AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0464900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0464900 MtrunA17_Chr3g0116701 99.471 378 2 0 1 378 49 426 0.0 785
Msa0464900 MtrunA17_Chr4g0058241 87.399 373 47 0 1 373 53 425 0.0 693
Msa0464900 MtrunA17_Chr3g0123491 75.741 371 88 1 10 378 57 427 0.0 584
Msa0464900 MtrunA17_Chr3g0139371 67.039 358 114 4 16 371 43 398 4.55e-176 495
Msa0464900 MtrunA17_Chr8g0369241 29.508 366 195 6 45 370 138 480 1.10e-47 173
Msa0464900 MtrunA17_Chr6g0480541 31.609 348 205 7 29 371 881 1200 1.28e-44 165
Msa0464900 MtrunA17_Chr5g0437131 30.088 339 204 7 38 371 395 705 4.47e-42 156
Msa0464900 MtrunA17_Chr8g0370321 29.340 409 205 13 30 372 21 411 1.19e-39 146
Msa0464900 MtrunA17_Chr5g0407121 28.218 404 218 10 30 371 21 414 4.28e-39 144
Msa0464900 MtrunA17_Chr1g0210061 29.477 363 210 10 28 372 592 926 1.84e-37 144
Msa0464900 MtrunA17_Chr6g0480481 32.500 240 106 7 27 266 17 200 2.21e-29 112
Msa0464900 MtrunA17_Chr1g0179611 39.241 158 89 4 32 182 29 186 7.60e-28 114
Msa0464900 MtrunA17_Chr1g0179611 31.461 178 87 6 211 371 319 478 1.87e-17 84.0
Msa0464900 MtrunA17_Chr4g0065851 28.291 357 188 14 31 371 12 316 1.43e-25 108
Msa0464900 MtrunA17_Chr8g0369451 27.628 333 183 11 45 371 3 283 2.45e-25 106
Msa0464900 MtrunA17_Chr2g0320631 36.943 157 92 4 32 181 25 181 3.37e-25 107
Msa0464900 MtrunA17_Chr2g0320631 29.858 211 110 8 181 371 285 477 3.43e-18 86.3
Msa0464900 MtrunA17_Chr4g0027671 36.943 157 92 4 32 181 24 180 4.17e-24 103
Msa0464900 MtrunA17_Chr4g0027671 30.337 178 89 6 211 371 319 478 2.11e-18 86.7
Msa0464900 MtrunA17_Chr8g0392811 28.184 369 193 15 23 371 92 408 5.02e-24 103
Msa0464900 MtrunA17_Chr7g0248461 27.507 349 195 11 35 375 30 328 5.37e-24 102
Msa0464900 MtrunA17_Chr4g0002001 28.045 353 176 13 45 371 3 303 7.87e-24 100
Msa0464900 MtrunA17_Chr5g0409421 26.888 331 188 9 45 371 3 283 8.14e-24 102
Msa0464900 MtrunA17_Chr4g0051261 27.711 332 188 10 45 371 3 287 9.94e-24 99.8
Msa0464900 MtrunA17_Chr5g0397261 27.190 331 188 9 52 375 47 331 1.70e-23 100
Msa0464900 MtrunA17_Chr2g0287271 28.011 357 189 14 31 371 12 316 3.10e-23 101
Msa0464900 MtrunA17_Chr4g0030151 27.246 345 191 13 42 375 34 329 3.50e-23 99.8
Msa0464900 MtrunA17_Chr4g0057791 28.818 347 193 12 43 378 215 518 4.57e-23 100
Msa0464900 MtrunA17_Chr4g0045841 25.455 330 194 10 52 375 61 344 5.33e-23 99.4
Msa0464900 MtrunA17_Chr5g0443351 27.299 348 197 11 34 371 12 313 5.79e-22 97.1
Msa0464900 MtrunA17_Chr6g0483151 25.816 337 191 12 42 371 10 294 5.96e-22 96.7
Msa0464900 MtrunA17_Chr8g0348481 27.108 332 187 10 52 375 43 327 5.96e-22 95.9
Msa0464900 MtrunA17_Chr1g0187371 26.205 332 188 11 51 371 23 308 7.37e-22 95.1
Msa0464900 MtrunA17_Chr3g0099951 25.148 338 194 11 42 371 10 296 1.22e-21 95.5
Msa0464900 MtrunA17_Chr3g0141871 25.072 347 208 9 33 371 17 319 1.42e-21 95.1
Msa0464900 MtrunA17_Chr8g0358921 26.239 343 172 12 51 371 52 335 1.75e-21 94.4
Msa0464900 MtrunA17_Chr3g0096631 28.531 354 185 15 34 371 15 316 2.47e-21 95.9
Msa0464900 MtrunA17_Chr6g0482681 26.724 348 199 11 34 371 79 380 9.51e-21 94.0
Msa0464900 MtrunA17_Chr1g0194201 26.437 348 187 13 43 377 72 363 1.18e-20 92.8
Msa0464900 MtrunA17_Chr8g0339221 25.826 333 188 11 46 371 4 284 1.20e-20 92.8
Msa0464900 MtrunA17_Chr2g0293491 27.545 334 186 12 45 371 3 287 1.78e-20 90.5
Msa0464900 MtrunA17_Chr1g0193081 25.429 350 188 12 43 377 72 363 3.22e-20 91.7
Msa0464900 MtrunA17_Chr7g0270371 24.928 349 191 11 43 377 72 363 3.40e-20 91.3
Msa0464900 MtrunA17_Chr2g0284091 26.074 349 187 12 43 377 37 328 4.26e-20 90.9
Msa0464900 MtrunA17_Chr4g0030231 26.048 334 188 11 52 375 46 330 4.79e-20 90.5
Msa0464900 MtrunA17_Chr8g0378831 25.762 361 208 12 23 371 7 319 8.11e-20 89.7
Msa0464900 MtrunA17_Chr1g0203881 27.536 276 158 8 40 305 35 278 8.38e-20 90.9
Msa0464900 MtrunA17_Chr2g0314321 26.005 373 203 10 26 371 7 333 8.40e-20 91.3
Msa0464900 MtrunA17_Chr2g0277011 25.369 339 184 12 52 377 96 378 1.34e-19 89.7
Msa0464900 MtrunA17_Chr8g0350311 25.215 349 188 12 43 374 136 428 1.69e-19 89.7
Msa0464900 MtrunA17_Chr1g0190131 26.740 273 165 6 38 305 1 243 1.80e-19 87.4
Msa0464900 MtrunA17_Chr4g0038501 28.511 235 131 5 36 263 10 214 1.93e-19 90.5
Msa0464900 MtrunA17_Chr4g0038091 28.936 235 130 5 36 263 10 214 4.50e-19 89.4
Msa0464900 MtrunA17_Chr2g0320011 24.642 349 192 12 43 377 85 376 7.34e-19 87.8
Msa0464900 MtrunA17_Chr3g0093391 26.163 344 192 12 51 376 28 327 1.33e-18 87.4
Msa0464900 MtrunA17_Chr8g0359091 27.119 354 202 12 28 371 10 317 1.55e-18 87.4
Msa0464900 MtrunA17_Chr7g0246591 24.633 341 184 12 52 377 147 429 4.23e-18 85.5
Msa0464900 MtrunA17_Chr3g0127571 31.837 245 125 10 36 268 128 342 7.20e-18 85.1
Msa0464900 MtrunA17_Chr7g0257751 25.291 344 170 13 39 372 51 317 7.52e-18 85.1
Msa0464900 MtrunA17_Chr3g0093571 26.163 344 192 12 51 376 30 329 8.55e-18 84.7
Msa0464900 MtrunA17_Chr1g0205931 27.753 227 135 6 45 265 54 257 1.09e-17 84.7
Msa0464900 MtrunA17_Chr3g0102571 29.515 227 102 9 154 371 189 366 1.22e-17 84.0
Msa0464900 MtrunA17_Chr8g0387401 24.620 329 199 8 52 375 58 342 3.34e-17 82.4
Msa0464900 MtrunA17_Chr6g0478601 26.513 347 177 14 46 371 111 400 3.96e-17 82.8
Msa0464900 MtrunA17_Chr3g0122781 28.358 335 193 10 51 371 421 722 5.66e-17 82.8
Msa0464900 MtrunA17_Chr5g0402551 29.046 241 137 7 36 268 124 338 1.22e-16 81.6
Msa0464900 MtrunA17_Chr1g0170551 26.383 235 133 7 45 272 6 207 1.83e-16 81.6
Msa0464900 MtrunA17_Chr3g0130781 26.331 357 188 13 45 371 17 328 1.98e-16 80.5
Msa0464900 MtrunA17_Chr8g0384301 23.563 348 180 13 36 375 289 558 3.13e-16 80.5
Msa0464900 MtrunA17_Chr7g0267771 23.653 334 182 10 46 376 88 351 4.74e-16 79.3
Msa0464900 MtrunA17_Chr7g0258051 23.704 270 165 8 46 302 16 257 8.49e-16 79.0
Msa0464900 MtrunA17_Chr8g0377071 27.928 333 182 12 51 371 390 676 1.08e-15 79.0
Msa0464900 MtrunA17_Chr7g0242561 24.633 341 174 12 39 371 49 314 1.60e-15 78.2
Msa0464900 MtrunA17_Chr4g0018201 28.395 243 132 8 46 264 759 983 1.81e-15 78.2
Msa0464900 MtrunA17_Chr8g0385341 24.855 346 175 12 40 376 24 293 2.54e-15 77.4
Msa0464900 MtrunA17_Chr7g0245031 27.126 247 142 8 28 268 131 345 2.87e-15 77.0
Msa0464900 MtrunA17_Chr5g0428981 27.984 243 133 8 46 264 763 987 3.12e-15 77.8
Msa0464900 MtrunA17_Chr1g0176421 24.854 342 168 13 40 370 155 418 4.67e-15 76.6
Msa0464900 MtrunA17_Chr4g0045261 26.778 239 145 6 36 268 127 341 8.50e-15 75.9
Msa0464900 MtrunA17_Chr4g0030241 34.815 135 60 4 154 285 10 119 1.42e-14 71.2
Msa0464900 MtrunA17_Chr6g0453711 24.490 343 184 10 46 371 110 394 1.98e-14 74.7
Msa0464900 MtrunA17_Chr7g0272841 25.221 226 142 6 45 265 67 270 2.42e-14 74.7
Msa0464900 MtrunA17_Chr5g0419441 25.446 224 138 3 43 264 236 432 3.59e-14 74.3
Msa0464900 MtrunA17_Chr3g0130151 22.455 334 169 11 52 375 250 503 4.73e-14 73.6
Msa0464900 MtrunA17_Chr4g0001331 28.511 235 132 9 42 269 16 221 5.60e-14 73.2
Msa0464900 MtrunA17_Chr4g0053951 25.379 264 139 12 114 371 194 405 5.71e-14 72.8
