AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1092090


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1092090 MtrunA17_Chr7g0228751 95.729 398 17 0 1 398 31 428 0.0 795
Msa1092090 MtrunA17_Chr7g0228861 67.322 407 123 4 1 398 39 444 0.0 558
Msa1092090 MtrunA17_Chr6g0475451 61.519 395 130 9 1 376 39 430 2.04e-163 465
Msa1092090 MtrunA17_Chr5g0420521 61.168 394 132 8 1 376 42 432 1.78e-161 460
Msa1092090 MtrunA17_Chr1g0179411 67.623 244 70 5 158 394 15 256 1.10e-107 317
Msa1092090 MtrunA17_Chr4g0005431 24.235 425 241 17 3 374 21 417 1.79e-25 107
Msa1092090 MtrunA17_Chr2g0287071 28.205 390 224 16 4 372 14 368 7.27e-24 101
Msa1092090 MtrunA17_Chr1g0182401 25.707 389 238 15 1 372 1 355 7.05e-23 99.4
Msa1092090 MtrunA17_Chr3g0133441 23.821 403 256 12 3 373 22 405 2.59e-22 97.8
Msa1092090 MtrunA17_Chr2g0287121 26.598 391 232 16 1 372 18 372 2.95e-22 97.4
Msa1092090 MtrunA17_Chr6g0477631 23.706 367 214 14 4 357 16 329 3.70e-22 96.7
Msa1092090 MtrunA17_Chr4g0075791 22.850 407 251 15 1 382 1 369 6.38e-22 96.7
Msa1092090 MtrunA17_Chr8g0339911 27.490 251 158 9 4 248 1 233 1.61e-21 93.2
Msa1092090 MtrunA17_Chr6g0483101 27.000 400 252 15 7 383 20 402 1.87e-21 95.5
Msa1092090 MtrunA17_Chr2g0303031 25.954 393 223 15 4 372 24 372 2.85e-21 94.4
Msa1092090 MtrunA17_Chr5g0447601 25.871 402 252 14 6 377 18 403 3.03e-21 94.7
Msa1092090 MtrunA17_Chr3g0079611 24.936 393 233 17 1 372 39 390 5.06e-21 94.0
Msa1092090 MtrunA17_Chr3g0091221 24.937 397 233 15 1 372 38 394 1.33e-20 92.8
Msa1092090 MtrunA17_Chr4g0010581 25.000 396 236 14 4 387 3 349 3.96e-20 90.9
Msa1092090 MtrunA17_Chr6g0483081 26.531 392 248 15 7 375 20 394 4.99e-20 91.3
Msa1092090 MtrunA17_Chr2g0292331 25.974 385 234 19 5 372 52 402 6.01e-20 90.9
Msa1092090 MtrunA17_Chr4g0065061 26.357 387 240 15 4 377 23 377 6.61e-20 90.5
Msa1092090 MtrunA17_Chr5g0398251 25.127 394 232 17 4 371 17 373 9.49e-20 90.1
Msa1092090 MtrunA17_Chr3g0088901 22.959 392 245 15 1 372 17 371 1.07e-19 89.7
Msa1092090 MtrunA17_Chr6g0476271 25.575 391 252 13 2 378 6 371 1.24e-19 89.7
Msa1092090 MtrunA17_Chr3g0080461 22.938 388 236 14 1 372 41 381 1.46e-19 89.7
Msa1092090 MtrunA17_Chr4g0010541 25.260 384 238 13 4 378 9 352 1.55e-19 89.0
Msa1092090 MtrunA17_Chr2g0291151 26.031 388 225 19 4 353 5 368 1.56e-19 89.7
Msa1092090 MtrunA17_Chr3g0078161 25.935 401 223 19 1 372 14 369 1.88e-19 89.0
Msa1092090 MtrunA17_Chr3g0080191 26.316 323 212 12 1 313 31 337 2.70e-19 89.0
Msa1092090 MtrunA17_Chr3g0081901 24.932 369 232 15 4 350 44 389 2.91e-19 89.0
Msa1092090 MtrunA17_Chr3g0080291 24.051 395 232 15 1 372 36 385 3.01e-19 88.6
Msa1092090 MtrunA17_Chr6g0468711 24.250 400 242 16 1 372 36 402 5.26e-19 88.2
Msa1092090 MtrunA17_Chr3g0078231 23.304 339 209 9 1 324 46 348 5.67e-19 88.2
Msa1092090 MtrunA17_Chr2g0290041 25.737 373 227 16 7 353 9 357 8.47e-19 87.4
Msa1092090 MtrunA17_Chr4g0010561 22.670 397 245 13 4 373 44 405 8.58e-19 87.4
Msa1092090 MtrunA17_Chr7g0214991 23.404 329 215 10 1 312 29 337 1.00e-18 87.4
Msa1092090 MtrunA17_Chr4g0051031 23.483 379 262 11 4 378 8 362 1.04e-18 87.0
Msa1092090 MtrunA17_Chr4g0010531 25.693 397 232 17 4 387 3 349 1.09e-18 87.0
Msa1092090 MtrunA17_Chr6g0483111 26.406 409 240 17 6 373 16 404 1.10e-18 87.4
Msa1092090 MtrunA17_Chr3g0088881 23.834 386 240 15 1 372 34 379 1.49e-18 86.7
Msa1092090 MtrunA17_Chr2g0290061 25.373 335 194 14 2 312 4 306 1.58e-18 86.7
Msa1092090 MtrunA17_Chr3g0082421 25.545 321 193 12 4 312 29 315 1.81e-18 86.3
Msa1092090 MtrunA17_Chr3g0088911 23.529 391 248 15 1 372 32 390 3.69e-18 85.5
Msa1092090 MtrunA17_Chr3g0134731 24.297 391 250 13 4 380 20 378 3.92e-18 85.5
Msa1092090 MtrunA17_Chr3g0079621 24.173 393 234 14 1 372 33 382 3.99e-18 85.5
Msa1092090 MtrunA17_Chr2g0290021 24.868 378 231 15 5 353 7 360 4.15e-18 85.5
Msa1092090 MtrunA17_Chr1g0176211 22.938 388 254 15 1 372 17 375 4.88e-18 85.1
Msa1092090 MtrunA17_Chr2g0287511 24.883 426 237 17 4 374 16 413 5.72e-18 85.1
Msa1092090 MtrunA17_Chr3g0078181 22.959 392 249 14 1 372 33 391 5.92e-18 85.1
Msa1092090 MtrunA17_Chr6g0468701 25.552 317 206 10 4 312 37 331 6.77e-18 84.7
Msa1092090 MtrunA17_Chr4g0061251 25.000 400 235 12 1 380 5 359 1.10e-17 84.0
Msa1092090 MtrunA17_Chr1g0182421 24.934 377 234 13 1 359 1 346 1.21e-17 84.0
Msa1092090 MtrunA17_Chr6g0470221 25.410 366 231 16 4 359 28 361 1.42e-17 84.0
Msa1092090 MtrunA17_Chr4g0057071 24.937 397 262 15 4 374 18 404 2.60e-17 83.2
Msa1092090 MtrunA17_Chr2g0291131 23.989 371 233 12 1 353 1 340 2.74e-17 82.8
Msa1092090 MtrunA17_Chr5g0447811 24.940 417 250 18 7 373 20 423 3.08e-17 83.2
