Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0099220 | XP_039688311.1 | 95.455 | 308 | 13 | 1 | 1 | 307 | 224 | 531 | 0.0 | 582 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0099220 | A0A396JIH7 | 95.455 | 308 | 13 | 1 | 1 | 307 | 256 | 563 | 0.0 | 582 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003720 | Msa0099220 | 0.805412 | 1.351730e-49 | -8.615850e-47 |
| Msa0011960 | Msa0099220 | 0.831902 | 1.283004e-55 | -8.615850e-47 |
| Msa0012080 | Msa0099220 | 0.807407 | 5.132845e-50 | -8.615850e-47 |
| Msa0029270 | Msa0099220 | 0.820761 | 5.781501e-53 | -8.615850e-47 |
| Msa0032090 | Msa0099220 | 0.857893 | 1.196429e-62 | -8.615850e-47 |
| Msa0032430 | Msa0099220 | 0.848774 | 4.947868e-60 | -8.615850e-47 |
| Msa0032580 | Msa0099220 | 0.862173 | 6.114592e-64 | -8.615850e-47 |
| Msa0033130 | Msa0099220 | 0.838619 | 2.582015e-57 | -8.615850e-47 |
| Msa0037540 | Msa0099220 | -0.810144 | 1.333970e-50 | -8.615850e-47 |
| Msa0037590 | Msa0099220 | -0.805353 | 1.391073e-49 | -8.615850e-47 |
| Msa0040690 | Msa0099220 | 0.841164 | 5.609955e-58 | -8.615850e-47 |
| Msa0043660 | Msa0099220 | 0.856688 | 2.715697e-62 | -8.615850e-47 |
| Msa0047160 | Msa0099220 | 0.823171 | 1.599044e-53 | -8.615850e-47 |
| Msa0053600 | Msa0099220 | 0.940187 | 3.579763e-100 | -8.615850e-47 |
| Msa0054440 | Msa0099220 | 0.855385 | 6.535100e-62 | -8.615850e-47 |
| Msa0054480 | Msa0099220 | 0.832222 | 1.068913e-55 | -8.615850e-47 |
| Msa0061080 | Msa0099220 | 0.822121 | 2.806058e-53 | -8.615850e-47 |
| Msa0070700 | Msa0099220 | 0.834260 | 3.322368e-56 | -8.615850e-47 |
| Msa0074320 | Msa0099220 | 0.829882 | 4.014958e-55 | -8.615850e-47 |
| Msa0079380 | Msa0099220 | 0.836838 | 7.398831e-57 | -8.615850e-47 |
| Msa0079820 | Msa0099220 | 0.855935 | 4.517790e-62 | -8.615850e-47 |
| Msa0080200 | Msa0099220 | 0.842950 | 1.891126e-58 | -8.615850e-47 |
| Msa0094470 | Msa0099220 | 0.830443 | 2.927804e-55 | -8.615850e-47 |
| Msa0098480 | Msa0099220 | 0.888592 | 5.150293e-73 | -8.615850e-47 |
| Msa0099220 | Msa0105620 | 0.858976 | 5.688509e-63 | -8.615850e-47 |
| Msa0099220 | Msa0115130 | 0.844507 | 7.245826e-59 | -8.615850e-47 |
| Msa0099220 | Msa0118590 | 0.836795 | 7.587334e-57 | -8.615850e-47 |
| Msa0099220 | Msa0127020 | 0.831638 | 1.490446e-55 | -8.615850e-47 |
| Msa0099220 | Msa0127050 | 0.825566 | 4.370382e-54 | -8.615850e-47 |
| Msa0099220 | Msa0127390 | 0.847025 | 1.501449e-59 | -8.615850e-47 |
| Msa0099220 | Msa0136070 | 0.835193 | 1.935474e-56 | -8.615850e-47 |
| Msa0099220 | Msa0136100 | 0.815796 | 7.693482e-52 | -8.615850e-47 |
| Msa0099220 | Msa0137550 | 0.856369 | 3.370434e-62 | -8.615850e-47 |
| Msa0099220 | Msa0144370 | 0.843549 | 1.309017e-58 | -8.615850e-47 |
| Msa0099220 | Msa0145730 | 0.807816 | 4.200653e-50 | -8.615850e-47 |
| Msa0099220 | Msa0146770 | 0.838424 | 2.898997e-57 | -8.615850e-47 |
| Msa0099220 | Msa0150820 | 0.830951 | 2.198363e-55 | -8.615850e-47 |
| Msa0099220 | Msa0152140 | 0.814645 | 1.386750e-51 | -8.615850e-47 |
| Msa0099220 | Msa0159170 | 0.803978 | 2.693405e-49 | -8.615850e-47 |
| Msa0099220 | Msa0159340 | 0.814430 | 1.546832e-51 | -8.615850e-47 |
| Msa0099220 | Msa0160550 | 0.833464 | 5.254046e-56 | -8.615850e-47 |
| Msa0099220 | Msa0165660 | 0.854861 | 9.281339e-62 | -8.615850e-47 |
| Msa0099220 | Msa0168230 | 0.810893 | 9.189099e-51 | -8.615850e-47 |
| Msa0099220 | Msa0169280 | 0.826825 | 2.193155e-54 | -8.615850e-47 |
| Msa0099220 | Msa0169310 | 0.802574 | 5.258639e-49 | -8.615850e-47 |
| Msa0099220 | Msa0172070 | 0.852979 | 3.235272e-61 | -8.615850e-47 |
| Msa0099220 | Msa0172970 | 0.865057 | 7.782251e-65 | -8.615850e-47 |
| Msa0099220 | Msa0187120 | 0.825080 | 5.695331e-54 | -8.615850e-47 |
| Msa0099220 | Msa0187690 | 0.830167 | 3.420086e-55 | -8.615850e-47 |
| Msa0099220 | Msa0187930 | 0.825418 | 4.739904e-54 | -8.615850e-47 |
| Msa0099220 | Msa0189300 | 0.830557 | 2.746674e-55 | -8.615850e-47 |
| Msa0099220 | Msa0193120 | 0.812835 | 3.471462e-51 | -8.615850e-47 |
| Msa0099220 | Msa0194540 | 0.826469 | 2.666898e-54 | -8.615850e-47 |
| Msa0099220 | Msa0220720 | 0.820249 | 7.577490e-53 | -8.615850e-47 |
| Msa0099220 | Msa0231660 | 0.831506 | 1.605780e-55 | -8.615850e-47 |
| Msa0099220 | Msa0241470 | 0.825075 | 5.711376e-54 | -8.615850e-47 |
| Msa0099220 | Msa0241620 | 0.825547 | 4.416730e-54 | -8.615850e-47 |
| Msa0099220 | Msa0241640 | 0.802230 | 6.192139e-49 | -8.615850e-47 |
| Msa0099220 | Msa0244780 | 0.827184 | 1.799416e-54 | -8.615850e-47 |
| Msa0099220 | Msa0256840 | 0.800331 | 1.515535e-48 | -8.615850e-47 |
| Msa0099220 | Msa0260680 | 0.802773 | 4.784863e-49 | -8.615850e-47 |
| Msa0099220 | Msa0262310 | 0.809286 | 2.040038e-50 | -8.615850e-47 |
| Msa0099220 | Msa0268130 | 0.828023 | 1.132051e-54 | -8.615850e-47 |
| Msa0099220 | Msa0279220 | 0.831624 | 1.501860e-55 | -8.615850e-47 |
| Msa0099220 | Msa0279240 | 0.838568 | 2.661493e-57 | -8.615850e-47 |
| Msa0099220 | Msa0279700 | 0.829388 | 5.293158e-55 | -8.615850e-47 |
| Msa0099220 | Msa0295540 | 0.806676 | 7.326294e-50 | -8.615850e-47 |
| Msa0099220 | Msa0298990 | 0.825499 | 4.534046e-54 | -8.615850e-47 |
| Msa0099220 | Msa0299870 | 0.826136 | 3.200454e-54 | -8.615850e-47 |
| Msa0099220 | Msa0306710 | 0.804001 | 2.663820e-49 | -8.615850e-47 |
| Msa0099220 | Msa0309750 | 0.824960 | 6.079565e-54 | -8.615850e-47 |
| Msa0099220 | Msa0309770 | 0.815302 | 9.912825e-52 | -8.615850e-47 |
| Msa0099220 | Msa0318980 | 0.839859 | 1.231643e-57 | -8.615850e-47 |
| Msa0099220 | Msa0333730 | 0.807065 | 6.062551e-50 | -8.615850e-47 |
| Msa0099220 | Msa0337240 | 0.815370 | 9.573234e-52 | -8.615850e-47 |
| Msa0099220 | Msa0337620 | 0.811129 | 8.170361e-51 | -8.615850e-47 |
| Msa0099220 | Msa0358170 | 0.803443 | 3.477520e-49 | -8.615850e-47 |
| Msa0099220 | Msa0372340 | 0.800917 | 1.150995e-48 | -8.615850e-47 |
| Msa0099220 | Msa0385580 | 0.801970 | 7.002619e-49 | -8.615850e-47 |
| Msa0099220 | Msa0391320 | 0.820473 | 6.731746e-53 | -8.615850e-47 |
| Msa0099220 | Msa0402650 | 0.851919 | 6.483888e-61 | -8.615850e-47 |
| Msa0099220 | Msa0447220 | 0.804784 | 1.829544e-49 | -8.615850e-47 |
| Msa0099220 | Msa0449210 | 0.842149 | 3.084527e-58 | -8.615850e-47 |
| Msa0099220 | Msa0481530 | 0.801746 | 7.783517e-49 | -8.615850e-47 |
| Msa0099220 | Msa0497490 | 0.825872 | 3.699477e-54 | -8.615850e-47 |
| Msa0099220 | Msa0510350 | 0.841221 | 5.420746e-58 | -8.615850e-47 |
| Msa0099220 | Msa0511310 | 0.820388 | 7.041881e-53 | -8.615850e-47 |
| Msa0099220 | Msa0526540 | 0.817182 | 3.764967e-52 | -8.615850e-47 |
| Msa0099220 | Msa0529890 | 0.818414 | 1.984801e-52 | -8.615850e-47 |
| Msa0099220 | Msa0542090 | 0.837898 | 3.960988e-57 | -8.615850e-47 |
| Msa0099220 | Msa0542130 | 0.840786 | 7.049297e-58 | -8.615850e-47 |
| Msa0099220 | Msa0542750 | 0.802302 | 5.984292e-49 | -8.615850e-47 |
| Msa0099220 | Msa0571920 | 0.802981 | 4.334533e-49 | -8.615850e-47 |
| Msa0099220 | Msa0576940 | 0.819925 | 8.987953e-53 | -8.615850e-47 |
| Msa0099220 | Msa0581280 | 0.803539 | 3.321956e-49 | -8.615850e-47 |
| Msa0099220 | Msa0585560 | 0.809166 | 2.163672e-50 | -8.615850e-47 |
| Msa0099220 | Msa0598810 | 0.801193 | 1.010732e-48 | -8.615850e-47 |
| Msa0099220 | Msa0598860 | 0.810569 | 1.079804e-50 | -8.615850e-47 |
| Msa0099220 | Msa0601150 | 0.807108 | 5.936488e-50 | -8.615850e-47 |
| Msa0099220 | Msa0602690 | 0.808404 | 3.149579e-50 | -8.615850e-47 |
| Msa0099220 | Msa0605000 | 0.821086 | 4.868566e-53 | -8.615850e-47 |
| Msa0099220 | Msa0615440 | 0.831122 | 1.996770e-55 | -8.615850e-47 |
| Msa0099220 | Msa0616240 | 0.835447 | 1.669375e-56 | -8.615850e-47 |
| Msa0099220 | Msa0621490 | 0.808989 | 2.361710e-50 | -8.615850e-47 |
| Msa0099220 | Msa0625720 | 0.820368 | 7.118915e-53 | -8.615850e-47 |
| Msa0099220 | Msa0643560 | 0.822182 | 2.715899e-53 | -8.615850e-47 |
| Msa0099220 | Msa0643570 | 0.832344 | 9.972238e-56 | -8.615850e-47 |
| Msa0099220 | Msa0663390 | 0.805154 | 1.531184e-49 | -8.615850e-47 |
| Msa0099220 | Msa0677290 | 0.811762 | 5.951613e-51 | -8.615850e-47 |
| Msa0099220 | Msa0685140 | 0.836766 | 7.720417e-57 | -8.615850e-47 |
| Msa0099220 | Msa0689260 | 0.834779 | 2.460699e-56 | -8.615850e-47 |
| Msa0099220 | Msa0692830 | 0.826957 | 2.039390e-54 | -8.615850e-47 |
| Msa0099220 | Msa0692950 | 0.814468 | 1.517135e-51 | -8.615850e-47 |
| Msa0099220 | Msa0698490 | 0.833013 | 6.803339e-56 | -8.615850e-47 |
| Msa0099220 | Msa0698660 | 0.834570 | 2.776571e-56 | -8.615850e-47 |
| Msa0099220 | Msa0698800 | 0.800971 | 1.121848e-48 | -8.615850e-47 |
| Msa0099220 | Msa0698870 | 0.813801 | 2.129733e-51 | -8.615850e-47 |
| Msa0099220 | Msa0699570 | 0.840855 | 6.760534e-58 | -8.615850e-47 |
| Msa0099220 | Msa0708520 | 0.804103 | 2.536525e-49 | -8.615850e-47 |
| Msa0099220 | Msa0711780 | 0.852034 | 6.015754e-61 | -8.615850e-47 |
| Msa0099220 | Msa0715650 | 0.814025 | 1.900642e-51 | -8.615850e-47 |
| Msa0099220 | Msa0715700 | 0.823304 | 1.488929e-53 | -8.615850e-47 |
| Msa0099220 | Msa0719420 | 0.834731 | 2.529490e-56 | -8.615850e-47 |
| Msa0099220 | Msa0734740 | 0.810948 | 8.941164e-51 | -8.615850e-47 |
