AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1312840


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1312840 MtrunA17_Chr8g0341321 95.495 444 8 1 1 432 139 582 0.0 871
Msa1312840 MtrunA17_Chr7g0222441 83.333 444 61 2 1 431 151 594 0.0 771
Msa1312840 MtrunA17_Chr7g0271531 51.487 437 190 3 1 425 172 598 1.13e-159 463
Msa1312840 MtrunA17_Chr8g0356781 91.111 225 15 1 213 432 1 225 1.57e-147 418
Msa1312840 MtrunA17_Chr7g0228611 47.856 443 191 7 1 420 74 499 3.98e-134 395
Msa1312840 MtrunA17_Chr6g0458971 47.619 441 195 6 1 420 77 502 6.82e-134 395
Msa1312840 MtrunA17_Chr8g0358431 86.000 200 16 1 78 265 6 205 6.75e-119 345
Msa1312840 MtrunA17_Chr8g0356771 78.767 146 17 1 78 209 6 151 1.91e-74 230
Msa1312840 MtrunA17_Chr8g0358411 96.907 97 3 0 336 432 1 97 8.07e-61 192
Msa1312840 MtrunA17_Chr8g0356701 85.714 105 3 1 190 282 1 105 3.74e-56 181
Msa1312840 MtrunA17_Chr4g0044781 78.947 76 13 1 277 349 4 79 1.88e-34 123
Msa1312840 MtrunA17_Chr8g0356711 90.625 32 3 0 28 59 1 32 8.05e-14 65.5
Msa1312840 MtrunA17_Chr8g0356761 90.625 32 3 0 28 59 1 32 1.16e-13 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1312840 AT5G35790.1 83.673 441 60 1 1 429 134 574 0.0 776
Msa1312840 AT5G13110.1 81.716 443 69 1 1 431 153 595 0.0 769
Msa1312840 AT1G24280.1 81.716 443 69 1 1 431 156 598 0.0 763
Msa1312840 AT1G09420.1 52.392 439 186 3 1 427 197 624 8.53e-163 473
Msa1312840 AT1G09420.2 50.780 449 188 3 1 427 197 634 4.03e-160 466
Msa1312840 AT3G27300.1 47.856 443 190 8 1 420 76 500 2.83e-134 396
Msa1312840 AT3G27300.3 47.856 443 190 8 1 420 76 500 2.83e-134 396
Msa1312840 AT3G27300.2 47.856 443 190 8 1 420 76 500 2.83e-134 396
Msa1312840 AT3G27300.5 47.856 443 190 8 1 420 130 554 3.40e-133 395
Msa1312840 AT3G27300.4 47.856 443 190 8 1 420 147 571 4.58e-133 395
Msa1312840 AT5G40760.2 47.166 441 195 7 1 420 76 499 4.31e-132 390
Msa1312840 AT5G40760.1 47.166 441 195 7 1 420 76 499 4.31e-132 390

Find 130 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGCAGCAGCTTTGTTTAT+TGG 0.152319 8_4:+10126291 Msa1312840:CDS
CAGCCAAACCTGCATAAATA+TGG 0.216239 8_4:-10123375 None:intergenic
AAGAAGTGCAATGTGATTAT+TGG 0.226175 8_4:-10123189 None:intergenic
TTGAGGCTGGCCATCTTCTT+TGG 0.226294 8_4:-10123410 None:intergenic
TAACTCTTCATCAGTCATTT+TGG 0.241437 8_4:-10123732 None:intergenic