Msa1092090 MtrunA17_Chr4g0062591 24.198 405 235 16 4 380 9 369 3.51e-17 82.4
Msa1092090 MtrunA17_Chr1g0176661 23.773 387 261 14 4 380 13 375 3.61e-17 82.4
Msa1092090 MtrunA17_Chr1g0146541 25.743 404 247 19 4 375 12 394 3.73e-17 82.8
Msa1092090 MtrunA17_Chr6g0477501 23.558 416 246 15 4 374 17 405 3.89e-17 82.8
Msa1092090 MtrunA17_Chr2g0303001 25.954 393 227 17 4 374 25 375 3.95e-17 82.4
Msa1092090 MtrunA17_Chr2g0317101 25.078 319 197 10 1 312 30 313 4.41e-17 82.0
Msa1092090 MtrunA17_Chr4g0009891 25.000 392 234 14 4 380 9 355 4.43e-17 82.0
Msa1092090 MtrunA17_Chr3g0080281 23.698 384 235 17 1 372 22 359 5.62e-17 81.6
Msa1092090 MtrunA17_Chr1g0147551 25.441 397 240 17 2 373 12 377 6.38e-17 81.6
Msa1092090 MtrunA17_Chr3g0080471 23.196 388 229 16 7 372 51 391 6.96e-17 81.6
Msa1092090 MtrunA17_Chr2g0302981 24.878 410 236 17 4 372 14 392 7.63e-17 81.6
Msa1092090 MtrunA17_Chr1g0201051 24.112 394 204 17 4 359 16 352 8.02e-17 81.6
Msa1092090 MtrunA17_Chr5g0418511 23.529 289 174 10 90 357 67 329 9.91e-17 81.3
Msa1092090 MtrunA17_Chr1g0201221 24.872 390 230 17 2 375 34 376 1.01e-16 81.3
Msa1092090 MtrunA17_Chr3g0080541 24.138 377 233 18 4 357 14 360 1.22e-16 80.9
Msa1092090 MtrunA17_Chr8g0353991 24.937 397 241 16 4 380 24 383 1.36e-16 80.9
Msa1092090 MtrunA17_Chr3g0086511 24.607 382 238 17 7 372 38 385 1.57e-16 80.5
Msa1092090 MtrunA17_Chr8g0350891 22.328 421 251 18 7 373 19 417 1.58e-16 80.9
Msa1092090 MtrunA17_Chr4g0041401 23.932 351 207 12 3 340 25 328 1.64e-16 80.5
Msa1092090 MtrunA17_Chr4g0027011 23.136 389 247 15 4 372 30 386 1.89e-16 80.5
Msa1092090 MtrunA17_Chr5g0393561 25.240 313 204 12 1 306 11 300 2.48e-16 79.0
Msa1092090 MtrunA17_Chr5g0423781 24.586 362 216 15 4 351 46 364 2.79e-16 79.7
Msa1092090 MtrunA17_Chr5g0409661 25.994 327 190 12 8 310 44 342 2.96e-16 80.1
Msa1092090 MtrunA17_Chr2g0287581 24.615 390 248 16 1 357 13 389 3.05e-16 79.7
Msa1092090 MtrunA17_Chr7g0228911 23.691 401 231 18 1 372 35 389 3.26e-16 79.7
Msa1092090 MtrunA17_Chr6g0474051 22.084 403 233 12 4 352 48 423 3.48e-16 80.1
Msa1092090 MtrunA17_Chr5g0409701 25.994 327 190 12 8 310 44 342 3.49e-16 80.1
Msa1092090 MtrunA17_Chr4g0035241 24.540 326 202 12 4 306 5 309 3.78e-16 79.3
Msa1092090 MtrunA17_Chr4g0061241 26.020 392 240 17 4 380 8 364 3.88e-16 79.3
Msa1092090 MtrunA17_Chr5g0447481 25.000 432 230 20 2 375 11 406 4.00e-16 79.7
Msa1092090 MtrunA17_Chr3g0090591 23.476 328 212 12 1 313 29 332 4.62e-16 79.3
Msa1092090 MtrunA17_Chr4g0012621 23.757 362 205 13 2 312 28 369 5.15e-16 79.3
Msa1092090 MtrunA17_Chr2g0291141 24.340 341 200 13 3 313 4 316 5.39e-16 79.3
Msa1092090 MtrunA17_Chr2g0287111 23.546 361 236 13 23 372 2 333 6.03e-16 78.6
Msa1092090 MtrunA17_Chr3g0086441 24.297 391 239 13 1 372 31 383 6.86e-16 78.6
Msa1092090 MtrunA17_Chr3g0078461 24.316 329 183 13 7 313 55 339 6.98e-16 79.0
Msa1092090 MtrunA17_Chr2g0303011 27.204 397 218 22 4 372 28 381 7.59e-16 78.6
Msa1092090 MtrunA17_Chr3g0089071 26.330 376 212 16 6 337 18 372 8.29e-16 78.6
Msa1092090 MtrunA17_Chr2g0299051 24.113 423 237 19 4 373 16 407 9.25e-16 78.6
Msa1092090 MtrunA17_Chr2g0303021 25.377 398 227 16 4 372 28 384 9.47e-16 78.2
Msa1092090 MtrunA17_Chr4g0065911 24.938 401 219 16 3 378 16 359 1.02e-15 77.8
Msa1092090 MtrunA17_Chr2g0333411 23.632 402 252 17 4 373 14 392 1.06e-15 78.2
Msa1092090 MtrunA17_Chr5g0397741 25.937 347 211 13 2 312 56 392 1.08e-15 78.6
Msa1092090 MtrunA17_Chr3g0094241 24.339 378 235 20 1 369 48 383 1.12e-15 78.2
Msa1092090 MtrunA17_Chr3g0078431 24.012 329 184 13 7 313 55 339 1.12e-15 78.2
Msa1092090 MtrunA17_Chr8g0370471 30.144 209 121 9 4 205 30 220 1.17e-15 75.9
Msa1092090 MtrunA17_Chr5g0447471 24.936 393 227 15 4 373 9 356 1.23e-15 77.8
Msa1092090 MtrunA17_Chr3g0082441 23.784 370 228 15 1 350 26 361 1.46e-15 77.8
Msa1092090 MtrunA17_Chr3g0091191 22.338 385 233 14 4 372 26 360 2.04e-15 77.0
Msa1092090 MtrunA17_Chr5g0429691 23.020 404 252 12 4 378 10 383 2.54e-15 77.0
Msa1092090 MtrunA17_Chr3g0090301 24.615 390 254 16 4 378 9 373 3.38e-15 76.6
Msa1092090 MtrunA17_Chr4g0066101 22.961 331 206 13 3 319 22 317 5.05e-15 75.9
Msa1092090 MtrunA17_Chr3g0080511 24.505 404 239 18 1 372 232 601 5.68e-15 76.6
Msa1092090 MtrunA17_Chr6g0481641 22.222 405 265 12 4 373 17 406 6.22e-15 75.9
Msa1092090 MtrunA17_Chr2g0294741 23.958 384 257 16 4 375 14 374 6.33e-15 75.9
Msa1092090 MtrunA17_Chr1g0212141 22.864 398 245 14 1 372 26 387 6.75e-15 75.9
Msa1092090 MtrunA17_Chr3g0081931 24.665 373 232 13 1 353 30 373 7.07e-15 75.9
Msa1092090 MtrunA17_Chr8g0361951 24.156 385 222 16 4 357 14 359 7.53e-15 75.5
Msa1092090 MtrunA17_Chr5g0423801 24.119 369 220 16 4 351 46 375 8.28e-15 75.5