Msa0464900 MtrunA17_Chr7g0274941 24.629 337 171 12 45 373 15 276 6.17e-14 71.6
Msa0464900 MtrunA17_Chr4g0061141 25.301 332 185 12 51 371 110 389 6.52e-14 73.2
Msa0464900 MtrunA17_Chr5g0405421 25.075 335 176 10 41 370 94 358 8.97e-14 72.8
Msa0464900 MtrunA17_Chr1g0191221 26.300 327 188 10 51 371 127 406 9.33e-14 72.8
Msa0464900 MtrunA17_Chr2g0286421 24.398 332 190 9 51 372 107 387 1.12e-13 72.4
Msa0464900 MtrunA17_Chr1g0150321 27.302 315 182 12 42 347 9 285 1.34e-13 71.6
Msa0464900 MtrunA17_Chr4g0025671 23.200 250 158 9 45 288 7 228 1.45e-13 72.4
Msa0464900 MtrunA17_Chr7g0218071 24.085 328 195 10 51 371 125 405 1.51e-13 72.0
Msa0464900 MtrunA17_Chr0c02g0489761 22.093 344 183 12 40 374 72 339 1.68e-13 71.6
Msa0464900 MtrunA17_Chr3g0131861 24.629 337 189 10 50 374 101 384 2.62e-13 71.2
Msa0464900 MtrunA17_Chr3g0098951 26.906 223 133 6 46 264 84 280 2.85e-13 71.2
Msa0464900 MtrunA17_Chr7g0234641 24.715 263 147 6 128 342 102 361 3.29e-13 70.5
Msa0464900 MtrunA17_Chr2g0317001 27.734 256 135 10 52 298 21 235 3.41e-13 71.2
Msa0464900 MtrunA17_Chr5g0401371 24.925 333 196 14 46 371 115 400 4.49e-13 70.1
Msa0464900 MtrunA17_Chr2g0317501 24.024 333 188 10 51 371 139 418 6.36e-13 70.1
Msa0464900 MtrunA17_Chr7g0267751 23.193 332 182 10 46 374 135 396 7.85e-13 69.7
Msa0464900 MtrunA17_Chr4g0053821 25.379 264 139 11 114 371 163 374 8.05e-13 69.3
Msa0464900 MtrunA17_Chr8g0386981 25.075 335 166 14 52 378 414 671 8.23e-13 70.1
Msa0464900 MtrunA17_Chr4g0033371 25.877 228 139 6 41 264 67 268 9.51e-13 69.3
Msa0464900 MtrunA17_Chr5g0396361 23.214 336 197 10 51 376 145 429 1.03e-12 69.3
Msa0464900 MtrunA17_Chr3g0114511 27.542 236 125 9 39 263 25 225 1.63e-12 68.6
Msa0464900 MtrunA17_Chr4g0066691 23.867 331 191 10 51 371 109 388 2.43e-12 68.2
Msa0464900 MtrunA17_Chr4g0059951 22.287 341 180 11 40 371 67 331 2.70e-12 68.2
Msa0464900 MtrunA17_Chr8g0383451 25.385 260 141 7 52 295 4 226 3.20e-12 67.8
Msa0464900 MtrunA17_Chr4g0059751 31.973 147 73 4 143 286 191 313 4.61e-12 67.0
Msa0464900 MtrunA17_Chr4g0074111 27.059 255 155 8 42 294 14 239 5.89e-12 66.6
Msa0464900 MtrunA17_Chr3g0102601 25.403 248 120 9 131 371 15 204 5.89e-12 65.5
Msa0464900 MtrunA17_Chr7g0244521 28.340 247 135 8 39 275 5 219 6.68e-12 66.6
Msa0464900 MtrunA17_Chr8g0385971 23.824 340 188 10 50 374 94 377 7.55e-12 66.6
Msa0464900 MtrunA17_Chr5g0428031 29.778 225 125 9 45 264 8 204 1.00e-11 66.2
Msa0464900 MtrunA17_Chr8g0353621 22.378 286 182 8 46 327 10 259 1.01e-11 64.7
Msa0464900 MtrunA17_Chr1g0190831 22.441 254 159 8 45 290 3 226 1.27e-11 66.2
Msa0464900 MtrunA17_Chr4g0030361 26.415 159 114 2 114 269 376 534 1.64e-11 65.9
Msa0464900 MtrunA17_Chr8g0351491 24.454 229 138 7 46 270 16 213 2.00e-11 63.9
Msa0464900 MtrunA17_Chr4g0074811 25.431 232 145 5 40 268 85 291 2.09e-11 65.5
Msa0464900 MtrunA17_Chr1g0173921 23.019 265 163 8 46 297 4 240 2.27e-11 65.5
Msa0464900 MtrunA17_Chr8g0346071 26.087 230 127 7 45 264 16 212 2.81e-11 64.7
Msa0464900 MtrunA17_Chr6g0449691 22.159 352 192 12 27 373 68 342 3.15e-11 64.7
Msa0464900 MtrunA17_Chr5g0432471 26.054 261 161 7 42 297 8 241 3.43e-11 64.7
Msa0464900 MtrunA17_Chr3g0107011 26.230 244 138 7 42 275 10 221 4.22e-11 64.3
Msa0464900 MtrunA17_Chr1g0187581 23.140 242 161 7 52 272 123 360 5.26e-11 63.9
Msa0464900 MtrunA17_Chr7g0260191 22.709 251 158 9 45 288 3 224 5.92e-11 63.9
Msa0464900 MtrunA17_Chr4g0040141 24.629 337 198 11 47 376 131 418 8.49e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0464900 AT4G24740.7 84.987 373 55 1 1 373 16 387 0.0 672
Msa0464900 AT4G24740.1 84.987 373 55 1 1 373 54 425 0.0 671
Msa0464900 AT4G24740.6 87.578 322 40 0 52 373 1 322 0.0 600
Msa0464900 AT4G24740.9 87.578 322 40 0 52 373 1 322 0.0 600
Msa0464900 AT4G24740.2 87.578 322 40 0 52 373 1 322 0.0 600
Msa0464900 AT3G53570.1 77.198 364 80 2 13 373 82 445 0.0 595
Msa0464900 AT3G53570.4 77.198 364 80 2 13 373 82 445 0.0 595
Msa0464900 AT3G53570.2 77.198 364 80 2 13 373 82 445 0.0 595
Msa0464900 AT3G53570.3 77.198 364 80 2 13 373 68 431 0.0 594
Msa0464900 AT3G53570.5 77.198 364 80 2 13 373 68 431 0.0 594
Msa0464900 AT4G24740.3 85.811 296 41 1 1 296 54 348 0.0 535
Msa0464900 AT4G32660.1 65.147 373 125 3 3 371 25 396 0.0 510
Msa0464900 AT4G32660.3 65.147 373 125 3 3 371 17 388 0.0 510
Msa0464900 AT4G24740.4 85.551 263 37 1 1 263 54 315 3.02e-168 473
Msa0464900 AT4G24740.5 89.388 245 26 0 52 296 1 245 2.07e-165 462
Msa0464900 AT4G32660.2 66.867 332 105 3 3 330 25 355 1.50e-164 465
Msa0464900 AT4G32660.4 66.316 285 94 2 88 371 1 284 2.13e-139 398
Msa0464900 AT4G24740.10 81.279 219 41 0 155 373 1 219 1.51e-133 381
Msa0464900 AT4G24740.8 81.279 219 41 0 155 373 1 219 1.51e-133 381
Msa0464900 AT5G35980.2 30.518 367 190 6 45 370 121 463 3.18e-45 166
Msa0464900 AT5G35980.3 30.245 367 191 7 45 370 86 428 9.51e-45 165
Msa0464900 AT5G35980.1 30.163 368 192 7 45 371 121 464 1.20e-44 165
Msa0464900 AT1G13350.3 31.218 394 217 14 4 372 468 832 5.83e-44 162
Msa0464900 AT1G13350.2 31.522 368 197 13 28 372 451 786 1.16e-43 162
Msa0464900 AT1G13350.1 31.522 368 197 13 28 372 424 759 1.32e-43 161
Msa0464900 AT3G53640.1 31.215 362 204 11 28 371 305 639 1.40e-43 160
Msa0464900 AT2G40120.1 31.024 332 196 6 45 371 260 563 4.26e-43 158
Msa0464900 AT1G73450.1 32.239 335 194 7 42 371 837 1143 8.33e-43 160
Msa0464900 AT1G73460.2 32.239 335 194 7 42 371 854 1160 8.53e-43 160
Msa0464900 AT1G73460.1 32.239 335 194 7 42 371 854 1160 8.53e-43 160
Msa0464900 AT3G17750.1 31.232 349 207 7 29 372 810 1130 1.11e-42 159
Msa0464900 AT4G35500.1 29.197 411 207 12 30 371 21 416 9.36e-42 152
Msa0464900 AT3G25840.2 30.194 361 208 10 28 371 337 670 1.13e-41 155
Msa0464900 AT2G17530.1 29.136 405 214 10 30 371 21 415 2.86e-41 150
Msa0464900 AT2G17530.3 29.136 405 214 10 30 371 21 415 2.86e-41 150
Msa0464900 AT3G25840.1 30.110 362 209 10 28 372 599 933 1.27e-40 153
Msa0464900 AT2G17530.2 30.960 323 161 8 30 291 21 342 9.75e-39 142
Msa0464900 AT4G35500.2 28.398 412 210 13 30 371 21 417 3.99e-37 139
Msa0464900 AT3G53030.1 39.241 158 89 4 32 182 27 184 8.89e-28 114
Msa0464900 AT3G53030.1 30.857 175 92 5 211 371 307 466 2.52e-17 84.0
Msa0464900 AT3G44850.1 36.196 163 97 4 27 182 25 187 2.61e-26 110
Msa0464900 AT3G44850.1 33.143 175 88 7 211 371 322 481 7.21e-18 85.5
Msa0464900 AT4G11330.1 28.080 349 193 12 35 375 35 333 2.69e-26 108
Msa0464900 AT1G76540.1 25.000 332 192 9 51 371 19 304 9.91e-26 105
Msa0464900 AT5G22840.1 35.443 158 95 4 32 182 30 187 4.26e-24 104
Msa0464900 AT5G22840.1 32.022 178 86 7 211 371 311 470 4.60e-17 83.2
Msa0464900 AT1G01560.2 28.571 329 186 11 52 375 46 330 5.22e-24 102
Msa0464900 AT1G20930.1 26.205 332 188 10 51 371 21 306 7.94e-24 100
Msa0464900 AT4G13020.8 28.863 343 175 10 45 371 3 292 1.30e-23 101
Msa0464900 AT4G13020.5 28.863 343 175 10 45 371 3 292 1.54e-23 102
Msa0464900 AT5G19010.1 29.096 354 183 15 34 371 15 316 2.03e-23 102
Msa0464900 AT4G19110.1 26.426 333 187 10 45 371 3 283 2.35e-23 101
