Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1205390 | XP_013457515.1 | 98.524 | 271 | 3 | 1 | 1 | 270 | 1 | 271 | 0.0 | 550 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1205390 | sp|P46604|HAT22_ARATH | 61.806 | 288 | 82 | 9 | 1 | 270 | 1 | 278 | 2.57e-90 | 271 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|---|---|
Msa1205390 | TF | HB-HD-ZIP |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006510 | Msa1205390 | 0.813240 | 2.828959e-51 | -8.615850e-47 |
Msa0029850 | Msa1205390 | 0.824355 | 8.443215e-54 | -8.615850e-47 |
Msa0038720 | Msa1205390 | 0.800050 | 1.728641e-48 | -8.615850e-47 |
Msa0042550 | Msa1205390 | 0.854134 | 1.506990e-61 | -8.615850e-47 |
Msa0055070 | Msa1205390 | 0.838786 | 2.338495e-57 | -8.615850e-47 |
Msa0058600 | Msa1205390 | 0.804358 | 2.244183e-49 | -8.615850e-47 |
Msa0076700 | Msa1205390 | 0.809034 | 2.310222e-50 | -8.615850e-47 |
Msa0077180 | Msa1205390 | 0.807634 | 4.592194e-50 | -8.615850e-47 |
Msa0084720 | Msa1205390 | 0.819773 | 9.739235e-53 | -8.615850e-47 |
Msa0085720 | Msa1205390 | 0.822527 | 2.258600e-53 | -8.615850e-47 |
Msa0101020 | Msa1205390 | 0.839065 | 1.979571e-57 | -8.615850e-47 |
Msa0613460 | Msa1205390 | 0.807580 | 4.715182e-50 | -8.615850e-47 |
Msa0615340 | Msa1205390 | 0.813066 | 3.088956e-51 | -8.615850e-47 |
Msa0622170 | Msa1205390 | -0.814641 | 1.389462e-51 | -8.615850e-47 |
Msa0622600 | Msa1205390 | 0.818990 | 1.469200e-52 | -8.615850e-47 |
Msa0626990 | Msa1205390 | 0.834302 | 3.241371e-56 | -8.615850e-47 |
Msa0627350 | Msa1205390 | 0.832361 | 9.876873e-56 | -8.615850e-47 |
Msa0653440 | Msa1205390 | 0.837734 | 4.364033e-57 | -8.615850e-47 |
Msa0653660 | Msa1205390 | 0.805753 | 1.146616e-49 | -8.615850e-47 |
Msa0662570 | Msa1205390 | 0.800651 | 1.304303e-48 | -8.615850e-47 |
Msa0667740 | Msa1205390 | 0.800439 | 1.440613e-48 | -8.615850e-47 |
Msa0679550 | Msa1205390 | 0.825113 | 5.596241e-54 | -8.615850e-47 |
Msa0695870 | Msa1205390 | 0.849680 | 2.768339e-60 | -8.615850e-47 |
Msa0698440 | Msa1205390 | 0.809613 | 1.735383e-50 | -8.615850e-47 |
Msa0698930 | Msa1205390 | 0.804466 | 2.131297e-49 | -8.615850e-47 |
Msa0731180 | Msa1205390 | 0.813429 | 2.571039e-51 | -8.615850e-47 |
Msa0773310 | Msa1205390 | 0.834419 | 3.030627e-56 | -8.615850e-47 |
Msa0787580 | Msa1205390 | -0.805652 | 1.203820e-49 | -8.615850e-47 |
Msa0796960 | Msa1205390 | 0.818996 | 1.464403e-52 | -8.615850e-47 |
Msa0800770 | Msa1205390 | 0.817672 | 2.920036e-52 | -8.615850e-47 |
Msa0801730 | Msa1205390 | 0.800192 | 1.617094e-48 | -8.615850e-47 |
Msa0807030 | Msa1205390 | 0.811910 | 5.526218e-51 | -8.615850e-47 |
Msa0810760 | Msa1205390 | 0.833809 | 4.307832e-56 | -8.615850e-47 |
Msa0818110 | Msa1205390 | 0.829017 | 6.512842e-55 | -8.615850e-47 |
Msa0831850 | Msa1205390 | 0.800328 | 1.517343e-48 | -8.615850e-47 |
Msa0838930 | Msa1205390 | 0.817213 | 3.705055e-52 | -8.615850e-47 |
Msa0124550 | Msa1205390 | 0.809540 | 1.799228e-50 | -8.615850e-47 |
Msa0142280 | Msa1205390 | 0.817100 | 3.929298e-52 | -8.615850e-47 |
Msa0145110 | Msa1205390 | 0.819485 | 1.133350e-52 | -8.615850e-47 |
Msa0169820 | Msa1205390 | 0.835288 | 1.830764e-56 | -8.615850e-47 |
Msa0175050 | Msa1205390 | 0.856755 | 2.595409e-62 | -8.615850e-47 |
Msa0178510 | Msa1205390 | 0.853208 | 2.781687e-61 | -8.615850e-47 |
Msa0183010 | Msa1205390 | -0.813223 | 2.854287e-51 | -8.615850e-47 |
Msa0187830 | Msa1205390 | 0.864880 | 8.839824e-65 | -8.615850e-47 |
Msa0188050 | Msa1205390 | 0.826719 | 2.324674e-54 | -8.615850e-47 |
Msa0190530 | Msa1205390 | 0.820341 | 7.218364e-53 | -8.615850e-47 |
Msa0193540 | Msa1205390 | 0.804697 | 1.907232e-49 | -8.615850e-47 |
Msa0194010 | Msa1205390 | 0.819934 | 8.946899e-53 | -8.615850e-47 |
Msa0220490 | Msa1205390 | 0.800767 | 1.234907e-48 | -8.615850e-47 |
Msa0226180 | Msa1205390 | 0.800483 | 1.411016e-48 | -8.615850e-47 |
Msa0229590 | Msa1205390 | 0.801553 | 8.529845e-49 | -8.615850e-47 |
Msa0230640 | Msa1205390 | -0.804672 | 1.930463e-49 | -8.615850e-47 |
Msa0235880 | Msa1205390 | 0.827747 | 1.319105e-54 | -8.615850e-47 |
Msa0388030 | Msa1205390 | -0.800926 | 1.145733e-48 | -8.615850e-47 |
Msa0393620 | Msa1205390 | 0.801910 | 7.204137e-49 | -8.615850e-47 |
Msa0394470 | Msa1205390 | 0.801772 | 7.690936e-49 | -8.615850e-47 |
Msa0409200 | Msa1205390 | 0.803083 | 4.129457e-49 | -8.615850e-47 |
Msa0422180 | Msa1205390 | 0.816813 | 4.556504e-52 | -8.615850e-47 |
Msa0429090 | Msa1205390 | 0.815348 | 9.678163e-52 | -8.615850e-47 |
Msa0433410 | Msa1205390 | -0.806531 | 7.862390e-50 | -8.615850e-47 |
Msa0469940 | Msa1205390 | -0.813367 | 2.652702e-51 | -8.615850e-47 |
Msa0482180 | Msa1205390 | 0.802602 | 5.191077e-49 | -8.615850e-47 |
Msa0981040 | Msa1205390 | 0.805039 | 1.618302e-49 | -8.615850e-47 |
Msa1003990 | Msa1205390 | 0.803294 | 3.733351e-49 | -8.615850e-47 |
Msa1021510 | Msa1205390 | 0.810430 | 1.157062e-50 | -8.615850e-47 |
Msa1026940 | Msa1205390 | 0.805513 | 1.287156e-49 | -8.615850e-47 |
Msa1033780 | Msa1205390 | 0.819927 | 8.982575e-53 | -8.615850e-47 |
Msa1039710 | Msa1205390 | -0.824341 | 8.506784e-54 | -8.615850e-47 |
Msa1050740 | Msa1205390 | 0.821251 | 4.460283e-53 | -8.615850e-47 |
Msa1073660 | Msa1205390 | 0.806512 | 7.934880e-50 | -8.615850e-47 |
Msa1077340 | Msa1205390 | 0.829807 | 4.186314e-55 | -8.615850e-47 |
Msa1098250 | Msa1205390 | 0.804775 | 1.837611e-49 | -8.615850e-47 |
Msa1098270 | Msa1205390 | 0.819519 | 1.113121e-52 | -8.615850e-47 |
Msa1105500 | Msa1205390 | 0.803099 | 4.097384e-49 | -8.615850e-47 |
Msa0239690 | Msa1205390 | 0.824585 | 7.451989e-54 | -8.615850e-47 |
Msa0240270 | Msa1205390 | 0.811892 | 5.576729e-51 | -8.615850e-47 |