Msa1092090 MtrunA17_Chr3g0090281 22.802 364 230 14 4 346 9 342 8.29e-15 75.5
Msa1092090 MtrunA17_Chr6g0487451 24.129 402 255 15 4 375 20 401 8.80e-15 75.5
Msa1092090 MtrunA17_Chr8g0364191 23.659 410 221 19 4 372 22 380 9.45e-15 75.5
Msa1092090 MtrunA17_Chr5g0429271 25.575 348 223 13 3 323 25 363 1.00e-14 75.5
Msa1092090 MtrunA17_Chr3g0086491 23.136 389 243 18 1 372 48 397 1.15e-14 75.1
Msa1092090 MtrunA17_Chr3g0079631 25.153 326 187 12 1 313 38 319 1.21e-14 75.1
Msa1092090 MtrunA17_Chr5g0447281 24.802 379 237 18 4 357 17 372 1.33e-14 74.7
Msa1092090 MtrunA17_Chr3g0080891 25.076 327 175 11 7 313 82 358 1.42e-14 75.1
Msa1092090 MtrunA17_Chr5g0444211 23.171 410 246 16 7 375 19 400 1.48e-14 74.7
Msa1092090 MtrunA17_Chr3g0101891 26.140 329 173 15 1 312 32 307 1.55e-14 74.7
Msa1092090 MtrunA17_Chr4g0066041 23.454 388 251 11 4 378 11 365 1.64e-14 74.3
Msa1092090 MtrunA17_Chr2g0303171 25.121 414 222 19 4 373 29 398 1.66e-14 75.1
Msa1092090 MtrunA17_Chr5g0405671 24.304 395 233 16 4 374 27 379 1.67e-14 74.3
Msa1092090 MtrunA17_Chr5g0447071 24.939 413 255 14 4 377 18 414 1.69e-14 74.7
Msa1092090 MtrunA17_Chr5g0397761 24.390 410 258 15 2 374 56 450 1.71e-14 75.1
Msa1092090 MtrunA17_Chr6g0470191 25.305 328 191 16 4 312 28 320 1.73e-14 74.7
Msa1092090 MtrunA17_Chr8g0356061 25.000 384 249 16 7 376 19 377 2.45e-14 73.9
Msa1092090 MtrunA17_Chr5g0395401 24.848 330 183 12 1 315 38 317 3.05e-14 73.6
Msa1092090 MtrunA17_Chr3g0088891 24.496 347 200 15 1 327 18 322 3.21e-14 73.6
Msa1092090 MtrunA17_Chr3g0101941 26.316 266 159 9 4 254 39 282 3.74e-14 72.8
Msa1092090 MtrunA17_Chr1g0176891 24.112 394 249 16 1 372 1 366 4.49e-14 73.2
Msa1092090 MtrunA17_Chr6g0481501 25.414 362 225 16 3 340 18 358 4.71e-14 73.2
Msa1092090 MtrunA17_Chr6g0461101 22.864 398 252 16 1 372 6 374 4.84e-14 73.2
Msa1092090 MtrunA17_Chr2g0333391 23.587 407 257 14 3 373 13 401 4.85e-14 73.2
Msa1092090 MtrunA17_Chr3g0078171 24.294 354 220 14 1 342 37 354 5.25e-14 73.2
Msa1092090 MtrunA17_Chr5g0405331 23.269 361 212 13 2 312 37 382 5.55e-14 73.6
Msa1092090 MtrunA17_Chr3g0090291 23.171 328 218 12 4 319 9 314 5.80e-14 72.8
Msa1092090 MtrunA17_Chr4g0066071 23.785 391 252 12 1 378 8 365 7.57e-14 72.4
Msa1092090 MtrunA17_Chr1g0174821 25.000 416 238 17 7 376 19 406 8.98e-14 72.4
Msa1092090 MtrunA17_Chr6g0468071 23.433 367 218 15 4 324 39 388 9.44e-14 72.4
Msa1092090 MtrunA17_Chr4g0066431 23.284 335 218 9 4 319 8 322 1.02e-13 72.0
Msa1092090 MtrunA17_Chr1g0199281 26.829 328 169 16 4 312 57 332 1.02e-13 72.4
Msa1092090 MtrunA17_Chr5g0429701 21.429 322 218 8 4 308 7 310 1.32e-13 71.6
Msa1092090 MtrunA17_Chr4g0012741 23.951 405 252 16 4 375 16 397 1.47e-13 71.6
Msa1092090 MtrunA17_Chr5g0424381 23.885 381 250 11 2 349 24 397 1.52e-13 71.6
Msa1092090 MtrunA17_Chr5g0405971 25.965 285 180 10 113 378 71 343 1.67e-13 71.2
Msa1092090 MtrunA17_Chr3g0078421 23.620 326 194 15 1 313 33 316 1.89e-13 71.2
Msa1092090 MtrunA17_Chr2g0310541 22.667 375 245 13 4 354 12 365 1.96e-13 71.2
Msa1092090 MtrunA17_Chr2g0289991 23.785 391 224 19 2 353 4 359 1.97e-13 71.2
Msa1092090 MtrunA17_Chr4g0010611 23.438 384 252 14 3 378 9 358 2.00e-13 70.9
Msa1092090 MtrunA17_Chr7g0247401 26.923 364 175 20 4 313 16 342 2.62e-13 71.2
Msa1092090 MtrunA17_Chr2g0290011 26.488 336 191 17 4 312 6 312 3.18e-13 70.9
Msa1092090 MtrunA17_Chr8g0350131 24.219 384 249 12 4 376 40 392 3.74e-13 70.5
Msa1092090 MtrunA17_Chr2g0303601 20.580 379 252 11 4 376 8 343 3.75e-13 70.1
Msa1092090 MtrunA17_Chr5g0405441 25.455 330 214 10 2 312 33 349 4.74e-13 70.5
Msa1092090 MtrunA17_Chr2g0307531 26.425 386 237 17 4 375 211 563 5.38e-13 70.5
Msa1092090 MtrunA17_Chr5g0396471 23.733 375 211 14 1 333 29 370 6.53e-13 69.7
Msa1092090 MtrunA17_Chr1g0169061 22.532 395 258 15 4 375 50 419 7.92e-13 69.7
Msa1092090 MtrunA17_Chr6g0485611 22.807 399 239 14 4 378 70 423 7.94e-13 69.7
Msa1092090 MtrunA17_Chr1g0146521 25.071 351 209 14 2 320 20 348 8.95e-13 69.3
Msa1092090 MtrunA17_Chr8g0388151 22.189 338 193 10 4 312 5 301 9.45e-13 69.3
Msa1092090 MtrunA17_Chr8g0350141 24.619 394 216 13 4 378 10 341 1.10e-12 68.6
Msa1092090 MtrunA17_Chr1g0211571 21.094 384 255 13 4 372 9 359 1.26e-12 68.6
Msa1092090 MtrunA17_Chr7g0224791 23.971 413 227 20 4 373 11 379 1.43e-12 68.6
Msa1092090 MtrunA17_Chr7g0243001 26.954 371 219 20 4 341 14 365 2.98e-12 67.8
Msa1092090 MtrunA17_Chr4g0060161 23.515 404 220 20 4 372 36 385 3.08e-12 67.8
Msa1092090 MtrunA17_Chr1g0212281 24.451 364 228 16 7 361 42 367 3.21e-12 67.8
Msa1092090 MtrunA17_Chr1g0201191 24.084 382 241 15 2 372 47 390 3.31e-12 67.4