Msa0464900 AT4G19110.2 26.426 333 187 10 45 371 3 283 2.37e-23 101
Msa0464900 AT4G01370.1 26.829 328 193 9 52 375 49 333 2.61e-23 100
Msa0464900 AT3G59790.1 26.989 352 197 13 32 375 50 349 2.94e-23 100
Msa0464900 AT3G54180.1 27.666 347 183 11 45 371 3 301 5.24e-23 98.6
Msa0464900 AT2G43790.1 27.035 344 192 14 42 375 58 352 1.36e-22 98.6
Msa0464900 AT1G73670.1 28.184 369 197 15 19 371 65 381 1.47e-22 99.8
Msa0464900 AT5G45430.2 26.727 333 186 11 45 371 3 283 1.60e-22 99.4
Msa0464900 AT3G18040.4 29.944 354 180 15 34 371 122 423 1.61e-22 99.8
Msa0464900 AT5G45430.1 26.727 333 186 11 45 371 3 283 1.83e-22 99.0
Msa0464900 AT2G38620.2 28.409 352 176 14 45 371 3 303 2.18e-22 96.7
Msa0464900 AT3G18040.1 29.692 357 183 15 31 371 10 314 2.38e-22 99.0
Msa0464900 AT3G18040.5 29.692 357 183 15 31 371 5 309 2.51e-22 99.0
Msa0464900 AT3G18040.3 29.692 357 183 15 31 371 119 423 2.93e-22 99.0
Msa0464900 AT3G48750.1 26.586 331 193 10 45 371 3 287 4.89e-22 95.5
Msa0464900 AT4G36450.1 26.479 355 202 13 26 371 12 316 5.14e-22 96.7
Msa0464900 AT2G18170.1 25.070 359 213 10 23 371 7 319 6.50e-22 96.3
Msa0464900 AT3G45640.1 27.457 346 189 15 42 375 33 328 7.91e-22 96.3
Msa0464900 AT1G01560.3 28.076 317 179 11 52 363 46 318 2.09e-21 94.4
Msa0464900 AT3G14720.1 27.119 354 198 10 30 371 11 316 2.45e-21 96.3
Msa0464900 AT1G10210.2 27.247 356 209 12 23 371 7 319 3.03e-21 94.4
Msa0464900 AT1G10210.3 27.247 356 209 12 23 371 7 319 3.03e-21 94.4
Msa0464900 AT1G10210.1 27.247 356 209 12 23 371 7 319 3.03e-21 94.4
Msa0464900 AT2G46070.1 25.610 328 197 8 52 375 47 331 3.75e-21 94.4
Msa0464900 AT3G14720.2 27.119 354 198 10 30 371 11 316 3.84e-21 94.7
Msa0464900 AT3G14720.3 27.119 354 198 10 30 371 11 316 3.84e-21 94.7
Msa0464900 AT2G46070.3 25.610 328 197 8 52 375 81 365 4.17e-21 94.4
Msa0464900 AT1G59580.2 25.762 361 208 11 23 371 7 319 6.83e-21 93.6
Msa0464900 AT1G59580.1 25.762 361 208 11 23 371 7 319 6.83e-21 93.6
Msa0464900 AT5G14640.1 25.356 351 187 12 43 377 71 362 8.38e-21 93.6
Msa0464900 AT5G14640.2 25.356 351 187 12 43 377 71 362 8.38e-21 93.6
Msa0464900 AT2G01450.3 27.066 351 200 11 31 371 3 307 1.07e-20 94.0
Msa0464900 AT2G01450.1 27.066 351 200 11 31 371 3 307 1.07e-20 94.0
Msa0464900 AT2G01450.2 27.066 351 200 11 31 371 3 307 1.07e-20 94.0
Msa0464900 AT2G01450.4 27.066 351 200 11 31 371 3 307 1.07e-20 94.0
Msa0464900 AT4G18710.1 25.208 361 175 11 43 377 37 328 2.37e-20 92.0
Msa0464900 AT1G53510.1 27.557 352 199 10 30 371 11 316 2.54e-20 93.2
Msa0464900 AT1G18150.3 27.424 361 196 13 27 371 85 395 3.04e-20 92.8
Msa0464900 AT1G18150.2 27.424 361 196 13 27 371 85 395 3.04e-20 92.8
Msa0464900 AT1G18150.1 27.424 361 196 13 27 371 85 395 3.04e-20 92.8
Msa0464900 AT1G57870.1 26.074 349 187 13 43 377 79 370 1.03e-19 90.5
Msa0464900 AT1G57870.4 26.074 349 187 13 43 377 79 370 1.03e-19 90.5
Msa0464900 AT1G57870.2 26.074 349 187 13 43 377 79 370 1.03e-19 90.5
Msa0464900 AT2G42880.2 27.011 348 198 11 34 371 15 316 1.14e-19 90.9
Msa0464900 AT1G57870.3 26.074 349 187 13 43 377 79 370 1.26e-19 90.5
Msa0464900 AT2G42880.1 27.011 348 198 11 34 371 15 316 1.36e-19 90.9
Msa0464900 AT5G63610.1 26.575 365 185 16 45 376 24 338 1.59e-19 90.1
Msa0464900 AT1G06390.2 25.215 349 180 12 43 371 67 354 2.13e-19 89.4
Msa0464900 AT1G06390.1 25.215 349 180 12 43 371 67 354 2.13e-19 89.4
Msa0464900 AT1G09840.3 25.220 341 182 13 52 377 89 371 2.32e-19 89.4
Msa0464900 AT1G09840.7 25.220 341 182 13 52 377 89 371 2.32e-19 89.4
Msa0464900 AT1G09840.10 25.220 341 182 13 52 377 89 371 2.32e-19 89.4
Msa0464900 AT1G09840.6 25.220 341 182 13 52 377 89 371 2.32e-19 89.4
Msa0464900 AT1G09840.4 25.220 341 182 13 52 377 89 371 2.32e-19 89.4
Msa0464900 AT1G09840.1 25.220 341 182 13 52 377 89 371 2.32e-19 89.4
Msa0464900 AT1G09840.9 25.220 341 182 13 52 377 89 371 2.32e-19 89.4
Msa0464900 AT1G09840.5 25.220 341 182 13 52 377 89 371 2.32e-19 89.4
Msa0464900 AT1G09840.8 25.220 341 182 13 52 377 89 371 2.32e-19 89.4
Msa0464900 AT1G09840.2 25.220 341 182 13 52 377 89 371 2.32e-19 89.4
Msa0464900 AT3G13530.1 28.085 235 132 5 36 263 10 214 2.44e-19 90.5
Msa0464900 AT3G05840.2 24.355 349 193 11 43 377 70 361 2.93e-19 89.0
Msa0464900 AT3G05840.1 24.355 349 193 11 43 377 70 361 2.93e-19 89.0
Msa0464900 AT3G61160.4 25.215 349 190 13 43 377 99 390 3.05e-19 89.0
Msa0464900 AT4G04710.4 25.513 341 180 12 40 371 30 305 3.55e-19 89.4
Msa0464900 AT4G04710.1 25.513 341 180 12 40 371 30 305 3.77e-19 89.4
Msa0464900 AT3G61160.2 25.215 349 190 13 43 377 106 397 4.13e-19 89.0
Msa0464900 AT5G26751.1 24.355 349 193 11 43 377 66 357 4.27e-19 88.6
Msa0464900 AT3G61160.1 25.215 349 190 13 43 377 99 390 4.37e-19 88.6
Msa0464900 AT1G07880.2 24.850 334 192 12 52 375 39 323 5.56e-19 87.8
Msa0464900 AT2G46070.2 25.478 314 187 8 52 361 47 317 6.85e-19 87.0
Msa0464900 AT3G07980.1 28.511 235 131 5 36 263 10 214 7.86e-19 89.0
Msa0464900 AT5G63370.2 25.956 366 202 10 26 371 143 459 8.31e-19 88.2
Msa0464900 AT5G63370.3 25.956 366 202 10 26 371 143 459 8.31e-19 88.2
Msa0464900 AT5G63370.7 26.648 364 202 10 26 371 277 593 9.12e-19 88.6
Msa0464900 AT5G63370.8 26.648 364 202 10 26 371 277 593 9.12e-19 88.6
Msa0464900 AT5G63370.4 26.648 364 202 10 26 371 277 593 9.12e-19 88.6
Msa0464900 AT5G63370.6 26.648 364 202 10 26 371 277 593 9.12e-19 88.6
Msa0464900 AT5G63370.1 26.648 364 202 10 26 371 277 593 9.12e-19 88.6
Msa0464900 AT3G07980.2 28.511 235 131 5 36 263 10 214 9.92e-19 89.0
Msa0464900 AT1G08650.1 24.453 274 173 6 38 305 7 252 1.04e-18 85.9
Msa0464900 AT1G08650.2 24.453 274 173 6 38 305 7 252 1.35e-18 85.5
Msa0464900 AT2G30980.1 25.788 349 178 12 43 371 69 356 1.70e-18 87.0
Msa0464900 AT4G04710.2 24.340 341 171 10 40 371 30 292 2.58e-18 86.7
Msa0464900 AT1G67580.1 27.168 346 168 11 51 371 411 697 2.77e-18 87.0
Msa0464900 AT1G67580.2 27.168 346 168 11 51 371 411 697 2.77e-18 87.0
Msa0464900 AT4G00720.1 24.501 351 190 13 43 377 135 426 4.62e-18 85.9
Msa0464900 AT1G12580.1 29.362 235 130 7 41 268 39 244 6.83e-18 85.5
Msa0464900 AT4G18710.2 27.007 274 130 9 43 291 31 259 1.94e-17 82.0
Msa0464900 AT1G01560.4 30.380 237 134 7 52 283 46 256 1.99e-17 82.0
Msa0464900 AT1G01560.1 30.380 237 134 7 52 283 46 256 1.99e-17 82.0
Msa0464900 AT5G57630.2 30.041 243 133 8 35 271 1 212 7.88e-17 82.0
Msa0464900 AT5G24430.1 27.801 241 140 7 36 268 133 347 8.99e-17 82.4
Msa0464900 AT3G18040.2 31.660 259 126 10 120 371 12 226 9.44e-17 81.6
Msa0464900 AT5G57630.1 30.041 243 133 8 35 271 1 212 9.69e-17 81.6
Msa0464900 AT3G49370.1 27.801 241 140 7 36 268 132 346 1.29e-16 82.0
Msa0464900 AT4G19110.3 27.344 256 131 8 122 371 21 227 1.37e-16 81.3
Msa0464900 AT2G38910.1 27.039 233 140 6 40 268 128 334 1.46e-16 81.6
Msa0464900 AT2G46700.1 28.125 256 146 8 21 268 122 347 2.85e-16 80.9
Msa0464900 AT3G17850.1 27.239 268 151 9 46 295 882 1123 4.51e-16 80.5
Msa0464900 AT5G64960.1 25.723 346 191 12 51 376 31 330 4.81e-16 80.1
Msa0464900 AT3G15220.1 27.481 262 140 10 52 304 21 241 7.51e-16 79.7