Msa0244140 | Msa1205390 | 0.811617 | 6.400854e-51 | -8.615850e-47 |
Msa0244190 | Msa1205390 | 0.807879 | 4.074519e-50 | -8.615850e-47 |
Msa0278900 | Msa1205390 | 0.808384 | 3.180787e-50 | -8.615850e-47 |
Msa0284450 | Msa1205390 | 0.800794 | 1.219236e-48 | -8.615850e-47 |
Msa0299060 | Msa1205390 | 0.817698 | 2.881927e-52 | -8.615850e-47 |
Msa0305190 | Msa1205390 | 0.803598 | 3.229875e-49 | -8.615850e-47 |
Msa0308460 | Msa1205390 | 0.800149 | 1.649966e-48 | -8.615850e-47 |
Msa0311470 | Msa1205390 | 0.803353 | 3.630717e-49 | -8.615850e-47 |
Msa0314060 | Msa1205390 | 0.804245 | 2.369554e-49 | -8.615850e-47 |
Msa0322680 | Msa1205390 | 0.813590 | 2.369605e-51 | -8.615850e-47 |
Msa0338730 | Msa1205390 | -0.801415 | 9.101629e-49 | -8.615850e-47 |
Msa0342070 | Msa1205390 | 0.874622 | 5.847051e-68 | -8.615850e-47 |
Msa0344690 | Msa1205390 | -0.814173 | 1.762610e-51 | -8.615850e-47 |
Msa1115280 | Msa1205390 | 0.827919 | 1.198756e-54 | -8.615850e-47 |
Msa1118760 | Msa1205390 | 0.828951 | 6.758023e-55 | -8.615850e-47 |
Msa1138280 | Msa1205390 | 0.821175 | 4.641936e-53 | -8.615850e-47 |
Msa1143020 | Msa1205390 | 0.818384 | 2.016364e-52 | -8.615850e-47 |
Msa1144720 | Msa1205390 | -0.801210 | 1.002648e-48 | -8.615850e-47 |
Msa1163590 | Msa1205390 | -0.802401 | 5.708673e-49 | -8.615850e-47 |
Msa1174310 | Msa1205390 | 0.818584 | 1.816258e-52 | -8.615850e-47 |
Msa1177780 | Msa1205390 | 0.826859 | 2.152964e-54 | -8.615850e-47 |
Msa1182130 | Msa1205390 | 0.829765 | 4.287038e-55 | -8.615850e-47 |
Msa1202750 | Msa1205390 | 0.810467 | 1.136241e-50 | -8.615850e-47 |
Msa1205390 | Msa1207350 | 0.816006 | 6.906722e-52 | -8.615850e-47 |
Msa1205390 | Msa1222280 | 0.828888 | 6.999504e-55 | -8.615850e-47 |
Msa1205390 | Msa1224200 | 0.808857 | 2.520681e-50 | -8.615850e-47 |
Msa1205390 | Msa1229610 | 0.827097 | 1.888508e-54 | -8.615850e-47 |
Msa1205390 | Msa1230830 | 0.813787 | 2.144983e-51 | -8.615850e-47 |
Msa1205390 | Msa1235400 | 0.822027 | 2.949817e-53 | -8.615850e-47 |
Msa1205390 | Msa1243100 | 0.810390 | 1.180474e-50 | -8.615850e-47 |
Msa1205390 | Msa1244930 | 0.803907 | 2.786102e-49 | -8.615850e-47 |
Msa1205390 | Msa1250310 | 0.878040 | 3.871318e-69 | -8.615850e-47 |
Msa1205390 | Msa1255060 | 0.815573 | 8.627979e-52 | -8.615850e-47 |
Msa1205390 | Msa1256410 | 0.805589 | 1.241164e-49 | -8.615850e-47 |
Msa1205390 | Msa1262990 | -0.806232 | 9.092645e-50 | -8.615850e-47 |
Msa1205390 | Msa1264860 | -0.811330 | 7.390893e-51 | -8.615850e-47 |
Msa1205390 | Msa1270660 | 0.801083 | 1.064614e-48 | -8.615850e-47 |
Msa1205390 | Msa1270730 | 0.802712 | 4.925917e-49 | -8.615850e-47 |
Msa1205390 | Msa1272320 | 0.816582 | 5.135554e-52 | -8.615850e-47 |
Msa1205390 | Msa1295510 | 0.800025 | 1.749140e-48 | -8.615850e-47 |
Msa1205390 | Msa1297310 | 0.970841 | 3.108148e-132 | -8.615850e-47 |
Msa1205390 | Msa1301720 | 0.816700 | 4.831188e-52 | -8.615850e-47 |
Msa1205390 | Msa1304890 | -0.818191 | 2.229434e-52 | -8.615850e-47 |
Msa1205390 | Msa1310220 | 0.834004 | 3.851584e-56 | -8.615850e-47 |
Msa1205390 | Msa1311340 | 0.803738 | 3.021271e-49 | -8.615850e-47 |
Msa1205390 | Msa1314770 | 0.826671 | 2.386971e-54 | -8.615850e-47 |
Msa1205390 | Msa1322200 | 0.825426 | 4.718071e-54 | -8.615850e-47 |
Msa1205390 | Msa1335230 | 0.814831 | 1.260649e-51 | -8.615850e-47 |
Msa1205390 | Msa1343250 | 0.832588 | 8.678882e-56 | -8.615850e-47 |
Msa1205390 | Msa1352540 | -0.801260 | 9.791269e-49 | -8.615850e-47 |
Msa1205390 | Msa1360240 | 0.801769 | 7.701016e-49 | -8.615850e-47 |
Msa1205390 | Msa1372150 | 0.851382 | 9.202292e-61 | -8.615850e-47 |
Msa1205390 | Msa1376930 | 0.839383 | 1.637791e-57 | -8.615850e-47 |
Msa1205390 | Msa1378230 | 0.806652 | 7.413704e-50 | -8.615850e-47 |
Msa1205390 | Msa1385020 | 0.969915 | 7.882485e-131 | -8.615850e-47 |
Msa1205390 | Msa1394310 | 0.816044 | 6.772030e-52 | -8.615850e-47 |
Msa1205390 | Msa1398890 | 0.801309 | 9.569721e-49 | -8.615850e-47 |
Msa1205390 | Msa1401140 | 0.800207 | 1.606268e-48 | -8.615850e-47 |
Msa1205390 | Msa1407650 | 0.805654 | 1.202355e-49 | -8.615850e-47 |
Msa1205390 | Msa1408180 | 0.800431 | 1.445614e-48 | -8.615850e-47 |
Msa1205390 | Msa1415360 | 0.806290 | 8.836371e-50 | -8.615850e-47 |
Msa1205390 | Msa1423820 | 0.827935 | 1.188492e-54 | -8.615850e-47 |
Msa1205390 | Msa1424630 | 0.855573 | 5.762026e-62 | -8.615850e-47 |
Msa1205390 | Msa1440940 | 0.820216 | 7.710672e-53 | -8.615850e-47 |
Msa1205390 | Msa1448980 | 0.801999 | 6.906928e-49 | -8.615850e-47 |
Msa1205390 | Msa1458510 | 0.829786 | 4.236875e-55 | -8.615850e-47 |
Msa0485490 | Msa1205390 | 0.853931 | 1.724405e-61 | -8.615850e-47 |
Msa0523910 | Msa1205390 | 0.803681 | 3.104227e-49 | -8.615850e-47 |
Msa0525610 | Msa1205390 | 0.858746 | 6.666931e-63 | -8.615850e-47 |
Msa0526070 | Msa1205390 | -0.825700 | 4.063127e-54 | -8.615850e-47 |
Msa0526100 | Msa1205390 | -0.807331 | 5.326223e-50 | -8.615850e-47 |
Msa0530650 | Msa1205390 | 0.836991 | 6.761618e-57 | -8.615850e-47 |
Msa0557410 | Msa1205390 | 0.803113 | 4.070437e-49 | -8.615850e-47 |
Msa0572480 | Msa1205390 | 0.807156 | 5.801099e-50 | -8.615850e-47 |
Msa0574850 | Msa1205390 | 0.817073 | 3.984527e-52 | -8.615850e-47 |
Msa0580000 | Msa1205390 | 0.801146 | 1.033448e-48 | -8.615850e-47 |
Msa0587190 | Msa1205390 | 0.832776 | 7.792948e-56 | -8.615850e-47 |
Msa0870060 | Msa1205390 | 0.822097 | 2.842384e-53 | -8.615850e-47 |
Msa0874630 | Msa1205390 | 0.878793 | 2.105813e-69 | -8.615850e-47 |
Msa0876360 | Msa1205390 | 0.809238 | 2.088655e-50 | -8.615850e-47 |
Msa0881160 | Msa1205390 | 0.817147 | 3.834202e-52 | -8.615850e-47 |