Msa1092090 MtrunA17_Chr4g0060121 23.515 404 220 20 4 372 36 385 3.67e-12 67.4
Msa1092090 MtrunA17_Chr2g0293241 22.251 382 252 15 4 369 6 358 4.63e-12 67.0
Msa1092090 MtrunA17_Chr1g0169071 25.228 329 203 14 6 316 19 322 6.72e-12 66.6
Msa1092090 MtrunA17_Chr4g0010621 23.438 384 251 14 3 378 9 357 7.08e-12 66.2
Msa1092090 MtrunA17_Chr4g0010631 22.740 365 242 13 21 378 27 358 7.73e-12 66.2
Msa1092090 MtrunA17_Chr4g0002151 22.179 257 166 9 122 357 89 332 1.11e-11 65.9
Msa1092090 MtrunA17_Chr2g0287491 23.077 403 270 14 2 373 10 403 1.28e-11 65.9
Msa1092090 MtrunA17_Chr4g0068131 24.519 208 144 5 4 208 11 208 2.30e-11 64.3
Msa1092090 MtrunA17_Chr1g0171401 23.773 387 237 17 4 372 58 404 2.49e-11 65.1
Msa1092090 MtrunA17_Chr4g0010691 24.111 253 156 6 4 254 43 261 2.67e-11 63.9
Msa1092090 MtrunA17_Chr4g0012771 23.647 351 215 17 4 323 16 344 4.11e-11 64.3
Msa1092090 MtrunA17_Chr2g0293291 25.000 260 157 13 4 254 6 236 4.35e-11 62.8
Msa1092090 MtrunA17_Chr2g0291161 22.388 335 212 12 4 312 5 317 4.64e-11 64.3
Msa1092090 MtrunA17_Chr1g0173631 24.595 370 220 17 4 355 13 341 5.04e-11 63.9
Msa1092090 MtrunA17_Chr7g0248931 24.569 232 154 7 34 255 17 237 5.20e-11 62.8
Msa1092090 MtrunA17_Chr1g0176691 26.230 244 137 7 151 380 205 419 5.64e-11 63.9
Msa1092090 MtrunA17_Chr4g0073581 22.606 376 231 15 4 344 7 357 7.30e-11 63.5
Msa1092090 MtrunA17_Chr8g0353231 23.894 339 214 14 3 323 11 323 8.26e-11 63.2
Msa1092090 MtrunA17_Chr2g0333381 28.889 270 159 12 4 248 14 275 9.31e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1092090 AT4G12560.1 25.126 398 253 15 1 377 1 374 3.55e-23 100
Msa1092090 AT4G12560.2 25.126 398 253 15 1 377 1 374 3.55e-23 100
Msa1092090 AT4G12560.3 25.126 398 253 15 1 377 1 374 3.55e-23 100
Msa1092090 AT4G22390.1 25.000 344 204 15 1 324 1 310 2.65e-14 74.3
Msa1092090 AT4G22390.2 24.784 347 201 15 1 324 1 310 2.66e-14 74.3
Msa1092090 AT3G06240.1 23.206 418 238 16 4 372 36 419 7.88e-13 70.1
Msa1092090 AT1G12170.1 21.851 389 254 14 4 373 6 363 8.04e-11 63.5

Find 69 sgRNAs with CRISPR-Local

Find 196 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAAGATATCTTCAGGTTTC+TGG 0.094666 7_3:+8304752 Msa1092090:CDS
TCCATCTTTGATACAGTTTA+TGG 0.099018 7_3:+8304082 Msa1092090:CDS
CATTTCTCTAATCCCTTTAC+AGG 0.173221 7_3:-8304557 None:intergenic
CTTACATTTCACATCTTTCT+TGG 0.193513 7_3:+8303910 Msa1092090:CDS
TTTAGTGAATATTATGGTTT+TGG 0.221665 7_3:+8304149 Msa1092090:CDS
TTATTTCAGTCCAATATTTA+TGG 0.222128 7_3:-8304004 None:intergenic
AACCTTGAGGAGCTGTAAAA+TGG 0.227162 7_3:-8304118 None:intergenic
TAAATATTGGACTGAAATAA+TGG 0.233540 7_3:+8304007 Msa1092090:CDS
TGGTAACTTTATGAGGATTT+TGG 0.244298 7_3:-8303736 None:intergenic
TTTGGTTGATGAAAGATTAT+TGG 0.255893 7_3:+8304588 Msa1092090:CDS
GTTGAAAGATCTTTGGTTAA+AGG 0.257436 7_3:+8304208 Msa1092090:CDS
GAAACAGATGAGAGACAAAA+TGG 0.274180 7_3:+8304230 Msa1092090:CDS
ATGGGAGTAATAGGTTTCTT+TGG 0.307329 7_3:+8304681 Msa1092090:CDS
AATAAGAGCTGCTAGATATA+TGG 0.316809 7_3:+8304787 Msa1092090:CDS
ACAATTCTGACCATAAATAT+TGG 0.318905 7_3:+8303994 Msa1092090:CDS
GATGGATTCATCATTACATT+TGG 0.326084 7_3:-8304065 None:intergenic
GAATTAGAATGCTCAATCTT+TGG 0.332900 7_3:-8304467 None:intergenic
CTATTGCTGGTAACTTTATG+AGG 0.343221 7_3:-8303743 None:intergenic
ACATGGTCGATGAACGGTTT+AGG 0.346638 7_3:+8304432 Msa1092090:CDS
GTCATTGTTTATCCTGTAAA+GGG 0.361651 7_3:+8304545 Msa1092090:CDS
CAGTGATTTATAAGCTTGTT+GGG 0.370830 7_3:+8304654 Msa1092090:CDS
TAGAGAAATGGTTTGATGTT+TGG 0.375876 7_3:+8304570 Msa1092090:CDS
TTGGTTGATGAAAGATTATT+GGG 0.379665 7_3:+8304589 Msa1092090:CDS
CCAGTGATTTATAAGCTTGT+TGG 0.381944 7_3:+8304653 Msa1092090:CDS
TTTGATGAATCTGATACTAT+TGG 0.385243 7_3:+8304521 Msa1092090:CDS
TGGAAATATAAGATATCTTC+AGG 0.389661 7_3:+8304745 Msa1092090:CDS
GCAAATCCATTTGCAAATCA+TGG 0.393739 7_3:+8303778 Msa1092090:CDS
CTGTAAAGGGATTAGAGAAA+TGG 0.411920 7_3:+8304558 Msa1092090:CDS
TGGTCAGAATTGTATTCATA+AGG 0.417754 7_3:-8303984 None:intergenic
GAAATAATGGGTCCTTGTAA+TGG 0.419648 7_3:+8304020 Msa1092090:CDS
AAATAATGGGTCCTTGTAAT+GGG 0.422123 7_3:+8304021 Msa1092090:CDS
ATGAAAGATTATTGGGATGA+AGG 0.426247 7_3:+8304596 Msa1092090:CDS
AATGGGATATACTTTCTAGA+AGG 0.430349 7_3:+8304038 Msa1092090:CDS
TGTCATTGTTTATCCTGTAA+AGG 0.431563 7_3:+8304544 Msa1092090:CDS
AAATATTGGACTGAAATAAT+GGG 0.434645 7_3:+8304008 Msa1092090:CDS
ATTATTGGGATGAAGGGTCT+TGG 0.438909 7_3:+8304603 Msa1092090:CDS
TGGATCAAGTTATATAGTAT+TGG 0.438963 7_3:+8304623 Msa1092090:CDS
TGACTAAAAGATGATCTTGT+TGG 0.444704 7_3:-8303857 None:intergenic
TGCGAAATTGTTGTCATTGG+TGG 0.446619 7_3:+8304366 Msa1092090:CDS
ATGAGAGACAAAATGGGTAT+TGG 0.448057 7_3:+8304237 Msa1092090:CDS