| Msa0099220 | Msa0737560 | 0.820389 | 7.037912e-53 | -8.615850e-47 |
| Msa0099220 | Msa0740800 | 0.802329 | 5.906619e-49 | -8.615850e-47 |
| Msa0099220 | Msa0753140 | 0.813345 | 2.683092e-51 | -8.615850e-47 |
| Msa0099220 | Msa0772480 | 0.818613 | 1.788921e-52 | -8.615850e-47 |
| Msa0099220 | Msa0782950 | 0.816075 | 6.666950e-52 | -8.615850e-47 |
| Msa0099220 | Msa0789680 | 0.839222 | 1.803391e-57 | -8.615850e-47 |
| Msa0099220 | Msa0793800 | 0.813298 | 2.747715e-51 | -8.615850e-47 |
| Msa0099220 | Msa0794670 | 0.846444 | 2.163526e-59 | -8.615850e-47 |
| Msa0099220 | Msa0798440 | 0.821489 | 3.928717e-53 | -8.615850e-47 |
| Msa0099220 | Msa0802410 | 0.842868 | 1.988080e-58 | -8.615850e-47 |
| Msa0099220 | Msa0813740 | 0.833311 | 5.735988e-56 | -8.615850e-47 |
| Msa0099220 | Msa0816700 | 0.816220 | 6.187863e-52 | -8.615850e-47 |
| Msa0099220 | Msa0825590 | 0.824772 | 6.733537e-54 | -8.615850e-47 |
| Msa0099220 | Msa0830540 | 0.840816 | 6.921822e-58 | -8.615850e-47 |
| Msa0099220 | Msa0831530 | 0.813297 | 2.749374e-51 | -8.615850e-47 |
| Msa0099220 | Msa0856910 | 0.831350 | 1.755040e-55 | -8.615850e-47 |
| Msa0099220 | Msa0878500 | 0.814792 | 1.286165e-51 | -8.615850e-47 |
| Msa0099220 | Msa0920610 | 0.812171 | 4.848637e-51 | -8.615850e-47 |
| Msa0099220 | Msa0926850 | 0.805790 | 1.125903e-49 | -8.615850e-47 |
| Msa0099220 | Msa0944190 | 0.815980 | 7.000520e-52 | -8.615850e-47 |
| Msa0099220 | Msa0945440 | 0.834569 | 2.778595e-56 | -8.615850e-47 |
| Msa0099220 | Msa0989540 | 0.827400 | 1.597797e-54 | -8.615850e-47 |
| Msa0099220 | Msa0999970 | 0.817339 | 3.470458e-52 | -8.615850e-47 |
| Msa0099220 | Msa1009820 | 0.843533 | 1.321338e-58 | -8.615850e-47 |
| Msa0099220 | Msa1011680 | 0.818916 | 1.526538e-52 | -8.615850e-47 |
| Msa0099220 | Msa1019640 | 0.806368 | 8.511872e-50 | -8.615850e-47 |
| Msa0099220 | Msa1051200 | 0.839097 | 1.942013e-57 | -8.615850e-47 |
| Msa0099220 | Msa1077030 | 0.804483 | 2.113901e-49 | -8.615850e-47 |
| Msa0099220 | Msa1081150 | 0.811369 | 7.246059e-51 | -8.615850e-47 |
| Msa0099220 | Msa1084470 | 0.832549 | 8.873125e-56 | -8.615850e-47 |
| Msa0099220 | Msa1088640 | 0.817946 | 2.533229e-52 | -8.615850e-47 |
| Msa0099220 | Msa1104140 | 0.829338 | 5.443455e-55 | -8.615850e-47 |
| Msa0099220 | Msa1104210 | 0.806673 | 7.339767e-50 | -8.615850e-47 |
| Msa0099220 | Msa1104370 | 0.806263 | 8.953054e-50 | -8.615850e-47 |
| Msa0099220 | Msa1106700 | 0.830322 | 3.135271e-55 | -8.615850e-47 |
| Msa0099220 | Msa1137700 | 0.848795 | 4.879461e-60 | -8.615850e-47 |
| Msa0099220 | Msa1138870 | 0.805411 | 1.352212e-49 | -8.615850e-47 |
| Msa0099220 | Msa1175440 | 0.819647 | 1.040558e-52 | -8.615850e-47 |
| Msa0099220 | Msa1181250 | 0.802136 | 6.473206e-49 | -8.615850e-47 |
| Msa0099220 | Msa1206670 | 0.801585 | 8.399422e-49 | -8.615850e-47 |
| Msa0099220 | Msa1206850 | 0.807562 | 4.757926e-50 | -8.615850e-47 |
| Msa0099220 | Msa1208880 | 0.815891 | 7.326785e-52 | -8.615850e-47 |
| Msa0099220 | Msa1209200 | 0.814779 | 1.294706e-51 | -8.615850e-47 |
| Msa0099220 | Msa1209260 | 0.804636 | 1.964572e-49 | -8.615850e-47 |
| Msa0099220 | Msa1218730 | 0.813772 | 2.160618e-51 | -8.615850e-47 |
| Msa0099220 | Msa1224810 | 0.820879 | 5.431929e-53 | -8.615850e-47 |
| Msa0099220 | Msa1233030 | 0.801489 | 8.790519e-49 | -8.615850e-47 |
| Msa0099220 | Msa1245930 | 0.805321 | 1.412368e-49 | -8.615850e-47 |
| Msa0099220 | Msa1259060 | 0.815181 | 1.054550e-51 | -8.615850e-47 |
| Msa0099220 | Msa1265630 | 0.819916 | 9.031473e-53 | -8.615850e-47 |
| Msa0099220 | Msa1265890 | 0.802686 | 4.985745e-49 | -8.615850e-47 |
| Msa0099220 | Msa1287460 | 0.808098 | 3.659513e-50 | -8.615850e-47 |
| Msa0099220 | Msa1302850 | 0.800782 | 1.226067e-48 | -8.615850e-47 |
| Msa0099220 | Msa1331710 | 0.809599 | 1.747130e-50 | -8.615850e-47 |
| Msa0099220 | Msa1333010 | 0.809768 | 1.607235e-50 | -8.615850e-47 |
| Msa0099220 | Msa1344340 | 0.835573 | 1.551317e-56 | -8.615850e-47 |
| Msa0099220 | Msa1353330 | 0.804749 | 1.860577e-49 | -8.615850e-47 |
| Msa0099220 | Msa1358250 | 0.838676 | 2.496591e-57 | -8.615850e-47 |
| Msa0099220 | Msa1363330 | 0.817579 | 3.065043e-52 | -8.615850e-47 |
| Msa0099220 | Msa1374120 | 0.824219 | 9.086150e-54 | -8.615850e-47 |
| Msa0099220 | Msa1382560 | 0.808655 | 2.783910e-50 | -8.615850e-47 |
| Msa0099220 | Msa1385100 | 0.905428 | 4.337485e-80 | -8.615850e-47 |
| Msa0099220 | Msa1386600 | 0.817814 | 2.712102e-52 | -8.615850e-47 |
| Msa0099220 | Msa1386780 | 0.804641 | 1.959590e-49 | -8.615850e-47 |
| Msa0099220 | Msa1389800 | 0.813291 | 2.756741e-51 | -8.615850e-47 |
| Msa0099220 | Msa1392780 | 0.821431 | 4.051625e-53 | -8.615850e-47 |
| Msa0099220 | Msa1394290 | 0.844383 | 7.821085e-59 | -8.615850e-47 |
| Msa0099220 | Msa1400580 | 0.811868 | 5.644114e-51 | -8.615850e-47 |
| Msa0099220 | Msa1423350 | 0.800442 | 1.438574e-48 | -8.615850e-47 |
| Msa0099220 | Msa1445660 | 0.814723 | 1.332294e-51 | -8.615850e-47 |
| Msa0099220 | Msa1446950 | 0.816696 | 4.841976e-52 | -8.615850e-47 |
| Msa0099220 | Msa1448690 | 0.826626 | 2.446227e-54 | -8.615850e-47 |
| Msa0099220 | Msa1454480 | 0.811371 | 7.239893e-51 | -8.615850e-47 |
| Msa0099220 | Msa1457920 | 0.833906 | 4.075395e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0099220 | MtrunA17_Chr1g0151151 | 95.455 | 308 | 13 | 1 | 1 | 307 | 256 | 563 | 0.0 | 582 |
| Msa0099220 | MtrunA17_Chr3g0093921 | 32.759 | 116 | 71 | 3 | 97 | 207 | 65 | 178 | 1.48e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0099220 | AT2G26200.1 | 55.591 | 313 | 133 | 3 | 1 | 307 | 253 | 565 | 3.65e-110 | 331 |
| Msa0099220 | AT2G26810.2 | 31.214 | 173 | 108 | 5 | 97 | 264 | 59 | 225 | 8.59e-18 | 81.6 |
| Msa0099220 | AT2G26810.1 | 31.214 | 173 | 108 | 5 | 97 | 264 | 59 | 225 | 8.59e-18 | 81.6 |
| Msa0099220 | AT2G26810.3 | 38.261 | 115 | 65 | 3 | 97 | 207 | 59 | 171 | 1.60e-15 | 74.3 |
| Msa0099220 | AT2G26810.7 | 38.261 | 115 | 65 | 3 | 97 | 207 | 59 | 171 | 1.60e-15 | 74.3 |
| Msa0099220 | AT2G26810.4 | 38.261 | 115 | 65 | 3 | 97 | 207 | 59 | 171 | 1.60e-15 | 74.3 |
| Msa0099220 | AT2G26810.6 | 38.261 | 115 | 65 | 3 | 97 | 207 | 67 | 179 | 1.63e-15 | 74.7 |
| Msa0099220 | AT2G26810.5 | 38.261 | 115 | 65 | 3 | 97 | 207 | 67 | 179 | 1.63e-15 | 74.7 |
Find 133 sgRNAs with CRISPR-Local
Find 489 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATATTGTTTCCGGAAAA+AGG | 0.103649 | 1_3:-5312860 | Msa0099220:CDS |
| GCAGATGCATGAAGACTTTA+AGG | 0.160121 | 1_3:-5316621 | Msa0099220:intron |
| TGTTATTGACAATTGGTTTA+TGG | 0.179744 | 1_3:-5312370 | Msa0099220:CDS |
| AGGAGGAAAGAAAGTAATTT+TGG | 0.191683 | 1_3:-5317860 | Msa0099220:five_prime_UTR |
| CTTTCAGCTGCATCACAATT+TGG | 0.194547 | 1_3:-5312447 | Msa0099220:CDS |
| ATTTATTCCAAACCAAATTC+TGG | 0.197214 | 1_3:-5319761 | Msa0099220:five_prime_UTR |
| ATTGATTTGCTTCTCACTTT+GGG | 0.212102 | 1_3:-5312089 | Msa0099220:three_prime_UTR |
| ACAAATTTATTCAAAGAAAA+TGG | 0.213631 | 1_3:-5313989 | Msa0099220:five_prime_UTR |
| ACAAAGACCACTTCAGTTTC+AGG | 0.224017 | 1_3:+5319893 | None:intergenic |
| AACTTCAAAATGAGCTTAAA+TGG | 0.227473 | 1_3:+5312161 | None:intergenic |
| GAAAATCCCAATATTGTTTC+CGG | 0.249931 | 1_3:-5312867 | Msa0099220:CDS |
| AGACGTTTCAGGCGAATTTC+CGG | 0.250447 | 1_3:+5312398 | None:intergenic |
| ATCATCAGCTTGAAATTAAA+AGG | 0.259253 | 1_3:-5312039 | Msa0099220:three_prime_UTR |
| CAGCTTGTATTAATTAATTC+AGG | 0.264476 | 1_3:+5312262 | None:intergenic |
| AAGGGTGAGACCCCAGAATT+TGG | 0.265459 | 1_3:+5319749 | None:intergenic |
| ATAACACTTCGAGACGTTTC+AGG | 0.273056 | 1_3:+5312387 | None:intergenic |
| AAAGAGAAGCTAAGAAATAT+TGG | 0.275974 | 1_3:-5319615 | Msa0099220:five_prime_UTR |
| ATTCGCCTCAGCTTCTTTAC+TGG | 0.282944 | 1_3:+5313746 | None:intergenic |
| AATATGTTTAATGCACTATT+AGG | 0.285579 | 1_3:+5312324 | None:intergenic |
| CATTGATTTGCTTCTCACTT+TGG | 0.286037 | 1_3:-5312090 | Msa0099220:three_prime_UTR |
| CTGATATTCTCTTTATATAT+AGG | 0.296593 | 1_3:+5314813 | None:intergenic |
| TTTCAGCTGCATCACAATTT+GGG | 0.310864 | 1_3:-5312446 | Msa0099220:CDS |
| ATTCTGGGGTCTCACCCTTT+TGG | 0.312133 | 1_3:-5319745 | Msa0099220:five_prime_UTR |
| TGATGCTATCACAGGAAATA+TGG | 0.318795 | 1_3:+5317336 | None:intergenic |
| ATAAAGGAGATGAGTGATAG+AGG | 0.329154 | 1_3:-5312636 | Msa0099220:CDS |
| CATCAAACCAGTTGATTTGC+AGG | 0.330099 | 1_3:+5312929 | None:intergenic |
| TTAATATTCTGCAAAACAAT+AGG | 0.332969 | 1_3:+5316303 | None:intergenic |
| GTGGGAATCGGCCCGATTAA+TGG | 0.336825 | 1_3:-5312904 | Msa0099220:CDS |
| CTTGATGGTGATAACAATAT+TGG | 0.341012 | 1_3:-5313720 | Msa0099220:CDS |
| CATCGACACGGCGAAAGATA+TGG | 0.341313 | 1_3:+5312481 | None:intergenic |
| TGGGCCTGTTTCTTCATTTG+AGG | 0.345651 | 1_3:-5315011 | Msa0099220:five_prime_UTR |
| GGGCCTGTTTCTTCATTTGA+GGG | 0.353775 | 1_3:-5315010 | Msa0099220:five_prime_UTR |
| GATCTCACGGCAATGGCATC+AGG | 0.356294 | 1_3:-5319821 | Msa0099220:five_prime_UTR |
| GAAAACTAACCTTGTCTTTG+TGG | 0.362479 | 1_3:+5319575 | None:intergenic |
| TTTATATAGGAGAGATTCTC+TGG | 0.370599 | 1_3:-5314179 | Msa0099220:intron |
| CTCGAAGTGTTATTGACAAT+TGG | 0.375056 | 1_3:-5312377 | Msa0099220:CDS |
