Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385020 | XP_013457515.1 | 98.524 | 271 | 3 | 1 | 1 | 270 | 1 | 271 | 0.0 | 550 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385020 | sp|P46604|HAT22_ARATH | 61.806 | 288 | 82 | 9 | 1 | 270 | 1 | 278 | 2.57e-90 | 271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385020 | A0A072UQB3 | 98.524 | 271 | 3 | 1 | 1 | 270 | 1 | 271 | 0.0 | 550 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1385020 | TF | HB-HD-ZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006510 | Msa1385020 | 0.811657 | 6.274123e-51 | -8.615850e-47 |
| Msa0029850 | Msa1385020 | 0.824049 | 9.963303e-54 | -8.615850e-47 |
| Msa0042550 | Msa1385020 | 0.857751 | 1.318514e-62 | -8.615850e-47 |
| Msa0055070 | Msa1385020 | 0.836693 | 8.060121e-57 | -8.615850e-47 |
| Msa0077180 | Msa1385020 | 0.801564 | 8.485204e-49 | -8.615850e-47 |
| Msa0084720 | Msa1385020 | 0.810607 | 1.059913e-50 | -8.615850e-47 |
| Msa0085720 | Msa1385020 | 0.810297 | 1.236266e-50 | -8.615850e-47 |
| Msa0101020 | Msa1385020 | 0.838397 | 2.947347e-57 | -8.615850e-47 |
| Msa1352540 | Msa1385020 | -0.818828 | 1.598521e-52 | -8.615850e-47 |
| Msa1372150 | Msa1385020 | 0.848210 | 7.085547e-60 | -8.615850e-47 |
| Msa1376930 | Msa1385020 | 0.837761 | 4.296328e-57 | -8.615850e-47 |
| Msa1385020 | Msa1407650 | 0.805620 | 1.222279e-49 | -8.615850e-47 |
| Msa1385020 | Msa1408180 | 0.814019 | 1.906965e-51 | -8.615850e-47 |
| Msa1385020 | Msa1408340 | 0.806478 | 8.067889e-50 | -8.615850e-47 |
| Msa1385020 | Msa1423820 | 0.819222 | 1.300554e-52 | -8.615850e-47 |
| Msa1385020 | Msa1424630 | 0.851239 | 1.010030e-60 | -8.615850e-47 |
| Msa1385020 | Msa1433440 | 0.804355 | 2.248236e-49 | -8.615850e-47 |
| Msa1385020 | Msa1440940 | 0.811199 | 7.890701e-51 | -8.615850e-47 |
| Msa1385020 | Msa1448980 | 0.814658 | 1.377289e-51 | -8.615850e-47 |
| Msa1385020 | Msa1458510 | 0.839354 | 1.666398e-57 | -8.615850e-47 |
| Msa0613460 | Msa1385020 | 0.811870 | 5.639413e-51 | -8.615850e-47 |
| Msa0615340 | Msa1385020 | 0.808135 | 3.593142e-50 | -8.615850e-47 |
| Msa0622170 | Msa1385020 | -0.811643 | 6.317798e-51 | -8.615850e-47 |
| Msa0622600 | Msa1385020 | 0.819073 | 1.406616e-52 | -8.615850e-47 |
| Msa0626990 | Msa1385020 | 0.831365 | 1.740016e-55 | -8.615850e-47 |
| Msa0627350 | Msa1385020 | 0.829980 | 3.799013e-55 | -8.615850e-47 |
| Msa0653440 | Msa1385020 | 0.840976 | 6.285485e-58 | -8.615850e-47 |
| Msa0667740 | Msa1385020 | 0.802658 | 5.054303e-49 | -8.615850e-47 |
| Msa0679550 | Msa1385020 | 0.818467 | 1.930889e-52 | -8.615850e-47 |
| Msa0695870 | Msa1385020 | 0.853715 | 1.989244e-61 | -8.615850e-47 |
| Msa0698440 | Msa1385020 | 0.806874 | 6.655841e-50 | -8.615850e-47 |
| Msa0698930 | Msa1385020 | 0.808160 | 3.549714e-50 | -8.615850e-47 |
| Msa0731180 | Msa1385020 | 0.804798 | 1.816994e-49 | -8.615850e-47 |
| Msa0755070 | Msa1385020 | 0.808115 | 3.628688e-50 | -8.615850e-47 |
| Msa0773310 | Msa1385020 | 0.842166 | 3.051817e-58 | -8.615850e-47 |
| Msa0787580 | Msa1385020 | -0.815739 | 7.922689e-52 | -8.615850e-47 |
| Msa0796960 | Msa1385020 | 0.808438 | 3.096467e-50 | -8.615850e-47 |
| Msa0800770 | Msa1385020 | 0.829669 | 4.523870e-55 | -8.615850e-47 |
| Msa0807030 | Msa1385020 | 0.819561 | 1.088801e-52 | -8.615850e-47 |
| Msa0810760 | Msa1385020 | 0.853563 | 2.199713e-61 | -8.615850e-47 |
| Msa0818110 | Msa1385020 | 0.835180 | 1.950164e-56 | -8.615850e-47 |
| Msa0829830 | Msa1385020 | 0.808871 | 2.503438e-50 | -8.615850e-47 |
| Msa0831850 | Msa1385020 | 0.806040 | 9.977967e-50 | -8.615850e-47 |
| Msa0832970 | Msa1385020 | 0.800230 | 1.588645e-48 | -8.615850e-47 |
| Msa0834440 | Msa1385020 | 0.800570 | 1.354806e-48 | -8.615850e-47 |
| Msa0838930 | Msa1385020 | 0.827628 | 1.408794e-54 | -8.615850e-47 |
| Msa0124550 | Msa1385020 | 0.809090 | 2.246553e-50 | -8.615850e-47 |
| Msa0142280 | Msa1385020 | 0.809905 | 1.501628e-50 | -8.615850e-47 |
| Msa0145110 | Msa1385020 | 0.817457 | 3.265542e-52 | -8.615850e-47 |
| Msa0169820 | Msa1385020 | 0.836263 | 1.036725e-56 | -8.615850e-47 |
| Msa0175050 | Msa1385020 | 0.824916 | 6.229077e-54 | -8.615850e-47 |
| Msa0178510 | Msa1385020 | 0.850957 | 1.213153e-60 | -8.615850e-47 |
| Msa0183010 | Msa1385020 | -0.806061 | 9.875003e-50 | -8.615850e-47 |
| Msa0187830 | Msa1385020 | 0.851742 | 7.280385e-61 | -8.615850e-47 |
| Msa0188050 | Msa1385020 | 0.821776 | 3.373314e-53 | -8.615850e-47 |
| Msa0190530 | Msa1385020 | 0.822196 | 2.696067e-53 | -8.615850e-47 |
| Msa0193540 | Msa1385020 | 0.800566 | 1.357033e-48 | -8.615850e-47 |
| Msa0194010 | Msa1385020 | 0.800541 | 1.373172e-48 | -8.615850e-47 |
| Msa0229590 | Msa1385020 | 0.816479 | 5.414063e-52 | -8.615850e-47 |
| Msa0232720 | Msa1385020 | 0.802793 | 4.738688e-49 | -8.615850e-47 |
| Msa0235880 | Msa1385020 | 0.810180 | 1.310465e-50 | -8.615850e-47 |
| Msa1229610 | Msa1385020 | 0.818223 | 2.193157e-52 | -8.615850e-47 |
| Msa1235400 | Msa1385020 | 0.808799 | 2.592846e-50 | -8.615850e-47 |
| Msa1236730 | Msa1385020 | 0.806755 | 7.050298e-50 | -8.615850e-47 |
| Msa1243100 | Msa1385020 | 0.802501 | 5.445428e-49 | -8.615850e-47 |
| Msa1244930 | Msa1385020 | 0.807187 | 5.712488e-50 | -8.615850e-47 |
| Msa1250310 | Msa1385020 | 0.910071 | 2.821567e-82 | -8.615850e-47 |
| Msa1255060 | Msa1385020 | 0.815211 | 1.038260e-51 | -8.615850e-47 |
| Msa1256410 | Msa1385020 | 0.802410 | 5.685520e-49 | -8.615850e-47 |
| Msa1262990 | Msa1385020 | -0.816393 | 5.658345e-52 | -8.615850e-47 |
| Msa1264860 | Msa1385020 | -0.810692 | 1.015679e-50 | -8.615850e-47 |