ATCTAACCATGATTTGCAAA+TGG 0.451488 7_3:-8303784 None:intergenic
GCGAAATTGTTGTCATTGGT+GGG 0.458301 7_3:+8304367 Msa1092090:CDS
TTGTTGTGTTGAAAGATCTT+TGG 0.459973 7_3:+8304201 Msa1092090:CDS
ACCATAAACTGTATCAAAGA+TGG 0.469018 7_3:-8304083 None:intergenic
TTGTGCGAAATTGTTGTCAT+TGG 0.471678 7_3:+8304363 Msa1092090:CDS
GAAAGATAGCAATGAGAGGT+TGG 0.477079 7_3:+8304703 Msa1092090:CDS
ATAGTATCAGATTCATCAAA+AGG 0.488870 7_3:-8304518 None:intergenic
GAAGAACCCCAAATATCAAA+AGG 0.492126 7_3:-8304326 None:intergenic
ATTGAGCATTCTAATTCCTC+AGG 0.497942 7_3:+8304473 Msa1092090:CDS
ACCTTGAGGAGCTGTAAAAT+GGG 0.499640 7_3:-8304117 None:intergenic
TAGTAATTAGTAATAAATTG+AGG 0.513157 7_3:-8303819 None:intergenic
TGAAAGATTATTGGGATGAA+GGG 0.520538 7_3:+8304597 Msa1092090:CDS
AAAAGGAAGAGGTAAATCTT+CGG 0.527250 7_3:-8304309 None:intergenic
CATTCGACATGGTCGATGAA+CGG 0.531410 7_3:+8304426 Msa1092090:CDS
AGCTTATAAATCACTGGCAC+AGG 0.536304 7_3:-8304647 None:intergenic
TTGGTGTTGTATGAAGTTGA+GGG 0.539970 7_3:+8304722 Msa1092090:CDS
CCAACAAGCTTATAAATCAC+TGG 0.548782 7_3:-8304653 None:intergenic
CGAAATTGTTGTCATTGGTG+GGG 0.549815 7_3:+8304368 Msa1092090:CDS
CTTCAAAGAGGAAATGAAAG+TGG 0.549958 7_3:+8304824 Msa1092090:CDS
TCAGAATTGTATTCATAAGG+TGG 0.551142 7_3:-8303981 None:intergenic
GTTGGTGTTGTATGAAGTTG+AGG 0.558932 7_3:+8304721 Msa1092090:CDS
CCCCAAATATCAAAAGGAAG+AGG 0.561584 7_3:-8304320 None:intergenic
CAGAATTGTATTCATAAGGT+GGG 0.566867 7_3:-8303980 None:intergenic
AAACAGATGAGAGACAAAAT+GGG 0.582456 7_3:+8304231 Msa1092090:CDS
AGTCTTGTTTCACTTCAAAG+AGG 0.582727 7_3:+8304812 Msa1092090:CDS
GGAGCTGTAAAATGGGATTG+AGG 0.610759 7_3:-8304110 None:intergenic
AGAAAGTATATCCCATTACA+AGG 0.613677 7_3:-8304032 None:intergenic
GTGTTGTATGAAGTTGAGGG+TGG 0.632253 7_3:+8304725 Msa1092090:CDS
TTTGGAAAGATAGCAATGAG+AGG 0.639164 7_3:+8304699 Msa1092090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGTAATTAGTAATAAATTG+AGG - chr7_3:8303822-8303841 None:intergenic 15.0%
!!! GAAGAAATAATATGTTTTTT+GGG - chr7_3:8303948-8303967 None:intergenic 15.0%
!!! AGAAGAAATAATATGTTTTT+TGG - chr7_3:8303949-8303968 None:intergenic 15.0%
!!! TATTCTTTTAGTGAATATTA+TGG + chr7_3:8304143-8304162 Msa1092090:CDS 15.0%
!!! CTTTATAATCATTAGTTTTA+GGG - chr7_3:8304181-8304200 None:intergenic 15.0%
!!! ACTTTATAATCATTAGTTTT+AGG - chr7_3:8304182-8304201 None:intergenic 15.0%
!!! ATAGTTTTATTTCAAATTCT+TGG + chr7_3:8304273-8304292 Msa1092090:CDS 15.0%
!! TAGTAATTAGTAATAAATTG+AGG - chr7_3:8303822-8303841 None:intergenic 15.0%
!!! GAAGAAATAATATGTTTTTT+GGG - chr7_3:8303948-8303967 None:intergenic 15.0%
!!! AGAAGAAATAATATGTTTTT+TGG - chr7_3:8303949-8303968 None:intergenic 15.0%
!!! TATTCTTTTAGTGAATATTA+TGG + chr7_3:8304143-8304162 Msa1092090:CDS 15.0%
!!! CTTTATAATCATTAGTTTTA+GGG - chr7_3:8304181-8304200 None:intergenic 15.0%
!!! ACTTTATAATCATTAGTTTT+AGG - chr7_3:8304182-8304201 None:intergenic 15.0%
!!! ATAGTTTTATTTCAAATTCT+TGG + chr7_3:8304273-8304292 Msa1092090:CDS 15.0%
!! TTATTTCAGTCCAATATTTA+TGG - chr7_3:8304007-8304026 None:intergenic 20.0%
!! TAAATATTGGACTGAAATAA+TGG + chr7_3:8304007-8304026 Msa1092090:CDS 20.0%
!! AAATATTGGACTGAAATAAT+GGG + chr7_3:8304008-8304027 Msa1092090:CDS 20.0%
!!! TTTAGTGAATATTATGGTTT+TGG + chr7_3:8304149-8304168 Msa1092090:CDS 20.0%
!! TTATTTCAGTCCAATATTTA+TGG - chr7_3:8304007-8304026 None:intergenic 20.0%
!! TAAATATTGGACTGAAATAA+TGG + chr7_3:8304007-8304026 Msa1092090:CDS 20.0%
!! AAATATTGGACTGAAATAAT+GGG + chr7_3:8304008-8304027 Msa1092090:CDS 20.0%
!!! TTTAGTGAATATTATGGTTT+TGG + chr7_3:8304149-8304168 Msa1092090:CDS 20.0%
!! ATTTTGGATACTAAATCTTG+TGG - chr7_3:8303723-8303742 None:intergenic 25.0%
! ACAATTCTGACCATAAATAT+TGG + chr7_3:8303994-8304013 Msa1092090:CDS 25.0%
! CTAAAAGAATAAAAACCTTG+AGG - chr7_3:8304134-8304153 None:intergenic 25.0%
!!! GTTTTATTTCAAATTCTTGG+AGG + chr7_3:8304276-8304295 Msa1092090:CDS 25.0%
! ATAGTATCAGATTCATCAAA+AGG - chr7_3:8304521-8304540 None:intergenic 25.0%
! TTTGATGAATCTGATACTAT+TGG + chr7_3:8304521-8304540 Msa1092090:CDS 25.0%
!!! TTTGGTTGATGAAAGATTAT+TGG + chr7_3:8304588-8304607 Msa1092090:CDS 25.0%
!!! TTGGTTGATGAAAGATTATT+GGG + chr7_3:8304589-8304608 Msa1092090:CDS 25.0%
! TGGATCAAGTTATATAGTAT+TGG + chr7_3:8304623-8304642 Msa1092090:CDS 25.0%
! TGGAAATATAAGATATCTTC+AGG + chr7_3:8304745-8304764 Msa1092090:CDS 25.0%
!! TCAATGTTTTTCTTGTAGTT+TGG + chr7_3:8304850-8304869 Msa1092090:CDS 25.0%
!! ATTTTGGATACTAAATCTTG+TGG - chr7_3:8303723-8303742 None:intergenic 25.0%
! ACAATTCTGACCATAAATAT+TGG + chr7_3:8303994-8304013 Msa1092090:CDS 25.0%
! CTAAAAGAATAAAAACCTTG+AGG - chr7_3:8304134-8304153 None:intergenic 25.0%