| CCACGAAAACCAGCCATTGT+TGG | 0.385359 | 1_3:+5314916 | None:intergenic |
| CAAGGACGGAAGCCATTAAT+CGG | 0.393239 | 1_3:+5312892 | None:intergenic |
| TTGACATGTCTGAGGGAGTC+GGG | 0.399247 | 1_3:-5313650 | Msa0099220:CDS |
| TTTATTCCAAACCAAATTCT+GGG | 0.404687 | 1_3:-5319760 | Msa0099220:five_prime_UTR |
| CTCACCACGAGCTATTGAAT+TGG | 0.405150 | 1_3:-5317281 | Msa0099220:five_prime_UTR |
| GGAGTCGGGGCTGACATGTT+TGG | 0.408447 | 1_3:-5313636 | Msa0099220:CDS |
| TTCTCAAAACCAACAATGGC+TGG | 0.409462 | 1_3:-5314925 | Msa0099220:five_prime_UTR |
| TTTCAAAGACCGGCATTACT+TGG | 0.412980 | 1_3:-5318009 | Msa0099220:five_prime_UTR |
| CTATATATAAAGAGAATATC+AGG | 0.416604 | 1_3:-5314812 | Msa0099220:intron |
| AGCCCCTCAAATGAAGAAAC+AGG | 0.420433 | 1_3:+5315007 | None:intergenic |
| ACGAGCTATTGAATTGGTTA+AGG | 0.421963 | 1_3:-5317275 | Msa0099220:intron |
| TGAGACCCCAGAATTTGGTT+TGG | 0.422537 | 1_3:+5319754 | None:intergenic |
| CGCAGCAGCACATATCCATT+TGG | 0.435282 | 1_3:+5316168 | None:intergenic |
| CATGCATAAACAAAAGCATC+TGG | 0.435659 | 1_3:+5317310 | None:intergenic |
| AAGAGAAGCTAAGAAATATT+GGG | 0.435875 | 1_3:-5319614 | Msa0099220:five_prime_UTR |
| CAACATACCTGCAAATCAAC+TGG | 0.438434 | 1_3:-5312936 | Msa0099220:CDS |
| TTGGAGTTAGGGTGTGGCAG+TGG | 0.441103 | 1_3:-5312834 | Msa0099220:CDS |
| TTTCTCCATTTGCAGCCAAA+TGG | 0.443656 | 1_3:-5316183 | Msa0099220:intron |
| TGGTTTGATGCTGTGGGAAT+CGG | 0.444115 | 1_3:-5312916 | Msa0099220:CDS |
| GTTTGCTGGTTTCAGGCGTT+GGG | 0.449293 | 1_3:-5313808 | Msa0099220:intron |
| GCATTACTTGGATAAAGAAT+GGG | 0.455655 | 1_3:-5317997 | Msa0099220:five_prime_UTR |
| GGCATTACTTGGATAAAGAA+TGG | 0.457337 | 1_3:-5317998 | Msa0099220:five_prime_UTR |
| ATTATGGAGATCAACCTTAG+AGG | 0.457883 | 1_3:-5312996 | Msa0099220:CDS |
| CAAAGTGAGAAGCAAATCAA+TGG | 0.462588 | 1_3:+5312091 | None:intergenic |
| CAAAGACCACTTCAGTTTCA+GGG | 0.463569 | 1_3:+5319894 | None:intergenic |
| AGCTTCTTTACTGGAAGAGT+TGG | 0.466430 | 1_3:+5313755 | None:intergenic |
| AGGGTAGGTACCTCTCCAAA+AGG | 0.473644 | 1_3:+5319730 | None:intergenic |
| TTGATTTGCTTCTCACTTTG+GGG | 0.473646 | 1_3:-5312088 | Msa0099220:three_prime_UTR |
| GCTGAGGCGAATCATCTTGA+TGG | 0.475133 | 1_3:-5313735 | Msa0099220:CDS |
| TTTACTGAACAGGTTGGGTG+TGG | 0.479098 | 1_3:-5317370 | Msa0099220:intron |
| CTGCTGCGAGACTATGCTAC+TGG | 0.479610 | 1_3:-5316153 | Msa0099220:five_prime_UTR |
| CTTGCCTTCCGACGAGTATG+AGG | 0.495769 | 1_3:-5313610 | Msa0099220:intron |
| TTCTGTTGATATTGTTACAA+TGG | 0.496744 | 1_3:-5316531 | Msa0099220:intron |
| AGATCACATAGAAAGCATAA+AGG | 0.499104 | 1_3:-5312652 | Msa0099220:CDS |
| GCTGGTTCAGGACCAGATGC+TGG | 0.500985 | 1_3:-5314894 | Msa0099220:five_prime_UTR |
| CACGTTAATGCTTGATCTCA+CGG | 0.501128 | 1_3:-5319834 | Msa0099220:five_prime_UTR |
| GAGCCACGAAAACCAGCATC+TGG | 0.504296 | 1_3:+5314882 | None:intergenic |
| GAGTTAGGGTGTGGCAGTGG+TGG | 0.504655 | 1_3:-5312831 | Msa0099220:CDS |
| TGGAGATCAACCTTAGAGGC+TGG | 0.507549 | 1_3:-5312992 | Msa0099220:CDS |
| GAACAGGTTGGGTGTGGAGC+TGG | 0.509594 | 1_3:-5317364 | Msa0099220:intron |
| CAGCGACAAAAGCGTGAACA+TGG | 0.510092 | 1_3:+5316594 | None:intergenic |
| GGCCTGTTTCTTCATTTGAG+GGG | 0.521577 | 1_3:-5315009 | Msa0099220:five_prime_UTR |
| TATGTTATCTGCAGTGTCCC+CGG | 0.526619 | 1_3:-5316334 | Msa0099220:five_prime_UTR |
| ATTTGCCACTTCAAACTCAA+AGG | 0.532302 | 1_3:-5319790 | Msa0099220:five_prime_UTR |
| CTGAAACACAAAATACAGCT+TGG | 0.541542 | 1_3:+5313784 | None:intergenic |
| AATCTCTTTGCACAAATCAT+CGG | 0.542409 | 1_3:+5316562 | None:intergenic |
| GAGAACGTTCTACATATGAA+TGG | 0.543550 | 1_3:+5312062 | None:intergenic |
| TGCAACCTTTGAGTTTGAAG+TGG | 0.544850 | 1_3:+5319785 | None:intergenic |
| AAGAAGTTGAGAACCGCTCA+AGG | 0.548248 | 1_3:-5313934 | Msa0099220:five_prime_UTR |
| AATCAACTGGTTTGATGCTG+TGG | 0.549620 | 1_3:-5312923 | Msa0099220:CDS |
| AGGGTATTGGAGTTAGGGTG+TGG | 0.549969 | 1_3:-5312840 | Msa0099220:CDS |
| CAAGATCCGCTCAACTGTGT+TGG | 0.550587 | 1_3:-5314969 | Msa0099220:five_prime_UTR |
| GTAACAATATCAACAGAAGA+TGG | 0.550718 | 1_3:+5316536 | None:intergenic |
| CAGTTGATTTGCAGGTATGT+TGG | 0.552753 | 1_3:+5312937 | None:intergenic |
| GTAGCTAGTTTAGTCAGCAA+TGG | 0.555650 | 1_3:+5312699 | None:intergenic |
| AAAGTGAGAAGCAAATCAAT+GGG | 0.556946 | 1_3:+5312092 | None:intergenic |
| AAACATATTGCTCTTCTGCA+TGG | 0.557086 | 1_3:-5312310 | Msa0099220:CDS |
| ATTCTTTATCCAAGTAATGC+CGG | 0.560199 | 1_3:+5318000 | None:intergenic |
| ATCTGTAGCAACTACTCGAT+CGG | 0.561693 | 1_3:+5312779 | None:intergenic |
| TGCTACTGGAGACCTTGCTC+AGG | 0.567273 | 1_3:-5316139 | Msa0099220:intron |
| TTAGTAGACAAGTGGCCTAC+CGG | 0.568314 | 1_3:-5312417 | Msa0099220:CDS |
| CAAGGGAGTTGATAATGAAA+CGG | 0.570171 | 1_3:-5313916 | Msa0099220:intron |
| AATGCTTGATCTCACGGCAA+TGG | 0.571311 | 1_3:-5319828 | Msa0099220:five_prime_UTR |
| TCTGGATATGATGCTATCAC+AGG | 0.575758 | 1_3:+5317328 | None:intergenic |
| ATTGACATGTCTGAGGGAGT+CGG | 0.576361 | 1_3:-5313651 | Msa0099220:CDS |
| AAGGACGGAAGCCATTAATC+GGG | 0.578586 | 1_3:+5312893 | None:intergenic |
| TAAAGGAGATGAGTGATAGA+GGG | 0.579905 | 1_3:-5312635 | Msa0099220:CDS |
| GGGTAGGTACCTCTCCAAAA+GGG | 0.580724 | 1_3:+5319731 | None:intergenic |
| ATCTCACGGCAATGGCATCA+GGG | 0.581718 | 1_3:-5319820 | Msa0099220:five_prime_UTR |
| CTCTTCCAGTAAAGAAGCTG+AGG | 0.582410 | 1_3:-5313751 | Msa0099220:CDS |
| TCATTATCAACTCCCTTGAG+CGG | 0.584655 | 1_3:+5313921 | None:intergenic |
| TTGAGCGGATCTTGAAGAAG+AGG | 0.593240 | 1_3:+5314978 | None:intergenic |
| GGTTTATATTAGTAGACAAG+TGG | 0.593320 | 1_3:-5312425 | Msa0099220:CDS |
| AGAGGGTTCAATGTCATCAT+CGG | 0.597470 | 1_3:-5312618 | Msa0099220:CDS |
| GATCGAGTAGTTGCTACAGA+TGG | 0.598212 | 1_3:-5312777 | Msa0099220:CDS |
| ATATGGCAAAGAATAAGTAC+AGG | 0.601647 | 1_3:+5312498 | None:intergenic |
| CTCTGTAATTGACATGTCTG+AGG | 0.603915 | 1_3:-5313658 | Msa0099220:CDS |
| ATCAACTGGTTTGATGCTGT+GGG | 0.608480 | 1_3:-5312922 | Msa0099220:CDS |
| TTATTCCAAACCAAATTCTG+GGG | 0.617390 | 1_3:-5319759 | Msa0099220:five_prime_UTR |
| GATAAACCCTGAAACTGAAG+TGG | 0.621986 | 1_3:-5319900 | Msa0099220:five_prime_UTR |
| TGACATGTCTGAGGGAGTCG+GGG | 0.622122 | 1_3:-5313649 | Msa0099220:CDS |
| ATAGGAGAGATTCTCTGGCA+AGG | 0.623934 | 1_3:-5314174 | Msa0099220:intron |
| AGGTATAGAAGATAAAGCTA+CGG | 0.629025 | 1_3:+5314833 | None:intergenic |
| CAACAAAATCAACCTGAGCA+AGG | 0.630816 | 1_3:+5316127 | None:intergenic |
| TCTCACGGCAATGGCATCAG+GGG | 0.631546 | 1_3:-5319819 | Msa0099220:five_prime_UTR |
| CTACAAACACCACAAAGACA+AGG | 0.634893 | 1_3:-5319584 | Msa0099220:intron |
| CTTACCTCATACTCGTCGGA+AGG | 0.644138 | 1_3:+5313606 | None:intergenic |
| AGAAGTTGAGAACCGCTCAA+GGG | 0.645207 | 1_3:-5313933 | Msa0099220:five_prime_UTR |
| GTTTCAGGCGAATTTCCGGT+AGG | 0.649486 | 1_3:+5312402 | None:intergenic |
| TGGTGATAACAATATTGGCA+CGG | 0.662682 | 1_3:-5313715 | Msa0099220:CDS |
| AAGCCTTACCTCATACTCGT+CGG | 0.662998 | 1_3:+5313602 | None:intergenic |
| AGCGACAAAAGCGTGAACAT+GGG | 0.663872 | 1_3:+5316595 | None:intergenic |
| GCAACGTTGGTTCATCGACA+CGG | 0.677877 | 1_3:+5312469 | None:intergenic |
| CATTACTTGGATAAAGAATG+GGG | 0.679169 | 1_3:-5317996 | Msa0099220:five_prime_UTR |
| TCTGTAATTGACATGTCTGA+GGG | 0.683888 | 1_3:-5313657 | Msa0099220:CDS |
| GATGCAGCTGAAAGCAACGT+TGG | 0.684511 | 1_3:+5312456 | None:intergenic |
| TTAACCAATTCAATAGCTCG+TGG | 0.686527 | 1_3:+5317277 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTATTTTTTTATGTTTTT+TGG | - | chr1_3:5312289-5312308 | Msa0099220:exon | 10.0% |
| !! | ACATAAATACTTAAAAAATA+TGG | + | chr1_3:5313848-5313867 | None:intergenic | 10.0% |
| !! | AAAACAATAAGAATTATATT+TGG | + | chr1_3:5315936-5315955 | None:intergenic | 10.0% |
| !!! | ATCATCTTAAAATTTAAGTT+TGG | + | chr1_3:5312535-5312554 | None:intergenic | 15.0% |
| !!! | TTCATTTATTTTTCTATTAC+TGG | - | chr1_3:5312834-5312853 | Msa0099220:CDS | 15.0% |
| !!! | TTTAATGGATTTTTTTTTGT+TGG | - | chr1_3:5313746-5313765 | Msa0099220:CDS | 15.0% |
| !!! | TTAAGTAATCTTTTATTTCA+GGG | - | chr1_3:5314059-5314078 | Msa0099220:intron | 15.0% |
| !! | CTTATAAGTTTATCATATAA+AGG | - | chr1_3:5314154-5314173 | Msa0099220:five_prime_UTR | 15.0% |
| !! | TGTTATAGAACATAATTATA+TGG | - | chr1_3:5314368-5314387 | Msa0099220:intron | 15.0% |
| !!! | TTTCTGGTTAAAAAATAAAA+GGG | + | chr1_3:5315842-5315861 | None:intergenic | 15.0% |
| !!! | TTTTCTGGTTAAAAAATAAA+AGG | + | chr1_3:5315843-5315862 | None:intergenic | 15.0% |
| !! | AAAAAACCAAAATATTGTAT+AGG | + | chr1_3:5316580-5316599 | None:intergenic | 15.0% |
| !!! | TTTGATTCAAATTTGAAATT+AGG | + | chr1_3:5317243-5317262 | None:intergenic | 15.0% |
| !!! | GAGTTTAGATATTATTTTTT+AGG | + | chr1_3:5317328-5317347 | None:intergenic | 15.0% |
| !! | TTTCAATTCAAATTTGAATT+AGG | + | chr1_3:5317353-5317372 | None:intergenic | 15.0% |
| !! | ACAAATTTATTCAAAGAAAA+TGG | - | chr1_3:5317953-5317972 | Msa0099220:intron | 15.0% |
| !! | CAACATTAATAAAAATACAA+GGG | + | chr1_3:5319818-5319837 | None:intergenic | 15.0% |
| !! | ACAACATTAATAAAAATACA+AGG | + | chr1_3:5319819-5319838 | None:intergenic | 15.0% |
| !!! | TTAAATTTTAAGATGATCAG+AGG | - | chr1_3:5312538-5312557 | Msa0099220:CDS | 20.0% |