| Msa1272320 | Msa1385020 | 0.805953 | 1.040688e-49 | -8.615850e-47 |
| Msa1288450 | Msa1385020 | 0.802748 | 4.842984e-49 | -8.615850e-47 |
| Msa1295510 | Msa1385020 | 0.803307 | 3.711063e-49 | -8.615850e-47 |
| Msa1297310 | Msa1385020 | 0.999280 | 2.388783e-300 | -8.615850e-47 |
| Msa1301720 | Msa1385020 | 0.827268 | 1.718336e-54 | -8.615850e-47 |
| Msa1304890 | Msa1385020 | -0.812647 | 3.816196e-51 | -8.615850e-47 |
| Msa1310220 | Msa1385020 | 0.829695 | 4.457792e-55 | -8.615850e-47 |
| Msa1311340 | Msa1385020 | 0.821255 | 4.448979e-53 | -8.615850e-47 |
| Msa1314770 | Msa1385020 | 0.812102 | 5.020402e-51 | -8.615850e-47 |
| Msa1322200 | Msa1385020 | 0.800868 | 1.177543e-48 | -8.615850e-47 |
| Msa1335230 | Msa1385020 | 0.802681 | 4.997651e-49 | -8.615850e-47 |
| Msa1343250 | Msa1385020 | 0.835444 | 1.672591e-56 | -8.615850e-47 |
| Msa0388030 | Msa1385020 | -0.802782 | 4.765330e-49 | -8.615850e-47 |
| Msa0422180 | Msa1385020 | 0.828122 | 1.071472e-54 | -8.615850e-47 |
| Msa0429090 | Msa1385020 | 0.821827 | 3.282224e-53 | -8.615850e-47 |
| Msa0466010 | Msa1385020 | 0.803384 | 3.577546e-49 | -8.615850e-47 |
| Msa0475500 | Msa1385020 | 0.802416 | 5.667892e-49 | -8.615850e-47 |
| Msa1021510 | Msa1385020 | 0.810927 | 9.037914e-51 | -8.615850e-47 |
| Msa1026410 | Msa1385020 | 0.803885 | 2.815696e-49 | -8.615850e-47 |
| Msa1026940 | Msa1385020 | 0.810517 | 1.108129e-50 | -8.615850e-47 |
| Msa1033780 | Msa1385020 | 0.818885 | 1.551823e-52 | -8.615850e-47 |
| Msa1039710 | Msa1385020 | -0.820961 | 5.201864e-53 | -8.615850e-47 |
| Msa1077340 | Msa1385020 | 0.821350 | 4.231278e-53 | -8.615850e-47 |
| Msa1084120 | Msa1385020 | 0.808008 | 3.824288e-50 | -8.615850e-47 |
| Msa1098250 | Msa1385020 | 0.811480 | 6.855630e-51 | -8.615850e-47 |
| Msa1098270 | Msa1385020 | 0.823280 | 1.507895e-53 | -8.615850e-47 |
| Msa1105500 | Msa1385020 | 0.808332 | 3.262472e-50 | -8.615850e-47 |
| Msa0239690 | Msa1385020 | 0.819951 | 8.870083e-53 | -8.615850e-47 |
| Msa0240270 | Msa1385020 | 0.817072 | 3.985295e-52 | -8.615850e-47 |
| Msa0244140 | Msa1385020 | 0.807798 | 4.239382e-50 | -8.615850e-47 |
| Msa0244190 | Msa1385020 | 0.805947 | 1.043439e-49 | -8.615850e-47 |
| Msa0278900 | Msa1385020 | 0.819885 | 9.181315e-53 | -8.615850e-47 |
| Msa0282720 | Msa1385020 | 0.800506 | 1.396022e-48 | -8.615850e-47 |
| Msa0308460 | Msa1385020 | 0.808085 | 3.682519e-50 | -8.615850e-47 |
| Msa0311470 | Msa1385020 | 0.802053 | 6.731527e-49 | -8.615850e-47 |
| Msa0322680 | Msa1385020 | 0.812457 | 4.199633e-51 | -8.615850e-47 |
| Msa0338730 | Msa1385020 | -0.806182 | 9.312960e-50 | -8.615850e-47 |
| Msa0342070 | Msa1385020 | 0.881384 | 2.509649e-70 | -8.615850e-47 |
| Msa0344690 | Msa1385020 | -0.805270 | 1.447367e-49 | -8.615850e-47 |
| Msa1115280 | Msa1385020 | 0.816267 | 6.039539e-52 | -8.615850e-47 |
| Msa1118760 | Msa1385020 | 0.828068 | 1.104140e-54 | -8.615850e-47 |
| Msa1138280 | Msa1385020 | 0.825237 | 5.229430e-54 | -8.615850e-47 |
| Msa1143020 | Msa1385020 | 0.828031 | 1.126725e-54 | -8.615850e-47 |
| Msa1162060 | Msa1385020 | 0.808638 | 2.806918e-50 | -8.615850e-47 |
| Msa1177780 | Msa1385020 | 0.825961 | 3.523532e-54 | -8.615850e-47 |
| Msa1182130 | Msa1385020 | 0.828237 | 1.005300e-54 | -8.615850e-47 |
| Msa1202750 | Msa1385020 | 0.804282 | 2.328419e-49 | -8.615850e-47 |
| Msa1204440 | Msa1385020 | 0.802876 | 4.555473e-49 | -8.615850e-47 |
| Msa1205390 | Msa1385020 | 0.969915 | 7.882485e-131 | -8.615850e-47 |
| Msa1222280 | Msa1385020 | 0.823781 | 1.151618e-53 | -8.615850e-47 |
| Msa1224200 | Msa1385020 | 0.803261 | 3.792186e-49 | -8.615850e-47 |
| Msa0485490 | Msa1385020 | 0.838181 | 3.349117e-57 | -8.615850e-47 |
| Msa0525610 | Msa1385020 | 0.839978 | 1.146245e-57 | -8.615850e-47 |
| Msa0526070 | Msa1385020 | -0.820798 | 5.669398e-53 | -8.615850e-47 |
| Msa0526100 | Msa1385020 | -0.809216 | 2.111209e-50 | -8.615850e-47 |
| Msa0530650 | Msa1385020 | 0.834338 | 3.176350e-56 | -8.615850e-47 |
| Msa0557410 | Msa1385020 | 0.801437 | 9.010168e-49 | -8.615850e-47 |
| Msa0572480 | Msa1385020 | 0.802270 | 6.074476e-49 | -8.615850e-47 |
| Msa0574850 | Msa1385020 | 0.817618 | 3.003488e-52 | -8.615850e-47 |
| Msa0587190 | Msa1385020 | 0.828295 | 9.735539e-55 | -8.615850e-47 |
| Msa0847880 | Msa1385020 | 0.800384 | 1.478441e-48 | -8.615850e-47 |
| Msa0870060 | Msa1385020 | 0.821504 | 3.898222e-53 | -8.615850e-47 |
| Msa0874630 | Msa1385020 | 0.884864 | 1.331955e-71 | -8.615850e-47 |
| Msa0876360 | Msa1385020 | 0.813142 | 2.972206e-51 | -8.615850e-47 |
| Msa0881160 | Msa1385020 | 0.817597 | 3.037057e-52 | -8.615850e-47 |
| Msa0925870 | Msa1385020 | 0.823861 | 1.102601e-53 | -8.615850e-47 |
| Msa0935770 | Msa1385020 | 0.832106 | 1.142460e-55 | -8.615850e-47 |
| Msa0968150 | Msa1385020 | 0.817726 | 2.839205e-52 | -8.615850e-47 |
| Msa0972810 | Msa1385020 | 0.808204 | 3.473285e-50 | -8.615850e-47 |
| Msa0976290 | Msa1385020 | 0.850233 | 1.938561e-60 | -8.615850e-47 |
| Msa0978700 | Msa1385020 | 0.808589 | 2.875089e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385020 | MtrunA17_Chr4g0054421 | 98.524 | 271 | 3 | 1 | 1 | 270 | 1 | 271 | 0.0 | 550 |
| Msa1385020 | MtrunA17_Chr5g0400781 | 63.860 | 285 | 73 | 8 | 1 | 270 | 1 | 270 | 1.00e-102 | 300 |
| Msa1385020 | MtrunA17_Chr1g0175651 | 62.963 | 189 | 48 | 4 | 68 | 255 | 116 | 283 | 2.86e-72 | 223 |
| Msa1385020 | MtrunA17_Chr2g0308611 | 76.119 | 134 | 31 | 1 | 108 | 240 | 180 | 313 | 1.41e-67 | 213 |
| Msa1385020 | MtrunA17_Chr7g0258831 | 76.984 | 126 | 27 | 1 | 115 | 240 | 150 | 273 | 8.49e-66 | 207 |