AATTTCGTATTTAATCTTAT+AGG 0.262171 8_4:+10127223 Msa1312840:three_prime_UTR
TGAGGAAGACTTTGTTGATT+TGG 0.264733 8_4:+10124299 Msa1312840:CDS
GGCAAATTGTGCAGATAAAA+TGG 0.274667 8_4:+10124230 Msa1312840:CDS
ACGGAACTTTGGAACTGATT+TGG 0.280847 8_4:+10126531 Msa1312840:CDS
TAAGGCTTTGTTTGCGAGTT+TGG 0.284348 8_4:-10123159 None:intergenic
GCTCCAGAGCTTTATCCTTA+TGG 0.285277 8_4:+10127080 Msa1312840:CDS
TGTTGTAGTTGGTCAATATA+AGG 0.308938 8_4:+10126188 Msa1312840:CDS
TCGGTATCCTCTTCAAATTT+AGG 0.324260 8_4:-10127395 None:intergenic
ATAACTGTTGTTGGAGCATC+TGG 0.335491 8_4:+10123490 Msa1312840:five_prime_UTR
TTCCCATATTTATGCAGGTT+TGG 0.346066 8_4:+10123372 Msa1312840:five_prime_UTR
TTTAGTATGAAGAGCCTTGC+CGG 0.364758 8_4:-10126352 None:intergenic
ATGATCTACCACCCTTACTA+TGG 0.365491 8_4:-10126212 None:intergenic
CATATTTATGCAGGTTTGGC+TGG 0.370810 8_4:+10123376 Msa1312840:five_prime_UTR
GCACATTACGAATGTAATTC+CGG 0.371488 8_4:-10125320 None:intergenic
GTGATTATTGGAATTTGTTA+AGG 0.379685 8_4:-10123177 None:intergenic
AACCTTAGTATAACTGTTGT+TGG 0.383313 8_4:+10123481 Msa1312840:five_prime_UTR
TCACTGAAGACCAAATATTC+AGG 0.389621 8_4:+10125121 Msa1312840:CDS
TCAATTTGCTTTACAGATCA+AGG 0.391505 8_4:+10126662 Msa1312840:CDS
TTCAAATATATAGCTTCATC+AGG 0.412110 8_4:-10126589 None:intergenic
ATCTAGGATTGACCATTACT+TGG 0.416457 8_4:+10125230 Msa1312840:intron
AATGTAAGATGGGGAGATCT+TGG 0.420091 8_4:+10127146 Msa1312840:CDS
AAGATCAACAACAAAGTTCC+CGG 0.423441 8_4:+10126610 Msa1312840:CDS
AACTTGTACAAACGGAACTT+TGG 0.426963 8_4:+10126520 Msa1312840:CDS
CAATTCTGCATGTTAAAGTC+TGG 0.435685 8_4:-10123769 None:intergenic
CACATTACGAATGTAATTCC+GGG 0.437682 8_4:-10125319 None:intergenic
CTTGTCGTGCTTTGAGTTTG+AGG 0.439645 8_4:+10127333 Msa1312840:three_prime_UTR
AACAACAAAGTTCCCGGTCT+GGG 0.442025 8_4:+10126616 Msa1312840:CDS
AAAAGGAACTCCGTCCCATC+TGG 0.444008 8_4:-10126319 None:intergenic
TAAATGAGTCAGCAACATAT+AGG 0.446519 8_4:-10123256 None:intergenic
ACAACATCTTCAAGCTGTAT+TGG 0.447906 8_4:-10126171 None:intergenic
TTGTCGTGCTTTGAGTTTGA+GGG 0.447949 8_4:+10127334 Msa1312840:three_prime_UTR
TCAATATAAGGGCCATAGTA+AGG 0.449351 8_4:+10126200 Msa1312840:CDS
GAAGGAAAGGAAAGGCTTTG+AGG 0.451246 8_4:-10123132 None:intergenic
AAGGAAAGGAAAGGCTTTGA+GGG 0.452977 8_4:-10123131 None:intergenic
ATCCTTCAACTTGTTGAGGC+TGG 0.454958 8_4:-10123423 None:intergenic