Msa0464900 AT5G10270.1 25.145 346 193 12 51 376 31 330 1.06e-15 79.0
Msa0464900 AT5G63370.5 27.239 268 162 6 26 285 277 519 1.98e-15 78.2
Msa0464900 AT5G63370.10 27.239 268 162 6 26 285 277 519 1.98e-15 78.2
Msa0464900 AT1G09000.2 27.727 220 132 6 52 266 75 272 2.06e-15 78.2
Msa0464900 AT3G61160.3 24.627 268 153 9 43 296 99 331 2.08e-15 77.0
Msa0464900 AT3G61160.5 24.627 268 153 9 43 296 99 331 2.28e-15 77.4
Msa0464900 AT3G61160.6 24.627 268 153 9 43 296 106 338 2.41e-15 77.0
Msa0464900 AT1G09000.1 27.727 220 132 6 52 266 75 272 2.47e-15 78.2
Msa0464900 AT5G63370.9 26.296 270 162 6 26 285 143 385 2.50e-15 77.4
Msa0464900 AT3G56760.1 26.778 239 145 6 36 268 114 328 3.49e-15 77.4
Msa0464900 AT3G04530.1 25.403 248 143 9 36 274 5 219 3.72e-15 75.5
Msa0464900 AT4G04700.1 26.582 237 138 7 41 268 23 232 4.01e-15 77.0
Msa0464900 AT3G50530.1 27.801 241 140 7 36 268 138 352 4.59e-15 77.0
Msa0464900 AT5G62310.1 24.207 347 185 13 46 371 754 1043 4.79e-15 77.4
Msa0464900 AT1G74330.3 24.316 329 196 9 51 372 126 408 5.09e-15 77.0
Msa0464900 AT4G21940.3 24.316 329 176 9 46 371 102 360 5.80e-15 76.6
Msa0464900 AT1G54960.1 28.509 228 134 6 45 266 67 271 6.41e-15 76.6
Msa0464900 AT1G54960.2 28.509 228 134 6 45 266 67 271 6.41e-15 76.6
Msa0464900 AT5G50860.1 23.626 364 220 12 21 376 90 403 6.60e-15 76.6
Msa0464900 AT4G21940.2 24.620 329 175 9 46 371 102 360 7.11e-15 76.6
Msa0464900 AT5G50860.2 23.626 364 220 12 21 376 90 403 7.58e-15 76.3
Msa0464900 AT4G21940.1 24.620 329 175 9 46 371 102 360 7.98e-15 76.3
Msa0464900 AT2G41140.1 27.459 244 137 8 36 268 113 327 9.26e-15 76.3
Msa0464900 AT5G12480.1 28.936 235 127 9 39 264 52 255 1.11e-14 75.9
Msa0464900 AT3G06030.1 27.313 227 136 6 45 265 67 270 1.48e-14 75.5
Msa0464900 AT1G69220.1 24.670 227 142 3 40 264 243 442 1.61e-14 75.9
Msa0464900 AT3G19100.1 28.216 241 139 7 36 268 134 348 1.76e-14 75.5
Msa0464900 AT3G08730.1 26.407 231 129 6 46 268 134 331 2.76e-14 74.3
Msa0464900 AT3G08730.2 26.407 231 129 6 46 268 134 331 2.76e-14 74.3
Msa0464900 AT2G34290.1 29.839 248 137 8 52 286 7 230 3.04e-14 72.8
Msa0464900 AT1G50240.3 25.751 233 133 7 46 271 6 205 3.76e-14 74.7
Msa0464900 AT1G50240.2 25.751 233 133 7 46 271 6 205 3.76e-14 74.7
Msa0464900 AT1G53570.7 25.214 234 137 8 52 277 220 423 4.32e-14 73.9
Msa0464900 AT1G53165.1 27.734 256 135 10 52 298 21 235 4.56e-14 74.3
Msa0464900 AT1G53570.6 25.214 234 137 8 52 277 220 423 4.60e-14 73.9
Msa0464900 AT1G07880.1 26.141 241 139 8 52 283 39 249 4.61e-14 72.0
Msa0464900 AT4G29810.1 24.221 289 176 10 52 330 76 331 4.91e-14 73.2
Msa0464900 AT1G53570.4 25.214 234 137 8 52 277 220 423 5.15e-14 73.9
Msa0464900 AT4G29810.2 24.221 289 176 10 52 330 85 340 5.22e-14 73.2
Msa0464900 AT1G53570.1 25.214 234 137 8 52 277 220 423 5.34e-14 73.9
Msa0464900 AT1G53165.2 27.734 256 135 10 52 298 21 235 5.52e-14 73.9
Msa0464900 AT3G51850.3 25.000 336 177 13 40 371 48 312 5.77e-14 73.2
Msa0464900 AT1G53570.2 25.214 234 137 8 52 277 220 423 5.78e-14 73.9
Msa0464900 AT1G53570.3 25.214 234 137 8 52 277 220 423 5.78e-14 73.9
Msa0464900 AT1G53165.3 27.734 256 135 10 52 298 21 235 6.01e-14 73.9
Msa0464900 AT2G17890.1 25.291 344 174 12 36 370 98 367 6.22e-14 73.6
Msa0464900 AT4G29810.3 25.571 219 128 7 52 265 85 273 1.25e-13 71.6
Msa0464900 AT1G09840.11 25.911 247 115 9 144 377 53 244 1.29e-13 71.2
Msa0464900 AT3G51850.1 25.000 336 177 13 40 371 48 312 1.38e-13 72.4
Msa0464900 AT2G41920.1 28.571 252 142 10 53 286 13 244 1.45e-13 71.2
Msa0464900 AT4G10010.2 24.850 334 194 10 51 376 161 445 1.51e-13 72.4
Msa0464900 AT1G71530.2 23.512 336 196 9 51 376 152 436 1.63e-13 72.0
Msa0464900 AT3G08720.1 25.974 231 130 6 46 268 140 337 1.66e-13 72.0
Msa0464900 AT3G08720.3 25.974 231 130 6 46 268 140 337 1.66e-13 72.0
Msa0464900 AT3G08720.4 25.974 231 130 6 46 268 140 337 1.66e-13 72.0
Msa0464900 AT3G08720.2 25.974 231 130 6 46 268 140 337 1.66e-13 72.0
Msa0464900 AT2G23070.1 24.444 225 124 8 154 371 232 417 1.81e-13 72.0
Msa0464900 AT3G51850.2 25.000 336 177 13 40 371 48 312 1.94e-13 72.0
Msa0464900 AT5G67380.2 23.896 385 226 17 4 373 32 364 2.23e-13 71.2
Msa0464900 AT1G71530.1 23.512 336 196 9 51 376 152 436 2.29e-13 72.0
Msa0464900 AT2G23080.1 23.485 264 148 9 114 373 108 321 3.05e-13 70.5
Msa0464900 AT3G44200.2 23.600 250 157 9 45 288 7 228 4.54e-13 71.2
Msa0464900 AT3G44200.1 23.600 250 157 9 45 288 7 228 4.54e-13 71.2
Msa0464900 AT5G04510.2 25.000 236 152 9 40 269 37 253 5.11e-13 70.5
Msa0464900 AT5G27790.1 27.059 255 154 7 46 286 20 256 5.23e-13 69.7
Msa0464900 AT1G74740.1 25.794 252 148 9 42 284 55 276 5.27e-13 70.9
Msa0464900 AT3G53930.2 24.398 332 171 10 46 371 20 277 7.47e-13 70.5
Msa0464900 AT5G04510.3 25.000 236 152 9 40 269 37 253 7.94e-13 68.9
Msa0464900 AT3G53930.1 24.398 332 171 10 46 371 20 277 7.95e-13 70.5
Msa0464900 AT5G04510.1 25.000 236 152 9 40 269 37 253 8.18e-13 70.1
Msa0464900 AT5G39420.1 23.795 332 192 12 51 372 110 390 1.08e-12 70.1
Msa0464900 AT5G55090.1 28.571 140 72 3 128 266 85 197 1.09e-12 69.3
Msa0464900 AT1G48490.3 25.648 347 174 15 46 371 828 1111 1.26e-12 70.1
Msa0464900 AT1G48490.2 25.648 347 174 15 46 371 828 1111 1.26e-12 70.1
Msa0464900 AT1G48490.1 25.648 347 174 15 46 371 828 1111 1.26e-12 70.1
Msa0464900 AT1G48490.4 25.648 347 174 15 46 371 829 1112 1.30e-12 70.1
Msa0464900 AT4G04720.2 24.603 378 199 14 3 371 38 338 1.38e-12 69.3
Msa0464900 AT4G04720.1 24.603 378 199 14 3 371 38 338 1.38e-12 69.3
Msa0464900 AT4G04695.1 24.354 271 165 7 46 305 28 269 2.17e-12 68.6
Msa0464900 AT3G50000.1 25.660 265 141 12 114 373 178 391 2.20e-12 68.6
Msa0464900 AT1G18670.2 23.100 329 201 9 51 372 136 419 2.30e-12 68.9
Msa0464900 AT5G55090.2 28.571 140 72 3 128 266 147 259 2.58e-12 68.6
Msa0464900 AT1G53050.2 25.076 331 187 11 51 371 139 418 2.60e-12 68.9
Msa0464900 AT1G53050.1 25.076 331 187 11 51 371 139 418 2.60e-12 68.9
Msa0464900 AT1G18670.3 23.171 328 200 9 51 371 136 418 2.65e-12 68.9
Msa0464900 AT2G25090.1 26.182 275 157 9 42 290 11 265 2.76e-12 68.2
Msa0464900 AT1G45160.2 23.919 347 182 12 46 371 670 955 2.98e-12 68.9
Msa0464900 AT1G18670.1 23.100 329 201 9 51 372 136 419 2.98e-12 68.6
Msa0464900 AT1G69220.2 25.106 235 139 5 40 264 208 415 3.19e-12 68.6
Msa0464900 AT1G18890.1 23.529 340 173 12 42 371 59 321 3.30e-12 68.2
Msa0464900 AT1G45160.1 23.919 347 182 12 46 371 670 955 3.57e-12 68.6
Msa0464900 AT5G67380.1 25.660 265 141 12 114 373 184 397 3.87e-12 67.8
Msa0464900 AT5G28290.3 21.514 251 163 7 46 290 4 226 4.03e-12 68.2
Msa0464900 AT4G08500.1 27.490 251 131 10 52 289 339 551 4.86e-12 67.8
Msa0464900 AT5G28290.1 21.514 251 163 7 46 290 4 226 4.87e-12 67.8
Msa0464900 AT5G28290.2 21.514 251 163 7 46 290 4 226 4.87e-12 67.8
Msa0464900 AT2G41860.1 24.047 341 176 13 39 371 47 312 4.89e-12 67.8
Msa0464900 AT3G01085.1 22.590 332 195 10 51 371 120 400 6.26e-12 67.4
Msa0464900 AT3G01085.2 22.590 332 195 10 51 371 120 400 6.26e-12 67.4