| Msa1385020 | MtrunA17_Chr5g0399491 | 68.293 | 164 | 42 | 4 | 79 | 240 | 95 | 250 | 2.27e-65 | 206 |
| Msa1385020 | MtrunA17_Chr1g0151971 | 45.847 | 301 | 114 | 9 | 5 | 270 | 2 | 288 | 6.10e-65 | 204 |
| Msa1385020 | MtrunA17_Chr4g0055851 | 66.667 | 162 | 41 | 2 | 80 | 240 | 85 | 234 | 7.91e-65 | 204 |
| Msa1385020 | MtrunA17_Chr8g0335131 | 82.456 | 114 | 19 | 1 | 126 | 238 | 145 | 258 | 6.04e-62 | 197 |
| Msa1385020 | MtrunA17_Chr3g0135331 | 54.124 | 194 | 64 | 6 | 90 | 268 | 117 | 300 | 5.65e-50 | 166 |
| Msa1385020 | MtrunA17_Chr4g0044091 | 63.866 | 119 | 37 | 1 | 126 | 238 | 64 | 182 | 8.02e-49 | 160 |
| Msa1385020 | MtrunA17_Chr2g0299031 | 44.211 | 190 | 93 | 4 | 54 | 239 | 15 | 195 | 1.08e-39 | 137 |
| Msa1385020 | MtrunA17_Chr4g0071411 | 59.649 | 114 | 42 | 2 | 129 | 238 | 90 | 203 | 3.06e-35 | 125 |
| Msa1385020 | MtrunA17_Chr5g0416391 | 47.664 | 107 | 54 | 1 | 114 | 218 | 62 | 168 | 3.38e-21 | 90.5 |
| Msa1385020 | MtrunA17_Chr7g0265521 | 42.991 | 107 | 61 | 0 | 108 | 214 | 44 | 150 | 1.33e-20 | 87.8 |
| Msa1385020 | MtrunA17_Chr3g0119291 | 35.417 | 192 | 112 | 5 | 80 | 261 | 12 | 201 | 2.78e-20 | 87.4 |
| Msa1385020 | MtrunA17_Chr8g0362151 | 42.735 | 117 | 64 | 1 | 102 | 218 | 55 | 168 | 8.95e-20 | 86.7 |
| Msa1385020 | MtrunA17_Chr7g0217111 | 46.602 | 103 | 51 | 1 | 118 | 216 | 71 | 173 | 4.08e-19 | 84.3 |
| Msa1385020 | MtrunA17_Chr6g0450991 | 50.000 | 88 | 44 | 0 | 127 | 214 | 67 | 154 | 5.83e-19 | 84.3 |
| Msa1385020 | MtrunA17_Chr4g0060031 | 45.455 | 99 | 54 | 0 | 116 | 214 | 84 | 182 | 1.99e-17 | 80.9 |
| Msa1385020 | MtrunA17_Chr8g0381741 | 47.170 | 106 | 47 | 2 | 118 | 214 | 43 | 148 | 2.59e-17 | 80.1 |
| Msa1385020 | MtrunA17_Chr3g0123691 | 37.975 | 158 | 85 | 5 | 119 | 265 | 52 | 207 | 2.86e-17 | 79.7 |
| Msa1385020 | MtrunA17_Chr1g0179581 | 48.193 | 83 | 43 | 0 | 127 | 209 | 28 | 110 | 3.12e-17 | 75.5 |
| Msa1385020 | MtrunA17_Chr6g0453021 | 45.192 | 104 | 49 | 2 | 118 | 213 | 86 | 189 | 6.64e-17 | 78.6 |
| Msa1385020 | MtrunA17_Chr5g0415941 | 40.000 | 135 | 65 | 3 | 87 | 213 | 54 | 180 | 7.56e-17 | 79.0 |
| Msa1385020 | MtrunA17_Chr8g0362751 | 46.809 | 94 | 43 | 1 | 127 | 213 | 89 | 182 | 5.92e-16 | 75.9 |
| Msa1385020 | MtrunA17_Chr5g0403701 | 43.689 | 103 | 53 | 1 | 119 | 221 | 45 | 142 | 8.47e-13 | 65.9 |
| Msa1385020 | MtrunA17_Chr5g0403691 | 42.857 | 105 | 58 | 1 | 119 | 221 | 45 | 149 | 9.16e-13 | 65.9 |
| Msa1385020 | MtrunA17_Chr3g0127511 | 43.011 | 93 | 46 | 1 | 130 | 215 | 41 | 133 | 2.62e-12 | 65.1 |
| Msa1385020 | MtrunA17_Chr8g0346251 | 42.683 | 82 | 47 | 0 | 131 | 212 | 45 | 126 | 1.85e-11 | 62.8 |
| Msa1385020 | MtrunA17_Chr5g0410711 | 35.849 | 106 | 68 | 0 | 118 | 223 | 83 | 188 | 3.85e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385020 | AT4G37790.1 | 61.806 | 288 | 82 | 9 | 1 | 270 | 1 | 278 | 2.61e-91 | 271 |
| Msa1385020 | AT2G22800.1 | 58.163 | 294 | 79 | 11 | 1 | 270 | 1 | 274 | 2.63e-83 | 251 |
| Msa1385020 | AT5G06710.1 | 61.376 | 189 | 56 | 4 | 76 | 254 | 136 | 317 | 4.99e-70 | 219 |
| Msa1385020 | AT5G47370.1 | 57.789 | 199 | 74 | 4 | 72 | 264 | 70 | 264 | 1.75e-66 | 208 |
| Msa1385020 | AT3G60390.1 | 60.656 | 183 | 57 | 6 | 69 | 238 | 94 | 274 | 1.22e-62 | 199 |
| Msa1385020 | AT4G17460.1 | 60.221 | 181 | 64 | 5 | 68 | 241 | 71 | 250 | 4.76e-62 | 197 |
| Msa1385020 | AT4G16780.1 | 75.194 | 129 | 30 | 2 | 112 | 239 | 115 | 242 | 2.00e-61 | 196 |
| Msa1385020 | AT2G44910.1 | 79.130 | 115 | 23 | 1 | 126 | 239 | 162 | 276 | 7.21e-59 | 190 |
| Msa1385020 | AT2G01430.1 | 54.676 | 139 | 56 | 2 | 106 | 239 | 113 | 249 | 2.42e-44 | 151 |
| Msa1385020 | AT1G70920.2 | 52.941 | 136 | 57 | 1 | 114 | 249 | 26 | 154 | 1.03e-40 | 139 |
| Msa1385020 | AT1G70920.1 | 56.349 | 126 | 48 | 1 | 114 | 239 | 56 | 174 | 1.19e-40 | 140 |
| Msa1385020 | AT5G06710.4 | 59.292 | 113 | 29 | 4 | 76 | 178 | 136 | 241 | 5.02e-30 | 114 |
| Msa1385020 | AT2G01430.2 | 50.526 | 95 | 40 | 2 | 106 | 195 | 113 | 205 | 1.12e-22 | 93.2 |
| Msa1385020 | AT1G69780.1 | 46.465 | 99 | 53 | 0 | 116 | 214 | 74 | 172 | 7.54e-20 | 87.4 |
| Msa1385020 | AT1G26960.1 | 41.964 | 112 | 65 | 0 | 119 | 230 | 63 | 174 | 2.21e-19 | 85.1 |
| Msa1385020 | AT5G03790.1 | 35.374 | 147 | 79 | 2 | 127 | 257 | 77 | 223 | 3.75e-18 | 81.6 |
| Msa1385020 | AT5G65310.1 | 45.000 | 100 | 48 | 1 | 122 | 214 | 67 | 166 | 1.60e-16 | 78.2 |
| Msa1385020 | AT3G01470.1 | 45.161 | 93 | 44 | 1 | 127 | 212 | 68 | 160 | 1.81e-16 | 77.4 |
| Msa1385020 | AT5G65310.2 | 45.000 | 100 | 48 | 1 | 122 | 214 | 49 | 148 | 1.98e-16 | 77.8 |
| Msa1385020 | AT2G18550.1 | 44.000 | 100 | 56 | 0 | 114 | 213 | 48 | 147 | 8.11e-16 | 74.7 |
| Msa1385020 | AT5G03790.2 | 47.253 | 91 | 48 | 0 | 127 | 217 | 77 | 167 | 9.71e-16 | 73.9 |
| Msa1385020 | AT5G15150.1 | 42.478 | 113 | 56 | 3 | 113 | 216 | 96 | 208 | 1.32e-15 | 75.9 |
| Msa1385020 | AT4G36740.2 | 44.681 | 94 | 52 | 0 | 120 | 213 | 49 | 142 | 2.40e-15 | 73.6 |
| Msa1385020 | AT4G36740.1 | 44.681 | 94 | 52 | 0 | 120 | 213 | 48 | 141 | 2.44e-15 | 73.6 |
| Msa1385020 | AT4G40060.1 | 44.330 | 97 | 47 | 1 | 125 | 214 | 57 | 153 | 2.55e-15 | 74.7 |
| Msa1385020 | AT3G01220.1 | 43.269 | 104 | 53 | 2 | 119 | 216 | 77 | 180 | 2.91e-15 | 74.3 |
| Msa1385020 | AT1G27045.4 | 46.875 | 96 | 44 | 1 | 127 | 215 | 68 | 163 | 4.78e-15 | 73.2 |
| Msa1385020 | AT1G27045.1 | 40.909 | 132 | 62 | 3 | 127 | 250 | 68 | 191 | 5.93e-15 | 72.4 |
| Msa1385020 | AT1G27045.2 | 57.576 | 66 | 28 | 0 | 127 | 192 | 17 | 82 | 8.87e-15 | 70.9 |
| Msa1385020 | AT1G27045.5 | 57.576 | 66 | 28 | 0 | 127 | 192 | 25 | 90 | 9.67e-15 | 71.2 |
| Msa1385020 | AT1G27045.3 | 57.576 | 66 | 28 | 0 | 127 | 192 | 25 | 90 | 9.67e-15 | 71.2 |
