAGGGTTAA+GGG | + | chr8_3:57404491-57404510 | Msa1297310:three_prime_UTR | 35.0% | |
AGAGAAGAGAAGAAAGGTAA+GGG | - | chr8_3:57402997-57403016 | None:intergenic | 35.0% | |
AAGAGAAGAGAAGAAAGGTA+AGG | - | chr8_3:57402998-57403017 | None:intergenic | 35.0% | |
! | AGAGAGAGAGATTGGTAATA+AGG | - | chr8_3:57403046-57403065 | None:intergenic | 35.0% |
ATAACTCAAGAGAGAGAGAT+TGG | - | chr8_3:57403054-57403073 | None:intergenic | 35.0% | |
TCTCTCTTGAGTTATCTTGA+TGG | + | chr8_3:57403059-57403078 | Msa1297310:exon | 35.0% | |
CTCTCTTGAGTTATCTTGAT+GGG | + | chr8_3:57403060-57403079 | Msa1297310:exon | 35.0% | |
! | CTAAGCCTAGAATAAGTTGA+AGG | - | chr8_3:57403119-57403138 | None:intergenic | 35.0% |
! | TTTGTAACGTTGTTGTTGGA+TGG | - | chr8_3:57403171-57403190 | None:intergenic | 35.0% |
GATAAACCCAACGTTAAAGA+TGG | - | chr8_3:57403234-57403253 | None:intergenic | 35.0% | |
TTCTTCATAGTAACTCTTGG+TGG | - | chr8_3:57403256-57403275 | None:intergenic | 35.0% | |
AGGTTCTTCATAGTAACTCT+TGG | - | chr8_3:57403259-57403278 | None:intergenic | 35.0% | |
! | GTTGTTTCATCTTTCTCTAG+TGG | + | chr8_3:57403318-57403337 | Msa1297310:CDS | 35.0% |
AAGCATAGCAGATTGATCTT+TGG | - | chr8_3:57403475-57403494 | None:intergenic | 35.0% | |
AGGTGTTAGATTTAACTCTC+TGG | - | chr8_3:57403651-57403670 | None:intergenic | 35.0% | |
! | TAAATTGCGGTTGCAGTTTT+TGG | + | chr8_3:57403781-57403800 | Msa1297310:intron | 35.0% |
CATTAACAGAAGAGAATAGG+AGG | + | chr8_3:57404172-57404191 | Msa1297310:CDS | 35.0% | |
ACATGAAGGACACATAGTAA+GGG | - | chr8_3:57404271-57404290 | None:intergenic | 35.0% | |
TGTGAACTATGAAAGGGTTA+AGG | + | chr8_3:57404490-57404509 | Msa1297310:three_prime_UTR | 35.0% | |
GTGAACTATGAAAGGGTTAA+GGG | + | chr8_3:57404491-57404510 | Msa1297310:three_prime_UTR | 35.0% | |
AAGGGAAGAGAAGAGAAGAA+AGG | - | chr8_3:57403003-57403022 | None:intergenic | 40.0% | |
CAAGATGCTAGTAACAACTC+AGG | + | chr8_3:57403093-57403112 | Msa1297310:CDS | 40.0% | |
TCAGGCCTTCAACTTATTCT+AGG | + | chr8_3:57403111-57403130 | Msa1297310:CDS | 40.0% | |
! | AGGCTTTGTAACGTTGTTGT+TGG | - | chr8_3:57403175-57403194 | None:intergenic | 40.0% |
AGCTGAACCATCTTTAACGT+TGG | + | chr8_3:57403224-57403243 | Msa1297310:CDS | 40.0% | |
GCTGAACCATCTTTAACGTT+GGG | + | chr8_3:57403225-57403244 | Msa1297310:CDS | 40.0% | |
TTTCATCTTTCTCTAGTGGG+AGG | + | chr8_3:57403322-57403341 | Msa1297310:CDS | 40.0% | |
TTCATCTTTCTCTAGTGGGA+GGG | + | chr8_3:57403323-57403342 | Msa1297310:CDS | 40.0% | |
AAAGCTGAAGCAAACAGAAG+TGG | + | chr8_3:57404119-57404138 | Msa1297310:CDS | 40.0% | |
AGAGAATAGGAGGCTACAAA+AGG | + | chr8_3:57404182-57404201 | Msa1297310:CDS | 40.0% | |