Msa0464900 AT5G64960.2 23.718 312 183 10 71 376 15 277 6.41e-12 67.0
Msa0464900 AT3G01085.3 22.590 332 195 10 51 371 120 400 7.29e-12 67.4
Msa0464900 AT2G41860.2 23.754 341 177 13 39 371 47 312 9.56e-12 66.6
Msa0464900 AT5G25110.1 25.000 344 203 11 11 344 14 312 1.19e-11 66.2
Msa0464900 AT1G30640.3 24.498 249 157 8 52 274 33 276 1.36e-11 66.2
Msa0464900 AT1G71530.3 23.242 327 190 9 51 367 152 427 1.39e-11 66.2
Msa0464900 AT3G63280.2 22.000 250 161 8 45 288 3 224 1.57e-11 66.2
Msa0464900 AT3G63280.3 22.000 250 161 8 45 288 3 224 1.57e-11 66.2
Msa0464900 AT3G63280.1 22.000 250 161 8 45 288 3 224 1.57e-11 66.2
Msa0464900 AT1G30640.2 24.498 249 157 8 52 274 126 369 1.69e-11 66.2
Msa0464900 AT1G30640.1 24.498 249 157 8 52 274 126 369 1.69e-11 66.2
Msa0464900 AT3G04810.2 21.116 251 164 8 46 290 4 226 1.77e-11 66.2
Msa0464900 AT3G04810.1 21.116 251 164 8 46 290 4 226 1.77e-11 66.2
Msa0464900 AT3G04810.3 21.116 251 164 8 46 290 4 226 1.77e-11 66.2
Msa0464900 AT3G63280.4 22.000 250 161 8 45 288 57 278 2.03e-11 65.9
Msa0464900 AT1G54610.1 24.251 334 192 9 51 374 123 405 2.51e-11 65.5
Msa0464900 AT1G54610.3 24.251 334 192 9 51 374 123 405 2.51e-11 65.5
Msa0464900 AT1G54610.2 24.251 334 192 9 51 374 123 405 2.51e-11 65.5
Msa0464900 AT3G50530.2 26.482 253 159 9 36 268 138 383 2.68e-11 65.5
Msa0464900 AT2G41910.1 25.764 229 135 7 52 265 12 220 2.74e-11 64.7
Msa0464900 AT2G26980.2 29.075 227 130 8 43 264 11 211 3.38e-11 63.5
Msa0464900 AT2G20470.3 25.106 235 147 6 52 264 130 357 3.38e-11 65.1
Msa0464900 AT2G34650.1 24.627 268 156 8 46 273 75 336 3.48e-11 64.7
Msa0464900 AT4G38230.4 23.636 330 177 10 46 371 24 282 3.62e-11 65.1
Msa0464900 AT4G38230.3 23.636 330 177 10 46 371 24 282 3.62e-11 65.1
Msa0464900 AT2G20470.2 25.106 235 147 6 52 264 130 357 3.87e-11 65.1
Msa0464900 AT2G20470.1 25.106 235 147 6 52 264 130 357 3.87e-11 65.1
Msa0464900 AT3G10540.1 24.336 226 146 9 50 269 48 254 4.05e-11 64.7
Msa0464900 AT4G38230.2 23.636 330 177 10 46 371 54 312 4.31e-11 64.7
Msa0464900 AT1G30270.2 25.141 354 196 14 45 359 30 353 4.42e-11 64.7
Msa0464900 AT1G30270.1 25.141 354 196 14 45 359 30 353 5.12e-11 64.3
Msa0464900 AT4G24400.2 30.088 226 123 10 45 264 8 204 5.20e-11 64.3
Msa0464900 AT3G23340.1 25.926 243 132 10 42 269 5 214 5.70e-11 64.3
Msa0464900 AT4G24400.1 30.088 226 123 10 45 264 8 204 7.12e-11 63.9
Msa0464900 AT3G63340.9 27.308 260 137 9 148 371 127 370 7.92e-11 63.5
Msa0464900 AT2G26980.1 29.515 227 129 8 43 264 11 211 7.95e-11 63.5
Msa0464900 AT2G26980.4 29.515 227 129 8 43 264 21 221 8.18e-11 63.5
Msa0464900 AT2G26980.3 29.515 227 129 8 43 264 11 211 8.29e-11 63.5
Msa0464900 AT5G58380.1 25.941 239 145 6 42 275 8 219 8.95e-11 63.5
Msa0464900 AT2G26980.5 29.515 227 129 8 43 264 11 211 9.90e-11 63.5

Find 96 sgRNAs with CRISPR-Local

Find 192 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCACTAGTTCTCTGTTTA+AGG 0.094574 3_3:+65118818 Msa0464900:CDS
GCTATAAAAGTTATTGATTT+TGG 0.156084 3_3:+65120298 Msa0464900:CDS
TATCGCACGAACAACTTTAA+TGG 0.165031 3_3:-65119322 None:intergenic
AGGAACATTTGGACAGGTTT+TGG 0.250768 3_3:+65119266 Msa0464900:CDS
TTGTATCAACACGTCATTAT+AGG 0.269120 3_3:+65120356 Msa0464900:CDS
TACATGCAGCTGAATAATTA+TGG 0.282703 3_3:-65121507 None:intergenic
GATCGACATGCTGCATTATA+AGG 0.284242 3_3:-65121102 None:intergenic
GTGTTGATACAATGTAATTT+TGG 0.326386 3_3:-65120345 None:intergenic
CAACAGGTGTTTGAGAAACT+TGG 0.334035 3_3:+65119649 Msa0464900:intron
ATCACTAGTTCTCTGTTTAA+GGG 0.336676 3_3:+65118819 Msa0464900:CDS
CGAGATTGGAAGACAACTAT+TGG 0.340182 3_3:+65119735 Msa0464900:CDS
GGCCAGAGGGTGCAAATTCC+AGG 0.350876 3_3:+65120925 Msa0464900:CDS
CTTGCAGTTGTGTGCAAATA+CGG 0.358647 3_3:+65119509 Msa0464900:intron
ATTGATCTTGTTCGCGAGAT+TGG 0.361635 3_3:+65119721 Msa0464900:CDS
CAGCATTTCAATTTCAATCA+TGG 0.362427 3_3:-65119364 None:intergenic
TTTCAGGCTTCAGATCAGTA+TGG 0.389467 3_3:-65119930 None:intergenic
TGTATCAACACGTCATTATA+GGG 0.391748 3_3:+65120357 Msa0464900:CDS
AAATTCCAGGGAGAGTATTA+AGG 0.404205 3_3:+65120938 Msa0464900:CDS
GGAGCTATCCATGTGATGTT+TGG 0.409101 3_3:+65120553 Msa0464900:CDS
CAACTTGGGAAGCATGATAA+AGG 0.415253 3_3:+65119390 Msa0464900:CDS
TTCAATATCTGCTGCGGTAA+CGG 0.419875 3_3:-65120765 None:intergenic
AAAATGGGTGAAGGAACATT+TGG 0.420108 3_3:+65119255 Msa0464900:CDS
CTAGCTGTAACTCTTTCAAA+TGG 0.421308 3_3:-65121175 None:intergenic
TCCCTGGAATTTGCACCCTC+TGG 0.421349 3_3:-65120927 None:intergenic
TGGAGTGCTGGGACAGAGAA+AGG 0.428372 3_3:+65119286 Msa0464900:CDS
TTTAGAGCATCTTGCCATGA+TGG 0.438127 3_3:+65120728 Msa0464900:CDS
GGCCATTACATGTTTGAGCT+TGG 0.438463 3_3:+65118888 Msa0464900:CDS
GTAAAAGGAGCAAGGTGCTC+TGG 0.446255 3_3:-65120254 None:intergenic
TTTAAGGGAGTTGCTCGAAA+TGG 0.446694 3_3:+65118834 Msa0464900:CDS
TCTTTATGAGAGATCACCTT+AGG 0.449137 3_3:+65121218 Msa0464900:CDS
AACAAAAGTACCTTGTAGTC+GGG 0.450784 3_3:-65119988 None:intergenic
ATCTCGCGAACAAGATCAAT+GGG 0.463178 3_3:-65119718 None:intergenic
CGAAGAAAATCGTATAAGCT+TGG 0.464676 3_3:-65119673 None:intergenic
CCATGTGATGTTTGGAGTGT+GGG 0.465909 3_3:+65120561 Msa0464900:CDS
AAAGTGCAAATGTGAGTGTA+AGG 0.472596 3_3:+65121289 Msa0464900:three_prime_UTR
TCCTCATGGAAAGTTTGAAC+CGG 0.477383 3_3:+65121531 Msa0464900:three_prime_UTR
CTTTGTCGTCATCTCGCCAT+GGG 0.478622 3_3:-65118863 None:intergenic
AATGCAGCATGTCGATCATT+CGG 0.480233 3_3:+65121108 Msa0464900:CDS
TCAGACAGGCTTGGAGGGGA+AGG 0.482903 3_3:-65121384 None:intergenic
TTGAAATGCTGCAGCAACTT+GGG 0.485900 3_3:+65119376 Msa0464900:CDS
GCCATGATGGAGAGGGTGCT+TGG 0.489778 3_3:+65120741 Msa0464900:CDS
CTCCAAGCTCAAACATGTAA+TGG 0.492085 3_3:-65118890 None:intergenic
AATCTCGCGAACAAGATCAA+TGG 0.492792 3_3:-65119719 None:intergenic
AGGTGATCTCTCATAAAGAA+TGG 0.493809 3_3:-65121214 None:intergenic
AAATAAGGATTGGGTCAGAC+AGG 0.501371 3_3:-65121398 None:intergenic
AATGAAGCTTCCTCGACTGC+AGG 0.507820 3_3:+65120965 Msa0464900:CDS
TCTTTGTCGTCATCTCGCCA+TGG 0.511594 3_3:-65118864 None:intergenic
AGGGCACCTGAAGTTATCCT+TGG 0.519240 3_3:+65120376 Msa0464900:CDS
TCAGCTGCATGTATTCCTCA+TGG 0.520684 3_3:+65121517 Msa0464900:three_prime_UTR
GGGTGAAGGAACATTTGGAC+AGG 0.523233 3_3:+65119260 Msa0464900:CDS
ACAGATTCAACTTGGACACT+AGG 0.524144 3_3:-65121264 None:intergenic
TACAGCCTTAATACTCTCCC+TGG 0.524396 3_3:-65120943 None:intergenic
CAGCATGTCGATCATTCGGC+TGG 0.527255 3_3:+65121112 Msa0464900:CDS
AGGATTGGGTCAGACAGGCT+TGG 0.528838 3_3:-65121393 None:intergenic
GTTGTGTGCAAATACGGAAC+TGG 0.532397 3_3:+65119515 Msa0464900:intron
TACATACCAAGGATAACTTC+AGG 0.537818 3_3:-65120382 None:intergenic
GTGCTGGGACAGAGAAAGGA+AGG 0.538248 3_3:+65119290 Msa0464900:CDS
ATTGGGTCAGACAGGCTTGG+AGG 0.538644 3_3:-65121390 None:intergenic
TCTTAAAATCCCCGACTACA+AGG 0.538794 3_3:+65119978 Msa0464900:CDS
ATTGAAATGCTGCAGCAACT+TGG 0.544165 3_3:+65119375 Msa0464900:CDS
TAGCTGTAACTCTTTCAAAT+GGG 0.544735 3_3:-65121174 None:intergenic
GGGGAGACTGGACTGGCCAG+AGG 0.544892 3_3:+65120911 Msa0464900:CDS
GGGAGACTGGACTGGCCAGA+GGG 0.546729 3_3:+65120912 Msa0464900:CDS