| Msa1385020 | AT2G36610.1 | 40.816 | 98 | 50 | 1 | 126 | 215 | 70 | 167 | 3.41e-14 | 69.7 |
| Msa1385020 | AT2G22430.1 | 43.750 | 96 | 50 | 1 | 125 | 216 | 60 | 155 | 7.56e-14 | 70.5 |
| Msa1385020 | AT2G46680.1 | 43.011 | 93 | 49 | 1 | 130 | 218 | 35 | 127 | 1.56e-13 | 68.9 |
| Msa1385020 | AT2G46680.2 | 41.111 | 90 | 53 | 0 | 130 | 219 | 35 | 124 | 1.57e-13 | 68.9 |
| Msa1385020 | AT5G06710.2 | 51.163 | 86 | 25 | 4 | 76 | 151 | 136 | 214 | 4.12e-12 | 64.7 |
| Msa1385020 | AT5G06710.3 | 51.163 | 86 | 25 | 4 | 76 | 151 | 136 | 214 | 4.12e-12 | 64.7 |
| Msa1385020 | AT3G61890.1 | 38.947 | 95 | 44 | 1 | 130 | 210 | 33 | 127 | 2.74e-11 | 62.4 |
| Msa1385020 | AT5G66700.1 | 44.872 | 78 | 43 | 0 | 115 | 192 | 59 | 136 | 6.59e-11 | 61.2 |
| Msa1385020 | AT1G79840.1 | 43.373 | 83 | 46 | 1 | 126 | 207 | 102 | 184 | 9.84e-11 | 62.4 |
Find 74 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAGAGAAATTGCTCTTAT+TGG | 0.187884 | tig0020703:-62422 | None:intergenic |
| CTAGGTGGTGGTGGTGTTAA+TGG | 0.243245 | tig0020703:+62391 | Msa1385020:CDS |
| TCAGGCCTTCAACTTATTCT+AGG | 0.257483 | tig0020703:+61205 | Msa1385020:CDS |
| ATGTTTCACAACATTTCTTT+AGG | 0.284664 | tig0020703:-62246 | None:intergenic |
| GGTACCTGGCTCTACGGTTC+TGG | 0.298360 | tig0020703:-61785 | None:intergenic |
| AGAGAGAGAGATTGGTAATA+AGG | 0.313031 | tig0020703:-61137 | None:intergenic |
| TTATGATTACTTGAGGAATA+AGG | 0.345806 | tig0020703:-61286 | None:intergenic |
| AAGCATAGCAGATTGATCTT+TGG | 0.351274 | tig0020703:-61566 | None:intergenic |
| GGATGGTGGTGTGTCTTGTT+TGG | 0.360529 | tig0020703:-61245 | None:intergenic |
| TCTCTCTTGAGTTATCTTGA+TGG | 0.382425 | tig0020703:+61153 | Msa1385020:exon |
| CTCTCTTGAGTTATCTTGAT+GGG | 0.399406 | tig0020703:+61154 | Msa1385020:exon |
| TGTGAACTATGAAAGGGTTA+AGG | 0.429954 | tig0020703:+62584 | Msa1385020:three_prime_UTR |
| ATAACTCAAGAGAGAGAGAT+TGG | 0.433571 | tig0020703:-61145 | None:intergenic |
| TGTTAGCAGTGAATTAGAAA+TGG | 0.445208 | tig0020703:+61456 | Msa1385020:CDS |
| CACATGAAGGACACATAGTA+AGG | 0.448920 | tig0020703:-62363 | None:intergenic |
| AAGAGAAGAGAAGAAAGGTA+AGG | 0.451793 | tig0020703:-61089 | None:intergenic |
| AGGCTTTGTAACGTTGTTGT+TGG | 0.454137 | tig0020703:-61266 | None:intergenic |
| AATTTACAAACATAGAATAT+AGG | 0.457840 | tig0020703:-62679 | None:intergenic |
| GTGAACTATGAAAGGGTTAA+GGG | 0.460344 | tig0020703:+62585 | Msa1385020:three_prime_UTR |
| AAACATTAACAGAAGAGAAT+AGG | 0.467293 | tig0020703:+62263 | Msa1385020:CDS |
| AAGAAAGGTAAGGGAAGAGT+GGG | 0.469487 | tig0020703:-61079 | None:intergenic |
| GCTGAACCATCTTTAACGTT+GGG | 0.469771 | tig0020703:+61319 | Msa1385020:CDS |
| AAAGGAGGTGCAAGAATTGA+AGG | 0.482533 | tig0020703:+62294 | Msa1385020:CDS |
| AGCTGAACCATCTTTAACGT+TGG | 0.482898 | tig0020703:+61318 | Msa1385020:CDS |
| CTAAGCCTAGAATAAGTTGA+AGG | 0.488952 | tig0020703:-61210 | None:intergenic |
| GAAGAAAGGTAAGGGAAGAG+TGG | 0.493787 | tig0020703:-61080 | None:intergenic |
| TTGTTTCATCTTTCTCTAGT+GGG | 0.496061 | tig0020703:+61413 | Msa1385020:CDS |
| AAATGTATGTGAACTATGAA+AGG | 0.497564 | tig0020703:+62577 | Msa1385020:three_prime_UTR |
| TTCTTCATAGTAACTCTTGG+TGG | 0.498912 | tig0020703:-61347 | None:intergenic |
| AGGTGTTAGATTTAACTCTC+TGG | 0.498987 | tig0020703:-61742 | None:intergenic |
| TTCATCTTTCTCTAGTGGGA+GGG | 0.505690 | tig0020703:+61417 | Msa1385020:CDS |
| CACCTCGACAAGTTGAGGTC+TGG | 0.514656 | tig0020703:+61760 | Msa1385020:CDS |
| GTAAGGGTAGCTGCTGGCAT+AGG | 0.516800 | tig0020703:-62346 | None:intergenic |
| GTTGTTTCATCTTTCTCTAG+TGG | 0.516924 | tig0020703:+61412 | Msa1385020:CDS |
| AGGTTCTTCATAGTAACTCT+TGG | 0.520099 | tig0020703:-61350 | None:intergenic |
| AAGGGAAGAGAAGAGAAGAA+AGG | 0.520574 | tig0020703:-61094 | None:intergenic |
| GGTTCCAGAACCGTAGAGCC+AGG | 0.526669 | tig0020703:+61781 | Msa1385020:CDS |
| AATGTATGTGAACTATGAAA+GGG | 0.527889 | tig0020703:+62578 | Msa1385020:three_prime_UTR |
| TTTCATCTTTCTCTAGTGGG+AGG | 0.528407 | tig0020703:+61416 | Msa1385020:CDS |
| AGAGAAGAGAAGAAAGGTAA+GGG | 0.528734 | tig0020703:-61088 | None:intergenic |
| GTGAAGGGGTTGTAAAAGTG+AGG | 0.536068 | tig0020703:-62445 | None:intergenic |
| TTTGTAACGTTGTTGTTGGA+TGG | 0.545023 | tig0020703:-61262 | None:intergenic |
| GATAAACCCAACGTTAAAGA+TGG | 0.545369 | tig0020703:-61325 | None:intergenic |
| TGTTTAGGTACCTGGCTCTA+CGG | 0.545452 | tig0020703:-61791 | None:intergenic |
| AGAGAATAGGAGGCTACAAA+AGG | 0.550932 | tig0020703:+62276 | Msa1385020:CDS |
| GTAAACATGGATCTATATGA+AGG | 0.551801 | tig0020703:+62708 | Msa1385020:three_prime_UTR |
| AGAAATGGAAACGACGGAGA+TGG | 0.553541 | tig0020703:+61471 | Msa1385020:CDS |
| TGCTGGCATAGGCATATACA+AGG | 0.554332 | tig0020703:-62335 | None:intergenic |
| AAAGCTGAAGCAAACAGAAG+TGG | 0.566126 | tig0020703:+62213 | Msa1385020:CDS |
| GTAAATTACTATAGTAAACA+TGG | 0.567162 | tig0020703:+62695 | Msa1385020:three_prime_UTR |
| TGTGAGAGACTAGGTGGTGG+TGG | 0.571619 | tig0020703:+62382 | Msa1385020:CDS |
| TCTAACACCTCGACAAGTTG+AGG | 0.578186 | tig0020703:+61755 | Msa1385020:CDS |
| CATTAACAGAAGAGAATAGG+AGG | 0.587793 | tig0020703:+62266 | Msa1385020:CDS |
| ATAGTTGTTATGATTACTTG+AGG | 0.592747 | tig0020703:-61293 | None:intergenic |
| AAGACGGTGCCACTGCAGCT+AGG | 0.595899 | tig0020703:+61527 | Msa1385020:CDS |
| CCACCTAGTCTCTCACATGA+AGG | 0.597382 | tig0020703:-62376 | None:intergenic |
| AAGCTTCTTCCTAGCTGCAG+TGG | 0.601402 | tig0020703:-61536 | None:intergenic |
| CACATAGTAAGGGTAGCTGC+TGG | 0.601478 | tig0020703:-62352 | None:intergenic |