!!! GTTTTATTTCAAATTCTTGG+AGG + chr7_3:8304276-8304295 Msa1092090:CDS 25.0%
! ATAGTATCAGATTCATCAAA+AGG - chr7_3:8304521-8304540 None:intergenic 25.0%
! TTTGATGAATCTGATACTAT+TGG + chr7_3:8304521-8304540 Msa1092090:CDS 25.0%
!!! TTTGGTTGATGAAAGATTAT+TGG + chr7_3:8304588-8304607 Msa1092090:CDS 25.0%
!!! TTGGTTGATGAAAGATTATT+GGG + chr7_3:8304589-8304608 Msa1092090:CDS 25.0%
! TGGATCAAGTTATATAGTAT+TGG + chr7_3:8304623-8304642 Msa1092090:CDS 25.0%
! TGGAAATATAAGATATCTTC+AGG + chr7_3:8304745-8304764 Msa1092090:CDS 25.0%
!! TCAATGTTTTTCTTGTAGTT+TGG + chr7_3:8304850-8304869 Msa1092090:CDS 25.0%
! TGGTAACTTTATGAGGATTT+TGG - chr7_3:8303739-8303758 None:intergenic 30.0%
!! CATTTTGATAACTCTATTGC+TGG - chr7_3:8303759-8303778 None:intergenic 30.0%
! ATCTAACCATGATTTGCAAA+TGG - chr7_3:8303787-8303806 None:intergenic 30.0%
TGACTAAAAGATGATCTTGT+TGG - chr7_3:8303860-8303879 None:intergenic 30.0%
CTTACATTTCACATCTTTCT+TGG + chr7_3:8303910-8303929 Msa1092090:CDS 30.0%
CAGAATTGTATTCATAAGGT+GGG - chr7_3:8303983-8304002 None:intergenic 30.0%
TCAGAATTGTATTCATAAGG+TGG - chr7_3:8303984-8304003 None:intergenic 30.0%
TGGTCAGAATTGTATTCATA+AGG - chr7_3:8303987-8304006 None:intergenic 30.0%
!! AAATAATGGGTCCTTGTAAT+GGG + chr7_3:8304021-8304040 Msa1092090:CDS 30.0%
! AGAAAGTATATCCCATTACA+AGG - chr7_3:8304035-8304054 None:intergenic 30.0%
AATGGGATATACTTTCTAGA+AGG + chr7_3:8304038-8304057 Msa1092090:CDS 30.0%
! GATGGATTCATCATTACATT+TGG - chr7_3:8304068-8304087 None:intergenic 30.0%
TCCATCTTTGATACAGTTTA+TGG + chr7_3:8304082-8304101 Msa1092090:CDS 30.0%
ACCATAAACTGTATCAAAGA+TGG - chr7_3:8304086-8304105 None:intergenic 30.0%
TTGTTGTGTTGAAAGATCTT+TGG + chr7_3:8304201-8304220 Msa1092090:CDS 30.0%
GTTGAAAGATCTTTGGTTAA+AGG + chr7_3:8304208-8304227 Msa1092090:CDS 30.0%
AAACAGATGAGAGACAAAAT+GGG + chr7_3:8304231-8304250 Msa1092090:CDS 30.0%
AAAAGGAAGAGGTAAATCTT+CGG - chr7_3:8304312-8304331 None:intergenic 30.0%
! TACCTCTTCCTTTTGATATT+TGG + chr7_3:8304318-8304337 Msa1092090:CDS 30.0%
! ACCTCTTCCTTTTGATATTT+GGG + chr7_3:8304319-8304338 Msa1092090:CDS 30.0%
!!! GGTTTTGTTGATGGAAATAT+AGG + chr7_3:8304389-8304408 Msa1092090:CDS 30.0%
GAATTAGAATGCTCAATCTT+TGG - chr7_3:8304470-8304489 None:intergenic 30.0%
!!! TGTTTTAAAACATTCACCTG+AGG - chr7_3:8304492-8304511 None:intergenic 30.0%
TGTCATTGTTTATCCTGTAA+AGG + chr7_3:8304544-8304563 Msa1092090:CDS 30.0%
GTCATTGTTTATCCTGTAAA+GGG + chr7_3:8304545-8304564 Msa1092090:CDS 30.0%
TAGAGAAATGGTTTGATGTT+TGG + chr7_3:8304570-8304589 Msa1092090:CDS 30.0%
ATGAAAGATTATTGGGATGA+AGG + chr7_3:8304596-8304615 Msa1092090:CDS 30.0%
TGAAAGATTATTGGGATGAA+GGG + chr7_3:8304597-8304616 Msa1092090:CDS 30.0%
! CAGTGATTTATAAGCTTGTT+GGG + chr7_3:8304654-8304673 Msa1092090:CDS 30.0%
!!! TATAAGCTTGTTGGGTTTTA+TGG + chr7_3:8304662-8304681 Msa1092090:CDS 30.0%
!!! ATAAGCTTGTTGGGTTTTAT+GGG + chr7_3:8304663-8304682 Msa1092090:CDS 30.0%
! ATAAGATATCTTCAGGTTTC+TGG + chr7_3:8304752-8304771 Msa1092090:CDS 30.0%
AATAAGAGCTGCTAGATATA+TGG + chr7_3:8304787-8304806 Msa1092090:CDS 30.0%
! TGGTAACTTTATGAGGATTT+TGG - chr7_3:8303739-8303758 None:intergenic 30.0%
!! CATTTTGATAACTCTATTGC+TGG - chr7_3:8303759-8303778 None:intergenic 30.0%
! ATCTAACCATGATTTGCAAA+TGG - chr7_3:8303787-8303806 None:intergenic 30.0%
TGACTAAAAGATGATCTTGT+TGG - chr7_3:8303860-8303879 None:intergenic 30.0%
CTTACATTTCACATCTTTCT+TGG + chr7_3:8303910-8303929 Msa1092090:CDS 30.0%
CAGAATTGTATTCATAAGGT+GGG - chr7_3:8303983-8304002 None:intergenic 30.0%
TCAGAATTGTATTCATAAGG+TGG - chr7_3:8303984-8304003 None:intergenic 30.0%
TGGTCAGAATTGTATTCATA+AGG - chr7_3:8303987-8304006 None:intergenic 30.0%
!! AAATAATGGGTCCTTGTAAT+GGG + chr7_3:8304021-8304040 Msa1092090:CDS 30.0%
! AGAAAGTATATCCCATTACA+AGG - chr7_3:8304035-8304054 None:intergenic 30.0%
AATGGGATATACTTTCTAGA+AGG + chr7_3:8304038-8304057 Msa1092090:CDS 30.0%
! GATGGATTCATCATTACATT+TGG - chr7_3:8304068-8304087 None:intergenic 30.0%
TCCATCTTTGATACAGTTTA+TGG + chr7_3:8304082-8304101 Msa1092090:CDS 30.0%
ACCATAAACTGTATCAAAGA+TGG - chr7_3:8304086-8304105 None:intergenic 30.0%
TTGTTGTGTTGAAAGATCTT+TGG + chr7_3:8304201-8304220 Msa1092090:CDS 30.0%
GTTGAAAGATCTTTGGTTAA+AGG + chr7_3:8304208-8304227 Msa1092090:CDS 30.0%
AAACAGATGAGAGACAAAAT+GGG + chr7_3:8304231-8304250 Msa1092090:CDS 30.0%
AAAAGGAAGAGGTAAATCTT+CGG - chr7_3:8304312-8304331 None:intergenic 30.0%
! TACCTCTTCCTTTTGATATT+TGG + chr7_3:8304318-8304337 Msa1092090:CDS 30.0%
! ACCTCTTCCTTTTGATATTT+GGG + chr7_3:8304319-8304338 Msa1092090:CDS 30.0%
!!! GGTTTTGTTGATGGAAATAT+AGG + chr7_3:8304389-8304408 Msa1092090:CDS 30.0%
GAATTAGAATGCTCAATCTT+TGG - chr7_3:8304470-8304489 None:intergenic 30.0%