| !! | TGTAATGTAGTACTATATAT+CGG | - | chr1_3:5312681-5312700 | Msa0099220:CDS | 20.0% |
| !! | ATATTTCTTGTGATGAATTA+GGG | + | chr1_3:5312722-5312741 | None:intergenic | 20.0% |
| !! | TATATTTCTTGTGATGAATT+AGG | + | chr1_3:5312723-5312742 | None:intergenic | 20.0% |
| !!! | CTCTATTTAAATTTTGCTTT+AGG | + | chr1_3:5312912-5312931 | None:intergenic | 20.0% |
| !! | ATAGAATTATTTACGATTGA+GGG | + | chr1_3:5312992-5313011 | None:intergenic | 20.0% |
| !! | TATAGAATTATTTACGATTG+AGG | + | chr1_3:5312993-5313012 | None:intergenic | 20.0% |
| !!! | GTTAAGTAATCTTTTATTTC+AGG | - | chr1_3:5314058-5314077 | Msa0099220:intron | 20.0% |
| !! | TTATAAGTTATAAACAGTAG+AGG | + | chr1_3:5314141-5314160 | None:intergenic | 20.0% |
| !!! | AAATAAGTTGAAAACAGATA+TGG | + | chr1_3:5314276-5314295 | None:intergenic | 20.0% |
| !!! | TTCTTATTTTAAGATATCTG+TGG | - | chr1_3:5314423-5314442 | Msa0099220:intron | 20.0% |
| !!! | TTTTGTTTATAGTTTCGATA+TGG | - | chr1_3:5315061-5315080 | Msa0099220:intron | 20.0% |
| !!! | CTCATTTATTTTTCGATAAA+AGG | - | chr1_3:5315182-5315201 | Msa0099220:intron | 20.0% |
| !!! | GTTTTTCTTTATTTTATGAC+AGG | + | chr1_3:5315244-5315263 | None:intergenic | 20.0% |
| !! | GTTGTTTATATACATCTAAT+TGG | - | chr1_3:5315276-5315295 | Msa0099220:intron | 20.0% |
| !! | TTAATATTCTGCAAAACAAT+AGG | + | chr1_3:5315642-5315661 | None:intergenic | 20.0% |
| !!! | AATGCATTTATTTTAGAGTT+TGG | - | chr1_3:5316281-5316300 | Msa0099220:intron | 20.0% |
| !! | AAAATAAGTTGTTCTTTACA+AGG | + | chr1_3:5316367-5316386 | None:intergenic | 20.0% |
| !! | CTGATATTCTCTTTATATAT+AGG | + | chr1_3:5317132-5317151 | None:intergenic | 20.0% |
| !! | CTATATATAAAGAGAATATC+AGG | - | chr1_3:5317130-5317149 | Msa0099220:intron | 20.0% |
| !! | AACATAAGAGTTTAAATGAA+GGG | + | chr1_3:5317176-5317195 | None:intergenic | 20.0% |
| !! | AAACATAAGAGTTTAAATGA+AGG | + | chr1_3:5317177-5317196 | None:intergenic | 20.0% |
| !!! | TATTTTTTAGGACTGATTTA+AGG | + | chr1_3:5317316-5317335 | None:intergenic | 20.0% |
| !!! | AAATTTTAAGCTTTAAGTTG+TGG | + | chr1_3:5317424-5317443 | None:intergenic | 20.0% |
| !!! | AATTTTAGCATTTCTTTTGT+TGG | - | chr1_3:5317664-5317683 | Msa0099220:intron | 20.0% |
| !!! | AGTATGATTTTTGTTTTGAT+GGG | + | chr1_3:5318588-5318607 | None:intergenic | 20.0% |
| !!! | TAGTATGATTTTTGTTTTGA+TGG | + | chr1_3:5318589-5318608 | None:intergenic | 20.0% |
| !! | TACTAAAGTTTCAAATCATA+AGG | + | chr1_3:5318710-5318729 | None:intergenic | 20.0% |
| !! | TAGTTTATGCACTATATATT+TGG | - | chr1_3:5318728-5318747 | Msa0099220:intron | 20.0% |
| !!! | AATATTAGATGCAACATTTT+TGG | + | chr1_3:5319217-5319236 | None:intergenic | 20.0% |
| !! | AATATGTTTAATGCACTATT+AGG | + | chr1_3:5319621-5319640 | None:intergenic | 20.0% |
| ! | ATTTATTCCAAACCAAATTC+TGG | - | chr1_3:5312181-5312200 | Msa0099220:three_prime_UTR | 25.0% |
| ! | TTTATTCCAAACCAAATTCT+GGG | - | chr1_3:5312182-5312201 | Msa0099220:three_prime_UTR | 25.0% |
| ! | AAAGAGAAGCTAAGAAATAT+TGG | - | chr1_3:5312327-5312346 | Msa0099220:CDS | 25.0% |
| ! | AAGAGAAGCTAAGAAATATT+GGG | - | chr1_3:5312328-5312347 | Msa0099220:CDS | 25.0% |
| ! | ACAAAACAAACTTAAGAGTA+AGG | + | chr1_3:5312392-5312411 | None:intergenic | 25.0% |
| !!! | TTAAGTTTGTTTTGTACTCA+TGG | - | chr1_3:5312397-5312416 | Msa0099220:CDS | 25.0% |
| ! | TTAGATTATCACTTATCAGA+AGG | - | chr1_3:5312425-5312444 | Msa0099220:CDS | 25.0% |
| ! | TCATATATAGACACAATAGA+AGG | - | chr1_3:5312616-5312635 | Msa0099220:CDS | 25.0% |
| ! | CATATATAGACACAATAGAA+GGG | - | chr1_3:5312617-5312636 | Msa0099220:CDS | 25.0% |
| ! | CATTATTTACCAATTGATAG+AGG | - | chr1_3:5313198-5313217 | Msa0099220:intron | 25.0% |
| !!! | ATTTTAAGACCTCTATCAAT+TGG | + | chr1_3:5313210-5313229 | None:intergenic | 25.0% |
| !!! | TTCAATGCTAGCTATTTTAT+TGG | + | chr1_3:5313386-5313405 | None:intergenic | 25.0% |
| ! | TTTCCAAAGACAAAAATATG+AGG | - | chr1_3:5313503-5313522 | Msa0099220:intron | 25.0% |
| !!! | ATGGATTTTTTTTTGTTGGT+TGG | - | chr1_3:5313750-5313769 | Msa0099220:CDS | 25.0% |
| !!! | TGGATTTTTTTTTGTTGGTT+GGG | - | chr1_3:5313751-5313770 | Msa0099220:CDS | 25.0% |
| ! | CTTCAACTTAATGTTATGTT+GGG | - | chr1_3:5313785-5313804 | Msa0099220:CDS | 25.0% |
| !! | ACTTCTTAAGAAAGCATAAT+TGG | + | chr1_3:5314548-5314567 | None:intergenic | 25.0% |
| !! | TTTCTCTATACCTTTTACAT+TGG | - | chr1_3:5315017-5315036 | Msa0099220:five_prime_UTR | 25.0% |
| ! | TTCTGTTGATATTGTTACAA+TGG | - | chr1_3:5315411-5315430 | Msa0099220:intron | 25.0% |
| ! | TTTCAATAATAATAGCACAG+AGG | + | chr1_3:5315540-5315559 | None:intergenic | 25.0% |
| ! | CATGAATAAGTTATCTAACA+AGG | + | chr1_3:5315720-5315739 | None:intergenic | 25.0% |
| ! | GAATTATATTTGGATTCTTC+CGG | + | chr1_3:5315926-5315945 | None:intergenic | 25.0% |
| ! | AAATTAATATCTGTTTGACG+AGG | - | chr1_3:5316008-5316027 | Msa0099220:intron | 25.0% |
| ! | CTTTATGGCAAAAGATAAAA+TGG | + | chr1_3:5316076-5316095 | None:intergenic | 25.0% |
| !! | ATGAAGAAAGTTTTCGAAAA+AGG | - | chr1_3:5316389-5316408 | Msa0099220:intron | 25.0% |
| ! | AATATTGTATAGGATGAAGA+TGG | + | chr1_3:5316570-5316589 | None:intergenic | 25.0% |
| !! | CTTCATCCTATACAATATTT+TGG | - | chr1_3:5316571-5316590 | Msa0099220:five_prime_UTR | 25.0% |
| ! | TAGAGAGAAATGAAGAATTT+GGG | + | chr1_3:5316876-5316895 | None:intergenic | 25.0% |
| ! | TTAGAGAGAAATGAAGAATT+TGG | + | chr1_3:5316877-5316896 | None:intergenic | 25.0% |
| ! | GTTTAAATGAAGGGTAAAAT+TGG | + | chr1_3:5317167-5317186 | None:intergenic | 25.0% |
| ! | GCAGGAAGTAAAAAATATTA+TGG | + | chr1_3:5317554-5317573 | None:intergenic | 25.0% |
| ! | ATTCATCAACCAATATTTGA+CGG | + | chr1_3:5317707-5317726 | None:intergenic | 25.0% |
| !! | TGTAGAACTTCTAAAAGAAT+AGG | + | chr1_3:5318430-5318449 | None:intergenic | 25.0% |
| !!! | TTCTTTTAGAAGTTCTACAA+AGG | - | chr1_3:5318431-5318450 | Msa0099220:intron | 25.0% |
| !!! | TCTTTTAGAAGTTCTACAAA+GGG | - | chr1_3:5318432-5318451 | Msa0099220:intron | 25.0% |
| ! | TTAAATAAGCTAATTCAAGC+AGG | + | chr1_3:5318458-5318477 | None:intergenic | 25.0% |
| !! | GCTTGAATTAGCTTATTTAA+TGG | - | chr1_3:5318458-5318477 | Msa0099220:intron | 25.0% |
| !!! | TATGTTGATGATTTGAAACT+TGG | + | chr1_3:5318641-5318660 | None:intergenic | 25.0% |
| !!! | GGTATTATTTTTGTTTTCGT+AGG | - | chr1_3:5318749-5318768 | Msa0099220:intron | 25.0% |
| !!! | TTGTACTGATTTTCTTGTTA+TGG | - | chr1_3:5318900-5318919 | Msa0099220:intron | 25.0% |
| !!! | TTTTGATTCCCAATAGATTA+TGG | - | chr1_3:5318930-5318949 | Msa0099220:intron | 25.0% |
| !! | TGTTATTGACAATTGGTTTA+TGG | - | chr1_3:5319572-5319591 | Msa0099220:intron | 25.0% |
| ! | CAGCTTGTATTAATTAATTC+AGG | + | chr1_3:5319683-5319702 | None:intergenic | 25.0% |
| !!! | AGAAGTAGAATGTTTTTTAC+AGG | - | chr1_3:5319733-5319752 | Msa0099220:intron | 25.0% |
| ! | AACTTCAAAATGAGCTTAAA+TGG | + | chr1_3:5319784-5319803 | None:intergenic | 25.0% |
| ! | ATCATCAGCTTGAAATTAAA+AGG | - | chr1_3:5319903-5319922 | Msa0099220:five_prime_UTR | 25.0% |
| TTATTCCAAACCAAATTCTG+GGG | - | chr1_3:5312183-5312202 | Msa0099220:three_prime_UTR | 30.0% | |
| !! | CACTTCTAGTTTGATTTGTA+TGG | + | chr1_3:5312451-5312470 | None:intergenic | 30.0% |
| AATGATGTCTCATCTAATGT+GGG | + | chr1_3:5312475-5312494 | None:intergenic | 30.0% | |
| ! | AGCTGGTCAAATGTATTTTT+AGG | - | chr1_3:5312886-5312905 | Msa0099220:CDS | 30.0% |
| ! | TACACTGATTATAGCAAAAG+AGG | + | chr1_3:5313097-5313116 | None:intergenic | 30.0% |
| ATGTCAATCTAATTCGATGT+CGG | + | chr1_3:5313327-5313346 | None:intergenic | 30.0% | |
| GCTCAAATAGTATGTAAATG+AGG | + | chr1_3:5313442-5313461 | None:intergenic | 30.0% | |
| !!! | TTTAGGCCCCTAATTTTTTT+AGG | + | chr1_3:5313545-5313564 | None:intergenic | 30.0% |
| TGTCATATCTGATACAATGT+GGG | + | chr1_3:5313639-5313658 | None:intergenic | 30.0% | |
| TTGTCATATCTGATACAATG+TGG | + | chr1_3:5313640-5313659 | None:intergenic | 30.0% | |
| CATTAAATGTCTCAGAATTC+GGG | + | chr1_3:5313733-5313752 | None:intergenic | 30.0% | |
| CCATTAAATGTCTCAGAATT+CGG | + | chr1_3:5313734-5313753 | None:intergenic | 30.0% | |
| GCTTCAACTTAATGTTATGT+TGG | - | chr1_3:5313784-5313803 | Msa0099220:CDS | 30.0% | |
| ! | GTCTTTGAAAAACTGAAGAA+AGG | + | chr1_3:5313923-5313942 | None:intergenic | 30.0% |
| !! | TTCTTCAGTTTTTCAAAGAC+CGG | - | chr1_3:5313923-5313942 | Msa0099220:exon | 30.0% |
| ATTCTTTATCCAAGTAATGC+CGG | + | chr1_3:5313945-5313964 | None:intergenic | 30.0% | |
| GCATTACTTGGATAAAGAAT+GGG | - | chr1_3:5313945-5313964 | Msa0099220:five_prime_UTR | 30.0% | |
| CATTACTTGGATAAAGAATG+GGG | - | chr1_3:5313946-5313965 | Msa0099220:five_prime_UTR | 30.0% | |
| !! | AGTAATCTTTTATTTCAGGG+AGG | - | chr1_3:5314062-5314081 | Msa0099220:intron | 30.0% |
| ! | AGGAGGAAAGAAAGTAATTT+TGG | - | chr1_3:5314082-5314101 | Msa0099220:intron | 30.0% |
| ! | AGGAAAGAAAGTAATTTTGG+AGG | - | chr1_3:5314085-5314104 | Msa0099220:intron | 30.0% |
| ACTTATTTCCATAAGCTTTC+TGG | - | chr1_3:5314288-5314307 | Msa0099220:intron | 30.0% | |
| ATGTAAATCGATCTAAGTGT+CGG | - | chr1_3:5314816-5314835 | Msa0099220:five_prime_UTR | 30.0% | |
| TGTTTCAAATAGATAGACCT+AGG | - | chr1_3:5314868-5314887 | Msa0099220:five_prime_UTR | 30.0% | |