| CAAGATGCTAGTAACAACTC+AGG | 0.601537 | tig0020703:+61187 | Msa1385020:CDS |
| GTAACGTTGTTGTTGGATGG+TGG | 0.602624 | tig0020703:-61259 | None:intergenic |
| GAATAGGAGGCTACAAAAGG+AGG | 0.603538 | tig0020703:+62279 | Msa1385020:CDS |
| GGTGGTGGTGGTGTTAATGG+TGG | 0.605462 | tig0020703:+62394 | Msa1385020:CDS |
| TGCTGCTGAAGAATTTGTGA+AGG | 0.622725 | tig0020703:-62461 | None:intergenic |
| AACCAGACCTCAACTTGTCG+AGG | 0.626268 | tig0020703:-61762 | None:intergenic |
| TGAATTAGAAATGGAAACGA+CGG | 0.634393 | tig0020703:+61465 | Msa1385020:CDS |
| GCTGCTGAAGAATTTGTGAA+GGG | 0.658168 | tig0020703:-62460 | None:intergenic |
| ACATGAAGGACACATAGTAA+GGG | 0.658983 | tig0020703:-62362 | None:intergenic |
| CCTTCATGTGAGAGACTAGG+TGG | 0.665742 | tig0020703:+62376 | Msa1385020:CDS |
| GATGAAACAACGCTGTGATG+AGG | 0.669037 | tig0020703:-61400 | None:intergenic |
| TCATGTGAGAGACTAGGTGG+TGG | 0.669612 | tig0020703:+62379 | Msa1385020:CDS |
| ATCAGCGACGAAGATGAAGA+CGG | 0.679700 | tig0020703:+61511 | Msa1385020:CDS |
| TGTCCTTCATGTGAGAGACT+AGG | 0.681664 | tig0020703:+62373 | Msa1385020:CDS |
| CTGCTGAAGAATTTGTGAAG+GGG | 0.685286 | tig0020703:-62459 | None:intergenic |
| GCTGGCATAGGCATATACAA+GGG | 0.757470 | tig0020703:-62334 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTTGATAAATAAATG+AGG | - | tig0020703:61688-61707 | None:intergenic | 10.0% |
| !! | TTATGTATATATTTATGTTT+AGG | - | tig0020703:61809-61828 | None:intergenic | 10.0% |
| !!! | TGTTATATTAACATTATTTT+TGG | + | tig0020703:62166-62185 | Msa1385020:intron | 10.0% |
| !! | AAAAATTTGATAAATAAATG+AGG | - | tig0020703:61688-61707 | None:intergenic | 10.0% |
| !! | TTATGTATATATTTATGTTT+AGG | - | tig0020703:61809-61828 | None:intergenic | 10.0% |
| !!! | TGTTATATTAACATTATTTT+TGG | + | tig0020703:62166-62185 | Msa1385020:intron | 10.0% |
| !!! | TATTTATCAAATTTTTGTGA+TGG | + | tig0020703:61692-61711 | Msa1385020:intron | 15.0% |
| !! | AATTAAATTAAACTCAACTA+TGG | + | tig0020703:61849-61868 | Msa1385020:intron | 15.0% |
| !! | TATTATCTTCAGATTAATTA+AGG | + | tig0020703:61992-62011 | Msa1385020:intron | 15.0% |
| !! | ATTATCTTCAGATTAATTAA+GGG | + | tig0020703:61993-62012 | Msa1385020:intron | 15.0% |
| !! | GTACACATATTATAAATTAT+GGG | + | tig0020703:62119-62138 | Msa1385020:intron | 15.0% |
| !!! | TATTAACATTATTTTTGGTT+TGG | + | tig0020703:62171-62190 | Msa1385020:intron | 15.0% |
| !! | AATTTACAAACATAGAATAT+AGG | - | tig0020703:62682-62701 | None:intergenic | 15.0% |
| !!! | TATTTATCAAATTTTTGTGA+TGG | + | tig0020703:61692-61711 | Msa1385020:intron | 15.0% |
| !! | AATTAAATTAAACTCAACTA+TGG | + | tig0020703:61849-61868 | Msa1385020:intron | 15.0% |
| !! | TATTATCTTCAGATTAATTA+AGG | + | tig0020703:61992-62011 | Msa1385020:intron | 15.0% |
| !! | ATTATCTTCAGATTAATTAA+GGG | + | tig0020703:61993-62012 | Msa1385020:intron | 15.0% |
| !! | GTACACATATTATAAATTAT+GGG | + | tig0020703:62119-62138 | Msa1385020:intron | 15.0% |
| !!! | TATTAACATTATTTTTGGTT+TGG | + | tig0020703:62171-62190 | Msa1385020:intron | 15.0% |
| !! | AATTTACAAACATAGAATAT+AGG | - | tig0020703:62682-62701 | None:intergenic | 15.0% |
| !! | ATCTGAAGATAATATTTCAT+TGG | - | tig0020703:61986-62005 | None:intergenic | 20.0% |
| !! | ATTTCAATTCAACTTATTCT+GGG | - | tig0020703:62069-62088 | None:intergenic | 20.0% |
| !! | TATTTCAATTCAACTTATTC+TGG | - | tig0020703:62070-62089 | None:intergenic | 20.0% |
| !! | CGTACACATATTATAAATTA+TGG | + | tig0020703:62118-62137 | Msa1385020:intron | 20.0% |
| !!! | ATTATTTTTGGTTTGGATTT+TGG | + | tig0020703:62178-62197 | Msa1385020:intron | 20.0% |
| !!! | TTATTTTTGGTTTGGATTTT+GGG | + | tig0020703:62179-62198 | Msa1385020:intron | 20.0% |
| !!! | TTTGTATTTTTTTGGTTGAA+GGG | + | tig0020703:62554-62573 | Msa1385020:three_prime_UTR | 20.0% |
| !! | GTAAATTACTATAGTAAACA+TGG | + | tig0020703:62695-62714 | Msa1385020:three_prime_UTR | 20.0% |
| !! | ATCTGAAGATAATATTTCAT+TGG | - | tig0020703:61986-62005 | None:intergenic | 20.0% |
| !! | ATTTCAATTCAACTTATTCT+GGG | - | tig0020703:62069-62088 | None:intergenic | 20.0% |
| !! | TATTTCAATTCAACTTATTC+TGG | - | tig0020703:62070-62089 | None:intergenic | 20.0% |
| !! | CGTACACATATTATAAATTA+TGG | + | tig0020703:62118-62137 | Msa1385020:intron | 20.0% |
| !!! | ATTATTTTTGGTTTGGATTT+TGG | + | tig0020703:62178-62197 | Msa1385020:intron | 20.0% |
| !!! | TTATTTTTGGTTTGGATTTT+GGG | + | tig0020703:62179-62198 | Msa1385020:intron | 20.0% |
| !!! | TTTGTATTTTTTTGGTTGAA+GGG | + | tig0020703:62554-62573 | Msa1385020:three_prime_UTR | 20.0% |
| !! | GTAAATTACTATAGTAAACA+TGG | + | tig0020703:62695-62714 | Msa1385020:three_prime_UTR | 20.0% |
| !!! | TTTTTGTTTTGTGAAAGGAA+GGG | - | tig0020703:61115-61134 | None:intergenic | 25.0% |
| ! | TTATGATTACTTGAGGAATA+AGG | - | tig0020703:61289-61308 | None:intergenic | 25.0% |
| ! | ATAGTTGTTATGATTACTTG+AGG | - | tig0020703:61296-61315 | None:intergenic | 25.0% |
| ! | GAGATTATGATTATGATTAC+AGG | - | tig0020703:61625-61644 | None:intergenic | 25.0% |
| ! | TATATTTATGTTTAGGTACC+TGG | - | tig0020703:61802-61821 | None:intergenic | 25.0% |
| !!! | TCAACTATGGTTTTAAATTG+CGG | + | tig0020703:61862-61881 | Msa1385020:intron | 25.0% |
| ! | GGTGATATATGATATTTATG+TGG | - | tig0020703:62021-62040 | None:intergenic | 25.0% |
| ! | CCATTTACAATAGTATGTAT+GGG | - | tig0020703:62042-62061 | None:intergenic | 25.0% |
| ! | TCCATTTACAATAGTATGTA+TGG | - | tig0020703:62043-62062 | None:intergenic | 25.0% |
| ! | TACATACTATTGTAAATGGA+TGG | + | tig0020703:62043-62062 | Msa1385020:intron | 25.0% |
| ! | ATGTTTCACAACATTTCTTT+AGG | - | tig0020703:62249-62268 | None:intergenic | 25.0% |