AGGTTTGGCTGGAAGTTCAT+TGG 0.463156 8_4:+10123387 Msa1312840:five_prime_UTR
CAACAACAAAGTTCCCGGTC+TGG 0.463693 8_4:+10126615 Msa1312840:CDS
ATATATTCCCATATTTATGC+AGG 0.469407 8_4:+10123367 Msa1312840:five_prime_UTR
CAGCTTGAAGATGTTGTAGT+TGG 0.469962 8_4:+10126177 Msa1312840:CDS
TTGCCGGCTTTCATGAGAAA+AGG 0.471889 8_4:-10126336 None:intergenic
AGTAACCTCTCATAAGCATC+TGG 0.472716 8_4:-10126948 None:intergenic
AGGGTGGAAGACTTTCAAAC+AGG 0.474682 8_4:+10124935 Msa1312840:intron
CTCAAAGCTTCTTCAAAAGA+TGG 0.478991 8_4:+10125015 Msa1312840:CDS
GTTGTAGTTGGTCAATATAA+GGG 0.483031 8_4:+10126189 Msa1312840:CDS
GCAAGGCTCTTCATACTAAA+GGG 0.484139 8_4:+10126355 Msa1312840:CDS
GCAAGGTAGTGTGCTCCAAC+CGG 0.486004 8_4:-10127113 None:intergenic
AAGCTTCTTCAAAAGATGGC+TGG 0.488825 8_4:+10125019 Msa1312840:CDS
AGCCAAACCTGCATAAATAT+GGG 0.490144 8_4:-10123374 None:intergenic
TTACTCTTAGATGCTATTGA+AGG 0.490353 8_4:+10126966 Msa1312840:CDS
CTGCAAGGCACAATGTAAGA+TGG 0.490589 8_4:+10127135 Msa1312840:CDS
TCCTTATGGTAGCAGAGGAC+CGG 0.492156 8_4:+10127094 Msa1312840:CDS
GGCTTTGTTTGCGAGTTTGG+AGG 0.492433 8_4:-10123156 None:intergenic
AAATGACTGATGAAGAGTTA+AGG 0.494086 8_4:+10123735 Msa1312840:exon
GTCTAATCTCATTCCCAGAC+CGG 0.494248 8_4:-10126629 None:intergenic
TTTGGAACAGAAGGAAGAGG+AGG 0.498068 8_4:+10125363 Msa1312840:CDS
GATTGACCATTACTTGGGTA+AGG 0.498567 8_4:+10125236 Msa1312840:CDS
GGCAAGGCTCTTCATACTAA+AGG 0.499944 8_4:+10126354 Msa1312840:CDS
TGATGAACTTGATGCAGCTT+GGG 0.500194 8_4:+10127013 Msa1312840:CDS
AACAACAGTTATACTAAGGT+TGG 0.501460 8_4:-10123479 None:intergenic
TCCCGGGTAACTTGTACAAA+CGG 0.503195 8_4:+10126512 Msa1312840:CDS
CTACCATAAGGATAAAGCTC+TGG 0.504022 8_4:-10127083 None:intergenic
TTCTTCTTACAACGAATAGT+AGG 0.505845 8_4:-10127262 None:intergenic
GCTTTGTTTGCGAGTTTGGA+GGG 0.506535 8_4:-10123155 None:intergenic
TGTTTATTGGCAATGCCAGA+TGG 0.507375 8_4:+10126304 Msa1312840:CDS
TAGAAAAGAGCAAAGAGTGC+TGG 0.507946 8_4:-10123538 None:intergenic
ACCGGTCCTCTGCTACCATA+AGG 0.508912 8_4:-10127095 None:intergenic
AAAGCTGCTGCAGCAAATGT+TGG 0.510413 8_4:-10126282 None:intergenic
CGAGTTTGGAGGGGAAGGAA+AGG 0.510708 8_4:-10123145 None:intergenic
GTTGGAGTAAGACTACCCTT+TGG 0.511466 8_4:-10126264 None:intergenic
CTCCAACAACAGTTATACTA+AGG 0.511684 8_4:-10123483 None:intergenic