Msa0925870 | Msa1205390 | 0.838371 | 2.991759e-57 | -8.615850e-47 |
Msa0935770 | Msa1205390 | 0.820641 | 6.161972e-53 | -8.615850e-47 |
Msa0968150 | Msa1205390 | 0.817312 | 3.520175e-52 | -8.615850e-47 |
Msa0972810 | Msa1205390 | 0.805405 | 1.356503e-49 | -8.615850e-47 |
Msa0976290 | Msa1205390 | 0.844914 | 5.626417e-59 | -8.615850e-47 |
Msa0978700 | Msa1205390 | 0.813212 | 2.869962e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1205390 | MtrunA17_Chr4g0054421 | 98.524 | 271 | 3 | 1 | 1 | 270 | 1 | 271 | 0.0 | 550 |
Msa1205390 | MtrunA17_Chr5g0400781 | 63.860 | 285 | 73 | 8 | 1 | 270 | 1 | 270 | 1.00e-102 | 300 |
Msa1205390 | MtrunA17_Chr1g0175651 | 62.963 | 189 | 48 | 4 | 68 | 255 | 116 | 283 | 2.86e-72 | 223 |
Msa1205390 | MtrunA17_Chr2g0308611 | 76.119 | 134 | 31 | 1 | 108 | 240 | 180 | 313 | 1.41e-67 | 213 |
Msa1205390 | MtrunA17_Chr7g0258831 | 76.984 | 126 | 27 | 1 | 115 | 240 | 150 | 273 | 8.49e-66 | 207 |
Msa1205390 | MtrunA17_Chr5g0399491 | 68.293 | 164 | 42 | 4 | 79 | 240 | 95 | 250 | 2.27e-65 | 206 |
Msa1205390 | MtrunA17_Chr1g0151971 | 45.847 | 301 | 114 | 9 | 5 | 270 | 2 | 288 | 6.10e-65 | 204 |
Msa1205390 | MtrunA17_Chr4g0055851 | 66.667 | 162 | 41 | 2 | 80 | 240 | 85 | 234 | 7.91e-65 | 204 |
Msa1205390 | MtrunA17_Chr8g0335131 | 82.456 | 114 | 19 | 1 | 126 | 238 | 145 | 258 | 6.04e-62 | 197 |
Msa1205390 | MtrunA17_Chr3g0135331 | 54.124 | 194 | 64 | 6 | 90 | 268 | 117 | 300 | 5.65e-50 | 166 |
Msa1205390 | MtrunA17_Chr4g0044091 | 63.866 | 119 | 37 | 1 | 126 | 238 | 64 | 182 | 8.02e-49 | 160 |
Msa1205390 | MtrunA17_Chr2g0299031 | 44.211 | 190 | 93 | 4 | 54 | 239 | 15 | 195 | 1.08e-39 | 137 |
Msa1205390 | MtrunA17_Chr4g0071411 | 59.649 | 114 | 42 | 2 | 129 | 238 | 90 | 203 | 3.06e-35 | 125 |
Msa1205390 | MtrunA17_Chr5g0416391 | 47.664 | 107 | 54 | 1 | 114 | 218 | 62 | 168 | 3.38e-21 | 90.5 |
Msa1205390 | MtrunA17_Chr7g0265521 | 42.991 | 107 | 61 | 0 | 108 | 214 | 44 | 150 | 1.33e-20 | 87.8 |
Msa1205390 | MtrunA17_Chr3g0119291 | 35.417 | 192 | 112 | 5 | 80 | 261 | 12 | 201 | 2.78e-20 | 87.4 |
Msa1205390 | MtrunA17_Chr8g0362151 | 42.735 | 117 | 64 | 1 | 102 | 218 | 55 | 168 | 8.95e-20 | 86.7 |
Msa1205390 | MtrunA17_Chr7g0217111 | 46.602 | 103 | 51 | 1 | 118 | 216 | 71 | 173 | 4.08e-19 | 84.3 |
Msa1205390 | MtrunA17_Chr6g0450991 | 50.000 | 88 | 44 | 0 | 127 | 214 | 67 | 154 | 5.83e-19 | 84.3 |
Msa1205390 | MtrunA17_Chr4g0060031 | 45.455 | 99 | 54 | 0 | 116 | 214 | 84 | 182 | 1.99e-17 | 80.9 |
Msa1205390 | MtrunA17_Chr8g0381741 | 47.170 | 106 | 47 | 2 | 118 | 214 | 43 | 148 | 2.59e-17 | 80.1 |
Msa1205390 | MtrunA17_Chr3g0123691 | 37.975 | 158 | 85 | 5 | 119 | 265 | 52 | 207 | 2.86e-17 | 79.7 |
Msa1205390 | MtrunA17_Chr1g0179581 | 48.193 | 83 | 43 | 0 | 127 | 209 | 28 | 110 | 3.12e-17 | 75.5 |
Msa1205390 | MtrunA17_Chr6g0453021 | 45.192 | 104 | 49 | 2 | 118 | 213 | 86 | 189 | 6.64e-17 | 78.6 |
Msa1205390 | MtrunA17_Chr5g0415941 | 40.000 | 135 | 65 | 3 | 87 | 213 | 54 | 180 | 7.56e-17 | 79.0 |
Msa1205390 | MtrunA17_Chr8g0362751 | 46.809 | 94 | 43 | 1 | 127 | 213 | 89 | 182 | 5.92e-16 | 75.9 |
Msa1205390 | MtrunA17_Chr5g0403701 | 43.689 | 103 | 53 | 1 | 119 | 221 | 45 | 142 | 8.47e-13 | 65.9 |
Msa1205390 | MtrunA17_Chr5g0403691 | 42.857 | 105 | 58 | 1 | 119 | 221 | 45 | 149 | 9.16e-13 | 65.9 |
Msa1205390 | MtrunA17_Chr3g0127511 | 43.011 | 93 | 46 | 1 | 130 | 215 | 41 | 133 | 2.62e-12 | 65.1 |
Msa1205390 | MtrunA17_Chr8g0346251 | 42.683 | 82 | 47 | 0 | 131 | 212 | 45 | 126 | 1.85e-11 | 62.8 |
Msa1205390 | MtrunA17_Chr5g0410711 | 35.849 | 106 | 68 | 0 | 118 | 223 | 83 | 188 | 3.85e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1205390 | AT4G37790.1 | 61.806 | 288 | 82 | 9 | 1 | 270 | 1 | 278 | 2.61e-91 | 271 |
Msa1205390 | AT2G22800.1 | 58.163 | 294 | 79 | 11 | 1 | 270 | 1 | 274 | 2.63e-83 | 251 |
Msa1205390 | AT5G06710.1 | 61.376 | 189 | 56 | 4 | 76 | 254 | 136 | 317 | 4.99e-70 | 219 |
Msa1205390 | AT5G47370.1 | 57.789 | 199 | 74 | 4 | 72 | 264 | 70 | 264 | 1.75e-66 | 208 |
Msa1205390 | AT3G60390.1 | 60.656 | 183 | 57 | 6 | 69 | 238 | 94 | 274 | 1.22e-62 | 199 |
Msa1205390 | AT4G17460.1 | 60.221 | 181 | 64 | 5 | 68 | 241 | 71 | 250 | 4.76e-62 | 197 |
Msa1205390 | AT4G16780.1 | 75.194 | 129 | 30 | 2 | 112 | 239 | 115 | 242 | 2.00e-61 | 196 |
Msa1205390 | AT2G44910.1 | 79.130 | 115 | 23 | 1 | 126 | 239 | 162 | 276 | 7.21e-59 | 190 |
Msa1205390 | AT2G01430.1 | 54.676 | 139 | 56 | 2 | 106 | 239 | 113 | 249 | 2.42e-44 | 151 |
Msa1205390 | AT1G70920.2 | 52.941 | 136 | 57 | 1 | 114 | 249 | 26 | 154 | 1.03e-40 | 139 |
Msa1205390 | AT1G70920.1 | 56.349 | 126 | 48 | 1 | 114 | 239 | 56 | 174 | 1.19e-40 | 140 |
Msa1205390 | AT5G06710.4 | 59.292 | 113 | 29 | 4 | 76 | 178 | 136 | 241 | 5.02e-30 | 114 |
Msa1205390 | AT2G01430.2 | 50.526 | 95 | 40 | 2 | 106 | 195 | 113 | 205 | 1.12e-22 | 93.2 |
Msa1205390 | AT1G69780.1 | 46.465 | 99 | 53 | 0 | 116 | 214 | 74 | 172 | 7.54e-20 | 87.4 |
Msa1205390 | AT1G26960.1 | 41.964 | 112 | 65 | 0 | 119 | 230 | 63 | 174 | 2.21e-19 | 85.1 |
Msa1205390 | AT5G03790.1 | 35.374 | 147 | 79 | 2 | 127 | 257 | 77 | 223 | 3.75e-18 | 81.6 |
Msa1205390 | AT5G65310.1 | 45.000 | 100 | 48 | 1 | 122 | 214 | 67 | 166 | 1.60e-16 | 78.2 |
Msa1205390 | AT3G01470.1 | 45.161 | 93 | 44 | 1 | 127 | 212 | 68 | 160 | 1.81e-16 | 77.4 |
Msa1205390 | AT5G65310.2 | 45.000 | 100 | 48 | 1 | 122 | 214 | 49 | 148 | 1.98e-16 | 77.8 |
Msa1205390 | AT2G18550.1 | 44.000 | 100 | 56 | 0 | 114 | 213 | 48 | 147 | 8.11e-16 | 74.7 |
Msa1205390 | AT5G03790.2 | 47.253 | 91 | 48 | 0 | 127 | 217 | 77 | 167 | 9.71e-16 | 73.9 |
Msa1205390 | AT5G15150.1 | 42.478 | 113 | 56 | 3 | 113 | 216 | 96 | 208 | 1.32e-15 | 75.9 |