!!! TGTTTTAAAACATTCACCTG+AGG - chr7_3:8304492-8304511 None:intergenic 30.0%
TGTCATTGTTTATCCTGTAA+AGG + chr7_3:8304544-8304563 Msa1092090:CDS 30.0%
GTCATTGTTTATCCTGTAAA+GGG + chr7_3:8304545-8304564 Msa1092090:CDS 30.0%
TAGAGAAATGGTTTGATGTT+TGG + chr7_3:8304570-8304589 Msa1092090:CDS 30.0%
ATGAAAGATTATTGGGATGA+AGG + chr7_3:8304596-8304615 Msa1092090:CDS 30.0%
TGAAAGATTATTGGGATGAA+GGG + chr7_3:8304597-8304616 Msa1092090:CDS 30.0%
! CAGTGATTTATAAGCTTGTT+GGG + chr7_3:8304654-8304673 Msa1092090:CDS 30.0%
!!! TATAAGCTTGTTGGGTTTTA+TGG + chr7_3:8304662-8304681 Msa1092090:CDS 30.0%
!!! ATAAGCTTGTTGGGTTTTAT+GGG + chr7_3:8304663-8304682 Msa1092090:CDS 30.0%
! ATAAGATATCTTCAGGTTTC+TGG + chr7_3:8304752-8304771 Msa1092090:CDS 30.0%
AATAAGAGCTGCTAGATATA+TGG + chr7_3:8304787-8304806 Msa1092090:CDS 30.0%
CTATTGCTGGTAACTTTATG+AGG - chr7_3:8303746-8303765 None:intergenic 35.0%
GCAAATCCATTTGCAAATCA+TGG + chr7_3:8303778-8303797 Msa1092090:CDS 35.0%
! ATTCGTAGACCTTTTCTTTG+TGG + chr7_3:8303879-8303898 Msa1092090:CDS 35.0%
!!! GTTTTGAGACCACAAAGAAA+AGG - chr7_3:8303891-8303910 None:intergenic 35.0%
!! GAAATAATGGGTCCTTGTAA+TGG + chr7_3:8304020-8304039 Msa1092090:CDS 35.0%
GAAACAGATGAGAGACAAAA+TGG + chr7_3:8304230-8304249 Msa1092090:CDS 35.0%
ATGAGAGACAAAATGGGTAT+TGG + chr7_3:8304237-8304256 Msa1092090:CDS 35.0%
! CCTCTTCCTTTTGATATTTG+GGG + chr7_3:8304320-8304339 Msa1092090:CDS 35.0%
GAAGAACCCCAAATATCAAA+AGG - chr7_3:8304329-8304348 None:intergenic 35.0%
TTGTGCGAAATTGTTGTCAT+TGG + chr7_3:8304363-8304382 Msa1092090:CDS 35.0%
!!! TGTTGTTTTAGCATTCGACA+TGG + chr7_3:8304415-8304434 Msa1092090:CDS 35.0%
ATTGAGCATTCTAATTCCTC+AGG + chr7_3:8304473-8304492 Msa1092090:CDS 35.0%
CATTTCTCTAATCCCTTTAC+AGG - chr7_3:8304560-8304579 None:intergenic 35.0%
CTGTAAAGGGATTAGAGAAA+TGG + chr7_3:8304558-8304577 Msa1092090:CDS 35.0%
CCAACAAGCTTATAAATCAC+TGG - chr7_3:8304656-8304675 None:intergenic 35.0%
CCAGTGATTTATAAGCTTGT+TGG + chr7_3:8304653-8304672 Msa1092090:CDS 35.0%
!! TTGGGTTTTATGGGAGTAAT+AGG + chr7_3:8304672-8304691 Msa1092090:CDS 35.0%
ATGGGAGTAATAGGTTTCTT+TGG + chr7_3:8304681-8304700 Msa1092090:CDS 35.0%
TTTGGAAAGATAGCAATGAG+AGG + chr7_3:8304699-8304718 Msa1092090:CDS 35.0%
!! TTGGTGTTGTATGAAGTTGA+GGG + chr7_3:8304722-8304741 Msa1092090:CDS 35.0%
!! AGTCTTGTTTCACTTCAAAG+AGG + chr7_3:8304812-8304831 Msa1092090:CDS 35.0%
CTTCAAAGAGGAAATGAAAG+TGG + chr7_3:8304824-8304843 Msa1092090:CDS 35.0%
CTATTGCTGGTAACTTTATG+AGG - chr7_3:8303746-8303765 None:intergenic 35.0%
GCAAATCCATTTGCAAATCA+TGG + chr7_3:8303778-8303797 Msa1092090:CDS 35.0%
! ATTCGTAGACCTTTTCTTTG+TGG + chr7_3:8303879-8303898 Msa1092090:CDS 35.0%
!!! GTTTTGAGACCACAAAGAAA+AGG - chr7_3:8303891-8303910 None:intergenic 35.0%
!! GAAATAATGGGTCCTTGTAA+TGG + chr7_3:8304020-8304039 Msa1092090:CDS 35.0%
GAAACAGATGAGAGACAAAA+TGG + chr7_3:8304230-8304249 Msa1092090:CDS 35.0%
ATGAGAGACAAAATGGGTAT+TGG + chr7_3:8304237-8304256 Msa1092090:CDS 35.0%
! CCTCTTCCTTTTGATATTTG+GGG + chr7_3:8304320-8304339 Msa1092090:CDS 35.0%
GAAGAACCCCAAATATCAAA+AGG - chr7_3:8304329-8304348 None:intergenic 35.0%
TTGTGCGAAATTGTTGTCAT+TGG + chr7_3:8304363-8304382 Msa1092090:CDS 35.0%
!!! TGTTGTTTTAGCATTCGACA+TGG + chr7_3:8304415-8304434 Msa1092090:CDS 35.0%
ATTGAGCATTCTAATTCCTC+AGG + chr7_3:8304473-8304492 Msa1092090:CDS 35.0%
CATTTCTCTAATCCCTTTAC+AGG - chr7_3:8304560-8304579 None:intergenic 35.0%
CTGTAAAGGGATTAGAGAAA+TGG + chr7_3:8304558-8304577 Msa1092090:CDS 35.0%
CCAACAAGCTTATAAATCAC+TGG - chr7_3:8304656-8304675 None:intergenic 35.0%
CCAGTGATTTATAAGCTTGT+TGG + chr7_3:8304653-8304672 Msa1092090:CDS 35.0%
!! TTGGGTTTTATGGGAGTAAT+AGG + chr7_3:8304672-8304691 Msa1092090:CDS 35.0%
ATGGGAGTAATAGGTTTCTT+TGG + chr7_3:8304681-8304700 Msa1092090:CDS 35.0%
TTTGGAAAGATAGCAATGAG+AGG + chr7_3:8304699-8304718 Msa1092090:CDS 35.0%
!! TTGGTGTTGTATGAAGTTGA+GGG + chr7_3:8304722-8304741 Msa1092090:CDS 35.0%
!! AGTCTTGTTTCACTTCAAAG+AGG + chr7_3:8304812-8304831 Msa1092090:CDS 35.0%
CTTCAAAGAGGAAATGAAAG+TGG + chr7_3:8304824-8304843 Msa1092090:CDS 35.0%
ACCTTGAGGAGCTGTAAAAT+GGG - chr7_3:8304120-8304139 None:intergenic 40.0%
AACCTTGAGGAGCTGTAAAA+TGG - chr7_3:8304121-8304140 None:intergenic 40.0%
CCCCAAATATCAAAAGGAAG+AGG - chr7_3:8304323-8304342 None:intergenic 40.0%
TGCGAAATTGTTGTCATTGG+TGG + chr7_3:8304366-8304385 Msa1092090:CDS 40.0%
GCGAAATTGTTGTCATTGGT+GGG + chr7_3:8304367-8304386 Msa1092090:CDS 40.0%
CGAAATTGTTGTCATTGGTG+GGG + chr7_3:8304368-8304387 Msa1092090:CDS 40.0%
ATTATTGGGATGAAGGGTCT+TGG + chr7_3:8304603-8304622 Msa1092090:CDS 40.0%
AGCTTATAAATCACTGGCAC+AGG - chr7_3:8304650-8304669 None:intergenic 40.0%