AACAATCCTTCAACTTGTTG+AGG 0.519106 8_4:-10123427 None:intergenic
GTAATTGTGGAAAAGCCGTT+TGG 0.520601 8_4:+10125048 Msa1312840:CDS
TGCAAGGCACAATGTAAGAT+GGG 0.522203 8_4:+10127136 Msa1312840:CDS
AGTACAATTCAGACACGTCC+CGG 0.522414 8_4:+10126495 Msa1312840:CDS
TTCCGTTTGTACAAGTTACC+CGG 0.525861 8_4:-10126514 None:intergenic
AGTTCATTGGCCAAAGAAGA+TGG 0.530998 8_4:+10123400 Msa1312840:five_prime_UTR
CTTCAAAAGATGGCTGGACA+AGG 0.534266 8_4:+10125025 Msa1312840:CDS
TGCTTATTCATAAGACGGCT+CGG 0.534704 8_4:-10127189 None:intergenic
AATACTAGCATTGTTTGCAA+TGG 0.536390 8_4:+10125529 Msa1312840:CDS
TTTGAGGGATGCAAAATATG+AGG 0.537047 8_4:-10123116 None:intergenic
GACGACTCAGCTGTTCCAAA+GGG 0.539978 8_4:+10126249 Msa1312840:CDS
TATACTAAGGTTGGATCCTG+TGG 0.540104 8_4:-10123470 None:intergenic
GTGATGAACTTGATGCAGCT+TGG 0.541622 8_4:+10127012 Msa1312840:CDS
TTGGAACAGAAGGAAGAGGA+GGG 0.541853 8_4:+10125364 Msa1312840:CDS
GGCCAGCCTCAACAAGTTGA+AGG 0.543781 8_4:+10123421 Msa1312840:five_prime_UTR
GTTTGCGAGTTTGGAGGGGA+AGG 0.552320 8_4:-10123150 None:intergenic
TTGATCTGTAAAGCAAATTG+AGG 0.554554 8_4:-10126660 None:intergenic
GCTGAGTCGTCAATATAAGC+AGG 0.554556 8_4:-10126237 None:intergenic
GATTCAGAATCACGACCAAA+CGG 0.555224 8_4:-10125063 None:intergenic
ATTGGCAATGCCAGATGGGA+CGG 0.560037 8_4:+10126309 Msa1312840:CDS
GTTTATTGGCAATGCCAGAT+GGG 0.561981 8_4:+10126305 Msa1312840:CDS
ATCTATACCTAAATTTGAAG+AGG 0.564077 8_4:+10127388 Msa1312840:three_prime_UTR
TTATTGTGTTTGGATATGCT+CGG 0.565032 8_4:+10123708 Msa1312840:five_prime_UTR
CTTTGTTTGCGAGTTTGGAG+GGG 0.570684 8_4:-10123154 None:intergenic
ATTTCTTGTTAGCTCACTAG+AGG 0.573200 8_4:-10125085 None:intergenic
CAATATAAGGGCCATAGTAA+GGG 0.573262 8_4:+10126201 Msa1312840:CDS
CAAGCTCCTTACCCAAGTAA+TGG 0.574742 8_4:-10125242 None:intergenic
GTATATGCTTATTCATAAGA+CGG 0.575253 8_4:-10127194 None:intergenic
TCTAGGATTGACCATTACTT+GGG 0.576872 8_4:+10125231 Msa1312840:intron
TTGTCAGACTCTGAATCCAC+AGG 0.580920 8_4:+10123454 Msa1312840:five_prime_UTR
TGGCTGGACAAGGGTAATTG+TGG 0.581549 8_4:+10125035 Msa1312840:CDS
TGACGACTCAGCTGTTCCAA+AGG 0.585585 8_4:+10126248 Msa1312840:CDS
TTACTTGGGTAAGGAGCTTG+TGG 0.586659 8_4:+10125245 Msa1312840:CDS
TCTAATCTCATTCCCAGACC+GGG 0.589676 8_4:-10126628 None:intergenic
CTTTATCCTTATGGTAGCAG+AGG 0.592020 8_4:+10127089 Msa1312840:CDS