| GTTTCAAATAGATAGACCTA+GGG | - | chr1_3:5314869-5314888 | Msa0099220:five_prime_UTR | 30.0% | |
| TTTCAAATAGATAGACCTAG+GGG | - | chr1_3:5314870-5314889 | Msa0099220:five_prime_UTR | 30.0% | |
| !! | AAAGAGTATCTAGCTATGAA+AGG | + | chr1_3:5314899-5314918 | None:intergenic | 30.0% |
| CAATTTACGTCCAATGTAAA+AGG | + | chr1_3:5315030-5315049 | None:intergenic | 30.0% | |
| TTATAGTTTCGATATGGTGT+TGG | - | chr1_3:5315067-5315086 | Msa0099220:intron | 30.0% | |
| AATCTCTTTGCACAAATCAT+CGG | + | chr1_3:5315383-5315402 | None:intergenic | 30.0% | |
| GTAACAATATCAACAGAAGA+TGG | + | chr1_3:5315409-5315428 | None:intergenic | 30.0% | |
| ! | TTATATTGAAGTACCTGACA+TGG | - | chr1_3:5315573-5315592 | Msa0099220:intron | 30.0% |
| AAATATCTGTTTACCATGTC+AGG | + | chr1_3:5315589-5315608 | None:intergenic | 30.0% | |
| ! | AAAACAATAGGCATCTTTTC+CGG | + | chr1_3:5315630-5315649 | None:intergenic | 30.0% |
| ATGCCTATATTGTTGTATCA+CGG | + | chr1_3:5316140-5316159 | None:intergenic | 30.0% | |
| TACAACAATATAGGCATACA+TGG | - | chr1_3:5316143-5316162 | Msa0099220:five_prime_UTR | 30.0% | |
| AATAAGGAAAGAACAGAACA+AGG | + | chr1_3:5316532-5316551 | None:intergenic | 30.0% | |
| GTGCATAATTCAGAATAACT+TGG | - | chr1_3:5316666-5316685 | Msa0099220:intron | 30.0% | |
| AGTAGTTAGACTTAAGTATG+CGG | - | chr1_3:5316691-5316710 | Msa0099220:intron | 30.0% | |
| TAGATACCATGATAAAGTAG+AGG | + | chr1_3:5316900-5316919 | None:intergenic | 30.0% | |
| !! | TTTTGAGAAAAGGGATTATG+AGG | + | chr1_3:5317006-5317025 | None:intergenic | 30.0% |
| AGGTATAGAAGATAAAGCTA+CGG | + | chr1_3:5317112-5317131 | None:intergenic | 30.0% | |
| AATGAAGGGTAAAATTGGAA+GGG | + | chr1_3:5317162-5317181 | None:intergenic | 30.0% | |
| AAATGAAGGGTAAAATTGGA+AGG | + | chr1_3:5317163-5317182 | None:intergenic | 30.0% | |
| AAGCTTAAAATTTGTCACGA+TGG | - | chr1_3:5317431-5317450 | Msa0099220:intron | 30.0% | |
| TTCAACTGTGTAAACAATCT+TGG | - | chr1_3:5317511-5317530 | Msa0099220:intron | 30.0% | |
| TGCTAAAATTCCATGAAACA+CGG | + | chr1_3:5317654-5317673 | None:intergenic | 30.0% | |
| ATTGTTTGACCGTCAAATAT+TGG | - | chr1_3:5317695-5317714 | Msa0099220:intron | 30.0% | |
| ! | GTTGATGAATTTCCTTGTTT+GGG | - | chr1_3:5317717-5317736 | Msa0099220:intron | 30.0% |
| ! | AATTATTGATTGCCCAAACA+AGG | + | chr1_3:5317732-5317751 | None:intergenic | 30.0% |
| TTTATATAGGAGAGATTCTC+TGG | - | chr1_3:5317763-5317782 | Msa0099220:intron | 30.0% | |
| ! | AGCGATAACTTTTATGTTAG+AGG | - | chr1_3:5317802-5317821 | Msa0099220:intron | 30.0% |
| ! | AACTTTTATGTTAGAGGTGA+CGG | - | chr1_3:5317808-5317827 | Msa0099220:intron | 30.0% |
| CATGTGAACTAAAGATAACA+TGG | + | chr1_3:5317855-5317874 | None:intergenic | 30.0% | |
| !! | TTTATTTTCCTTCTGTTTGC+TGG | - | chr1_3:5318120-5318139 | Msa0099220:intron | 30.0% |
| !! | CTTGATGGTGATAACAATAT+TGG | - | chr1_3:5318222-5318241 | Msa0099220:intron | 30.0% |
| GCAATCGAGAAAAATAATTG+TGG | - | chr1_3:5318249-5318268 | Msa0099220:intron | 30.0% | |
| ! | TTTCATCTTTTTGCTCCATT+TGG | - | chr1_3:5318361-5318380 | Msa0099220:intron | 30.0% |
| TCATCAACATAAAACAACCA+AGG | - | chr1_3:5318650-5318669 | Msa0099220:intron | 30.0% | |
| ! | TATGTTTAAGATTTGAGCCT+TGG | + | chr1_3:5318670-5318689 | None:intergenic | 30.0% |
| AGATCTTGCATAAGATTGAA+AGG | + | chr1_3:5318822-5318841 | None:intergenic | 30.0% | |
| GTTGATCTCCATAATCTATT+GGG | + | chr1_3:5318941-5318960 | None:intergenic | 30.0% | |
| GAAAATCCCAATATTGTTTC+CGG | - | chr1_3:5319075-5319094 | Msa0099220:intron | 30.0% | |
| ! | CTTTTTCCGGAAACAATATT+GGG | + | chr1_3:5319084-5319103 | None:intergenic | 30.0% |
| CAATATTGTTTCCGGAAAAA+GGG | - | chr1_3:5319083-5319102 | Msa0099220:intron | 30.0% | |
| TAGCTACAAAAAAACTTGAG+TGG | - | chr1_3:5319259-5319278 | Msa0099220:intron | 30.0% | |
| AGCTACAAAAAAACTTGAGT+GGG | - | chr1_3:5319260-5319279 | Msa0099220:intron | 30.0% | |
| ! | AGATCACATAGAAAGCATAA+AGG | - | chr1_3:5319290-5319309 | Msa0099220:intron | 30.0% |
| ATATGGCAAAGAATAAGTAC+AGG | + | chr1_3:5319447-5319466 | None:intergenic | 30.0% | |
| GGTTTATATTAGTAGACAAG+TGG | - | chr1_3:5319517-5319536 | Msa0099220:intron | 30.0% | |
| AAAGTGAGAAGCAAATCAAT+GGG | + | chr1_3:5319853-5319872 | None:intergenic | 30.0% | |
| !! | ATTGATTTGCTTCTCACTTT+GGG | - | chr1_3:5319853-5319872 | Msa0099220:five_prime_UTR | 30.0% |
| ! | ATTTGCCACTTCAAACTCAA+AGG | - | chr1_3:5312152-5312171 | Msa0099220:three_prime_UTR | 35.0% |
| GAGAAGGAAAGAAAGAAAGA+GGG | + | chr1_3:5312234-5312253 | None:intergenic | 35.0% | |
| TGAGAAGGAAAGAAAGAAAG+AGG | + | chr1_3:5312235-5312254 | None:intergenic | 35.0% | |
| GAAAACTAACCTTGTCTTTG+TGG | + | chr1_3:5312370-5312389 | None:intergenic | 35.0% | |
| GAATGATGTCTCATCTAATG+TGG | + | chr1_3:5312476-5312495 | None:intergenic | 35.0% | |
| AGAGGCTATCCATTATTTGT+TGG | - | chr1_3:5312556-5312575 | Msa0099220:CDS | 35.0% | |
| CTTAGTGGTCCAACAAATAA+TGG | + | chr1_3:5312568-5312587 | None:intergenic | 35.0% | |
| ! | CATTATTTGTTGGACCACTA+AGG | - | chr1_3:5312566-5312585 | Msa0099220:CDS | 35.0% |
| ! | AATCTAAAGTGTGACCTTAG+TGG | + | chr1_3:5312583-5312602 | None:intergenic | 35.0% |
| ATAGACACAATAGAAGGGAA+AGG | - | chr1_3:5312622-5312641 | Msa0099220:CDS | 35.0% | |
| TAGACACAATAGAAGGGAAA+GGG | - | chr1_3:5312623-5312642 | Msa0099220:CDS | 35.0% | |
| TATAGTTGCTCTACAATCAC+AGG | - | chr1_3:5312749-5312768 | Msa0099220:CDS | 35.0% | |
| AAAATACATTTGACCAGCTC+TGG | + | chr1_3:5312885-5312904 | None:intergenic | 35.0% | |
| TTTACGATTGAGGGAACTTA+TGG | + | chr1_3:5312983-5313002 | None:intergenic | 35.0% | |
| GTCAGCTAGAAATCAAACTT+TGG | - | chr1_3:5313048-5313067 | Msa0099220:intron | 35.0% | |
| TTAGATTGACATGAACCTGA+AGG | - | chr1_3:5313335-5313354 | Msa0099220:intron | 35.0% | |
| ! | CTTAAAGTCTTTTTGCCTTC+AGG | + | chr1_3:5313353-5313372 | None:intergenic | 35.0% |
| CTGAAGGCAAAAAGACTTTA+AGG | - | chr1_3:5313351-5313370 | Msa0099220:intron | 35.0% | |
| CAAAGACAAAAATATGAGGC+CGG | - | chr1_3:5313507-5313526 | Msa0099220:intron | 35.0% | |
| ACACGGAGCCTAAAAAAATT+AGG | - | chr1_3:5313534-5313553 | Msa0099220:intron | 35.0% | |
| CACGGAGCCTAAAAAAATTA+GGG | - | chr1_3:5313535-5313554 | Msa0099220:intron | 35.0% | |
| ACGGAGCCTAAAAAAATTAG+GGG | - | chr1_3:5313536-5313555 | Msa0099220:intron | 35.0% | |
| !! | AAAACCGGTTTGTAAGTTGA+GGG | + | chr1_3:5313689-5313708 | None:intergenic | 35.0% |
| !! | ACTTACAAACCGGTTTTGTA+AGG | - | chr1_3:5313692-5313711 | Msa0099220:CDS | 35.0% |
| !! | CCGAATTCTGAGACATTTAA+TGG | - | chr1_3:5313731-5313750 | Msa0099220:CDS | 35.0% |
| GGCATTACTTGGATAAAGAA+TGG | - | chr1_3:5313944-5313963 | Msa0099220:five_prime_UTR | 35.0% | |
| !! | ATTACTTTTCAGTGAGTGGA+AGG | - | chr1_3:5313971-5313990 | Msa0099220:five_prime_UTR | 35.0% |
| ATTACTTAACTCATCAGCAC+AGG | + | chr1_3:5314048-5314067 | None:intergenic | 35.0% | |
| !! | AATCTTTTATTTCAGGGAGG+AGG | - | chr1_3:5314065-5314084 | Msa0099220:intron | 35.0% |
| ! | GAGGTTAAAGAGCATAATGT+GGG | + | chr1_3:5314122-5314141 | None:intergenic | 35.0% |
| ! | AGAGGTTAAAGAGCATAATG+TGG | + | chr1_3:5314123-5314142 | None:intergenic | 35.0% |
| ACTCATTTGAACTTGTCTAC+TGG | - | chr1_3:5314195-5314214 | Msa0099220:intron | 35.0% | |
| TAAGCTATCCAGAAAGCTTA+TGG | + | chr1_3:5314299-5314318 | None:intergenic | 35.0% | |
| !! | AGAAGTGTTGTTTACTGAAC+AGG | - | chr1_3:5314562-5314581 | Msa0099220:intron | 35.0% |
| ! | TGTTGTTTACTGAACAGGTT+GGG | - | chr1_3:5314567-5314586 | Msa0099220:intron | 35.0% |
| TGATGCTATCACAGGAAATA+TGG | + | chr1_3:5314609-5314628 | None:intergenic | 35.0% | |
| !! | CATGCATAAACAAAAGCATC+TGG | + | chr1_3:5314635-5314654 | None:intergenic | 35.0% |
| TTAACCAATTCAATAGCTCG+TGG | + | chr1_3:5314668-5314687 | None:intergenic | 35.0% | |
| ACGAGCTATTGAATTGGTTA+AGG | - | chr1_3:5314667-5314686 | Msa0099220:intron | 35.0% | |
| GCTATTGAATTGGTTAAGGT+TGG | - | chr1_3:5314671-5314690 | Msa0099220:intron | 35.0% | |
| !! | TGAGACTTTCGCGTTTTAAT+GGG | + | chr1_3:5314946-5314965 | None:intergenic | 35.0% |
| GTCACAGTTCAACTAACTTT+AGG | - | chr1_3:5315140-5315159 | Msa0099220:intron | 35.0% | |
| ! | AAACAATAGGCATCTTTTCC+GGG | + | chr1_3:5315629-5315648 | None:intergenic | 35.0% |
| CTAATCATGTCTATGATGAC+CGG | - | chr1_3:5315904-5315923 | Msa0099220:intron | 35.0% | |
| ! | GTGTTGGTGTATATGCTTTA+TGG | + | chr1_3:5316091-5316110 | None:intergenic | 35.0% |
| TTTGTCGAATCTCTATGACA+TGG | + | chr1_3:5316170-5316189 | None:intergenic | 35.0% | |
| ! | GATTCGACAAAGTTTTACGT+TGG | - | chr1_3:5316179-5316198 | Msa0099220:intron | 35.0% |
| GGAGAAGAAAAGACTGAAAA+AGG | + | chr1_3:5316312-5316331 | None:intergenic | 35.0% | |
| GTTAGATTCAGCTTCTCATA+AGG | + | chr1_3:5316333-5316352 | None:intergenic | 35.0% | |
| ! | ATGAGGAGAAGCATAAAACT+AGG | + | chr1_3:5316482-5316501 | None:intergenic | 35.0% |
| GTTCTGTTCTTTCCTTATTC+TGG | - | chr1_3:5316533-5316552 | Msa0099220:five_prime_UTR | 35.0% | |
| TACACACACTTAACACGTAT+GGG | + | chr1_3:5316608-5316627 | None:intergenic | 35.0% | |
| TTACACACACTTAACACGTA+TGG | + | chr1_3:5316609-5316628 | None:intergenic | 35.0% | |
| GTTCTGTTGTACTAGTTAGT+TGG | - | chr1_3:5316757-5316776 | Msa0099220:intron | 35.0% | |