! | AAAGGAGGTGCAAGAATTGA+AGG | + | chr8_3:57404200-57404219 | Msa1297310:CDS | 40.0% |
CACATGAAGGACACATAGTA+AGG | - | chr8_3:57404272-57404291 | None:intergenic | 40.0% | |
CTGCTGAAGAATTTGTGAAG+GGG | - | chr8_3:57404368-57404387 | None:intergenic | 40.0% | |
GCTGCTGAAGAATTTGTGAA+GGG | - | chr8_3:57404369-57404388 | None:intergenic | 40.0% | |
TGCTGCTGAAGAATTTGTGA+AGG | - | chr8_3:57404370-57404389 | None:intergenic | 40.0% | |
AAGGGAAGAGAAGAGAAGAA+AGG | - | chr8_3:57403003-57403022 | None:intergenic | 40.0% | |
CAAGATGCTAGTAACAACTC+AGG | + | chr8_3:57403093-57403112 | Msa1297310:CDS | 40.0% | |
TCAGGCCTTCAACTTATTCT+AGG | + | chr8_3:57403111-57403130 | Msa1297310:CDS | 40.0% | |
! | AGGCTTTGTAACGTTGTTGT+TGG | - | chr8_3:57403175-57403194 | None:intergenic | 40.0% |
AGCTGAACCATCTTTAACGT+TGG | + | chr8_3:57403224-57403243 | Msa1297310:CDS | 40.0% | |
GCTGAACCATCTTTAACGTT+GGG | + | chr8_3:57403225-57403244 | Msa1297310:CDS | 40.0% | |
TTTCATCTTTCTCTAGTGGG+AGG | + | chr8_3:57403322-57403341 | Msa1297310:CDS | 40.0% | |
TTCATCTTTCTCTAGTGGGA+GGG | + | chr8_3:57403323-57403342 | Msa1297310:CDS | 40.0% | |
AAAGCTGAAGCAAACAGAAG+TGG | + | chr8_3:57404119-57404138 | Msa1297310:CDS | 40.0% | |
AGAGAATAGGAGGCTACAAA+AGG | + | chr8_3:57404182-57404201 | Msa1297310:CDS | 40.0% | |
! | AAAGGAGGTGCAAGAATTGA+AGG | + | chr8_3:57404200-57404219 | Msa1297310:CDS | 40.0% |
CACATGAAGGACACATAGTA+AGG | - | chr8_3:57404272-57404291 | None:intergenic | 40.0% | |
CTGCTGAAGAATTTGTGAAG+GGG | - | chr8_3:57404368-57404387 | None:intergenic | 40.0% | |
GCTGCTGAAGAATTTGTGAA+GGG | - | chr8_3:57404369-57404388 | None:intergenic | 40.0% | |
TGCTGCTGAAGAATTTGTGA+AGG | - | chr8_3:57404370-57404389 | None:intergenic | 40.0% | |
GAAGAAAGGTAAGGGAAGAG+TGG | - | chr8_3:57402989-57403008 | None:intergenic | 45.0% | |
! | GTAACGTTGTTGTTGGATGG+TGG | - | chr8_3:57403168-57403187 | None:intergenic | 45.0% |
GATGAAACAACGCTGTGATG+AGG | - | chr8_3:57403309-57403328 | None:intergenic | 45.0% | |
AGAAATGGAAACGACGGAGA+TGG | + | chr8_3:57403377-57403396 | Msa1297310:CDS | 45.0% | |
ATCAGCGACGAAGATGAAGA+CGG | + | chr8_3:57403417-57403436 | Msa1297310:CDS | 45.0% | |
TCTAACACCTCGACAAGTTG+AGG | + | chr8_3:57403661-57403680 | Msa1297310:CDS | 45.0% | |
!! | TGTTTAGGTACCTGGCTCTA+CGG | - | chr8_3:57403700-57403719 | None:intergenic | 45.0% |
!! | ATTGCGGTTGCAGTTTTTGG+TGG | + | chr8_3:57403784-57403803 | Msa1297310:intron | 45.0% |
! | GCAGTACACAACGGTTTTTG+AGG | - | chr8_3:57403853-57403872 | None:intergenic | 45.0% |
GAATAGGAGGCTACAAAAGG+AGG | + | chr8_3:57404185-57404204 | Msa1297310:CDS | 45.0% | |
GCTGGCATAGGCATATACAA+GGG | - | chr8_3:57404243-57404262 | None:intergenic | 45.0% | |