Msa1205390 | AT4G36740.2 | 44.681 | 94 | 52 | 0 | 120 | 213 | 49 | 142 | 2.40e-15 | 73.6 |
Msa1205390 | AT4G36740.1 | 44.681 | 94 | 52 | 0 | 120 | 213 | 48 | 141 | 2.44e-15 | 73.6 |
Msa1205390 | AT4G40060.1 | 44.330 | 97 | 47 | 1 | 125 | 214 | 57 | 153 | 2.55e-15 | 74.7 |
Msa1205390 | AT3G01220.1 | 43.269 | 104 | 53 | 2 | 119 | 216 | 77 | 180 | 2.91e-15 | 74.3 |
Msa1205390 | AT1G27045.4 | 46.875 | 96 | 44 | 1 | 127 | 215 | 68 | 163 | 4.78e-15 | 73.2 |
Msa1205390 | AT1G27045.1 | 40.909 | 132 | 62 | 3 | 127 | 250 | 68 | 191 | 5.93e-15 | 72.4 |
Msa1205390 | AT1G27045.2 | 57.576 | 66 | 28 | 0 | 127 | 192 | 17 | 82 | 8.87e-15 | 70.9 |
Msa1205390 | AT1G27045.5 | 57.576 | 66 | 28 | 0 | 127 | 192 | 25 | 90 | 9.67e-15 | 71.2 |
Msa1205390 | AT1G27045.3 | 57.576 | 66 | 28 | 0 | 127 | 192 | 25 | 90 | 9.67e-15 | 71.2 |
Msa1205390 | AT2G36610.1 | 40.816 | 98 | 50 | 1 | 126 | 215 | 70 | 167 | 3.41e-14 | 69.7 |
Msa1205390 | AT2G22430.1 | 43.750 | 96 | 50 | 1 | 125 | 216 | 60 | 155 | 7.56e-14 | 70.5 |
Msa1205390 | AT2G46680.1 | 43.011 | 93 | 49 | 1 | 130 | 218 | 35 | 127 | 1.56e-13 | 68.9 |
Msa1205390 | AT2G46680.2 | 41.111 | 90 | 53 | 0 | 130 | 219 | 35 | 124 | 1.57e-13 | 68.9 |
Msa1205390 | AT5G06710.2 | 51.163 | 86 | 25 | 4 | 76 | 151 | 136 | 214 | 4.12e-12 | 64.7 |
Msa1205390 | AT5G06710.3 | 51.163 | 86 | 25 | 4 | 76 | 151 | 136 | 214 | 4.12e-12 | 64.7 |
Msa1205390 | AT3G61890.1 | 38.947 | 95 | 44 | 1 | 130 | 210 | 33 | 127 | 2.74e-11 | 62.4 |
Msa1205390 | AT5G66700.1 | 44.872 | 78 | 43 | 0 | 115 | 192 | 59 | 136 | 6.59e-11 | 61.2 |
Msa1205390 | AT1G79840.1 | 43.373 | 83 | 46 | 1 | 126 | 207 | 102 | 184 | 9.84e-11 | 62.4 |
Find 74 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTAGAGAAATTGCTCTTAT+TGG | 0.187884 | 8_1:-61618108 | None:intergenic |
CTAGGTGGTGGTGGTGTTAA+TGG | 0.243245 | 8_1:+61618077 | Msa1205390:CDS |
TCAGGCCTTCAACTTATTCT+AGG | 0.257483 | 8_1:+61616843 | Msa1205390:CDS |
ATGTTTCACAACATTTCTTT+AGG | 0.284664 | 8_1:-61617932 | None:intergenic |
AGAGAGAGAGATTGGTAATA+AGG | 0.313031 | 8_1:-61616775 | None:intergenic |
GGTACCTGGCTCTACGGTTC+TGG | 0.335278 | 8_1:-61617422 | None:intergenic |
TTATGATTACTTGAGGAATA+AGG | 0.345806 | 8_1:-61616924 | None:intergenic |
AAGCATAGCAGATTGATCTT+TGG | 0.351274 | 8_1:-61617204 | None:intergenic |
GGATGGTGGTGTGTCTTGTT+TGG | 0.360529 | 8_1:-61616883 | None:intergenic |
TCTCTCTTGAGTTATCTTGA+TGG | 0.382425 | 8_1:+61616791 | Msa1205390:exon |
CTCTCTTGAGTTATCTTGAT+GGG | 0.399406 | 8_1:+61616792 | Msa1205390:exon |
TGTGAACTATGAAAGGGTTA+AGG | 0.429954 | 8_1:+61618268 | Msa1205390:three_prime_UTR |
ATAACTCAAGAGAGAGAGAT+TGG | 0.433571 | 8_1:-61616783 | None:intergenic |
TGTTAGCAGTGAATTAGAAA+TGG | 0.445208 | 8_1:+61617094 | Msa1205390:CDS |
CACATGAAGGACACATAGTA+AGG | 0.448920 | 8_1:-61618049 | None:intergenic |
AAGAGAAGAGAAGAAAGGTA+AGG | 0.451793 | 8_1:-61616727 | None:intergenic |
AGGCTTTGTAACGTTGTTGT+TGG | 0.454137 | 8_1:-61616904 | None:intergenic |
AATTTACAAACATAGAATAT+AGG | 0.457840 | 8_1:-61618363 | None:intergenic |
GTGAACTATGAAAGGGTTAA+GGG | 0.460344 | 8_1:+61618269 | Msa1205390:three_prime_UTR |
AAACATTAACAGAAGAGAAT+AGG | 0.467293 | 8_1:+61617949 | Msa1205390:CDS |
AAGAAAGGTAAGGGAAGAGT+GGG | 0.469487 | 8_1:-61616717 | None:intergenic |
GCTGAACCATCTTTAACGTT+GGG | 0.469771 | 8_1:+61616957 | Msa1205390:CDS |
AAAGGAGGTGCAAGAATTGA+AGG | 0.482533 | 8_1:+61617980 | Msa1205390:CDS |
AGCTGAACCATCTTTAACGT+TGG | 0.482898 | 8_1:+61616956 | Msa1205390:CDS |
CTAAGCCTAGAATAAGTTGA+AGG | 0.488952 | 8_1:-61616848 | None:intergenic |
GAAGAAAGGTAAGGGAAGAG+TGG | 0.493787 | 8_1:-61616718 | None:intergenic |
TTGTTTCATCTTTCTCTAGT+GGG | 0.496061 | 8_1:+61617051 | Msa1205390:CDS |
AAATGTATGTGAACTATGAA+AGG | 0.497564 | 8_1:+61618261 | Msa1205390:three_prime_UTR |
TTCTTCATAGTAACTCTTGG+TGG | 0.498912 | 8_1:-61616985 | None:intergenic |
AGGTGTTAGATTTAACTCTC+TGG | 0.498987 | 8_1:-61617379 | None:intergenic |
TTCATCTTTCTCTAGTGGGA+GGG | 0.505690 | 8_1:+61617055 | Msa1205390:CDS |
CACCTCGACAAGTTGAGGTC+TGG | 0.514656 | 8_1:+61617397 | Msa1205390:CDS |
GTAAGGGTAGCTGCTGGCAT+AGG | 0.516800 | 8_1:-61618032 | None:intergenic |
GTTGTTTCATCTTTCTCTAG+TGG | 0.516924 | 8_1:+61617050 | Msa1205390:CDS |
AGGTTCTTCATAGTAACTCT+TGG | 0.520099 | 8_1:-61616988 | None:intergenic |
AAGGGAAGAGAAGAGAAGAA+AGG | 0.520574 | 8_1:-61616732 | None:intergenic |
GGTTCCAGAACCGTAGAGCC+AGG | 0.526669 | 8_1:+61617418 | Msa1205390:CDS |
AATGTATGTGAACTATGAAA+GGG | 0.527889 | 8_1:+61618262 | Msa1205390:three_prime_UTR |
TTTCATCTTTCTCTAGTGGG+AGG | 0.528407 | 8_1:+61617054 | Msa1205390:CDS |
AGAGAAGAGAAGAAAGGTAA+GGG | 0.528734 | 8_1:-61616726 | None:intergenic |
GTGAAGGGGTTGTAAAAGTG+AGG | 0.536068 | 8_1:-61618131 | None:intergenic |
TTTGTAACGTTGTTGTTGGA+TGG | 0.545023 | 8_1:-61616900 | None:intergenic |
GATAAACCCAACGTTAAAGA+TGG | 0.545369 | 8_1:-61616963 | None:intergenic |
AGAGAATAGGAGGCTACAAA+AGG | 0.550932 | 8_1:+61617962 | Msa1205390:CDS |
GTAAACATGGATCTATATGA+AGG | 0.551801 | 8_1:+61618392 | Msa1205390:three_prime_UTR |
AGAAATGGAAACGACGGAGA+TGG | 0.553541 | 8_1:+61617109 | Msa1205390:CDS |
TGCTGGCATAGGCATATACA+AGG | 0.554332 | 8_1:-61618021 | None:intergenic |
TGTATAGGTACCTGGCTCTA+CGG | 0.565795 | 8_1:-61617428 | None:intergenic |
AAAGCTGAAGCAAACAGAAG+TGG | 0.566126 | 8_1:+61617899 | Msa1205390:CDS |
GTAAATTACTATAGTAAACA+TGG | 0.567162 | 8_1:+61618379 | Msa1205390:three_prime_UTR |
TGTGAGAGACTAGGTGGTGG+TGG | 0.571619 | 8_1:+61618068 | Msa1205390:CDS |
TCTAACACCTCGACAAGTTG+AGG | 0.578186 | 8_1:+61617392 | Msa1205390:CDS |
CATTAACAGAAGAGAATAGG+AGG | 0.587793 | 8_1:+61617952 | Msa1205390:CDS |