| ATGTACTCACTCTATAGTTC+AGG | - | chr1_3:5316826-5316845 | Msa0099220:intron | 35.0% | |
| TGTACTCACTCTATAGTTCA+GGG | - | chr1_3:5316827-5316846 | Msa0099220:intron | 35.0% | |
| CTCTAACCTCTACTTTATCA+TGG | - | chr1_3:5316891-5316910 | Msa0099220:intron | 35.0% | |
| !! | TGGTATCTAGAGTTTTTCTC+TGG | - | chr1_3:5316911-5316930 | Msa0099220:intron | 35.0% |
| !! | GGTATCTAGAGTTTTTCTCT+GGG | - | chr1_3:5316912-5316931 | Msa0099220:intron | 35.0% |
| ! | TTTTAACCAACACAGTTGAG+CGG | + | chr1_3:5316982-5317001 | None:intergenic | 35.0% |
| ! | TAGCTTTTGATATTCACGCT+AGG | + | chr1_3:5317085-5317104 | None:intergenic | 35.0% |
| ATGAAGGGTAAAATTGGAAG+GGG | + | chr1_3:5317161-5317180 | None:intergenic | 35.0% | |
| CAAACACGTCATACAATTGT+TGG | - | chr1_3:5317595-5317614 | Msa0099220:intron | 35.0% | |
| !! | GGTTGATGAATTTCCTTGTT+TGG | - | chr1_3:5317716-5317735 | Msa0099220:intron | 35.0% |
| !! | CAAGGGAGTTGATAATGAAA+CGG | - | chr1_3:5318026-5318045 | Msa0099220:intron | 35.0% |
| ACTGAGCAAAAATGAACAAG+TGG | + | chr1_3:5318065-5318084 | None:intergenic | 35.0% | |
| CTGAAACACAAAATACAGCT+TGG | + | chr1_3:5318161-5318180 | None:intergenic | 35.0% | |
| ! | GCTGTATTTTGTGTTTCAGA+TGG | - | chr1_3:5318162-5318181 | Msa0099220:intron | 35.0% |
| TGGTGATAACAATATTGGCA+CGG | - | chr1_3:5318227-5318246 | Msa0099220:intron | 35.0% | |
| TCTGTAATTGACATGTCTGA+GGG | - | chr1_3:5318285-5318304 | Msa0099220:intron | 35.0% | |
| GGCATAATCACTTATAAGCA+AGG | - | chr1_3:5318479-5318498 | Msa0099220:intron | 35.0% | |
| AGATCTAGCATAAGATCGAA+AGG | - | chr1_3:5318514-5318533 | Msa0099220:intron | 35.0% | |
| GATCTAGCATAAGATCGAAA+GGG | - | chr1_3:5318515-5318534 | Msa0099220:intron | 35.0% | |
| ATCTAGCATAAGATCGAAAG+GGG | - | chr1_3:5318516-5318535 | Msa0099220:intron | 35.0% | |
| ! | GATGATTTGAAACTTGGAGT+AGG | + | chr1_3:5318635-5318654 | None:intergenic | 35.0% |
| AAGATCACAACCAAGATCAA+AGG | + | chr1_3:5318777-5318796 | None:intergenic | 35.0% | |
| ! | AAAAGACATGGTCGCTATTT+TGG | - | chr1_3:5318865-5318884 | Msa0099220:intron | 35.0% |
| GGTTGATCTCCATAATCTAT+TGG | + | chr1_3:5318942-5318961 | None:intergenic | 35.0% | |
| ATTATGGAGATCAACCTTAG+AGG | - | chr1_3:5318946-5318965 | Msa0099220:intron | 35.0% | |
| !!! | TTTTGAAATTCCAGCCTCTA+AGG | + | chr1_3:5318963-5318982 | None:intergenic | 35.0% |
| ! | CAATATTGGGATTTTCTGCA+AGG | + | chr1_3:5319071-5319090 | None:intergenic | 35.0% |
| ! | CCTTTTTCCGGAAACAATAT+TGG | + | chr1_3:5319085-5319104 | None:intergenic | 35.0% |
| CCAATATTGTTTCCGGAAAA+AGG | - | chr1_3:5319082-5319101 | Msa0099220:intron | 35.0% | |
| ! | TAACTCCAATACCCTTTTTC+CGG | + | chr1_3:5319097-5319116 | None:intergenic | 35.0% |
| !! | GAAAAAGGGTATTGGAGTTA+GGG | - | chr1_3:5319097-5319116 | Msa0099220:intron | 35.0% |
| !!! | ATGCAACATTTTTGGCTAAC+AGG | + | chr1_3:5319209-5319228 | None:intergenic | 35.0% |
| GCTACAAAAAAACTTGAGTG+GGG | - | chr1_3:5319261-5319280 | Msa0099220:intron | 35.0% | |
| ATAAAGGAGATGAGTGATAG+AGG | - | chr1_3:5319306-5319325 | Msa0099220:intron | 35.0% | |
| TAAAGGAGATGAGTGATAGA+GGG | - | chr1_3:5319307-5319326 | Msa0099220:intron | 35.0% | |
| ! | TCTTTTGCAGTTGCAAACAA+AGG | + | chr1_3:5319384-5319403 | None:intergenic | 35.0% |
| TTTCAGCTGCATCACAATTT+GGG | - | chr1_3:5319496-5319515 | Msa0099220:intron | 35.0% | |
| ! | CTCGAAGTGTTATTGACAAT+TGG | - | chr1_3:5319565-5319584 | Msa0099220:intron | 35.0% |
| AAACATATTGCTCTTCTGCA+TGG | - | chr1_3:5319632-5319651 | Msa0099220:intron | 35.0% | |
| CAAAGTGAGAAGCAAATCAA+TGG | + | chr1_3:5319854-5319873 | None:intergenic | 35.0% | |
| !! | CATTGATTTGCTTCTCACTT+TGG | - | chr1_3:5319852-5319871 | Msa0099220:five_prime_UTR | 35.0% |
| !! | TTGATTTGCTTCTCACTTTG+GGG | - | chr1_3:5319854-5319873 | Msa0099220:five_prime_UTR | 35.0% |
| GAGAACGTTCTACATATGAA+TGG | + | chr1_3:5319883-5319902 | None:intergenic | 35.0% | |
| GATAAACCCTGAAACTGAAG+TGG | - | chr1_3:5312042-5312061 | Msa0099220:three_prime_UTR | 40.0% | |
| CAAAGACCACTTCAGTTTCA+GGG | + | chr1_3:5312051-5312070 | None:intergenic | 40.0% | |
| ACAAAGACCACTTCAGTTTC+AGG | + | chr1_3:5312052-5312071 | None:intergenic | 40.0% | |
| CACGTTAATGCTTGATCTCA+CGG | - | chr1_3:5312108-5312127 | Msa0099220:three_prime_UTR | 40.0% | |
| ! | TGCAACCTTTGAGTTTGAAG+TGG | + | chr1_3:5312160-5312179 | None:intergenic | 40.0% |
| AGGAAAGAAAGAAAGAGGGT+AGG | + | chr1_3:5312230-5312249 | None:intergenic | 40.0% | |
| CTACAAACACCACAAAGACA+AGG | - | chr1_3:5312358-5312377 | Msa0099220:CDS | 40.0% | |
| !! | ACTGCACAAGCAAGTTTTGT+AGG | - | chr1_3:5312496-5312515 | Msa0099220:CDS | 40.0% |
| AGACACAATAGAAGGGAAAG+GGG | - | chr1_3:5312624-5312643 | Msa0099220:CDS | 40.0% | |
| !! | TTGGTTTGTCACATTGTGAG+AGG | - | chr1_3:5313067-5313086 | Msa0099220:intron | 40.0% |
| TCGAACTTGCAAACGAACTA+CGG | - | chr1_3:5313414-5313433 | Msa0099220:intron | 40.0% | |
| !! | CGGCCTCATATTTTTGTCTT+TGG | + | chr1_3:5313509-5313528 | None:intergenic | 40.0% |
| ! | TAGCATCTAGGACTAAACCA+GGG | + | chr1_3:5313601-5313620 | None:intergenic | 40.0% |
| TGGTTTAGTCCTAGATGCTA+GGG | - | chr1_3:5313601-5313620 | Msa0099220:intron | 40.0% | |
| !! | CAAAACCGGTTTGTAAGTTG+AGG | + | chr1_3:5313690-5313709 | None:intergenic | 40.0% |
| ! | TGTTGGGTTCTTCTTGTTTG+TGG | - | chr1_3:5313801-5313820 | Msa0099220:intron | 40.0% |
| TTTCAAAGACCGGCATTACT+TGG | - | chr1_3:5313933-5313952 | Msa0099220:five_prime_UTR | 40.0% | |
| !! | GGAGATTACTTTTCAGTGAG+TGG | - | chr1_3:5313967-5313986 | Msa0099220:five_prime_UTR | 40.0% |
| !! | GTGTTGTTTACTGAACAGGT+TGG | - | chr1_3:5314566-5314585 | Msa0099220:intron | 40.0% |
| TCTGGATATGATGCTATCAC+AGG | + | chr1_3:5314617-5314636 | None:intergenic | 40.0% | |
| TTTGCACAGTAGCTTGACTT+TGG | - | chr1_3:5314750-5314769 | Msa0099220:intron | 40.0% | |
| ! | GTGAGACTTTCGCGTTTTAA+TGG | + | chr1_3:5314947-5314966 | None:intergenic | 40.0% |
| ! | TAGTTTCGATATGGTGTTGG+TGG | - | chr1_3:5315070-5315089 | Msa0099220:intron | 40.0% |
| !! | ACCAGGAAGCACATTTTGAA+GGG | + | chr1_3:5315110-5315129 | None:intergenic | 40.0% |
| TCTTCATGCATCTGCAGTTA+AGG | + | chr1_3:5315316-5315335 | None:intergenic | 40.0% | |
| GCAGATGCATGAAGACTTTA+AGG | - | chr1_3:5315321-5315340 | Msa0099220:intron | 40.0% | |
| ! | AACAATAGGCATCTTTTCCG+GGG | + | chr1_3:5315628-5315647 | None:intergenic | 40.0% |
| TTTGGCTGCAAATGGAGAAA+GGG | + | chr1_3:5315759-5315778 | None:intergenic | 40.0% | |
| ATTTGGCTGCAAATGGAGAA+AGG | + | chr1_3:5315760-5315779 | None:intergenic | 40.0% | |
| TTTCTCCATTTGCAGCCAAA+TGG | - | chr1_3:5315759-5315778 | Msa0099220:intron | 40.0% | |
| CATATCCATTTGGCTGCAAA+TGG | + | chr1_3:5315767-5315786 | None:intergenic | 40.0% | |
| CAACAAAATCAACCTGAGCA+AGG | + | chr1_3:5315818-5315837 | None:intergenic | 40.0% | |
| ! | CTAAGCACTTGTCAGTTTTC+TGG | + | chr1_3:5315858-5315877 | None:intergenic | 40.0% |
| CTTACTCCTGAGCTAAAACA+AGG | - | chr1_3:5316031-5316050 | Msa0099220:intron | 40.0% | |
| !!! | GATTGACCTTGTTTTAGCTC+AGG | + | chr1_3:5316040-5316059 | None:intergenic | 40.0% |
| AAGCATATACACCAACACGT+TGG | - | chr1_3:5316093-5316112 | Msa0099220:intron | 40.0% | |
| ACGCCGTGATACAACAATAT+AGG | - | chr1_3:5316134-5316153 | Msa0099220:intron | 40.0% | |
| TAAAAGGAGAGGGTTGTGTT+AGG | + | chr1_3:5316214-5316233 | None:intergenic | 40.0% | |
| ATATTAAATCCTGCCAAGGC+CGG | + | chr1_3:5316250-5316269 | None:intergenic | 40.0% | |
| GCCTTGGCAGGATTTAATAT+AGG | - | chr1_3:5316250-5316269 | Msa0099220:intron | 40.0% | |
| GCCTATATTAAATCCTGCCA+AGG | + | chr1_3:5316254-5316273 | None:intergenic | 40.0% | |
| AGAAAAGCTGTTGTATGCTC+AGG | - | chr1_3:5316417-5316436 | Msa0099220:intron | 40.0% | |
| GAGAGGAGAAAACCAGAATA+AGG | + | chr1_3:5316548-5316567 | None:intergenic | 40.0% | |
| TGTATAGGATGAAGATGGAG+AGG | + | chr1_3:5316565-5316584 | None:intergenic | 40.0% | |
| ! | CACTTATTAGTCAGAGCATC+GGG | + | chr1_3:5316649-5316668 | None:intergenic | 40.0% |
| GCACTTATTAGTCAGAGCAT+CGG | + | chr1_3:5316650-5316669 | None:intergenic | 40.0% | |
| GTTCGACTTATGCTCTTCAT+TGG | - | chr1_3:5317455-5317474 | Msa0099220:intron | 40.0% | |
| TTTACACAGTTGAACCCAAC+TGG | + | chr1_3:5317505-5317524 | None:intergenic | 40.0% | |
| ACTGTGTAAACAATCTTGGC+AGG | - | chr1_3:5317515-5317534 | Msa0099220:intron | 40.0% | |
| TAAACAATCTTGGCAGGTCT+TGG | - | chr1_3:5317521-5317540 | Msa0099220:intron | 40.0% | |
| !! | TTCCTGCTTTAAAGCCAGAA+TGG | - | chr1_3:5317567-5317586 | Msa0099220:intron | 40.0% |
| CGTCATACAATTGTTGGTGT+TGG | - | chr1_3:5317601-5317620 | Msa0099220:intron | 40.0% | |
| ! | CACGGCAATGAATGTTACTT+CGG | + | chr1_3:5317636-5317655 | None:intergenic | 40.0% |
| ACATTCATTGCCGTGTTTCA+TGG | - | chr1_3:5317641-5317660 | Msa0099220:intron | 40.0% | |
| TTGAAAAATAGTAAGCGCGC+TGG | + | chr1_3:5317922-5317941 | None:intergenic | 40.0% | |
| TCATTATCAACTCCCTTGAG+CGG | + | chr1_3:5318024-5318043 | None:intergenic | 40.0% | |
| AGCTTCTTTACTGGAAGAGT+TGG | + | chr1_3:5318190-5318209 | None:intergenic | 40.0% | |
| CTCTGTAATTGACATGTCTG+AGG | - | chr1_3:5318284-5318303 | Msa0099220:intron | 40.0% | |
| GATATGCTCGAATAAAGAGC+TGG | + | chr1_3:5318394-5318413 | None:intergenic | 40.0% | |