TTGGAGGGGAAGGAAAGGAA+AGG 0.596169 8_4:-10123140 None:intergenic
ATGTAATTCCGGGACCATAG+AGG 0.600511 8_4:-10125309 None:intergenic
GTAAGATGGGGAGATCTTGG+TGG 0.604005 8_4:+10127149 Msa1312840:CDS
CTATGAAGATTGGTTACCCG+AGG 0.607456 8_4:+10123558 Msa1312840:five_prime_UTR
TATGGTAGCAGAGGACCGGT+TGG 0.609997 8_4:+10127098 Msa1312840:CDS
TAACATGCAGAATTGACAAG+AGG 0.611745 8_4:+10123777 Msa1312840:CDS
CTCAAAGCACGACAAGTGCA+AGG 0.618089 8_4:-10127326 None:intergenic
CAGAGTTGTACAGACCAGAA+TGG 0.623697 8_4:-10124278 None:intergenic
TCCGTTTGTACAAGTTACCC+GGG 0.629522 8_4:-10126513 None:intergenic
GTACAATTCAGACACGTCCC+GGG 0.638266 8_4:+10126496 Msa1312840:CDS
TATAAGGGCCATAGTAAGGG+TGG 0.639145 8_4:+10126204 Msa1312840:CDS
TTACATTGTGCCTTGCAGCA+AGG 0.639647 8_4:-10127130 None:intergenic
TTCAAAAGATGGCTGGACAA+GGG 0.640628 8_4:+10125026 Msa1312840:CDS
ATGCTATTGAAGGCGAACGA+AGG 0.640967 8_4:+10126976 Msa1312840:CDS
TGAATATTTGGTCTTCAGTG+AGG 0.651063 8_4:-10125119 None:intergenic
GAGCACACTACCTTGCTGCA+AGG 0.657046 8_4:+10127120 Msa1312840:CDS
ACAATGCTAGTATTTGTACA+AGG 0.657097 8_4:-10125520 None:intergenic
GCAAGGCACAATGTAAGATG+GGG 0.666128 8_4:+10127137 Msa1312840:CDS
AAATACCAGATGCTTATGAG+AGG 0.672774 8_4:+10126943 Msa1312840:CDS
TTCTGGTCTGTACAACTCTG+AGG 0.704995 8_4:+10124281 Msa1312840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGAAAAATTAATAGATAAT+TGG + chr8_4:10124057-10124076 Msa1312840:intron 10.0%
!! TTTATGATATTAAAGAAAAA+TGG + chr8_4:10125412-10125431 Msa1312840:intron 10.0%
!!! ATACATATTTTGTTTTTGTT+GGG + chr8_4:10124629-10124648 Msa1312840:intron 15.0%
!! AAAAAATAAACCTGAATATT+TGG - chr8_4:10125134-10125153 None:intergenic 15.0%
!!! TTTAGTTATTTTGATAACTA+CGG + chr8_4:10125470-10125489 Msa1312840:intron 15.0%
!! AATTTCGTATTTAATCTTAT+AGG + chr8_4:10127223-10127242 Msa1312840:three_prime_UTR 15.0%
!! ACTTGAAAAAGTTTAAATTA+AGG - chr8_4:10127454-10127473 None:intergenic 15.0%
!!! AAGTCTATTTTTGTTTTGTT+CGG + chr8_4:10123216-10123235 Msa1312840:five_prime_UTR 20.0%
!! CAGCAAAAAAAAAAAATGTT+TGG + chr8_4:10123328-10123347 Msa1312840:five_prime_UTR 20.0%
!! AAAAAAAATGTTTGGCTAAA+AGG + chr8_4:10123336-10123355 Msa1312840:five_prime_UTR 20.0%
!! CTGTATATGATTTAAATGTT+TGG + chr8_4:10123640-10123659 Msa1312840:intron 20.0%
!! GGATAATGAATATTACAATT+TGG - chr8_4:10123947-10123966 None:intergenic 20.0%