ATAGTTGTTATGATTACTTG+AGG | 0.592747 | 8_1:-61616931 | None:intergenic |
AAGACGGTGCCACTGCAGCT+AGG | 0.595899 | 8_1:+61617165 | Msa1205390:CDS |
CCACCTAGTCTCTCACATGA+AGG | 0.597382 | 8_1:-61618062 | None:intergenic |
AAGCTTCTTCCTAGCTGCAG+TGG | 0.601402 | 8_1:-61617174 | None:intergenic |
CACATAGTAAGGGTAGCTGC+TGG | 0.601478 | 8_1:-61618038 | None:intergenic |
CAAGATGCTAGTAACAACTC+AGG | 0.601537 | 8_1:+61616825 | Msa1205390:CDS |
GTAACGTTGTTGTTGGATGG+TGG | 0.602624 | 8_1:-61616897 | None:intergenic |
GAATAGGAGGCTACAAAAGG+AGG | 0.603538 | 8_1:+61617965 | Msa1205390:CDS |
GGTGGTGGTGGTGTTAATGG+TGG | 0.605462 | 8_1:+61618080 | Msa1205390:CDS |
TGCTGCTGAAGAATTTGTGA+AGG | 0.622725 | 8_1:-61618147 | None:intergenic |
AACCAGACCTCAACTTGTCG+AGG | 0.626268 | 8_1:-61617399 | None:intergenic |
TGAATTAGAAATGGAAACGA+CGG | 0.634393 | 8_1:+61617103 | Msa1205390:CDS |
GCTGCTGAAGAATTTGTGAA+GGG | 0.658168 | 8_1:-61618146 | None:intergenic |
ACATGAAGGACACATAGTAA+GGG | 0.658983 | 8_1:-61618048 | None:intergenic |
CCTTCATGTGAGAGACTAGG+TGG | 0.665742 | 8_1:+61618062 | Msa1205390:CDS |
GATGAAACAACGCTGTGATG+AGG | 0.669037 | 8_1:-61617038 | None:intergenic |
TCATGTGAGAGACTAGGTGG+TGG | 0.669612 | 8_1:+61618065 | Msa1205390:CDS |
ATCAGCGATGAAGATGAAGA+CGG | 0.672472 | 8_1:+61617149 | Msa1205390:CDS |
TGTCCTTCATGTGAGAGACT+AGG | 0.681664 | 8_1:+61618059 | Msa1205390:CDS |
CTGCTGAAGAATTTGTGAAG+GGG | 0.685286 | 8_1:-61618145 | None:intergenic |
GCTGGCATAGGCATATACAA+GGG | 0.757470 | 8_1:-61618020 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATTTGATAAATAAATG+AGG | - | chr8_1:61617325-61617344 | None:intergenic | 10.0% |
!! | TATTATCTTCAAATTAATTA+AGG | + | chr8_1:61617660-61617679 | Msa1205390:intron | 10.0% |
!! | ATTATCTTCAAATTAATTAA+GGG | + | chr8_1:61617661-61617680 | Msa1205390:intron | 10.0% |
!!! | TGTAATATTAAGATTATTTT+TGG | + | chr8_1:61617852-61617871 | Msa1205390:intron | 10.0% |
!! | AAAAATTTGATAAATAAATG+AGG | - | chr8_1:61617325-61617344 | None:intergenic | 10.0% |
!! | TATTATCTTCAAATTAATTA+AGG | + | chr8_1:61617660-61617679 | Msa1205390:intron | 10.0% |
!! | ATTATCTTCAAATTAATTAA+GGG | + | chr8_1:61617661-61617680 | Msa1205390:intron | 10.0% |
!!! | TGTAATATTAAGATTATTTT+TGG | + | chr8_1:61617852-61617871 | Msa1205390:intron | 10.0% |
!!! | TATTTATCAAATTTTTGTGA+TGG | + | chr8_1:61617329-61617348 | Msa1205390:intron | 15.0% |
!! | AATTAAATTAAACTCAACTA+TGG | + | chr8_1:61617482-61617501 | Msa1205390:intron | 15.0% |
!! | ATTTGAAGATAATATTTCAT+TGG | - | chr8_1:61617654-61617673 | None:intergenic | 15.0% |
!! | ATTTACAATAGTATATGTAT+TGG | - | chr8_1:61617710-61617729 | None:intergenic | 15.0% |
!! | AATACATATACTATTGTAAA+TGG | + | chr8_1:61617709-61617728 | Msa1205390:intron | 15.0% |
!!! | TATTAAGATTATTTTTGGTT+TGG | + | chr8_1:61617857-61617876 | Msa1205390:intron | 15.0% |
!! | AATTTACAAACATAGAATAT+AGG | - | chr8_1:61618366-61618385 | None:intergenic | 15.0% |
!!! | TATTTATCAAATTTTTGTGA+TGG | + | chr8_1:61617329-61617348 | Msa1205390:intron | 15.0% |
!! | AATTAAATTAAACTCAACTA+TGG | + | chr8_1:61617482-61617501 | Msa1205390:intron | 15.0% |
!! | ATTTGAAGATAATATTTCAT+TGG | - | chr8_1:61617654-61617673 | None:intergenic | 15.0% |
!! | ATTTACAATAGTATATGTAT+TGG | - | chr8_1:61617710-61617729 | None:intergenic | 15.0% |
!! | AATACATATACTATTGTAAA+TGG | + | chr8_1:61617709-61617728 | Msa1205390:intron | 15.0% |
!!! | TATTAAGATTATTTTTGGTT+TGG | + | chr8_1:61617857-61617876 | Msa1205390:intron | 15.0% |
!! | AATTTACAAACATAGAATAT+AGG | - | chr8_1:61618366-61618385 | None:intergenic | 15.0% |
!! | TTATGCATATATGTATGTAT+AGG | - | chr8_1:61617446-61617465 | None:intergenic | 20.0% |
!!! | TTTTCAATTGAAGTTATTCT+GGG | - | chr8_1:61617739-61617758 | None:intergenic | 20.0% |
!!! | TTTTTCAATTGAAGTTATTC+TGG | - | chr8_1:61617740-61617759 | None:intergenic | 20.0% |
!!! | ATTATTTTTGGTTTGGATTT+TGG | + | chr8_1:61617864-61617883 | Msa1205390:intron | 20.0% |
!!! | TTATTTTTGGTTTGGATTTT+GGG | + | chr8_1:61617865-61617884 | Msa1205390:intron | 20.0% |
!!! | TTTGTATTTTTTTGGTTGAA+GGG | + | chr8_1:61618238-61618257 | Msa1205390:three_prime_UTR | 20.0% |
!! | GTAAATTACTATAGTAAACA+TGG | + | chr8_1:61618379-61618398 | Msa1205390:three_prime_UTR | 20.0% |
!! | TTATGCATATATGTATGTAT+AGG | - | chr8_1:61617446-61617465 | None:intergenic | 20.0% |
!!! | TTTTCAATTGAAGTTATTCT+GGG | - | chr8_1:61617739-61617758 | None:intergenic | 20.0% |
!!! | TTTTTCAATTGAAGTTATTC+TGG | - | chr8_1:61617740-61617759 | None:intergenic | 20.0% |
!!! | ATTATTTTTGGTTTGGATTT+TGG | + | chr8_1:61617864-61617883 | Msa1205390:intron | 20.0% |
!!! | TTATTTTTGGTTTGGATTTT+GGG | + | chr8_1:61617865-61617884 | Msa1205390:intron | 20.0% |
!!! | TTTGTATTTTTTTGGTTGAA+GGG | + | chr8_1:61618238-61618257 | Msa1205390:three_prime_UTR | 20.0% |
!! | GTAAATTACTATAGTAAACA+TGG | + | chr8_1:61618379-61618398 | Msa1205390:three_prime_UTR | 20.0% |
!!! | TTTTTGTTTTGTGAAAGGAA+GGG | - | chr8_1:61616753-61616772 | None:intergenic | 25.0% |
! | TTATGATTACTTGAGGAATA+AGG | - | chr8_1:61616927-61616946 | None:intergenic | 25.0% |
! | ATAGTTGTTATGATTACTTG+AGG | - | chr8_1:61616934-61616953 | None:intergenic | 25.0% |
! | GAGATTATGATTATGATTAC+AGG | - | chr8_1:61617263-61617282 | None:intergenic | 25.0% |
!!! | TCAACTATGGTTTTAAATTG+CGG | + | chr8_1:61617495-61617514 | Msa1205390:intron | 25.0% |
! | CCAATATGAAGATTATGTAA+TGG | - | chr8_1:61617530-61617549 | None:intergenic | 25.0% |
! | CCATTACATAATCTTCATAT+TGG | + | chr8_1:61617527-61617546 | Msa1205390:intron | 25.0% |
! | CATATACTATTGTAAATGGA+TGG | + | chr8_1:61617713-61617732 | Msa1205390:intron | 25.0% |