TGCTGGCATAGGCATATACA+AGG | - | chr8_3:57404244-57404263 | None:intergenic | 45.0% | |
TGTCCTTCATGTGAGAGACT+AGG | + | chr8_3:57404279-57404298 | Msa1297310:CDS | 45.0% | |
GTGAAGGGGTTGTAAAAGTG+AGG | - | chr8_3:57404354-57404373 | None:intergenic | 45.0% | |
GAAGAAAGGTAAGGGAAGAG+TGG | - | chr8_3:57402989-57403008 | None:intergenic | 45.0% | |
! | GTAACGTTGTTGTTGGATGG+TGG | - | chr8_3:57403168-57403187 | None:intergenic | 45.0% |
GATGAAACAACGCTGTGATG+AGG | - | chr8_3:57403309-57403328 | None:intergenic | 45.0% | |
AGAAATGGAAACGACGGAGA+TGG | + | chr8_3:57403377-57403396 | Msa1297310:CDS | 45.0% | |
ATCAGCGACGAAGATGAAGA+CGG | + | chr8_3:57403417-57403436 | Msa1297310:CDS | 45.0% | |
TCTAACACCTCGACAAGTTG+AGG | + | chr8_3:57403661-57403680 | Msa1297310:CDS | 45.0% | |
!! | TGTTTAGGTACCTGGCTCTA+CGG | - | chr8_3:57403700-57403719 | None:intergenic | 45.0% |
!! | ATTGCGGTTGCAGTTTTTGG+TGG | + | chr8_3:57403784-57403803 | Msa1297310:intron | 45.0% |
! | GCAGTACACAACGGTTTTTG+AGG | - | chr8_3:57403853-57403872 | None:intergenic | 45.0% |
GAATAGGAGGCTACAAAAGG+AGG | + | chr8_3:57404185-57404204 | Msa1297310:CDS | 45.0% | |
GCTGGCATAGGCATATACAA+GGG | - | chr8_3:57404243-57404262 | None:intergenic | 45.0% | |
TGCTGGCATAGGCATATACA+AGG | - | chr8_3:57404244-57404263 | None:intergenic | 45.0% | |
TGTCCTTCATGTGAGAGACT+AGG | + | chr8_3:57404279-57404298 | Msa1297310:CDS | 45.0% | |
GTGAAGGGGTTGTAAAAGTG+AGG | - | chr8_3:57404354-57404373 | None:intergenic | 45.0% | |
! | GGATGGTGGTGTGTCTTGTT+TGG | - | chr8_3:57403154-57403173 | None:intergenic | 50.0% |
AAGCTTCTTCCTAGCTGCAG+TGG | - | chr8_3:57403445-57403464 | None:intergenic | 50.0% | |
AACCAGACCTCAACTTGTCG+AGG | - | chr8_3:57403671-57403690 | None:intergenic | 50.0% | |
CACATAGTAAGGGTAGCTGC+TGG | - | chr8_3:57404261-57404280 | None:intergenic | 50.0% | |
CCACCTAGTCTCTCACATGA+AGG | - | chr8_3:57404285-57404304 | None:intergenic | 50.0% | |
CCTTCATGTGAGAGACTAGG+TGG | + | chr8_3:57404282-57404301 | Msa1297310:CDS | 50.0% | |
TCATGTGAGAGACTAGGTGG+TGG | + | chr8_3:57404285-57404304 | Msa1297310:CDS | 50.0% | |
!! | CTAGGTGGTGGTGGTGTTAA+TGG | + | chr8_3:57404297-57404316 | Msa1297310:CDS | 50.0% |
! | GGATGGTGGTGTGTCTTGTT+TGG | - | chr8_3:57403154-57403173 | None:intergenic | 50.0% |
AAGCTTCTTCCTAGCTGCAG+TGG | - | chr8_3:57403445-57403464 | None:intergenic | 50.0% | |
AACCAGACCTCAACTTGTCG+AGG | - | chr8_3:57403671-57403690 | None:intergenic | 50.0% | |
CACATAGTAAGGGTAGCTGC+TGG | - | chr8_3:57404261-57404280 | None:intergenic | 50.0% | |
CCACCTAGTCTCTCACATGA+AGG | - | chr8_3:57404285-57404304 | None:intergenic | 50.0% | |