TTGGGTCAGACAGGCTTGGA+GGG 0.547873 3_3:-65121389 None:intergenic
TCCATGTGATGTTTGGAGTG+TGG 0.550376 3_3:+65120560 Msa0464900:CDS
CAAATGTGAGTGTAAGGAGA+AGG 0.552877 3_3:+65121295 Msa0464900:three_prime_UTR
AAATGGCTAATCATCTCCTA+AGG 0.558733 3_3:-65121234 None:intergenic
GCTTGTCTGATAAGTGAAGA+TGG 0.565952 3_3:+65121348 Msa0464900:three_prime_UTR
CAACAAAAGTACCTTGTAGT+CGG 0.565973 3_3:-65119989 None:intergenic
ACCAAGCACCCTCTCCATCA+TGG 0.566879 3_3:-65120742 None:intergenic
CTAGTGATATTATGTTCTGA+AGG 0.569411 3_3:-65118804 None:intergenic
CCCACACTCCAAACATCACA+TGG 0.572703 3_3:-65120561 None:intergenic
AGCATGATAAAGGTGGCAAT+CGG 0.573992 3_3:+65119400 Msa0464900:CDS
TGCTGAGAAGTATGTCCGAA+GGG 0.586380 3_3:+65120890 Msa0464900:CDS
TGGCGAGATGACGACAAAGA+TGG 0.586699 3_3:+65118867 Msa0464900:CDS
AGCATCTTGCCATGATGGAG+AGG 0.588758 3_3:+65120733 Msa0464900:CDS
TGGAATGTATAGAACAAATG+TGG 0.595432 3_3:+65121465 Msa0464900:three_prime_UTR
GGACAGAGAAAGGAAGGAGA+TGG 0.597586 3_3:+65119296 Msa0464900:CDS
ATGCTGAGAAGTATGTCCGA+AGG 0.603891 3_3:+65120889 Msa0464900:CDS
GCATCTTGCCATGATGGAGA+GGG 0.605002 3_3:+65120734 Msa0464900:CDS
GCCAGAGGGTGCAAATTCCA+GGG 0.606405 3_3:+65120926 Msa0464900:CDS
TGAAAACAAACCTGCAGTCG+AGG 0.611159 3_3:-65120975 None:intergenic
AAAGTTCAAGAAACACATAC+CGG 0.614868 3_3:-65121550 None:intergenic
TGGGTCAGACAGGCTTGGAG+GGG 0.620994 3_3:-65121388 None:intergenic
ATGATTACAGATAGAGTCCA+CGG 0.624047 3_3:+65119231 Msa0464900:intron
TTTGTCGTCATCTCGCCATG+GGG 0.644464 3_3:-65118862 None:intergenic
CTTGGGAAGCATGATAAAGG+TGG 0.653683 3_3:+65119393 Msa0464900:CDS
CTGAGAAGTATGTCCGAAGG+GGG 0.654634 3_3:+65120892 Msa0464900:CDS
ACTCTCTTCAATATCTGCTG+CGG 0.655396 3_3:-65120771 None:intergenic
GGACATACTTCTCAGCATGT+CGG 0.655396 3_3:-65120884 None:intergenic
TTTGTTCTATACATTCCACT+CGG 0.662912 3_3:-65121460 None:intergenic
ACAAAAGTACCTTGTAGTCG+GGG 0.673356 3_3:-65119987 None:intergenic
TGCGATAAAGAAGTATCGAG+AGG 0.676523 3_3:+65119338 Msa0464900:CDS
ACCGGTTCAAACTTTCCATG+AGG 0.677184 3_3:-65121532 None:intergenic
GCTGAGAAGTATGTCCGAAG+GGG 0.682906 3_3:+65120891 Msa0464900:CDS
TTGTCGTCATCTCGCCATGG+GGG 0.690882 3_3:-65118861 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAAATTTTATAATAAATA+AGG - chr3_3:65121416-65121435 None:intergenic 0.0%
!!! TTTTATAATAAATAAGGATT+GGG - chr3_3:65121410-65121429 None:intergenic 10.0%
!!! ATTTTATAATAAATAAGGAT+TGG - chr3_3:65121411-65121430 None:intergenic 10.0%
!! TATCTGTAATCATATAAAAT+GGG - chr3_3:65119224-65119243 None:intergenic 15.0%
!!! TTTTATTTACTCATAGATTT+TGG + chr3_3:65120024-65120043 Msa0464900:intron 15.0%
!!! TAAATAGTTGATTTTTGTAA+TGG + chr3_3:65120513-65120532 Msa0464900:intron 15.0%
!!! GTAAACTTGTTAATTAATGA+TGG - chr3_3:65118948-65118967 None:intergenic 20.0%
!! ATCTGTAATCATATAAAATG+GGG - chr3_3:65119223-65119242 None:intergenic 20.0%
!! CTATCTGTAATCATATAAAA+TGG - chr3_3:65119225-65119244 None:intergenic 20.0%
!!! TTGTTTTTTTTGTCAAAGAA+GGG + chr3_3:65119846-65119865 Msa0464900:intron 20.0%
!! AATCTATGAGTAAATAAAAC+AGG - chr3_3:65120023-65120042 None:intergenic 20.0%
!!! ATTTTAGACATAATCATACT+AGG + chr3_3:65120048-65120067 Msa0464900:intron 20.0%
!!! GCTATAAAAGTTATTGATTT+TGG + chr3_3:65120298-65120317 Msa0464900:CDS 20.0%
!!! GATTTTTGTAATGGTTTTTT+AGG + chr3_3:65120522-65120541 Msa0464900:intron 20.0%
!!! AAGTATTTGATTGATTTGTG+TGG + chr3_3:65119567-65119586 Msa0464900:intron 25.0%
!!! GTTGTTTTTTTTGTCAAAGA+AGG + chr3_3:65119845-65119864 Msa0464900:intron 25.0%
!!! GTGTTGATACAATGTAATTT+TGG - chr3_3:65120348-65120367 None:intergenic 25.0%
! TGCTGTATCTTTATAAATCA+TGG + chr3_3:65120472-65120491 Msa0464900:intron 25.0%
! ACAAAAATCAACTATTTAGC+TGG - chr3_3:65120511-65120530 None:intergenic 25.0%
!! TGAATACTTCTGAAAAATGT+CGG + chr3_3:65120622-65120641 Msa0464900:intron 25.0%
! AAGCCAATTTAAACACAATA+CGG - chr3_3:65120662-65120681 None:intergenic 25.0%
! ATAACATGAAAAAGAAACAC+TGG - chr3_3:65120858-65120877 None:intergenic 25.0%
!! AGATCTTATACATCTTTTAC+AGG + chr3_3:65121135-65121154 Msa0464900:CDS 25.0%
!! GATCTTATACATCTTTTACA+GGG + chr3_3:65121136-65121155 Msa0464900:CDS 25.0%
!! ATCTTATACATCTTTTACAG+GGG + chr3_3:65121137-65121156 Msa0464900:CDS 25.0%
CTAGTGATATTATGTTCTGA+AGG - chr3_3:65118807-65118826 None:intergenic 30.0%
! TATCACTAGTTCTCTGTTTA+AGG + chr3_3:65118818-65118837 Msa0464900:CDS 30.0%
! ATCACTAGTTCTCTGTTTAA+GGG + chr3_3:65118819-65118838 Msa0464900:CDS 30.0%
ATTCCCTAAACTTTCAAACA+CGG + chr3_3:65119033-65119052 Msa0464900:intron 30.0%
!! TGTAGAGTCATTTTGAACTT+TGG + chr3_3:65119139-65119158 Msa0464900:intron 30.0%
!! GAACTTTGGATGTTCTAAAA+TGG + chr3_3:65119153-65119172 Msa0464900:intron 30.0%
!!! GGATGTTCTAAAATGGATTT+TGG + chr3_3:65119160-65119179 Msa0464900:intron 30.0%
!!! ATGGATTTTGGAGTTTTTGT+TGG + chr3_3:65119172-65119191 Msa0464900:intron 30.0%
CAGCATTTCAATTTCAATCA+TGG - chr3_3:65119367-65119386 None:intergenic 30.0%
TGAATTCAAATGATTGCAAC+AGG + chr3_3:65119633-65119652 Msa0464900:intron 30.0%
! CAAGCTTATACGATTTTCTT+CGG + chr3_3:65119674-65119693 Msa0464900:CDS 30.0%
!!! TTTTTTTTGTCAAAGAAGGG+TGG + chr3_3:65119849-65119868 Msa0464900:intron 30.0%
! GAAACAAGAAGAATGTTTTC+AGG - chr3_3:65119949-65119968 None:intergenic 30.0%
ATCATAACCAACAATTCACT+TGG - chr3_3:65120198-65120217 None:intergenic 30.0%
! ACTTTTATAGCACTTGACTT+GGG - chr3_3:65120289-65120308 None:intergenic 30.0%
! AACTTTTATAGCACTTGACT+TGG - chr3_3:65120290-65120309 None:intergenic 30.0%
!!! ATTTTGGTTTTCTCGTTCAT+AGG - chr3_3:65120332-65120351 None:intergenic 30.0%
TTGTATCAACACGTCATTAT+AGG + chr3_3:65120356-65120375 Msa0464900:CDS 30.0%
TGTATCAACACGTCATTATA+GGG + chr3_3:65120357-65120376 Msa0464900:CDS 30.0%
TATAGTTCGTATACATACCA+AGG - chr3_3:65120396-65120415 None:intergenic 30.0%
GTATGAACAAGATTAACTAC+AGG - chr3_3:65120446-65120465 None:intergenic 30.0%
!!! TGTAATGGTTTTTTAGGACT+TGG + chr3_3:65120528-65120547 Msa0464900:intron 30.0%
!!! GTAATGGTTTTTTAGGACTT+GGG + chr3_3:65120529-65120548 Msa0464900:intron 30.0%
TGTCCGTATTGTGTTTAAAT+TGG + chr3_3:65120656-65120675 Msa0464900:intron 30.0%
TTGAGTAAGTAATTTACCGT+GGG + chr3_3:65120793-65120812 Msa0464900:intron 30.0%
TAGCTGTAACTCTTTCAAAT+GGG - chr3_3:65121177-65121196 None:intergenic 30.0%
!!! AGATGATTAGCCATTTTTAG+AGG + chr3_3:65121241-65121260 Msa0464900:exon 30.0%
! TTTTACAAAAAACAACCGAG+TGG + chr3_3:65121445-65121464 Msa0464900:three_prime_UTR 30.0%
TTTGTTCTATACATTCCACT+CGG - chr3_3:65121463-65121482 None:intergenic 30.0%
TGGAATGTATAGAACAAATG+TGG + chr3_3:65121465-65121484 Msa0464900:three_prime_UTR 30.0%
TACATGCAGCTGAATAATTA+TGG - chr3_3:65121510-65121529 None:intergenic 30.0%
AAAGTTCAAGAAACACATAC+CGG - chr3_3:65121553-65121572 None:intergenic 30.0%
AGTCCGTGTTTGAAAGTTTA+GGG - chr3_3:65119039-65119058 None:intergenic 35.0%
AAGTCCGTGTTTGAAAGTTT+AGG - chr3_3:65119040-65119059 None:intergenic 35.0%
! TTAAGTACTTGTTACACCCT+AGG + chr3_3:65119058-65119077 Msa0464900:intron 35.0%
!!! TTTTGGAGTTTTTGTTGGCT+TGG + chr3_3:65119177-65119196 Msa0464900:intron 35.0%