!! | TGTGTCGACAAAAAAAATTA+TGG | + | chr8_1:61617804-61617823 | Msa1205390:intron | 25.0% |
!! | GTGTCGACAAAAAAAATTAT+GGG | + | chr8_1:61617805-61617824 | Msa1205390:intron | 25.0% |
! | ATGTTTCACAACATTTCTTT+AGG | - | chr8_1:61617935-61617954 | None:intergenic | 25.0% |
! | AAACATTAACAGAAGAGAAT+AGG | + | chr8_1:61617949-61617968 | Msa1205390:CDS | 25.0% |
! | AAAAAATACAAAGGTTGTGT+GGG | - | chr8_1:61618230-61618249 | None:intergenic | 25.0% |
! | AAAAAAATACAAAGGTTGTG+TGG | - | chr8_1:61618231-61618250 | None:intergenic | 25.0% |
!!! | ACACAACCTTTGTATTTTTT+TGG | + | chr8_1:61618230-61618249 | Msa1205390:three_prime_UTR | 25.0% |
! | CTTCAACCAAAAAAATACAA+AGG | - | chr8_1:61618239-61618258 | None:intergenic | 25.0% |
!!! | CTTTGTATTTTTTTGGTTGA+AGG | + | chr8_1:61618237-61618256 | Msa1205390:three_prime_UTR | 25.0% |
! | AAATGTATGTGAACTATGAA+AGG | + | chr8_1:61618261-61618280 | Msa1205390:three_prime_UTR | 25.0% |
! | AATGTATGTGAACTATGAAA+GGG | + | chr8_1:61618262-61618281 | Msa1205390:three_prime_UTR | 25.0% |
!!! | TCAATTGTTCATTTTTGTTG+TGG | + | chr8_1:61618433-61618452 | Msa1205390:three_prime_UTR | 25.0% |
!!! | CAATTGTTCATTTTTGTTGT+GGG | + | chr8_1:61618434-61618453 | Msa1205390:three_prime_UTR | 25.0% |
!!! | TTTTTGTTTTGTGAAAGGAA+GGG | - | chr8_1:61616753-61616772 | None:intergenic | 25.0% |
! | TTATGATTACTTGAGGAATA+AGG | - | chr8_1:61616927-61616946 | None:intergenic | 25.0% |
! | ATAGTTGTTATGATTACTTG+AGG | - | chr8_1:61616934-61616953 | None:intergenic | 25.0% |
! | GAGATTATGATTATGATTAC+AGG | - | chr8_1:61617263-61617282 | None:intergenic | 25.0% |
!!! | TCAACTATGGTTTTAAATTG+CGG | + | chr8_1:61617495-61617514 | Msa1205390:intron | 25.0% |
! | CCAATATGAAGATTATGTAA+TGG | - | chr8_1:61617530-61617549 | None:intergenic | 25.0% |
! | CCATTACATAATCTTCATAT+TGG | + | chr8_1:61617527-61617546 | Msa1205390:intron | 25.0% |
! | CATATACTATTGTAAATGGA+TGG | + | chr8_1:61617713-61617732 | Msa1205390:intron | 25.0% |
!! | TGTGTCGACAAAAAAAATTA+TGG | + | chr8_1:61617804-61617823 | Msa1205390:intron | 25.0% |
!! | GTGTCGACAAAAAAAATTAT+GGG | + | chr8_1:61617805-61617824 | Msa1205390:intron | 25.0% |
! | ATGTTTCACAACATTTCTTT+AGG | - | chr8_1:61617935-61617954 | None:intergenic | 25.0% |
! | AAACATTAACAGAAGAGAAT+AGG | + | chr8_1:61617949-61617968 | Msa1205390:CDS | 25.0% |
! | AAAAAATACAAAGGTTGTGT+GGG | - | chr8_1:61618230-61618249 | None:intergenic | 25.0% |
! | AAAAAAATACAAAGGTTGTG+TGG | - | chr8_1:61618231-61618250 | None:intergenic | 25.0% |
!!! | ACACAACCTTTGTATTTTTT+TGG | + | chr8_1:61618230-61618249 | Msa1205390:three_prime_UTR | 25.0% |
! | CTTCAACCAAAAAAATACAA+AGG | - | chr8_1:61618239-61618258 | None:intergenic | 25.0% |
!!! | CTTTGTATTTTTTTGGTTGA+AGG | + | chr8_1:61618237-61618256 | Msa1205390:three_prime_UTR | 25.0% |
! | AAATGTATGTGAACTATGAA+AGG | + | chr8_1:61618261-61618280 | Msa1205390:three_prime_UTR | 25.0% |
! | AATGTATGTGAACTATGAAA+GGG | + | chr8_1:61618262-61618281 | Msa1205390:three_prime_UTR | 25.0% |
!!! | TCAATTGTTCATTTTTGTTG+TGG | + | chr8_1:61618433-61618452 | Msa1205390:three_prime_UTR | 25.0% |
!!! | GTTTTTGTTTTGTGAAAGGA+AGG | - | chr8_1:61616754-61616773 | None:intergenic | 30.0% |
!!! | AGGTGTTTTTGTTTTGTGAA+AGG | - | chr8_1:61616758-61616777 | None:intergenic | 30.0% |
GTTTGTGTAGAAAAATCAAG+AGG | - | chr8_1:61617011-61617030 | None:intergenic | 30.0% | |
TTGTTTCATCTTTCTCTAGT+GGG | + | chr8_1:61617051-61617070 | Msa1205390:CDS | 30.0% | |
TGTTAGCAGTGAATTAGAAA+TGG | + | chr8_1:61617094-61617113 | Msa1205390:CDS | 30.0% | |
TGAATTAGAAATGGAAACGA+CGG | + | chr8_1:61617103-61617122 | Msa1205390:CDS | 30.0% | |
TATATGTATGTATAGGTACC+TGG | - | chr8_1:61617439-61617458 | None:intergenic | 30.0% | |
!!! | TGCGAATATAACTGTTTTTG+AGG | - | chr8_1:61617599-61617618 | None:intergenic | 30.0% |
GGTGATATATGATATTTACG+TGG | - | chr8_1:61617689-61617708 | None:intergenic | 30.0% | |
CTTAGAGAAATTGCTCTTAT+TGG | - | chr8_1:61618111-61618130 | None:intergenic | 30.0% | |
GTAAACATGGATCTATATGA+AGG | + | chr8_1:61618392-61618411 | Msa1205390:three_prime_UTR | 30.0% | |
!!! | GTTTTTGTTTTGTGAAAGGA+AGG | - | chr8_1:61616754-61616773 | None:intergenic | 30.0% |
!!! | AGGTGTTTTTGTTTTGTGAA+AGG | - | chr8_1:61616758-61616777 | None:intergenic | 30.0% |
GTTTGTGTAGAAAAATCAAG+AGG | - | chr8_1:61617011-61617030 | None:intergenic | 30.0% | |
TTGTTTCATCTTTCTCTAGT+GGG | + | chr8_1:61617051-61617070 | Msa1205390:CDS | 30.0% | |
TGTTAGCAGTGAATTAGAAA+TGG | + | chr8_1:61617094-61617113 | Msa1205390:CDS | 30.0% | |
TGAATTAGAAATGGAAACGA+CGG | + | chr8_1:61617103-61617122 | Msa1205390:CDS | 30.0% | |
TATATGTATGTATAGGTACC+TGG | - | chr8_1:61617439-61617458 | None:intergenic | 30.0% | |
!!! | TGCGAATATAACTGTTTTTG+AGG | - | chr8_1:61617599-61617618 | None:intergenic | 30.0% |
GGTGATATATGATATTTACG+TGG | - | chr8_1:61617689-61617708 | None:intergenic | 30.0% | |
CTTAGAGAAATTGCTCTTAT+TGG | - | chr8_1:61618111-61618130 | None:intergenic | 30.0% | |
GTAAACATGGATCTATATGA+AGG | + | chr8_1:61618392-61618411 | Msa1205390:three_prime_UTR | 30.0% | |
AGAGAAGAGAAGAAAGGTAA+GGG | - | chr8_1:61616729-61616748 | None:intergenic | 35.0% | |
AAGAGAAGAGAAGAAAGGTA+AGG | - | chr8_1:61616730-61616749 | None:intergenic | 35.0% | |
! | AGAGAGAGAGATTGGTAATA+AGG | - | chr8_1:61616778-61616797 | None:intergenic | 35.0% |
ATAACTCAAGAGAGAGAGAT+TGG | - | chr8_1:61616786-61616805 | None:intergenic | 35.0% | |
TCTCTCTTGAGTTATCTTGA+TGG | + | chr8_1:61616791-61616810 | Msa1205390:exon | 35.0% | |
CTCTCTTGAGTTATCTTGAT+GGG | + | chr8_1:61616792-61616811 | Msa1205390:exon | 35.0% | |
! | CTAAGCCTAGAATAAGTTGA+AGG | - | chr8_1:61616851-61616870 | None:intergenic | 35.0% |