CCTTCATGTGAGAGACTAGG+TGG | + | chr8_3:57404282-57404301 | Msa1297310:CDS | 50.0% | |
TCATGTGAGAGACTAGGTGG+TGG | + | chr8_3:57404285-57404304 | Msa1297310:CDS | 50.0% | |
!! | CTAGGTGGTGGTGGTGTTAA+TGG | + | chr8_3:57404297-57404316 | Msa1297310:CDS | 50.0% |
! | CACCTCGACAAGTTGAGGTC+TGG | + | chr8_3:57403666-57403685 | Msa1297310:CDS | 55.0% |
GTAAGGGTAGCTGCTGGCAT+AGG | - | chr8_3:57404255-57404274 | None:intergenic | 55.0% | |
! | TGTGAGAGACTAGGTGGTGG+TGG | + | chr8_3:57404288-57404307 | Msa1297310:CDS | 55.0% |
!! | GGTGGTGGTGGTGTTAATGG+TGG | + | chr8_3:57404300-57404319 | Msa1297310:CDS | 55.0% |
! | CACCTCGACAAGTTGAGGTC+TGG | + | chr8_3:57403666-57403685 | Msa1297310:CDS | 55.0% |
GTAAGGGTAGCTGCTGGCAT+AGG | - | chr8_3:57404255-57404274 | None:intergenic | 55.0% | |
! | TGTGAGAGACTAGGTGGTGG+TGG | + | chr8_3:57404288-57404307 | Msa1297310:CDS | 55.0% |
!! | GGTGGTGGTGGTGTTAATGG+TGG | + | chr8_3:57404300-57404319 | Msa1297310:CDS | 55.0% |
!! | AAGACGGTGCCACTGCAGCT+AGG | + | chr8_3:57403433-57403452 | Msa1297310:CDS | 60.0% |
GGTTCCAGAACCGTAGAGCC+AGG | + | chr8_3:57403687-57403706 | Msa1297310:CDS | 60.0% | |
!! | GGTACCTGGCTCTACGGTTC+TGG | - | chr8_3:57403694-57403713 | None:intergenic | 60.0% |
!! | AAGACGGTGCCACTGCAGCT+AGG | + | chr8_3:57403433-57403452 | Msa1297310:CDS | 60.0% |
GGTTCCAGAACCGTAGAGCC+AGG | + | chr8_3:57403687-57403706 | Msa1297310:CDS | 60.0% | |
!! | GGTACCTGGCTCTACGGTTC+TGG | - | chr8_3:57403694-57403713 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 57402986 | 57404678 | 57402986 | ID=Msa1297310;Name=Msa1297310 |
chr8_3 | mRNA | 57402986 | 57404678 | 57402986 | ID=Msa1297310-mRNA-1;Parent=Msa1297310;Name=Msa1297310-mRNA-1;_AED=0.07;_eAED=0.07;_QI=92|1|1|1|1|1|3|283|270 |
chr8_3 | exon | 57402986 | 57403530 | 57402986 | ID=Msa1297310-mRNA-1:exon:16483;Parent=Msa1297310-mRNA-1 |
chr8_3 | exon | 57403629 | 57403708 | 57403629 | ID=Msa1297310-mRNA-1:exon:16484;Parent=Msa1297310-mRNA-1 |
chr8_3 | exon | 57404116 | 57404678 | 57404116 | ID=Msa1297310-mRNA-1:exon:16485;Parent=Msa1297310-mRNA-1 |
chr8_3 | five_prime_UTR | 57402986 | 57403077 | 57402986 | ID=Msa1297310-mRNA-1:five_prime_utr;Parent=Msa1297310-mRNA-1 |
chr8_3 | CDS | 57403078 | 57403530 | 57403078 | ID=Msa1297310-mRNA-1:cds;Parent=Msa1297310-mRNA-1 |
chr8_3 | CDS | 57403629 | 57403708 | 57403629 | ID=Msa1297310-mRNA-1:cds;Parent=Msa1297310-mRNA-1 |
chr8_3 | CDS | 57404116 | 57404395 | 57404116 | ID=Msa1297310-mRNA-1:cds;Parent=Msa1297310-mRNA-1 |
chr8_3 | three_prime_UTR | 57404396 | 57404678 | 57404396 | ID=Msa1297310-mRNA-1:three_prime_utr;Parent=Msa1297310-mRNA-1 |
Gene Sequence |
Protein sequence |