ATGATTACAGATAGAGTCCA+CGG + chr3_3:65119231-65119250 Msa0464900:intron 35.0%
AAAATGGGTGAAGGAACATT+TGG + chr3_3:65119255-65119274 Msa0464900:CDS 35.0%
TATCGCACGAACAACTTTAA+TGG - chr3_3:65119325-65119344 None:intergenic 35.0%
TTTCCCCAATATACGTGATT+TGG + chr3_3:65119595-65119614 Msa0464900:intron 35.0%
TTCCCCAATATACGTGATTT+GGG + chr3_3:65119596-65119615 Msa0464900:intron 35.0%
CGAAGAAAATCGTATAAGCT+TGG - chr3_3:65119676-65119695 None:intergenic 35.0%
!! AACAAAAGTACCTTGTAGTC+GGG - chr3_3:65119991-65120010 None:intergenic 35.0%
!! CAACAAAAGTACCTTGTAGT+CGG - chr3_3:65119992-65120011 None:intergenic 35.0%
AGACATAATCATACTAGGTG+AGG + chr3_3:65120053-65120072 Msa0464900:intron 35.0%
TTAGCGATAGCATCTATGAT+GGG + chr3_3:65120148-65120167 Msa0464900:intron 35.0%
TAAGTTGCCAAGTGAATTGT+TGG + chr3_3:65120188-65120207 Msa0464900:intron 35.0%
! ACTCTTTTGTAAAAGGAGCA+AGG - chr3_3:65120265-65120284 None:intergenic 35.0%
TACATACCAAGGATAACTTC+AGG - chr3_3:65120385-65120404 None:intergenic 35.0%
ACAATACGGACAACAAAAAC+TGG - chr3_3:65120648-65120667 None:intergenic 35.0%
GTTGAGTAAGTAATTTACCG+TGG + chr3_3:65120792-65120811 Msa0464900:intron 35.0%
ACAATCATAGAAAGTTCCCA+CGG - chr3_3:65120812-65120831 None:intergenic 35.0%
!! AAATTCCAGGGAGAGTATTA+AGG + chr3_3:65120938-65120957 Msa0464900:CDS 35.0%
TCAGTTCTTTACAACAGCAA+TGG + chr3_3:65121023-65121042 Msa0464900:intron 35.0%
CTAGCTGTAACTCTTTCAAA+TGG - chr3_3:65121178-65121197 None:intergenic 35.0%
AGGTGATCTCTCATAAAGAA+TGG - chr3_3:65121217-65121236 None:intergenic 35.0%
TCTTTATGAGAGATCACCTT+AGG + chr3_3:65121218-65121237 Msa0464900:CDS 35.0%
AAATGGCTAATCATCTCCTA+AGG - chr3_3:65121237-65121256 None:intergenic 35.0%
! CACTTTTGACAGATTCAACT+TGG - chr3_3:65121275-65121294 None:intergenic 35.0%
AAAGTGCAAATGTGAGTGTA+AGG + chr3_3:65121289-65121308 Msa0464900:three_prime_UTR 35.0%
TTTAAGGGAGTTGCTCGAAA+TGG + chr3_3:65118834-65118853 Msa0464900:CDS 40.0%
CTCCAAGCTCAAACATGTAA+TGG - chr3_3:65118893-65118912 None:intergenic 40.0%
ACCTGAAACAGGATTACCTA+GGG - chr3_3:65119077-65119096 None:intergenic 40.0%
AACCTGAAACAGGATTACCT+AGG - chr3_3:65119078-65119097 None:intergenic 40.0%
!! GGTAATCCTGTTTCAGGTTT+AGG + chr3_3:65119079-65119098 Msa0464900:intron 40.0%
ATGCTTCCTAAACCTGAAAC+AGG - chr3_3:65119088-65119107 None:intergenic 40.0%
AGATAGAGTCCACGGAAAAA+TGG + chr3_3:65119239-65119258 Msa0464900:intron 40.0%
GATAGAGTCCACGGAAAAAT+GGG + chr3_3:65119240-65119259 Msa0464900:intron 40.0%
! AGGAACATTTGGACAGGTTT+TGG + chr3_3:65119266-65119285 Msa0464900:CDS 40.0%
!! TGCGATAAAGAAGTATCGAG+AGG + chr3_3:65119338-65119357 Msa0464900:CDS 40.0%
ATTGAAATGCTGCAGCAACT+TGG + chr3_3:65119375-65119394 Msa0464900:CDS 40.0%
TTGAAATGCTGCAGCAACTT+GGG + chr3_3:65119376-65119395 Msa0464900:CDS 40.0%
! CAACTTGGGAAGCATGATAA+AGG + chr3_3:65119390-65119409 Msa0464900:CDS 40.0%
AGCATGATAAAGGTGGCAAT+CGG + chr3_3:65119400-65119419 Msa0464900:CDS 40.0%
! CACCTTTTATTCCATTGCGT+CGG + chr3_3:65119470-65119489 Msa0464900:intron 40.0%
AACCGACGCAATGGAATAAA+AGG - chr3_3:65119475-65119494 None:intergenic 40.0%
!! ATTCCATTGCGTCGGTTAAA+TGG + chr3_3:65119478-65119497 Msa0464900:intron 40.0%
!! TTCCATTGCGTCGGTTAAAT+GGG + chr3_3:65119479-65119498 Msa0464900:intron 40.0%
CTTGCAGTTGTGTGCAAATA+CGG + chr3_3:65119509-65119528 Msa0464900:intron 40.0%
TCCCCAATATACGTGATTTG+GGG + chr3_3:65119597-65119616 Msa0464900:intron 40.0%
ACCCCCAAATCACGTATATT+GGG - chr3_3:65119602-65119621 None:intergenic 40.0%
AACCCCCAAATCACGTATAT+TGG - chr3_3:65119603-65119622 None:intergenic 40.0%
CAACAGGTGTTTGAGAAACT+TGG + chr3_3:65119649-65119668 Msa0464900:intron 40.0%
ATCTCGCGAACAAGATCAAT+GGG - chr3_3:65119721-65119740 None:intergenic 40.0%
AATCTCGCGAACAAGATCAA+TGG - chr3_3:65119722-65119741 None:intergenic 40.0%
ATTGATCTTGTTCGCGAGAT+TGG + chr3_3:65119721-65119740 Msa0464900:CDS 40.0%
CGAGATTGGAAGACAACTAT+TGG + chr3_3:65119735-65119754 Msa0464900:CDS 40.0%
TTTCAGGCTTCAGATCAGTA+TGG - chr3_3:65119933-65119952 None:intergenic 40.0%
TCTTAAAATCCCCGACTACA+AGG + chr3_3:65119978-65119997 Msa0464900:CDS 40.0%
!! ACAAAAGTACCTTGTAGTCG+GGG - chr3_3:65119990-65120009 None:intergenic 40.0%
CTTAGCGATAGCATCTATGA+TGG + chr3_3:65120147-65120166 Msa0464900:intron 40.0%
TGATATCTGACATCCAGTGT+TGG + chr3_3:65120214-65120233 Msa0464900:intron 40.0%
! ACTCTGTTGATTACCAACAC+TGG - chr3_3:65120230-65120249 None:intergenic 40.0%
! CTTGGGCACTCTTTTGTAAA+AGG - chr3_3:65120272-65120291 None:intergenic 40.0%
!!! ATGGTTTTTTAGGACTTGGG+TGG + chr3_3:65120532-65120551 Msa0464900:intron 40.0%
GCTTGTATGCTTCTACTTCA+GGG + chr3_3:65120678-65120697 Msa0464900:intron 40.0%
! TTTAGAGCATCTTGCCATGA+TGG + chr3_3:65120728-65120747 Msa0464900:CDS 40.0%
TTCAATATCTGCTGCGGTAA+CGG - chr3_3:65120768-65120787 None:intergenic 40.0%
ACTCTCTTCAATATCTGCTG+CGG - chr3_3:65120774-65120793 None:intergenic 40.0%
!!! TGCAGGTTTGTTTTCAAGTC+TGG + chr3_3:65120982-65121001 Msa0464900:intron 40.0%
GATCGACATGCTGCATTATA+AGG - chr3_3:65121105-65121124 None:intergenic 40.0%
AATGCAGCATGTCGATCATT+CGG + chr3_3:65121108-65121127 Msa0464900:CDS 40.0%
ACAGATTCAACTTGGACACT+AGG - chr3_3:65121267-65121286 None:intergenic 40.0%
CAAATGTGAGTGTAAGGAGA+AGG + chr3_3:65121295-65121314 Msa0464900:three_prime_UTR 40.0%
GCTTGTCTGATAAGTGAAGA+TGG + chr3_3:65121348-65121367 Msa0464900:three_prime_UTR 40.0%
AAATAAGGATTGGGTCAGAC+AGG - chr3_3:65121401-65121420 None:intergenic 40.0%
TCCTCATGGAAAGTTTGAAC+CGG + chr3_3:65121531-65121550 Msa0464900:three_prime_UTR 40.0%
GGCCATTACATGTTTGAGCT+TGG + chr3_3:65118888-65118907 Msa0464900:CDS 45.0%
ACCCTAGGTAATCCTGTTTC+AGG + chr3_3:65119073-65119092 Msa0464900:intron 45.0%
!! TTCCTTCACCCATTTTTCCG+TGG - chr3_3:65119251-65119270 None:intergenic 45.0%
! CTTGGGAAGCATGATAAAGG+TGG + chr3_3:65119393-65119412 Msa0464900:CDS 45.0%
AACCCATTTAACCGACGCAA+TGG - chr3_3:65119484-65119503 None:intergenic 45.0%
CGTATTTGCACACAACTGCA+AGG - chr3_3:65119511-65119530 None:intergenic 45.0%
GTTGTGTGCAAATACGGAAC+TGG + chr3_3:65119515-65119534 Msa0464900:intron 45.0%
CCCCCAAATCACGTATATTG+GGG - chr3_3:65119601-65119620 None:intergenic 45.0%
! CCCCAATATACGTGATTTGG+GGG + chr3_3:65119598-65119617 Msa0464900:intron 45.0%
! TGATTTGGGGGTTAAGACGT+GGG + chr3_3:65119610-65119629 Msa0464900:intron 45.0%
GGAGCTATCCATGTGATGTT+TGG + chr3_3:65120553-65120572 Msa0464900:CDS 45.0%
! TCCATGTGATGTTTGGAGTG+TGG + chr3_3:65120560-65120579 Msa0464900:CDS 45.0%
! CCATGTGATGTTTGGAGTGT+GGG + chr3_3:65120561-65120580 Msa0464900:CDS 45.0%
GGCTTGTATGCTTCTACTTC+AGG + chr3_3:65120677-65120696 Msa0464900:intron 45.0%
GGACATACTTCTCAGCATGT+CGG - chr3_3:65120887-65120906 None:intergenic 45.0%
! ATGCTGAGAAGTATGTCCGA+AGG + chr3_3:65120889-65120908 Msa0464900:CDS 45.0%
! TGCTGAGAAGTATGTCCGAA+GGG + chr3_3:65120890-65120909 Msa0464900:CDS 45.0%
TACAGCCTTAATACTCTCCC+TGG - chr3_3:65120946-65120965 None:intergenic 45.0%
TGAAAACAAACCTGCAGTCG+AGG - chr3_3:65120978-65120997 None:intergenic 45.0%
! GGACACTAGGCCTCTAAAAA+TGG - chr3_3:65121254-65121273 None:intergenic 45.0%