| ! | AAACATTAACAGAAGAGAAT+AGG | + | tig0020703:62263-62282 | Msa1385020:CDS | 25.0% |
| ! | AAAAAATACAAAGGTTGTGT+GGG | - | tig0020703:62546-62565 | None:intergenic | 25.0% |
| ! | AAAAAAATACAAAGGTTGTG+TGG | - | tig0020703:62547-62566 | None:intergenic | 25.0% |
| !!! | ACACAACCTTTGTATTTTTT+TGG | + | tig0020703:62546-62565 | Msa1385020:three_prime_UTR | 25.0% |
| ! | CTTCAACCAAAAAAATACAA+AGG | - | tig0020703:62555-62574 | None:intergenic | 25.0% |
| !!! | CTTTGTATTTTTTTGGTTGA+AGG | + | tig0020703:62553-62572 | Msa1385020:three_prime_UTR | 25.0% |
| ! | AAATGTATGTGAACTATGAA+AGG | + | tig0020703:62577-62596 | Msa1385020:three_prime_UTR | 25.0% |
| ! | AATGTATGTGAACTATGAAA+GGG | + | tig0020703:62578-62597 | Msa1385020:three_prime_UTR | 25.0% |
| !!! | TCAATTGTTCATTTTTGTTG+TGG | + | tig0020703:62749-62768 | Msa1385020:three_prime_UTR | 25.0% |
| !!! | CAATTGTTCATTTTTGTTGT+GGG | + | tig0020703:62750-62769 | Msa1385020:three_prime_UTR | 25.0% |
| !!! | TTTTTGTTTTGTGAAAGGAA+GGG | - | tig0020703:61115-61134 | None:intergenic | 25.0% |
| ! | TTATGATTACTTGAGGAATA+AGG | - | tig0020703:61289-61308 | None:intergenic | 25.0% |
| ! | ATAGTTGTTATGATTACTTG+AGG | - | tig0020703:61296-61315 | None:intergenic | 25.0% |
| ! | GAGATTATGATTATGATTAC+AGG | - | tig0020703:61625-61644 | None:intergenic | 25.0% |
| ! | TATATTTATGTTTAGGTACC+TGG | - | tig0020703:61802-61821 | None:intergenic | 25.0% |
| !!! | TCAACTATGGTTTTAAATTG+CGG | + | tig0020703:61862-61881 | Msa1385020:intron | 25.0% |
| ! | GGTGATATATGATATTTATG+TGG | - | tig0020703:62021-62040 | None:intergenic | 25.0% |
| ! | CCATTTACAATAGTATGTAT+GGG | - | tig0020703:62042-62061 | None:intergenic | 25.0% |
| ! | TCCATTTACAATAGTATGTA+TGG | - | tig0020703:62043-62062 | None:intergenic | 25.0% |
| ! | TACATACTATTGTAAATGGA+TGG | + | tig0020703:62043-62062 | Msa1385020:intron | 25.0% |
| ! | ATGTTTCACAACATTTCTTT+AGG | - | tig0020703:62249-62268 | None:intergenic | 25.0% |
| ! | AAACATTAACAGAAGAGAAT+AGG | + | tig0020703:62263-62282 | Msa1385020:CDS | 25.0% |
| ! | AAAAAATACAAAGGTTGTGT+GGG | - | tig0020703:62546-62565 | None:intergenic | 25.0% |
| ! | AAAAAAATACAAAGGTTGTG+TGG | - | tig0020703:62547-62566 | None:intergenic | 25.0% |
| !!! | ACACAACCTTTGTATTTTTT+TGG | + | tig0020703:62546-62565 | Msa1385020:three_prime_UTR | 25.0% |
| ! | CTTCAACCAAAAAAATACAA+AGG | - | tig0020703:62555-62574 | None:intergenic | 25.0% |
| !!! | CTTTGTATTTTTTTGGTTGA+AGG | + | tig0020703:62553-62572 | Msa1385020:three_prime_UTR | 25.0% |
| ! | AAATGTATGTGAACTATGAA+AGG | + | tig0020703:62577-62596 | Msa1385020:three_prime_UTR | 25.0% |
| ! | AATGTATGTGAACTATGAAA+GGG | + | tig0020703:62578-62597 | Msa1385020:three_prime_UTR | 25.0% |
| !!! | TCAATTGTTCATTTTTGTTG+TGG | + | tig0020703:62749-62768 | Msa1385020:three_prime_UTR | 25.0% |
| !!! | GTTTTTGTTTTGTGAAAGGA+AGG | - | tig0020703:61116-61135 | None:intergenic | 30.0% |
| !!! | AGGTGTTTTTGTTTTGTGAA+AGG | - | tig0020703:61120-61139 | None:intergenic | 30.0% |
| GTTTGTGTAGAAAAATCAAG+AGG | - | tig0020703:61373-61392 | None:intergenic | 30.0% | |
| TTGTTTCATCTTTCTCTAGT+GGG | + | tig0020703:61413-61432 | Msa1385020:CDS | 30.0% | |
| TGTTAGCAGTGAATTAGAAA+TGG | + | tig0020703:61456-61475 | Msa1385020:CDS | 30.0% | |
| TGAATTAGAAATGGAAACGA+CGG | + | tig0020703:61465-61484 | Msa1385020:CDS | 30.0% | |
| ACTTATATTGCAGTACACAA+CGG | - | tig0020703:61956-61975 | None:intergenic | 30.0% | |
| CCCATACATACTATTGTAAA+TGG | + | tig0020703:62039-62058 | Msa1385020:intron | 30.0% | |
| CTTAGAGAAATTGCTCTTAT+TGG | - | tig0020703:62425-62444 | None:intergenic | 30.0% | |
| GTAAACATGGATCTATATGA+AGG | + | tig0020703:62708-62727 | Msa1385020:three_prime_UTR | 30.0% | |
| !!! | GTTTTTGTTTTGTGAAAGGA+AGG | - | tig0020703:61116-61135 | None:intergenic | 30.0% |
| !!! | AGGTGTTTTTGTTTTGTGAA+AGG | - | tig0020703:61120-61139 | None:intergenic | 30.0% |
| GTTTGTGTAGAAAAATCAAG+AGG | - | tig0020703:61373-61392 | None:intergenic | 30.0% | |
| TTGTTTCATCTTTCTCTAGT+GGG | + | tig0020703:61413-61432 | Msa1385020:CDS | 30.0% | |
| TGTTAGCAGTGAATTAGAAA+TGG | + | tig0020703:61456-61475 | Msa1385020:CDS | 30.0% | |
| TGAATTAGAAATGGAAACGA+CGG | + | tig0020703:61465-61484 | Msa1385020:CDS | 30.0% | |
| ACTTATATTGCAGTACACAA+CGG | - | tig0020703:61956-61975 | None:intergenic | 30.0% | |
| CCCATACATACTATTGTAAA+TGG | + | tig0020703:62039-62058 | Msa1385020:intron | 30.0% | |
| CTTAGAGAAATTGCTCTTAT+TGG | - | tig0020703:62425-62444 | None:intergenic | 30.0% | |
| GTAAACATGGATCTATATGA+AGG | + | tig0020703:62708-62727 | Msa1385020:three_prime_UTR | 30.0% | |
| AGAGAAGAGAAGAAAGGTAA+GGG | - | tig0020703:61091-61110 | None:intergenic | 35.0% | |
| AAGAGAAGAGAAGAAAGGTA+AGG | - | tig0020703:61092-61111 | None:intergenic | 35.0% | |
| ! | AGAGAGAGAGATTGGTAATA+AGG | - | tig0020703:61140-61159 | None:intergenic | 35.0% |
| ATAACTCAAGAGAGAGAGAT+TGG | - | tig0020703:61148-61167 | None:intergenic | 35.0% | |
| TCTCTCTTGAGTTATCTTGA+TGG | + | tig0020703:61153-61172 | Msa1385020:exon | 35.0% | |
| CTCTCTTGAGTTATCTTGAT+GGG | + | tig0020703:61154-61173 | Msa1385020:exon | 35.0% | |
| ! | CTAAGCCTAGAATAAGTTGA+AGG | - | tig0020703:61213-61232 | None:intergenic | 35.0% |
| ! | TTTGTAACGTTGTTGTTGGA+TGG | - | tig0020703:61265-61284 | None:intergenic | 35.0% |
| GATAAACCCAACGTTAAAGA+TGG | - | tig0020703:61328-61347 | None:intergenic | 35.0% | |
| TTCTTCATAGTAACTCTTGG+TGG | - | tig0020703:61350-61369 | None:intergenic | 35.0% | |
| AGGTTCTTCATAGTAACTCT+TGG | - | tig0020703:61353-61372 | None:intergenic | 35.0% | |
| ! | GTTGTTTCATCTTTCTCTAG+TGG | + | tig0020703:61412-61431 | Msa1385020:CDS | 35.0% |