GAAAGATAGCAATGAGAGGT+TGG + chr7_3:8304703-8304722 Msa1092090:CDS 40.0%
!! GTTGGTGTTGTATGAAGTTG+AGG + chr7_3:8304721-8304740 Msa1092090:CDS 40.0%
! TCATGATCCTCTTTTGAACC+TGG + chr7_3:8304874-8304893 Msa1092090:CDS 40.0%
! CATGATCCTCTTTTGAACCT+GGG + chr7_3:8304875-8304894 Msa1092090:CDS 40.0%
! ATGATCCTCTTTTGAACCTG+GGG + chr7_3:8304876-8304895 Msa1092090:CDS 40.0%
ACCTTGAGGAGCTGTAAAAT+GGG - chr7_3:8304120-8304139 None:intergenic 40.0%
AACCTTGAGGAGCTGTAAAA+TGG - chr7_3:8304121-8304140 None:intergenic 40.0%
CCCCAAATATCAAAAGGAAG+AGG - chr7_3:8304323-8304342 None:intergenic 40.0%
TGCGAAATTGTTGTCATTGG+TGG + chr7_3:8304366-8304385 Msa1092090:CDS 40.0%
GCGAAATTGTTGTCATTGGT+GGG + chr7_3:8304367-8304386 Msa1092090:CDS 40.0%
CGAAATTGTTGTCATTGGTG+GGG + chr7_3:8304368-8304387 Msa1092090:CDS 40.0%
ATTATTGGGATGAAGGGTCT+TGG + chr7_3:8304603-8304622 Msa1092090:CDS 40.0%
AGCTTATAAATCACTGGCAC+AGG - chr7_3:8304650-8304669 None:intergenic 40.0%
GAAAGATAGCAATGAGAGGT+TGG + chr7_3:8304703-8304722 Msa1092090:CDS 40.0%
!! GTTGGTGTTGTATGAAGTTG+AGG + chr7_3:8304721-8304740 Msa1092090:CDS 40.0%
! TCATGATCCTCTTTTGAACC+TGG + chr7_3:8304874-8304893 Msa1092090:CDS 40.0%
! CATGATCCTCTTTTGAACCT+GGG + chr7_3:8304875-8304894 Msa1092090:CDS 40.0%
! ATGATCCTCTTTTGAACCTG+GGG + chr7_3:8304876-8304895 Msa1092090:CDS 40.0%
GGAGCTGTAAAATGGGATTG+AGG - chr7_3:8304113-8304132 None:intergenic 45.0%
! TCCCATTTTACAGCTCCTCA+AGG + chr7_3:8304116-8304135 Msa1092090:CDS 45.0%
!!! CATTGGTGGGGTTTTGTTGA+TGG + chr7_3:8304380-8304399 Msa1092090:CDS 45.0%
CATTCGACATGGTCGATGAA+CGG + chr7_3:8304426-8304445 Msa1092090:CDS 45.0%
ACATGGTCGATGAACGGTTT+AGG + chr7_3:8304432-8304451 Msa1092090:CDS 45.0%
GTGTTGTATGAAGTTGAGGG+TGG + chr7_3:8304725-8304744 Msa1092090:CDS 45.0%
! TGATCCTCTTTTGAACCTGG+GGG + chr7_3:8304877-8304896 Msa1092090:CDS 45.0%
GGAGCTGTAAAATGGGATTG+AGG - chr7_3:8304113-8304132 None:intergenic 45.0%
! TCCCATTTTACAGCTCCTCA+AGG + chr7_3:8304116-8304135 Msa1092090:CDS 45.0%
!!! CATTGGTGGGGTTTTGTTGA+TGG + chr7_3:8304380-8304399 Msa1092090:CDS 45.0%
CATTCGACATGGTCGATGAA+CGG + chr7_3:8304426-8304445 Msa1092090:CDS 45.0%
ACATGGTCGATGAACGGTTT+AGG + chr7_3:8304432-8304451 Msa1092090:CDS 45.0%
GTGTTGTATGAAGTTGAGGG+TGG + chr7_3:8304725-8304744 Msa1092090:CDS 45.0%
! TGATCCTCTTTTGAACCTGG+GGG + chr7_3:8304877-8304896 Msa1092090:CDS 45.0%
TACTCCCCCAGGTTCAAAAG+AGG - chr7_3:8304884-8304903 None:intergenic 50.0%
TACTCCCCCAGGTTCAAAAG+AGG - chr7_3:8304884-8304903 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 8303708 8304904 8303708 ID=Msa1092090;Name=Msa1092090
chr7_3 mRNA 8303708 8304904 8303708 ID=Msa1092090-mRNA-1;Parent=Msa1092090;Name=Msa1092090-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|398
chr7_3 exon 8303708 8304904 8303708 ID=Msa1092090-mRNA-1:exon:2429;Parent=Msa1092090-mRNA-1
chr7_3 CDS 8303708 8304904 8303708 ID=Msa1092090-mRNA-1:cds;Parent=Msa1092090-mRNA-1
Gene Sequence

>Msa1092090

ATGGAGCGTTTGCCACAAGATTTAGTATCCAAAATCCTCATAAAGTTACCAGCAATAGAGTTATCAAAATGCAAATCCATTTGCAAATCATGGTTAGATCTCATAACTAATCCTCAATTTATTACTAATTACTATATTATCTACAACAACCAACAAGATCATCTTTTAGTCATTCGTAGACCTTTTCTTTGTGGTCTCAAAACTTACATTTCACATCTTTCTTGGAATTTTAATGATCCCAAAAAACATATTATTTCTTCTGAGATTTTTAACCCACCTTATGAATACAATTCTGACCATAAATATTGGACTGAAATAATGGGTCCTTGTAATGGGATATACTTTCTAGAAGGTAATCCAAATGTAATGATGAATCCATCTTTGATACAGTTTATGGTTTTGCCTCAATCCCATTTTACAGCTCCTCAAGGTTTTTATTCTTTTAGTGAATATTATGGTTTTGGTTTTGACCCTAAAACTAATGATTATAAAGTTGTTGTGTTGAAAGATCTTTGGTTAAAGGAAACAGATGAGAGACAAAATGGGTATTGGAATGTTGAGTTATATAGTTTTATTTCAAATTCTTGGAGGAAACTTGATGCCGAAGATTTACCTCTTCCTTTTGATATTTGGGGTTCTTCTAGAATCTACACTTTTGTGCGAAATTGTTGTCATTGGTGGGGTTTTGTTGATGGAAATATAGGAGATGTTGTTTTAGCATTCGACATGGTCGATGAACGGTTTAGGAAGATAAAAGTGCCAAAGATTGAGCATTCTAATTCCTCAGGTGAATGTTTTAAAACATTAGTACCTTTTGATGAATCTGATACTATTGGTGTCATTGTTTATCCTGTAAAGGGATTAGAGAAATGGTTTGATGTTTGGTTGATGAAAGATTATTGGGATGAAGGGTCTTGGATCAAGTTATATAGTATTGGACCTGTGCCAGTGATTTATAAGCTTGTTGGGTTTTATGGGAGTAATAGGTTTCTTTGGAAAGATAGCAATGAGAGGTTGGTGTTGTATGAAGTTGAGGGTGGAAATATAAGATATCTTCAGGTTTCTGGAAAGTATGATTCAATAAGAGCTGCTAGATATATGGAAAGTCTTGTTTCACTTCAAAGAGGAAATGAAAGTGGTCATCAATGTTTTTCTTGTAGTTTGGTTCATGATCCTCTTTTGAACCTGGGGGAGTAG

Protein sequence

>Msa1092090

MERLPQDLVSKILIKLPAIELSKCKSICKSWLDLITNPQFITNYYIIYNNQQDHLLVIRRPFLCGLKTYISHLSWNFNDPKKHIISSEIFNPPYEYNSDHKYWTEIMGPCNGIYFLEGNPNVMMNPSLIQFMVLPQSHFTAPQGFYSFSEYYGFGFDPKTNDYKVVVLKDLWLKETDERQNGYWNVELYSFISNSWRKLDAEDLPLPFDIWGSSRIYTFVRNCCHWWGFVDGNIGDVVLAFDMVDERFRKIKVPKIEHSNSSGECFKTLVPFDESDTIGVIVYPVKGLEKWFDVWLMKDYWDEGSWIKLYSIGPVPVIYKLVGFYGSNRFLWKDSNERLVLYEVEGGNIRYLQVSGKYDSIRAARYMESLVSLQRGNESGHQCFSCSLVHDPLLNLGE*