| AAGAATAGGCAACCTCAGAT+GGG | + | chr1_3:5318416-5318435 | None:intergenic | 40.0% | |
| AAAGAATAGGCAACCTCAGA+TGG | + | chr1_3:5318417-5318436 | None:intergenic | 40.0% | |
| AAGATCGCAACCAAGATTGA+AGG | - | chr1_3:5318559-5318578 | Msa0099220:intron | 40.0% | |
| AGATCGCAACCAAGATTGAA+GGG | - | chr1_3:5318560-5318579 | Msa0099220:intron | 40.0% | |
| TTCGTAGGATCCTTTGATCT+TGG | - | chr1_3:5318764-5318783 | Msa0099220:intron | 40.0% | |
| ! | ACCATGTCTTTTGTTGAGCA+GGG | + | chr1_3:5318857-5318876 | None:intergenic | 40.0% |
| !! | CAGTTGATTTGCAGGTATGT+TGG | + | chr1_3:5319008-5319027 | None:intergenic | 40.0% |
| CAACATACCTGCAAATCAAC+TGG | - | chr1_3:5319006-5319025 | Msa0099220:intron | 40.0% | |
| !! | CATCAAACCAGTTGATTTGC+AGG | + | chr1_3:5319016-5319035 | None:intergenic | 40.0% |
| !! | AATCAACTGGTTTGATGCTG+TGG | - | chr1_3:5319019-5319038 | Msa0099220:intron | 40.0% |
| !! | ATCAACTGGTTTGATGCTGT+GGG | - | chr1_3:5319020-5319039 | Msa0099220:intron | 40.0% |
| ! | ATTGGGATTTTCTGCAAGGA+CGG | + | chr1_3:5319067-5319086 | None:intergenic | 40.0% |
| ! | TGTTTCCGGAAAAAGGGTAT+TGG | - | chr1_3:5319089-5319108 | Msa0099220:intron | 40.0% |
| !! | GGAAAAAGGGTATTGGAGTT+AGG | - | chr1_3:5319096-5319115 | Msa0099220:intron | 40.0% |
| ATCTGTAGCAACTACTCGAT+CGG | + | chr1_3:5319166-5319185 | None:intergenic | 40.0% | |
| ! | GTAGCTAGTTTAGTCAGCAA+TGG | + | chr1_3:5319246-5319265 | None:intergenic | 40.0% |
| AGAGGGTTCAATGTCATCAT+CGG | - | chr1_3:5319324-5319343 | Msa0099220:intron | 40.0% | |
| CTTTCAGCTGCATCACAATT+TGG | - | chr1_3:5319495-5319514 | Msa0099220:intron | 40.0% | |
| ATAACACTTCGAGACGTTTC+AGG | + | chr1_3:5319558-5319577 | None:intergenic | 40.0% | |
| AATGCTTGATCTCACGGCAA+TGG | - | chr1_3:5312114-5312133 | Msa0099220:three_prime_UTR | 45.0% | |
| TGAGACCCCAGAATTTGGTT+TGG | + | chr1_3:5312191-5312210 | None:intergenic | 45.0% | |
| GTTGCTCTACAATCACAGGT+AGG | - | chr1_3:5312753-5312772 | Msa0099220:CDS | 45.0% | |
| CAAGATGTTTAGTCCAGAGC+TGG | - | chr1_3:5312869-5312888 | Msa0099220:CDS | 45.0% | |
| ! | AATATGAGGCCGGCTTAACA+CGG | - | chr1_3:5313517-5313536 | Msa0099220:intron | 45.0% |
| ! | TTTTAGGCTCCGTGTTAAGC+CGG | + | chr1_3:5313529-5313548 | None:intergenic | 45.0% |
| ! | CTAGCATCTAGGACTAAACC+AGG | + | chr1_3:5313602-5313621 | None:intergenic | 45.0% |
| CTGGTTTAGTCCTAGATGCT+AGG | - | chr1_3:5313600-5313619 | Msa0099220:intron | 45.0% | |
| CATAACACACCCTAGCATCT+AGG | + | chr1_3:5313613-5313632 | None:intergenic | 45.0% | |
| TCGTCCCTCAACTTACAAAC+CGG | - | chr1_3:5313682-5313701 | Msa0099220:CDS | 45.0% | |
| CTAACGCGACCTTACAAAAC+CGG | + | chr1_3:5313704-5313723 | None:intergenic | 45.0% | |
| ! | TTTACTGAACAGGTTGGGTG+TGG | - | chr1_3:5314572-5314591 | Msa0099220:intron | 45.0% |
| CTCACCACGAGCTATTGAAT+TGG | - | chr1_3:5314661-5314680 | Msa0099220:intron | 45.0% | |
| !! | GATCTAAGTGTCGGTAGCAT+TGG | - | chr1_3:5314825-5314844 | Msa0099220:five_prime_UTR | 45.0% |
| TCCCTTCAAAATGTGCTTCC+TGG | - | chr1_3:5315106-5315125 | Msa0099220:intron | 45.0% | |
| !! | CACCAGGAAGCACATTTTGA+AGG | + | chr1_3:5315111-5315130 | None:intergenic | 45.0% |
| CTGTGACAAAAGATCACACC+AGG | + | chr1_3:5315127-5315146 | None:intergenic | 45.0% | |
| ! | AGCGACAAAAGCGTGAACAT+GGG | + | chr1_3:5315350-5315369 | None:intergenic | 45.0% |
| TATGTTATCTGCAGTGTCCC+CGG | - | chr1_3:5315608-5315627 | Msa0099220:intron | 45.0% | |
| TTTGGACATTGCCAACGTGT+TGG | + | chr1_3:5316107-5316126 | None:intergenic | 45.0% | |
| TATCACGGCGTCTTGAACTT+TGG | + | chr1_3:5316125-5316144 | None:intergenic | 45.0% | |
| !! | AAGTTTTACGTTGGCTGTCG+AGG | - | chr1_3:5316188-5316207 | Msa0099220:intron | 45.0% |
| GCATAAAACTAGGCTCAGTC+TGG | + | chr1_3:5316472-5316491 | None:intergenic | 45.0% | |
| GAGAACAAGAAACAGTCGCT+AGG | + | chr1_3:5316510-5316529 | None:intergenic | 45.0% | |
| TAGACTTAAGTATGCGGCAG+TGG | - | chr1_3:5316697-5316716 | Msa0099220:intron | 45.0% | |
| ! | TGGGCCTGTTTCTTCATTTG+AGG | - | chr1_3:5316931-5316950 | Msa0099220:intron | 45.0% |
| ! | GGGCCTGTTTCTTCATTTGA+GGG | - | chr1_3:5316932-5316951 | Msa0099220:intron | 45.0% |
| ! | GGCCTGTTTCTTCATTTGAG+GGG | - | chr1_3:5316933-5316952 | Msa0099220:intron | 45.0% |
| AGCCCCTCAAATGAAGAAAC+AGG | + | chr1_3:5316938-5316957 | None:intergenic | 45.0% | |
| TTGAGCGGATCTTGAAGAAG+AGG | + | chr1_3:5316967-5316986 | None:intergenic | 45.0% | |
| CGACTTATGCTCTTCATTGG+AGG | - | chr1_3:5317458-5317477 | Msa0099220:intron | 45.0% | |
| !! | CTCCATTCTGGCTTTAAAGC+AGG | + | chr1_3:5317572-5317591 | None:intergenic | 45.0% |
| ACGTGTTTGACACTCCATTC+TGG | + | chr1_3:5317584-5317603 | None:intergenic | 45.0% | |
| ATAGGAGAGATTCTCTGGCA+AGG | - | chr1_3:5317768-5317787 | Msa0099220:intron | 45.0% | |
| GCGCTGGATAGGAAACAAAA+AGG | + | chr1_3:5317906-5317925 | None:intergenic | 45.0% | |
| AAATAGTAAGCGCGCTGGAT+AGG | + | chr1_3:5317917-5317936 | None:intergenic | 45.0% | |
| AAGAAGTTGAGAACCGCTCA+AGG | - | chr1_3:5318008-5318027 | Msa0099220:five_prime_UTR | 45.0% | |
| AGAAGTTGAGAACCGCTCAA+GGG | - | chr1_3:5318009-5318028 | Msa0099220:five_prime_UTR | 45.0% | |
| !! | TCCTTCTGTTTGCTGGTTTC+AGG | - | chr1_3:5318127-5318146 | Msa0099220:intron | 45.0% |
| CTCTTCCAGTAAAGAAGCTG+AGG | - | chr1_3:5318191-5318210 | Msa0099220:intron | 45.0% | |
| ATTCGCCTCAGCTTCTTTAC+TGG | + | chr1_3:5318199-5318218 | None:intergenic | 45.0% | |
| ATTGACATGTCTGAGGGAGT+CGG | - | chr1_3:5318291-5318310 | Msa0099220:intron | 45.0% | |
| AAGCCTTACCTCATACTCGT+CGG | + | chr1_3:5318343-5318362 | None:intergenic | 45.0% | |
| ATTCGAGCATATCCCATCTG+AGG | - | chr1_3:5318401-5318420 | Msa0099220:intron | 45.0% | |
| TGATGGGATCCCTTCAATCT+TGG | + | chr1_3:5318572-5318591 | None:intergenic | 45.0% | |
| ACCCTGCTCAACAAAAGACA+TGG | - | chr1_3:5318853-5318872 | Msa0099220:intron | 45.0% | |
| ! | GACCATGTCTTTTGTTGAGC+AGG | + | chr1_3:5318858-5318877 | None:intergenic | 45.0% |
| TGGTTTGATGCTGTGGGAAT+CGG | - | chr1_3:5319026-5319045 | Msa0099220:intron | 45.0% | |
| AAGGACGGAAGCCATTAATC+GGG | + | chr1_3:5319052-5319071 | None:intergenic | 45.0% | |
| CAAGGACGGAAGCCATTAAT+CGG | + | chr1_3:5319053-5319072 | None:intergenic | 45.0% | |
| GATCGAGTAGTTGCTACAGA+TGG | - | chr1_3:5319165-5319184 | Msa0099220:intron | 45.0% | |
| TTAGTAGACAAGTGGCCTAC+CGG | - | chr1_3:5319525-5319544 | Msa0099220:intron | 45.0% | |
| AGACGTTTCAGGCGAATTTC+CGG | + | chr1_3:5319547-5319566 | None:intergenic | 45.0% | |
| !!! | TTGATTTAAAATTTAAATTA+GGG | + | chr1_3:5317281-5317300 | None:intergenic | 5.0% |
| !!! | TTTGATTTAAAATTTAAATT+AGG | + | chr1_3:5317282-5317301 | None:intergenic | 5.0% |
| !! | ATAAAAATAATAATAGTAAA+TGG | - | chr1_3:5317387-5317406 | Msa0099220:intron | 5.0% |
| !!! | TTTGTATATTTAATTTATAT+AGG | - | chr1_3:5317750-5317769 | Msa0099220:intron | 5.0% |
| ATCTCACGGCAATGGCATCA+GGG | - | chr1_3:5312122-5312141 | Msa0099220:three_prime_UTR | 50.0% | |
| AAGGGTGAGACCCCAGAATT+TGG | + | chr1_3:5312196-5312215 | None:intergenic | 50.0% | |
| !!! | ATTCTGGGGTCTCACCCTTT+TGG | - | chr1_3:5312197-5312216 | Msa0099220:three_prime_UTR | 50.0% |
| GGGTAGGTACCTCTCCAAAA+GGG | + | chr1_3:5312214-5312233 | None:intergenic | 50.0% | |
| AGGGTAGGTACCTCTCCAAA+AGG | + | chr1_3:5312215-5312234 | None:intergenic | 50.0% | |
| ! | TCTGAAGCAAGAGCGTGAGA+AGG | + | chr1_3:5312250-5312269 | None:intergenic | 50.0% |
| CACAATAGAAGGGAAAGGGG+TGG | - | chr1_3:5312627-5312646 | Msa0099220:CDS | 50.0% | |
| AATAGAAGGGAAAGGGGTGG+AGG | - | chr1_3:5312630-5312649 | Msa0099220:CDS | 50.0% | |
| GTTCATGCAGAGTTCGCCAA+CGG | + | chr1_3:5312781-5312800 | None:intergenic | 50.0% | |
| TAAACCAGGGCCAGTCTAAG+GGG | + | chr1_3:5313588-5313607 | None:intergenic | 50.0% | |
| CTAAACCAGGGCCAGTCTAA+GGG | + | chr1_3:5313589-5313608 | None:intergenic | 50.0% | |
| ACTAAACCAGGGCCAGTCTA+AGG | + | chr1_3:5313590-5313609 | None:intergenic | 50.0% | |
| !! | CGGTTTTGTAAGGTCGCGTT+AGG | - | chr1_3:5313702-5313721 | Msa0099220:CDS | 50.0% |
| AGCTATGAAAGGCTTCCCCT+AGG | + | chr1_3:5314888-5314907 | None:intergenic | 50.0% | |
| ! | CAGCGACAAAAGCGTGAACA+TGG | + | chr1_3:5315351-5315370 | None:intergenic | 50.0% |
| CGCAGCAGCACATATCCATT+TGG | + | chr1_3:5315777-5315796 | None:intergenic | 50.0% | |
| ! | CACAACCCTCTCCTTTTACC+CGG | - | chr1_3:5316216-5316235 | Msa0099220:intron | 50.0% |
| ! | ACAACCCTCTCCTTTTACCC+GGG | - | chr1_3:5316217-5316236 | Msa0099220:intron | 50.0% |
| ACAGTCGCTAGGAAGAGATG+AGG | + | chr1_3:5316499-5316518 | None:intergenic | 50.0% | |
| ACTTAAGTATGCGGCAGTGG+TGG | - | chr1_3:5316700-5316719 | Msa0099220:intron | 50.0% | |
| CAAGATCCGCTCAACTGTGT+TGG | - | chr1_3:5316973-5316992 | Msa0099220:intron | 50.0% | |
| CATTGGAGGAAAGCAGAGTC+CGG | - | chr1_3:5317472-5317491 | Msa0099220:intron | 50.0% | |
| ATCTTGGCAGGTCTTGGACA+AGG | - | chr1_3:5317527-5317546 | Msa0099220:intron | 50.0% | |
| GCCTGAAACCAGCAAACAGA+AGG | + | chr1_3:5318131-5318150 | None:intergenic | 50.0% | |
| !! | TGTTTGCTGGTTTCAGGCGT+TGG | - | chr1_3:5318133-5318152 | Msa0099220:intron | 50.0% |
| !! | GTTTGCTGGTTTCAGGCGTT+GGG | - | chr1_3:5318134-5318153 | Msa0099220:intron | 50.0% |
| GCTGAGGCGAATCATCTTGA+TGG | - | chr1_3:5318207-5318226 | Msa0099220:intron | 50.0% | |