| AAGCATAGCAGATTGATCTT+TGG | - | tig0020703:61569-61588 | None:intergenic | 35.0% | |
| AGGTGTTAGATTTAACTCTC+TGG | - | tig0020703:61745-61764 | None:intergenic | 35.0% | |
| ! | TAAATTGCGGTTGCAGTTTT+TGG | + | tig0020703:61875-61894 | Msa1385020:intron | 35.0% |
| CATTAACAGAAGAGAATAGG+AGG | + | tig0020703:62266-62285 | Msa1385020:CDS | 35.0% | |
| ACATGAAGGACACATAGTAA+GGG | - | tig0020703:62365-62384 | None:intergenic | 35.0% | |
| TGTGAACTATGAAAGGGTTA+AGG | + | tig0020703:62584-62603 | Msa1385020:three_prime_UTR | 35.0% | |
| GTGAACTATGAAAGGGTTAA+GGG | + | tig0020703:62585-62604 | Msa1385020:three_prime_UTR | 35.0% | |
| AGAGAAGAGAAGAAAGGTAA+GGG | - | tig0020703:61091-61110 | None:intergenic | 35.0% | |
| AAGAGAAGAGAAGAAAGGTA+AGG | - | tig0020703:61092-61111 | None:intergenic | 35.0% | |
| ! | AGAGAGAGAGATTGGTAATA+AGG | - | tig0020703:61140-61159 | None:intergenic | 35.0% |
| ATAACTCAAGAGAGAGAGAT+TGG | - | tig0020703:61148-61167 | None:intergenic | 35.0% | |
| TCTCTCTTGAGTTATCTTGA+TGG | + | tig0020703:61153-61172 | Msa1385020:exon | 35.0% | |
| CTCTCTTGAGTTATCTTGAT+GGG | + | tig0020703:61154-61173 | Msa1385020:exon | 35.0% | |
| ! | CTAAGCCTAGAATAAGTTGA+AGG | - | tig0020703:61213-61232 | None:intergenic | 35.0% |
| ! | TTTGTAACGTTGTTGTTGGA+TGG | - | tig0020703:61265-61284 | None:intergenic | 35.0% |
| GATAAACCCAACGTTAAAGA+TGG | - | tig0020703:61328-61347 | None:intergenic | 35.0% | |
| TTCTTCATAGTAACTCTTGG+TGG | - | tig0020703:61350-61369 | None:intergenic | 35.0% | |
| AGGTTCTTCATAGTAACTCT+TGG | - | tig0020703:61353-61372 | None:intergenic | 35.0% | |
| ! | GTTGTTTCATCTTTCTCTAG+TGG | + | tig0020703:61412-61431 | Msa1385020:CDS | 35.0% |
| AAGCATAGCAGATTGATCTT+TGG | - | tig0020703:61569-61588 | None:intergenic | 35.0% | |
| AGGTGTTAGATTTAACTCTC+TGG | - | tig0020703:61745-61764 | None:intergenic | 35.0% | |
| ! | TAAATTGCGGTTGCAGTTTT+TGG | + | tig0020703:61875-61894 | Msa1385020:intron | 35.0% |
| CATTAACAGAAGAGAATAGG+AGG | + | tig0020703:62266-62285 | Msa1385020:CDS | 35.0% | |
| ACATGAAGGACACATAGTAA+GGG | - | tig0020703:62365-62384 | None:intergenic | 35.0% | |
| TGTGAACTATGAAAGGGTTA+AGG | + | tig0020703:62584-62603 | Msa1385020:three_prime_UTR | 35.0% | |
| GTGAACTATGAAAGGGTTAA+GGG | + | tig0020703:62585-62604 | Msa1385020:three_prime_UTR | 35.0% | |
| AAGGGAAGAGAAGAGAAGAA+AGG | - | tig0020703:61097-61116 | None:intergenic | 40.0% | |
| CAAGATGCTAGTAACAACTC+AGG | + | tig0020703:61187-61206 | Msa1385020:CDS | 40.0% | |
| TCAGGCCTTCAACTTATTCT+AGG | + | tig0020703:61205-61224 | Msa1385020:CDS | 40.0% | |
| ! | AGGCTTTGTAACGTTGTTGT+TGG | - | tig0020703:61269-61288 | None:intergenic | 40.0% |
| AGCTGAACCATCTTTAACGT+TGG | + | tig0020703:61318-61337 | Msa1385020:CDS | 40.0% | |
| GCTGAACCATCTTTAACGTT+GGG | + | tig0020703:61319-61338 | Msa1385020:CDS | 40.0% | |
| TTTCATCTTTCTCTAGTGGG+AGG | + | tig0020703:61416-61435 | Msa1385020:CDS | 40.0% | |
| TTCATCTTTCTCTAGTGGGA+GGG | + | tig0020703:61417-61436 | Msa1385020:CDS | 40.0% | |
| AAAGCTGAAGCAAACAGAAG+TGG | + | tig0020703:62213-62232 | Msa1385020:CDS | 40.0% | |
| AGAGAATAGGAGGCTACAAA+AGG | + | tig0020703:62276-62295 | Msa1385020:CDS | 40.0% | |
| ! | AAAGGAGGTGCAAGAATTGA+AGG | + | tig0020703:62294-62313 | Msa1385020:CDS | 40.0% |
| CACATGAAGGACACATAGTA+AGG | - | tig0020703:62366-62385 | None:intergenic | 40.0% | |
| CTGCTGAAGAATTTGTGAAG+GGG | - | tig0020703:62462-62481 | None:intergenic | 40.0% | |
| GCTGCTGAAGAATTTGTGAA+GGG | - | tig0020703:62463-62482 | None:intergenic | 40.0% | |
| TGCTGCTGAAGAATTTGTGA+AGG | - | tig0020703:62464-62483 | None:intergenic | 40.0% | |
| AAGGGAAGAGAAGAGAAGAA+AGG | - | tig0020703:61097-61116 | None:intergenic | 40.0% | |
| CAAGATGCTAGTAACAACTC+AGG | + | tig0020703:61187-61206 | Msa1385020:CDS | 40.0% | |
| TCAGGCCTTCAACTTATTCT+AGG | + | tig0020703:61205-61224 | Msa1385020:CDS | 40.0% | |
| ! | AGGCTTTGTAACGTTGTTGT+TGG | - | tig0020703:61269-61288 | None:intergenic | 40.0% |
| AGCTGAACCATCTTTAACGT+TGG | + | tig0020703:61318-61337 | Msa1385020:CDS | 40.0% | |
| GCTGAACCATCTTTAACGTT+GGG | + | tig0020703:61319-61338 | Msa1385020:CDS | 40.0% | |
| TTTCATCTTTCTCTAGTGGG+AGG | + | tig0020703:61416-61435 | Msa1385020:CDS | 40.0% | |
| TTCATCTTTCTCTAGTGGGA+GGG | + | tig0020703:61417-61436 | Msa1385020:CDS | 40.0% | |
| AAAGCTGAAGCAAACAGAAG+TGG | + | tig0020703:62213-62232 | Msa1385020:CDS | 40.0% | |
| AGAGAATAGGAGGCTACAAA+AGG | + | tig0020703:62276-62295 | Msa1385020:CDS | 40.0% | |
| ! | AAAGGAGGTGCAAGAATTGA+AGG | + | tig0020703:62294-62313 | Msa1385020:CDS | 40.0% |
| CACATGAAGGACACATAGTA+AGG | - | tig0020703:62366-62385 | None:intergenic | 40.0% | |
| CTGCTGAAGAATTTGTGAAG+GGG | - | tig0020703:62462-62481 | None:intergenic | 40.0% | |
| GCTGCTGAAGAATTTGTGAA+GGG | - | tig0020703:62463-62482 | None:intergenic | 40.0% | |
| TGCTGCTGAAGAATTTGTGA+AGG | - | tig0020703:62464-62483 | None:intergenic | 40.0% | |
| GAAGAAAGGTAAGGGAAGAG+TGG | - | tig0020703:61083-61102 | None:intergenic | 45.0% | |
| ! | GTAACGTTGTTGTTGGATGG+TGG | - | tig0020703:61262-61281 | None:intergenic | 45.0% |
| GATGAAACAACGCTGTGATG+AGG | - | tig0020703:61403-61422 | None:intergenic | 45.0% | |
| AGAAATGGAAACGACGGAGA+TGG | + | tig0020703:61471-61490 | Msa1385020:CDS | 45.0% | |
| ATCAGCGACGAAGATGAAGA+CGG | + | tig0020703:61511-61530 | Msa1385020:CDS | 45.0% | |
| TCTAACACCTCGACAAGTTG+AGG | + | tig0020703:61755-61774 | Msa1385020:CDS | 45.0% | |
| !! | TGTTTAGGTACCTGGCTCTA+CGG | - | tig0020703:61794-61813 | None:intergenic | 45.0% |