TCAGCTGCATGTATTCCTCA+TGG + chr3_3:65121517-65121536 Msa0464900:three_prime_UTR 45.0%
! ACCGGTTCAAACTTTCCATG+AGG - chr3_3:65121535-65121554 None:intergenic 45.0%
TTTGTCGTCATCTCGCCATG+GGG - chr3_3:65118865-65118884 None:intergenic 50.0%
CTTTGTCGTCATCTCGCCAT+GGG - chr3_3:65118866-65118885 None:intergenic 50.0%
TCTTTGTCGTCATCTCGCCA+TGG - chr3_3:65118867-65118886 None:intergenic 50.0%
TGGCGAGATGACGACAAAGA+TGG + chr3_3:65118867-65118886 Msa0464900:CDS 50.0%
GTCCACGGAAAAATGGGTGA+AGG + chr3_3:65119246-65119265 Msa0464900:CDS 50.0%
GGGTGAAGGAACATTTGGAC+AGG + chr3_3:65119260-65119279 Msa0464900:CDS 50.0%
!!! TTGGACAGGTTTTGGAGTGC+TGG + chr3_3:65119274-65119293 Msa0464900:CDS 50.0%
!!! TGGACAGGTTTTGGAGTGCT+GGG + chr3_3:65119275-65119294 Msa0464900:CDS 50.0%
GGACAGAGAAAGGAAGGAGA+TGG + chr3_3:65119296-65119315 Msa0464900:CDS 50.0%
! GTGATTTGGGGGTTAAGACG+TGG + chr3_3:65119609-65119628 Msa0464900:intron 50.0%
! GTAAAAGGAGCAAGGTGCTC+TGG - chr3_3:65120257-65120276 None:intergenic 50.0%
! AGGGCACCTGAAGTTATCCT+TGG + chr3_3:65120376-65120395 Msa0464900:CDS 50.0%
CCCACACTCCAAACATCACA+TGG - chr3_3:65120564-65120583 None:intergenic 50.0%
! AGCATCTTGCCATGATGGAG+AGG + chr3_3:65120733-65120752 Msa0464900:CDS 50.0%
! GCATCTTGCCATGATGGAGA+GGG + chr3_3:65120734-65120753 Msa0464900:CDS 50.0%
! GCTGAGAAGTATGTCCGAAG+GGG + chr3_3:65120891-65120910 Msa0464900:CDS 50.0%
! CTGAGAAGTATGTCCGAAGG+GGG + chr3_3:65120892-65120911 Msa0464900:CDS 50.0%
AATGAAGCTTCCTCGACTGC+AGG + chr3_3:65120965-65120984 Msa0464900:CDS 50.0%
CTCGAAATGGTTCTCCCCCA+TGG + chr3_3:65118847-65118866 Msa0464900:CDS 55.0%
TTGTCGTCATCTCGCCATGG+GGG - chr3_3:65118864-65118883 None:intergenic 55.0%
!! TGGAGTGCTGGGACAGAGAA+AGG + chr3_3:65119286-65119305 Msa0464900:CDS 55.0%
GTGCTGGGACAGAGAAAGGA+AGG + chr3_3:65119290-65119309 Msa0464900:CDS 55.0%
ACCAAGCACCCTCTCCATCA+TGG - chr3_3:65120745-65120764 None:intergenic 55.0%
! GCCAGAGGGTGCAAATTCCA+GGG + chr3_3:65120926-65120945 Msa0464900:CDS 55.0%
TCCCTGGAATTTGCACCCTC+TGG - chr3_3:65120930-65120949 None:intergenic 55.0%
CAGCATGTCGATCATTCGGC+TGG + chr3_3:65121112-65121131 Msa0464900:CDS 55.0%
TTGGGTCAGACAGGCTTGGA+GGG - chr3_3:65121392-65121411 None:intergenic 55.0%
ATTGGGTCAGACAGGCTTGG+AGG - chr3_3:65121393-65121412 None:intergenic 55.0%
AGGATTGGGTCAGACAGGCT+TGG - chr3_3:65121396-65121415 None:intergenic 55.0%
!! GCCATGATGGAGAGGGTGCT+TGG + chr3_3:65120741-65120760 Msa0464900:CDS 60.0%
GTATGTCCGAAGGGGGAGAC+TGG + chr3_3:65120899-65120918 Msa0464900:CDS 60.0%
! GGCCAGAGGGTGCAAATTCC+AGG + chr3_3:65120925-65120944 Msa0464900:CDS 60.0%
TCAGACAGGCTTGGAGGGGA+AGG - chr3_3:65121387-65121406 None:intergenic 60.0%
TGGGTCAGACAGGCTTGGAG+GGG - chr3_3:65121391-65121410 None:intergenic 60.0%
TCCGAAGGGGGAGACTGGAC+TGG + chr3_3:65120904-65120923 Msa0464900:CDS 65.0%
GCCAGTCCAGTCTCCCCCTT+CGG - chr3_3:65120908-65120927 None:intergenic 65.0%
!! GGGAGACTGGACTGGCCAGA+GGG + chr3_3:65120912-65120931 Msa0464900:CDS 65.0%
!! GGGGAGACTGGACTGGCCAG+AGG + chr3_3:65120911-65120930 Msa0464900:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 65118795 65121579 65118795 ID=Msa0464900;Name=Msa0464900
chr3_3 mRNA 65118795 65121579 65118795 ID=Msa0464900-mRNA-1;Parent=Msa0464900;Name=Msa0464900-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|1|1|1|1|1|10|333|378
chr3_3 exon 65118795 65118930 65118795 ID=Msa0464900-mRNA-1:exon:14437;Parent=Msa0464900-mRNA-1
chr3_3 exon 65119241 65119421 65119241 ID=Msa0464900-mRNA-1:exon:14438;Parent=Msa0464900-mRNA-1
chr3_3 exon 65119516 65119564 65119516 ID=Msa0464900-mRNA-1:exon:14439;Parent=Msa0464900-mRNA-1
chr3_3 exon 65119655 65119769 65119655 ID=Msa0464900-mRNA-1:exon:14440;Parent=Msa0464900-mRNA-1
chr3_3 exon 65119908 65119999 65119908 ID=Msa0464900-mRNA-1:exon:14441;Parent=Msa0464900-mRNA-1
chr3_3 exon 65120247 65120397 65120247 ID=Msa0464900-mRNA-1:exon:14442;Parent=Msa0464900-mRNA-1
chr3_3 exon 65120544 65120608 65120544 ID=Msa0464900-mRNA-1:exon:14443;Parent=Msa0464900-mRNA-1
chr3_3 exon 65120699 65120796 65120699 ID=Msa0464900-mRNA-1:exon:14444;Parent=Msa0464900-mRNA-1
chr3_3 exon 65120884 65120986 65120884 ID=Msa0464900-mRNA-1:exon:14445;Parent=Msa0464900-mRNA-1
chr3_3 exon 65121100 65121579 65121100 ID=Msa0464900-mRNA-1:exon:14446;Parent=Msa0464900-mRNA-1
chr3_3 CDS 65118795 65118930 65118795 ID=Msa0464900-mRNA-1:cds;Parent=Msa0464900-mRNA-1
chr3_3 CDS 65119241 65119421 65119241 ID=Msa0464900-mRNA-1:cds;Parent=Msa0464900-mRNA-1
chr3_3 CDS 65119516 65119564 65119516 ID=Msa0464900-mRNA-1:cds;Parent=Msa0464900-mRNA-1
chr3_3 CDS 65119655 65119769 65119655 ID=Msa0464900-mRNA-1:cds;Parent=Msa0464900-mRNA-1
chr3_3 CDS 65119908 65119999 65119908 ID=Msa0464900-mRNA-1:cds;Parent=Msa0464900-mRNA-1
chr3_3 CDS 65120247 65120397 65120247 ID=Msa0464900-mRNA-1:cds;Parent=Msa0464900-mRNA-1
chr3_3 CDS 65120544 65120608 65120544 ID=Msa0464900-mRNA-1:cds;Parent=Msa0464900-mRNA-1
chr3_3 CDS 65120699 65120796 65120699 ID=Msa0464900-mRNA-1:cds;Parent=Msa0464900-mRNA-1
chr3_3 CDS 65120884 65120986 65120884 ID=Msa0464900-mRNA-1:cds;Parent=Msa0464900-mRNA-1
chr3_3 CDS 65121100 65121246 65121100 ID=Msa0464900-mRNA-1:cds;Parent=Msa0464900-mRNA-1
chr3_3 three_prime_UTR 65121247 65121579 65121247 ID=Msa0464900-mRNA-1:three_prime_utr;Parent=Msa0464900-mRNA-1
Gene Sequence

>Msa0464900

AGCTATGCTCCTTCAGAACATAATATCACTAGTTCTCTGTTTAAGGGAGTTGCTCGAAATGGTTCTCCCCCATGGCGAGATGACGACAAAGATGGCCATTACATGTTTGAGCTTGGAGATAATTTAACTTCTCGCTATAGAGTCCACGGAAAAATGGGTGAAGGAACATTTGGACAGGTTTTGGAGTGCTGGGACAGAGAAAGGAAGGAGATGGTTGCCATTAAAGTTGTTCGTGCGATAAAGAAGTATCGAGAGGCAGCCATGATTGAAATTGAAATGCTGCAGCAACTTGGGAAGCATGATAAAGGTGGCAATCGTTGTGTGCAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATTGTGTTTGAGAAACTTGGACCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGTTCATTTCCCATTGATCTTGTTCGCGAGATTGGAAGACAACTATTGGAATGTGTTGCATTCATGCATGACTTACACATGATCCATACTGATCTGAAGCCTGAAAACATTCTTCTTGTTTCATCAGAGTATCTTAAAATCCCCGACTACAAGAGTTCATCCAGAGCACCTTGCTCCTTTTACAAAAGAGTGCCCAAGTCAAGTGCTATAAAAGTTATTGATTTTGGCAGCACTACCTATGAACGAGAAAACCAAAATTACATTGTATCAACACGTCATTATAGGGCACCTGAAGTTATCCTTGGACTTGGGTGGAGCTATCCATGTGATGTTTGGAGTGTGGGTTGTATATTAGTCGAATTATGCACTGGTGAAGCTCTGTTTCAGACTCACGAAAATTTAGAGCATCTTGCCATGATGGAGAGGGTGCTTGGTCCGTTACCGCAGCAGATATTGAAGAGAGTTGACCGACATGCTGAGAAGTATGTCCGAAGGGGGAGACTGGACTGGCCAGAGGGTGCAAATTCCAGGGAGAGTATTAAGGCTGTAATGAAGCTTCCTCGACTGCAGAACCTTATAATGCAGCATGTCGATCATTCGGCTGGAGATCTTATACATCTTTTACAGGGGCTACTTAGATATGACCCATTTGAAAGAGTTACAGCTAGAGATGCTCTGAGACATCCATTCTTTATGAGAGATCACCTTAGGAGATGA
Protein sequence

>Msa0464900

SYAPSEHNITSSLFKGVARNGSPPWRDDDKDGHYMFELGDNLTSRYRVHGKMGEGTFGQVLECWDRERKEMVAIKVVRAIKKYREAAMIEIEMLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLHMIHTDLKPENILLVSSEYLKIPDYKSSSRAPCSFYKRVPKSSAIKVIDFGSTTYERENQNYIVSTRHYRAPEVILGLGWSYPCDVWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQQILKRVDRHAEKYVRRGRLDWPEGANSRESIKAVMKLPRLQNLIMQHVDHSAGDLIHLLQGLLRYDPFERVTARDALRHPFFMRDHLRR*