! | TTTGTAACGTTGTTGTTGGA+TGG | - | chr8_1:61616903-61616922 | None:intergenic | 35.0% |
GATAAACCCAACGTTAAAGA+TGG | - | chr8_1:61616966-61616985 | None:intergenic | 35.0% | |
TTCTTCATAGTAACTCTTGG+TGG | - | chr8_1:61616988-61617007 | None:intergenic | 35.0% | |
AGGTTCTTCATAGTAACTCT+TGG | - | chr8_1:61616991-61617010 | None:intergenic | 35.0% | |
! | GTTGTTTCATCTTTCTCTAG+TGG | + | chr8_1:61617050-61617069 | Msa1205390:CDS | 35.0% |
AAGCATAGCAGATTGATCTT+TGG | - | chr8_1:61617207-61617226 | None:intergenic | 35.0% | |
AGGTGTTAGATTTAACTCTC+TGG | - | chr8_1:61617382-61617401 | None:intergenic | 35.0% | |
CATTAACAGAAGAGAATAGG+AGG | + | chr8_1:61617952-61617971 | Msa1205390:CDS | 35.0% | |
ACATGAAGGACACATAGTAA+GGG | - | chr8_1:61618051-61618070 | None:intergenic | 35.0% | |
TGTGAACTATGAAAGGGTTA+AGG | + | chr8_1:61618268-61618287 | Msa1205390:three_prime_UTR | 35.0% | |
GTGAACTATGAAAGGGTTAA+GGG | + | chr8_1:61618269-61618288 | Msa1205390:three_prime_UTR | 35.0% | |
AGAGAAGAGAAGAAAGGTAA+GGG | - | chr8_1:61616729-61616748 | None:intergenic | 35.0% | |
AAGAGAAGAGAAGAAAGGTA+AGG | - | chr8_1:61616730-61616749 | None:intergenic | 35.0% | |
! | AGAGAGAGAGATTGGTAATA+AGG | - | chr8_1:61616778-61616797 | None:intergenic | 35.0% |
ATAACTCAAGAGAGAGAGAT+TGG | - | chr8_1:61616786-61616805 | None:intergenic | 35.0% | |
TCTCTCTTGAGTTATCTTGA+TGG | + | chr8_1:61616791-61616810 | Msa1205390:exon | 35.0% | |
CTCTCTTGAGTTATCTTGAT+GGG | + | chr8_1:61616792-61616811 | Msa1205390:exon | 35.0% | |
! | CTAAGCCTAGAATAAGTTGA+AGG | - | chr8_1:61616851-61616870 | None:intergenic | 35.0% |
! | TTTGTAACGTTGTTGTTGGA+TGG | - | chr8_1:61616903-61616922 | None:intergenic | 35.0% |
GATAAACCCAACGTTAAAGA+TGG | - | chr8_1:61616966-61616985 | None:intergenic | 35.0% | |
TTCTTCATAGTAACTCTTGG+TGG | - | chr8_1:61616988-61617007 | None:intergenic | 35.0% | |
AGGTTCTTCATAGTAACTCT+TGG | - | chr8_1:61616991-61617010 | None:intergenic | 35.0% | |
! | GTTGTTTCATCTTTCTCTAG+TGG | + | chr8_1:61617050-61617069 | Msa1205390:CDS | 35.0% |
AAGCATAGCAGATTGATCTT+TGG | - | chr8_1:61617207-61617226 | None:intergenic | 35.0% | |
AGGTGTTAGATTTAACTCTC+TGG | - | chr8_1:61617382-61617401 | None:intergenic | 35.0% | |
CATTAACAGAAGAGAATAGG+AGG | + | chr8_1:61617952-61617971 | Msa1205390:CDS | 35.0% | |
ACATGAAGGACACATAGTAA+GGG | - | chr8_1:61618051-61618070 | None:intergenic | 35.0% | |
TGTGAACTATGAAAGGGTTA+AGG | + | chr8_1:61618268-61618287 | Msa1205390:three_prime_UTR | 35.0% | |
GTGAACTATGAAAGGGTTAA+GGG | + | chr8_1:61618269-61618288 | Msa1205390:three_prime_UTR | 35.0% | |
AAGGGAAGAGAAGAGAAGAA+AGG | - | chr8_1:61616735-61616754 | None:intergenic | 40.0% | |
CAAGATGCTAGTAACAACTC+AGG | + | chr8_1:61616825-61616844 | Msa1205390:CDS | 40.0% | |
TCAGGCCTTCAACTTATTCT+AGG | + | chr8_1:61616843-61616862 | Msa1205390:CDS | 40.0% | |
! | AGGCTTTGTAACGTTGTTGT+TGG | - | chr8_1:61616907-61616926 | None:intergenic | 40.0% |
AGCTGAACCATCTTTAACGT+TGG | + | chr8_1:61616956-61616975 | Msa1205390:CDS | 40.0% | |
GCTGAACCATCTTTAACGTT+GGG | + | chr8_1:61616957-61616976 | Msa1205390:CDS | 40.0% | |
TTTCATCTTTCTCTAGTGGG+AGG | + | chr8_1:61617054-61617073 | Msa1205390:CDS | 40.0% | |
TTCATCTTTCTCTAGTGGGA+GGG | + | chr8_1:61617055-61617074 | Msa1205390:CDS | 40.0% | |
ATCAGCGATGAAGATGAAGA+CGG | + | chr8_1:61617149-61617168 | Msa1205390:CDS | 40.0% | |
GTACTTAAATTGCAGTACGC+AGG | - | chr8_1:61617626-61617645 | None:intergenic | 40.0% | |
AAAGCTGAAGCAAACAGAAG+TGG | + | chr8_1:61617899-61617918 | Msa1205390:CDS | 40.0% | |
AGAGAATAGGAGGCTACAAA+AGG | + | chr8_1:61617962-61617981 | Msa1205390:CDS | 40.0% | |
! | AAAGGAGGTGCAAGAATTGA+AGG | + | chr8_1:61617980-61617999 | Msa1205390:CDS | 40.0% |
CACATGAAGGACACATAGTA+AGG | - | chr8_1:61618052-61618071 | None:intergenic | 40.0% | |
CTGCTGAAGAATTTGTGAAG+GGG | - | chr8_1:61618148-61618167 | None:intergenic | 40.0% | |
GCTGCTGAAGAATTTGTGAA+GGG | - | chr8_1:61618149-61618168 | None:intergenic | 40.0% | |
TGCTGCTGAAGAATTTGTGA+AGG | - | chr8_1:61618150-61618169 | None:intergenic | 40.0% | |
AAGGGAAGAGAAGAGAAGAA+AGG | - | chr8_1:61616735-61616754 | None:intergenic | 40.0% | |
CAAGATGCTAGTAACAACTC+AGG | + | chr8_1:61616825-61616844 | Msa1205390:CDS | 40.0% | |
TCAGGCCTTCAACTTATTCT+AGG | + | chr8_1:61616843-61616862 | Msa1205390:CDS | 40.0% | |
! | AGGCTTTGTAACGTTGTTGT+TGG | - | chr8_1:61616907-61616926 | None:intergenic | 40.0% |
AGCTGAACCATCTTTAACGT+TGG | + | chr8_1:61616956-61616975 | Msa1205390:CDS | 40.0% | |
GCTGAACCATCTTTAACGTT+GGG | + | chr8_1:61616957-61616976 | Msa1205390:CDS | 40.0% | |
TTTCATCTTTCTCTAGTGGG+AGG | + | chr8_1:61617054-61617073 | Msa1205390:CDS | 40.0% | |
TTCATCTTTCTCTAGTGGGA+GGG | + | chr8_1:61617055-61617074 | Msa1205390:CDS | 40.0% | |
ATCAGCGATGAAGATGAAGA+CGG | + | chr8_1:61617149-61617168 | Msa1205390:CDS | 40.0% | |
GTACTTAAATTGCAGTACGC+AGG | - | chr8_1:61617626-61617645 | None:intergenic | 40.0% | |
AAAGCTGAAGCAAACAGAAG+TGG | + | chr8_1:61617899-61617918 | Msa1205390:CDS | 40.0% | |
AGAGAATAGGAGGCTACAAA+AGG | + | chr8_1:61617962-61617981 | Msa1205390:CDS | 40.0% | |
! | AAAGGAGGTGCAAGAATTGA+AGG | + | chr8_1:61617980-61617999 | Msa1205390:CDS | 40.0% |
CACATGAAGGACACATAGTA+AGG | - | chr8_1:61618052-61618071 | None:intergenic | 40.0% | |
CTGCTGAAGAATTTGTGAAG+GGG | - | chr8_1:61618148-61618167 | None:intergenic | 40.0% | |
GCTGCTGAAGAATTTGTGAA+GGG | - | chr8_1:61618149-61618168 | None:intergenic | 40.0% | |
TGCTGCTGAAGAATTTGTGA+AGG | - | chr8_1:61618150-61618169 | None:intergenic | 40.0% | |
GAAGAAAGGTAAGGGAAGAG+TGG | - | chr8_1:61616721-61616740 | None:intergenic | 45.0% | |