| !! | ATTGCGGTTGCAGTTTTTGG+TGG | + | tig0020703:61878-61897 | Msa1385020:intron | 45.0% |
| ! | GCAGTACACAACGGTTTTTG+AGG | - | tig0020703:61947-61966 | None:intergenic | 45.0% |
| GAATAGGAGGCTACAAAAGG+AGG | + | tig0020703:62279-62298 | Msa1385020:CDS | 45.0% | |
| GCTGGCATAGGCATATACAA+GGG | - | tig0020703:62337-62356 | None:intergenic | 45.0% | |
| TGCTGGCATAGGCATATACA+AGG | - | tig0020703:62338-62357 | None:intergenic | 45.0% | |
| TGTCCTTCATGTGAGAGACT+AGG | + | tig0020703:62373-62392 | Msa1385020:CDS | 45.0% | |
| GTGAAGGGGTTGTAAAAGTG+AGG | - | tig0020703:62448-62467 | None:intergenic | 45.0% | |
| GAAGAAAGGTAAGGGAAGAG+TGG | - | tig0020703:61083-61102 | None:intergenic | 45.0% | |
| ! | GTAACGTTGTTGTTGGATGG+TGG | - | tig0020703:61262-61281 | None:intergenic | 45.0% |
| GATGAAACAACGCTGTGATG+AGG | - | tig0020703:61403-61422 | None:intergenic | 45.0% | |
| AGAAATGGAAACGACGGAGA+TGG | + | tig0020703:61471-61490 | Msa1385020:CDS | 45.0% | |
| ATCAGCGACGAAGATGAAGA+CGG | + | tig0020703:61511-61530 | Msa1385020:CDS | 45.0% | |
| TCTAACACCTCGACAAGTTG+AGG | + | tig0020703:61755-61774 | Msa1385020:CDS | 45.0% | |
| !! | TGTTTAGGTACCTGGCTCTA+CGG | - | tig0020703:61794-61813 | None:intergenic | 45.0% |
| !! | ATTGCGGTTGCAGTTTTTGG+TGG | + | tig0020703:61878-61897 | Msa1385020:intron | 45.0% |
| ! | GCAGTACACAACGGTTTTTG+AGG | - | tig0020703:61947-61966 | None:intergenic | 45.0% |
| GAATAGGAGGCTACAAAAGG+AGG | + | tig0020703:62279-62298 | Msa1385020:CDS | 45.0% | |
| GCTGGCATAGGCATATACAA+GGG | - | tig0020703:62337-62356 | None:intergenic | 45.0% | |
| TGCTGGCATAGGCATATACA+AGG | - | tig0020703:62338-62357 | None:intergenic | 45.0% | |
| TGTCCTTCATGTGAGAGACT+AGG | + | tig0020703:62373-62392 | Msa1385020:CDS | 45.0% | |
| GTGAAGGGGTTGTAAAAGTG+AGG | - | tig0020703:62448-62467 | None:intergenic | 45.0% | |
| ! | GGATGGTGGTGTGTCTTGTT+TGG | - | tig0020703:61248-61267 | None:intergenic | 50.0% |
| AAGCTTCTTCCTAGCTGCAG+TGG | - | tig0020703:61539-61558 | None:intergenic | 50.0% | |
| AACCAGACCTCAACTTGTCG+AGG | - | tig0020703:61765-61784 | None:intergenic | 50.0% | |
| CACATAGTAAGGGTAGCTGC+TGG | - | tig0020703:62355-62374 | None:intergenic | 50.0% | |
| CCACCTAGTCTCTCACATGA+AGG | - | tig0020703:62379-62398 | None:intergenic | 50.0% | |
| CCTTCATGTGAGAGACTAGG+TGG | + | tig0020703:62376-62395 | Msa1385020:CDS | 50.0% | |
| TCATGTGAGAGACTAGGTGG+TGG | + | tig0020703:62379-62398 | Msa1385020:CDS | 50.0% | |
| !! | CTAGGTGGTGGTGGTGTTAA+TGG | + | tig0020703:62391-62410 | Msa1385020:CDS | 50.0% |
| ! | GGATGGTGGTGTGTCTTGTT+TGG | - | tig0020703:61248-61267 | None:intergenic | 50.0% |
| AAGCTTCTTCCTAGCTGCAG+TGG | - | tig0020703:61539-61558 | None:intergenic | 50.0% | |
| AACCAGACCTCAACTTGTCG+AGG | - | tig0020703:61765-61784 | None:intergenic | 50.0% | |
| CACATAGTAAGGGTAGCTGC+TGG | - | tig0020703:62355-62374 | None:intergenic | 50.0% | |
| CCACCTAGTCTCTCACATGA+AGG | - | tig0020703:62379-62398 | None:intergenic | 50.0% | |
| CCTTCATGTGAGAGACTAGG+TGG | + | tig0020703:62376-62395 | Msa1385020:CDS | 50.0% | |
| TCATGTGAGAGACTAGGTGG+TGG | + | tig0020703:62379-62398 | Msa1385020:CDS | 50.0% | |
| !! | CTAGGTGGTGGTGGTGTTAA+TGG | + | tig0020703:62391-62410 | Msa1385020:CDS | 50.0% |
| ! | CACCTCGACAAGTTGAGGTC+TGG | + | tig0020703:61760-61779 | Msa1385020:CDS | 55.0% |
| GTAAGGGTAGCTGCTGGCAT+AGG | - | tig0020703:62349-62368 | None:intergenic | 55.0% | |
| ! | TGTGAGAGACTAGGTGGTGG+TGG | + | tig0020703:62382-62401 | Msa1385020:CDS | 55.0% |
| !! | GGTGGTGGTGGTGTTAATGG+TGG | + | tig0020703:62394-62413 | Msa1385020:CDS | 55.0% |
| ! | CACCTCGACAAGTTGAGGTC+TGG | + | tig0020703:61760-61779 | Msa1385020:CDS | 55.0% |
| GTAAGGGTAGCTGCTGGCAT+AGG | - | tig0020703:62349-62368 | None:intergenic | 55.0% | |
| ! | TGTGAGAGACTAGGTGGTGG+TGG | + | tig0020703:62382-62401 | Msa1385020:CDS | 55.0% |
| !! | GGTGGTGGTGGTGTTAATGG+TGG | + | tig0020703:62394-62413 | Msa1385020:CDS | 55.0% |
| !! | AAGACGGTGCCACTGCAGCT+AGG | + | tig0020703:61527-61546 | Msa1385020:CDS | 60.0% |
| GGTTCCAGAACCGTAGAGCC+AGG | + | tig0020703:61781-61800 | Msa1385020:CDS | 60.0% | |
| !! | GGTACCTGGCTCTACGGTTC+TGG | - | tig0020703:61788-61807 | None:intergenic | 60.0% |
| !! | AAGACGGTGCCACTGCAGCT+AGG | + | tig0020703:61527-61546 | Msa1385020:CDS | 60.0% |
| GGTTCCAGAACCGTAGAGCC+AGG | + | tig0020703:61781-61800 | Msa1385020:CDS | 60.0% | |
| !! | GGTACCTGGCTCTACGGTTC+TGG | - | tig0020703:61788-61807 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020703 | gene | 61080 | 62772 | 61080 | ID=Msa1385020;Name=Msa1385020 |
| tig0020703 | mRNA | 61080 | 62772 | 61080 | ID=Msa1385020-mRNA-1;Parent=Msa1385020;Name=Msa1385020-mRNA-1;_AED=0.07;_eAED=0.07;_QI=92|1|1|1|1|1|3|283|270 |
| tig0020703 | exon | 61080 | 61624 | 61080 | ID=Msa1385020-mRNA-1:exon:9389;Parent=Msa1385020-mRNA-1 |
| tig0020703 | exon | 61723 | 61802 | 61723 | ID=Msa1385020-mRNA-1:exon:9390;Parent=Msa1385020-mRNA-1 |
| tig0020703 | exon | 62210 | 62772 | 62210 | ID=Msa1385020-mRNA-1:exon:9391;Parent=Msa1385020-mRNA-1 |
| tig0020703 | five_prime_UTR | 61080 | 61171 | 61080 | ID=Msa1385020-mRNA-1:five_prime_utr;Parent=Msa1385020-mRNA-1 |
| tig0020703 | CDS | 61172 | 61624 | 61172 | ID=Msa1385020-mRNA-1:cds;Parent=Msa1385020-mRNA-1 |
| tig0020703 | CDS | 61723 | 61802 | 61723 | ID=Msa1385020-mRNA-1:cds;Parent=Msa1385020-mRNA-1 |
| tig0020703 | CDS | 62210 | 62489 | 62210 | ID=Msa1385020-mRNA-1:cds;Parent=Msa1385020-mRNA-1 |
| tig0020703 | three_prime_UTR | 62490 | 62772 | 62490 | ID=Msa1385020-mRNA-1:three_prime_utr;Parent=Msa1385020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