| TTGACATGTCTGAGGGAGTC+GGG | - | chr1_3:5318292-5318311 | Msa0099220:intron | 50.0% | |
| CTTACCTCATACTCGTCGGA+AGG | + | chr1_3:5318339-5318358 | None:intergenic | 50.0% | |
| CTTCCGACGAGTATGAGGTA+AGG | - | chr1_3:5318337-5318356 | Msa0099220:intron | 50.0% | |
| TGGAGATCAACCTTAGAGGC+TGG | - | chr1_3:5318950-5318969 | Msa0099220:intron | 50.0% | |
| !! | AGGGTATTGGAGTTAGGGTG+TGG | - | chr1_3:5319102-5319121 | Msa0099220:intron | 50.0% |
| CATCGACACGGCGAAAGATA+TGG | + | chr1_3:5319464-5319483 | None:intergenic | 50.0% | |
| !! | GCAACGTTGGTTCATCGACA+CGG | + | chr1_3:5319476-5319495 | None:intergenic | 50.0% |
| GATGCAGCTGAAAGCAACGT+TGG | + | chr1_3:5319489-5319508 | None:intergenic | 50.0% | |
| GTTTCAGGCGAATTTCCGGT+AGG | + | chr1_3:5319543-5319562 | None:intergenic | 50.0% | |
| GATCTCACGGCAATGGCATC+AGG | - | chr1_3:5312121-5312140 | Msa0099220:three_prime_UTR | 55.0% | |
| TCTCACGGCAATGGCATCAG+GGG | - | chr1_3:5312123-5312142 | Msa0099220:three_prime_UTR | 55.0% | |
| TGGAGGAGGAGTTGAGCTAG+CGG | - | chr1_3:5312647-5312666 | Msa0099220:CDS | 55.0% | |
| AGGAGTTGAGCTAGCGGTTC+AGG | - | chr1_3:5312653-5312672 | Msa0099220:CDS | 55.0% | |
| GGAGTTGAGCTAGCGGTTCA+GGG | - | chr1_3:5312654-5312673 | Msa0099220:CDS | 55.0% | |
| GAGTTGAGCTAGCGGTTCAG+GGG | - | chr1_3:5312655-5312674 | Msa0099220:CDS | 55.0% | |
| ! | CAATCACAGGTAGGCACCGT+TGG | - | chr1_3:5312762-5312781 | Msa0099220:CDS | 55.0% |
| GGCCTAAAGCCCTTGCTTCA+GGG | - | chr1_3:5313557-5313576 | Msa0099220:intron | 55.0% | |
| GCCTAAAGCCCTTGCTTCAG+GGG | - | chr1_3:5313558-5313577 | Msa0099220:intron | 55.0% | |
| AAACCAGGGCCAGTCTAAGG+GGG | + | chr1_3:5313587-5313606 | None:intergenic | 55.0% | |
| CTGCTGCGAGACTATGCTAC+TGG | - | chr1_3:5315789-5315808 | Msa0099220:intron | 55.0% | |
| TGCTACTGGAGACCTTGCTC+AGG | - | chr1_3:5315803-5315822 | Msa0099220:intron | 55.0% | |
| CAAGCCCGGGTAAAAGGAGA+GGG | + | chr1_3:5316224-5316243 | None:intergenic | 55.0% | |
| ! | CTCTCCTTTTACCCGGGCTT+GGG | - | chr1_3:5316223-5316242 | Msa0099220:intron | 55.0% |
| GCTCAGGAGTAATTGCCCCT+CGG | - | chr1_3:5316433-5316452 | Msa0099220:intron | 55.0% | |
| CTCAGGAGTAATTGCCCCTC+GGG | - | chr1_3:5316434-5316453 | Msa0099220:intron | 55.0% | |
| TCAGGAGTAATTGCCCCTCG+GGG | - | chr1_3:5316435-5316454 | Msa0099220:intron | 55.0% | |
| !!! | CAATGGCTGGTTTTCGTGGC+TGG | - | chr1_3:5317030-5317049 | Msa0099220:intron | 55.0% |
| !! | CTGGTTTTCGTGGCTGGTTC+AGG | - | chr1_3:5317036-5317055 | Msa0099220:intron | 55.0% |
| !!! | GGACCAGATGCTGGTTTTCG+TGG | - | chr1_3:5317057-5317076 | Msa0099220:intron | 55.0% |
| GAGCCACGAAAACCAGCATC+TGG | + | chr1_3:5317063-5317082 | None:intergenic | 55.0% | |
| TGACATGTCTGAGGGAGTCG+GGG | - | chr1_3:5318293-5318312 | Msa0099220:intron | 55.0% | |
| CTTGCCTTCCGACGAGTATG+AGG | - | chr1_3:5318332-5318351 | Msa0099220:intron | 55.0% | |
| AGAGCTGGAGAGCAGCCAAA+TGG | + | chr1_3:5318379-5318398 | None:intergenic | 55.0% | |
| GTGGGAATCGGCCCGATTAA+TGG | - | chr1_3:5319038-5319057 | Msa0099220:intron | 55.0% | |
| TTGGAGTTAGGGTGTGGCAG+TGG | - | chr1_3:5319108-5319127 | Msa0099220:intron | 55.0% | |
| !! | GGGGTCTCACCCTTTTGGAG+AGG | - | chr1_3:5312202-5312221 | Msa0099220:three_prime_UTR | 60.0% |
| AGAAGGGAAAGGGGTGGAGG+AGG | - | chr1_3:5312633-5312652 | Msa0099220:CDS | 60.0% | |
| GGGCCTAAAGCCCTTGCTTC+AGG | - | chr1_3:5313556-5313575 | Msa0099220:intron | 60.0% | |
| GCCCCTGAAGCAAGGGCTTT+AGG | + | chr1_3:5313562-5313581 | None:intergenic | 60.0% | |
| ! | GAACAGGTTGGGTGTGGAGC+TGG | - | chr1_3:5314578-5314597 | Msa0099220:intron | 60.0% |
| CCAAGCCCGGGTAAAAGGAG+AGG | + | chr1_3:5316225-5316244 | None:intergenic | 60.0% | |
| ! | CCTCTCCTTTTACCCGGGCT+TGG | - | chr1_3:5316222-5316241 | Msa0099220:intron | 60.0% |
| ! | CTTTTACCCGGGCTTGGGAC+CGG | - | chr1_3:5316228-5316247 | Msa0099220:intron | 60.0% |
| AGTAATTGCCCCTCGGGGAC+TGG | - | chr1_3:5316440-5316459 | Msa0099220:intron | 60.0% | |
| ! | GCTGGTTCAGGACCAGATGC+TGG | - | chr1_3:5317048-5317067 | Msa0099220:intron | 60.0% |
| GGAGTCGGGGCTGACATGTT+TGG | - | chr1_3:5318306-5318325 | Msa0099220:intron | 60.0% | |
| GAGTTAGGGTGTGGCAGTGG+TGG | - | chr1_3:5319111-5319130 | Msa0099220:intron | 60.0% | |
| CGGTCCCAAGCCCGGGTAAA+AGG | + | chr1_3:5316230-5316249 | None:intergenic | 65.0% | |
| AATTGCCCCTCGGGGACTGG+CGG | - | chr1_3:5316443-5316462 | Msa0099220:intron | 65.0% | |
| AGTCCGGCTGCACGCCAGTT+GGG | - | chr1_3:5317488-5317507 | Msa0099220:intron | 65.0% | |
| GAACCCAACTGGCGTGCAGC+CGG | + | chr1_3:5317494-5317513 | None:intergenic | 65.0% | |
| GGGGGCTGCCCCTGAAGCAA+GGG | + | chr1_3:5313569-5313588 | None:intergenic | 70.0% | |
| AGGGGGCTGCCCCTGAAGCA+AGG | + | chr1_3:5313570-5313589 | None:intergenic | 70.0% | |
| CAGGGGCAGCCCCCTTAGAC+TGG | - | chr1_3:5313575-5313594 | Msa0099220:intron | 70.0% | |
| ! | CAGCCCCCTTAGACTGGCCC+TGG | - | chr1_3:5313581-5313600 | Msa0099220:intron | 70.0% |
| TGGAGACCGCCAGTCCCCGA+GGG | + | chr1_3:5316452-5316471 | None:intergenic | 70.0% | |
| GAGTCCGGCTGCACGCCAGT+TGG | - | chr1_3:5317487-5317506 | Msa0099220:intron | 70.0% | |
| CCAAGGCCGGTCCCAAGCCC+GGG | + | chr1_3:5316237-5316256 | None:intergenic | 75.0% | |
| GCCAAGGCCGGTCCCAAGCC+CGG | + | chr1_3:5316238-5316257 | None:intergenic | 75.0% | |
| GGCTTGGGACCGGCCTTGGC+AGG | - | chr1_3:5316238-5316257 | Msa0099220:intron | 75.0% | |
| GGAGACCGCCAGTCCCCGAG+GGG | + | chr1_3:5316451-5316470 | None:intergenic | 75.0% | |
| CTGGAGACCGCCAGTCCCCG+AGG | + | chr1_3:5316453-5316472 | None:intergenic | 75.0% | |
| ! | CCCGGGCTTGGGACCGGCCT+TGG | - | chr1_3:5316234-5316253 | Msa0099220:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 5312029 | 5319935 | 5312029 | ID=Msa0099220;Name=Msa0099220 |
| chr1_3 | mRNA | 5312029 | 5319935 | 5312029 | ID=Msa0099220-mRNA-1;Parent=Msa0099220;Name=Msa0099220-mRNA-1;_AED=0.09;_eAED=0.09;_QI=1082|0.91|0.92|1|0.5|0.76|13|276|307 |
| chr1_3 | exon | 5312029 | 5313015 | 5312029 | ID=Msa0099220-mRNA-1:exon:1965;Parent=Msa0099220-mRNA-1 |
| chr1_3 | exon | 5313611 | 5313815 | 5313611 | ID=Msa0099220-mRNA-1:exon:1964;Parent=Msa0099220-mRNA-1 |
| chr1_3 | exon | 5313917 | 5314041 | 5313917 | ID=Msa0099220-mRNA-1:exon:1963;Parent=Msa0099220-mRNA-1 |
| chr1_3 | exon | 5314130 | 5314192 | 5314130 | ID=Msa0099220-mRNA-1:exon:1962;Parent=Msa0099220-mRNA-1 |
| chr1_3 | exon | 5314813 | 5315043 | 5314813 | ID=Msa0099220-mRNA-1:exon:1961;Parent=Msa0099220-mRNA-1 |
| chr1_3 | exon | 5316140 | 5316190 | 5316140 | ID=Msa0099220-mRNA-1:exon:1960;Parent=Msa0099220-mRNA-1 |
| chr1_3 | exon | 5316290 | 5316361 | 5316290 | ID=Msa0099220-mRNA-1:exon:1959;Parent=Msa0099220-mRNA-1 |
| chr1_3 | exon | 5316532 | 5316639 | 5316532 | ID=Msa0099220-mRNA-1:exon:1958;Parent=Msa0099220-mRNA-1 |
| chr1_3 | exon | 5317276 | 5317380 | 5317276 | ID=Msa0099220-mRNA-1:exon:1957;Parent=Msa0099220-mRNA-1 |
| chr1_3 | exon | 5317858 | 5317884 | 5317858 | ID=Msa0099220-mRNA-1:exon:1956;Parent=Msa0099220-mRNA-1 |
| chr1_3 | exon | 5317983 | 5318033 | 5317983 | ID=Msa0099220-mRNA-1:exon:1955;Parent=Msa0099220-mRNA-1 |
| chr1_3 | exon | 5319585 | 5319646 | 5319585 | ID=Msa0099220-mRNA-1:exon:1954;Parent=Msa0099220-mRNA-1 |
| chr1_3 | exon | 5319741 | 5319935 | 5319741 | ID=Msa0099220-mRNA-1:exon:1953;Parent=Msa0099220-mRNA-1 |
| chr1_3 | five_prime_UTR | 5319741 | 5319935 | 5319741 | ID=Msa0099220-mRNA-1:five_prime_utr;Parent=Msa0099220-mRNA-1 |
| chr1_3 | five_prime_UTR | 5319585 | 5319646 | 5319585 | ID=Msa0099220-mRNA-1:five_prime_utr;Parent=Msa0099220-mRNA-1 |
| chr1_3 | five_prime_UTR | 5317983 | 5318033 | 5317983 | ID=Msa0099220-mRNA-1:five_prime_utr;Parent=Msa0099220-mRNA-1 |
| chr1_3 | five_prime_UTR | 5317858 | 5317884 | 5317858 | ID=Msa0099220-mRNA-1:five_prime_utr;Parent=Msa0099220-mRNA-1 |
| chr1_3 | five_prime_UTR | 5317276 | 5317380 | 5317276 | ID=Msa0099220-mRNA-1:five_prime_utr;Parent=Msa0099220-mRNA-1 |
| chr1_3 | five_prime_UTR | 5316532 | 5316639 | 5316532 | ID=Msa0099220-mRNA-1:five_prime_utr;Parent=Msa0099220-mRNA-1 |
| chr1_3 | five_prime_UTR | 5316290 | 5316361 | 5316290 | ID=Msa0099220-mRNA-1:five_prime_utr;Parent=Msa0099220-mRNA-1 |
| chr1_3 | five_prime_UTR | 5316140 | 5316190 | 5316140 | ID=Msa0099220-mRNA-1:five_prime_utr;Parent=Msa0099220-mRNA-1 |
| chr1_3 | five_prime_UTR | 5314813 | 5315043 | 5314813 | ID=Msa0099220-mRNA-1:five_prime_utr;Parent=Msa0099220-mRNA-1 |
| chr1_3 | five_prime_UTR | 5314130 | 5314192 | 5314130 | ID=Msa0099220-mRNA-1:five_prime_utr;Parent=Msa0099220-mRNA-1 |
| chr1_3 | five_prime_UTR | 5313925 | 5314041 | 5313925 | ID=Msa0099220-mRNA-1:five_prime_utr;Parent=Msa0099220-mRNA-1 |
| chr1_3 | CDS | 5313917 | 5313924 | 5313917 | ID=Msa0099220-mRNA-1:cds;Parent=Msa0099220-mRNA-1 |
| chr1_3 | CDS | 5313611 | 5313815 | 5313611 | ID=Msa0099220-mRNA-1:cds;Parent=Msa0099220-mRNA-1 |
| chr1_3 | CDS | 5312305 | 5313015 | 5312305 | ID=Msa0099220-mRNA-1:cds;Parent=Msa0099220-mRNA-1 |
| chr1_3 | three_prime_UTR | 5312029 | 5312304 | 5312029 | ID=Msa0099220-mRNA-1:three_prime_utr;Parent=Msa0099220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