! | GTAACGTTGTTGTTGGATGG+TGG | - | chr8_1:61616900-61616919 | None:intergenic | 45.0% |
GATGAAACAACGCTGTGATG+AGG | - | chr8_1:61617041-61617060 | None:intergenic | 45.0% | |
AGAAATGGAAACGACGGAGA+TGG | + | chr8_1:61617109-61617128 | Msa1205390:CDS | 45.0% | |
TCTAACACCTCGACAAGTTG+AGG | + | chr8_1:61617392-61617411 | Msa1205390:CDS | 45.0% | |
!! | TGTATAGGTACCTGGCTCTA+CGG | - | chr8_1:61617431-61617450 | None:intergenic | 45.0% |
GAATAGGAGGCTACAAAAGG+AGG | + | chr8_1:61617965-61617984 | Msa1205390:CDS | 45.0% | |
GCTGGCATAGGCATATACAA+GGG | - | chr8_1:61618023-61618042 | None:intergenic | 45.0% | |
TGCTGGCATAGGCATATACA+AGG | - | chr8_1:61618024-61618043 | None:intergenic | 45.0% | |
TGTCCTTCATGTGAGAGACT+AGG | + | chr8_1:61618059-61618078 | Msa1205390:CDS | 45.0% | |
GTGAAGGGGTTGTAAAAGTG+AGG | - | chr8_1:61618134-61618153 | None:intergenic | 45.0% | |
GAAGAAAGGTAAGGGAAGAG+TGG | - | chr8_1:61616721-61616740 | None:intergenic | 45.0% | |
! | GTAACGTTGTTGTTGGATGG+TGG | - | chr8_1:61616900-61616919 | None:intergenic | 45.0% |
GATGAAACAACGCTGTGATG+AGG | - | chr8_1:61617041-61617060 | None:intergenic | 45.0% | |
AGAAATGGAAACGACGGAGA+TGG | + | chr8_1:61617109-61617128 | Msa1205390:CDS | 45.0% | |
TCTAACACCTCGACAAGTTG+AGG | + | chr8_1:61617392-61617411 | Msa1205390:CDS | 45.0% | |
!! | TGTATAGGTACCTGGCTCTA+CGG | - | chr8_1:61617431-61617450 | None:intergenic | 45.0% |
GAATAGGAGGCTACAAAAGG+AGG | + | chr8_1:61617965-61617984 | Msa1205390:CDS | 45.0% | |
GCTGGCATAGGCATATACAA+GGG | - | chr8_1:61618023-61618042 | None:intergenic | 45.0% | |
TGCTGGCATAGGCATATACA+AGG | - | chr8_1:61618024-61618043 | None:intergenic | 45.0% | |
TGTCCTTCATGTGAGAGACT+AGG | + | chr8_1:61618059-61618078 | Msa1205390:CDS | 45.0% | |
GTGAAGGGGTTGTAAAAGTG+AGG | - | chr8_1:61618134-61618153 | None:intergenic | 45.0% | |
! | GGATGGTGGTGTGTCTTGTT+TGG | - | chr8_1:61616886-61616905 | None:intergenic | 50.0% |
AAGCTTCTTCCTAGCTGCAG+TGG | - | chr8_1:61617177-61617196 | None:intergenic | 50.0% | |
AACCAGACCTCAACTTGTCG+AGG | - | chr8_1:61617402-61617421 | None:intergenic | 50.0% | |
CACATAGTAAGGGTAGCTGC+TGG | - | chr8_1:61618041-61618060 | None:intergenic | 50.0% | |
CCACCTAGTCTCTCACATGA+AGG | - | chr8_1:61618065-61618084 | None:intergenic | 50.0% | |
CCTTCATGTGAGAGACTAGG+TGG | + | chr8_1:61618062-61618081 | Msa1205390:CDS | 50.0% | |
TCATGTGAGAGACTAGGTGG+TGG | + | chr8_1:61618065-61618084 | Msa1205390:CDS | 50.0% | |
!! | CTAGGTGGTGGTGGTGTTAA+TGG | + | chr8_1:61618077-61618096 | Msa1205390:CDS | 50.0% |
! | GGATGGTGGTGTGTCTTGTT+TGG | - | chr8_1:61616886-61616905 | None:intergenic | 50.0% |
AAGCTTCTTCCTAGCTGCAG+TGG | - | chr8_1:61617177-61617196 | None:intergenic | 50.0% | |
AACCAGACCTCAACTTGTCG+AGG | - | chr8_1:61617402-61617421 | None:intergenic | 50.0% | |
CACATAGTAAGGGTAGCTGC+TGG | - | chr8_1:61618041-61618060 | None:intergenic | 50.0% | |
CCACCTAGTCTCTCACATGA+AGG | - | chr8_1:61618065-61618084 | None:intergenic | 50.0% | |
CCTTCATGTGAGAGACTAGG+TGG | + | chr8_1:61618062-61618081 | Msa1205390:CDS | 50.0% | |
TCATGTGAGAGACTAGGTGG+TGG | + | chr8_1:61618065-61618084 | Msa1205390:CDS | 50.0% | |
!! | CTAGGTGGTGGTGGTGTTAA+TGG | + | chr8_1:61618077-61618096 | Msa1205390:CDS | 50.0% |
! | CACCTCGACAAGTTGAGGTC+TGG | + | chr8_1:61617397-61617416 | Msa1205390:CDS | 55.0% |
GTAAGGGTAGCTGCTGGCAT+AGG | - | chr8_1:61618035-61618054 | None:intergenic | 55.0% | |
! | TGTGAGAGACTAGGTGGTGG+TGG | + | chr8_1:61618068-61618087 | Msa1205390:CDS | 55.0% |
!! | GGTGGTGGTGGTGTTAATGG+TGG | + | chr8_1:61618080-61618099 | Msa1205390:CDS | 55.0% |
! | CACCTCGACAAGTTGAGGTC+TGG | + | chr8_1:61617397-61617416 | Msa1205390:CDS | 55.0% |
GTAAGGGTAGCTGCTGGCAT+AGG | - | chr8_1:61618035-61618054 | None:intergenic | 55.0% | |
! | TGTGAGAGACTAGGTGGTGG+TGG | + | chr8_1:61618068-61618087 | Msa1205390:CDS | 55.0% |
!! | GGTGGTGGTGGTGTTAATGG+TGG | + | chr8_1:61618080-61618099 | Msa1205390:CDS | 55.0% |
!! | AAGACGGTGCCACTGCAGCT+AGG | + | chr8_1:61617165-61617184 | Msa1205390:CDS | 60.0% |
GGTTCCAGAACCGTAGAGCC+AGG | + | chr8_1:61617418-61617437 | Msa1205390:CDS | 60.0% | |
!! | GGTACCTGGCTCTACGGTTC+TGG | - | chr8_1:61617425-61617444 | None:intergenic | 60.0% |
!! | AAGACGGTGCCACTGCAGCT+AGG | + | chr8_1:61617165-61617184 | Msa1205390:CDS | 60.0% |
GGTTCCAGAACCGTAGAGCC+AGG | + | chr8_1:61617418-61617437 | Msa1205390:CDS | 60.0% | |
!! | GGTACCTGGCTCTACGGTTC+TGG | - | chr8_1:61617425-61617444 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 61616718 | 61618456 | 61616718 | ID=Msa1205390;Name=Msa1205390 |
chr8_1 | mRNA | 61616718 | 61618456 | 61616718 | ID=Msa1205390-mRNA-1;Parent=Msa1205390;Name=Msa1205390-mRNA-1;_AED=0.06;_eAED=0.06;_QI=92|1|1|1|1|1|3|281|270 |
chr8_1 | exon | 61616718 | 61617262 | 61616718 | ID=Msa1205390-mRNA-1:exon:20011;Parent=Msa1205390-mRNA-1 |
chr8_1 | exon | 61617360 | 61617439 | 61617360 | ID=Msa1205390-mRNA-1:exon:20012;Parent=Msa1205390-mRNA-1 |
chr8_1 | exon | 61617896 | 61618456 | 61617896 | ID=Msa1205390-mRNA-1:exon:20013;Parent=Msa1205390-mRNA-1 |
chr8_1 | five_prime_UTR | 61616718 | 61616809 | 61616718 | ID=Msa1205390-mRNA-1:five_prime_utr;Parent=Msa1205390-mRNA-1 |
chr8_1 | CDS | 61616810 | 61617262 | 61616810 | ID=Msa1205390-mRNA-1:cds;Parent=Msa1205390-mRNA-1 |
chr8_1 | CDS | 61617360 | 61617439 | 61617360 | ID=Msa1205390-mRNA-1:cds;Parent=Msa1205390-mRNA-1 |
chr8_1 | CDS | 61617896 | 61618175 | 61617896 | ID=Msa1205390-mRNA-1:cds;Parent=Msa1205390-mRNA-1 |
chr8_1 | three_prime_UTR | 61618176 | 61618456 | 61618176 | ID=Msa1205390-mRNA-1:three_prime_utr;Parent=Msa1205390-mRNA-1 |
Gene Sequence |
Protein sequence |