!! CTTACTAATGACTTAAAAAA+AGG - chr8_4:10124107-10124126 None:intergenic 20.0%
!! TTATTGTTTAGTGTTATCTT+AGG - chr8_4:10124426-10124445 None:intergenic 20.0%
!! TTGAAAGAATATTACATACA+GGG - chr8_4:10124467-10124486 None:intergenic 20.0%
!! TTTGAAAGAATATTACATAC+AGG - chr8_4:10124468-10124487 None:intergenic 20.0%
!!! TATGTCGATTTTTTAGAATA+AGG + chr8_4:10124499-10124518 Msa1312840:intron 20.0%
!! GATAATATGTAAATCAAAAC+TGG + chr8_4:10124544-10124563 Msa1312840:intron 20.0%
!!! GATACATATTTTGTTTTTGT+TGG + chr8_4:10124628-10124647 Msa1312840:intron 20.0%
!! TCTAAACTTGATTAATAGAA+AGG + chr8_4:10124762-10124781 Msa1312840:intron 20.0%
!!! CTAATATTTTCTGAAGATTT+TGG + chr8_4:10125345-10125364 Msa1312840:CDS 20.0%
!! TTAATCTTAACAAATCATCA+TGG + chr8_4:10126091-10126110 Msa1312840:intron 20.0%
!!! TGAAAATAGTTTTTTAACTC+AGG + chr8_4:10126125-10126144 Msa1312840:intron 20.0%
!! AAAGACAAAAAGATTAACAA+GGG - chr8_4:10126833-10126852 None:intergenic 20.0%
!!! GAACATAAAATAACATGTTT+TGG + chr8_4:10126888-10126907 Msa1312840:intron 20.0%
!!! TTTTCAATTTCTTTTAGCAA+AGG - chr8_4:10127050-10127069 None:intergenic 20.0%
!! AAAATTGTGATACAAAAAGT+CGG - chr8_4:10127417-10127436 None:intergenic 20.0%
! ATGCAAAATATGAGGAAAAA+TGG - chr8_4:10123111-10123130 None:intergenic 25.0%
!!! GTGATTATTGGAATTTGTTA+AGG - chr8_4:10123180-10123199 None:intergenic 25.0%
! ATATATTCCCATATTTATGC+AGG + chr8_4:10123367-10123386 Msa1312840:five_prime_UTR 25.0%
!! ATGCAGAATTTTATTGTGTT+TGG + chr8_4:10123698-10123717 Msa1312840:intron 25.0%
! GTTATAGTAGCAATTCTATT+TGG + chr8_4:10123805-10123824 Msa1312840:intron 25.0%
! TTGTACAAAAGTTGCTAAAA+AGG + chr8_4:10123839-10123858 Msa1312840:intron 25.0%
! TAACTATTCATGATAGTAGA+GGG + chr8_4:10123870-10123889 Msa1312840:intron 25.0%
!!! ATTTCAGGTTTGAAAATAAG+AGG + chr8_4:10123900-10123919 Msa1312840:intron 25.0%
! ATTGATCACATATTTGAACT+CGG + chr8_4:10123981-10124000 Msa1312840:intron 25.0%
! ATCAAATTTCGACATCAATT+TGG - chr8_4:10124010-10124029 None:intergenic 25.0%
!! TCACATTTTTCATGTTATTG+TGG + chr8_4:10124143-10124162 Msa1312840:intron 25.0%
!! ATGAGTTCTTTTGAATTGTA+GGG + chr8_4:10124209-10124228 Msa1312840:intron 25.0%
!! AATATTCTTTCAAAAAGTGC+TGG + chr8_4:10124474-10124493 Msa1312840:intron 25.0%
! CTATTATCAACACAAAAACT+AGG + chr8_4:10124583-10124602 Msa1312840:intron 25.0%
!!! TATTTTGTTTTTGTTGGGTA+TGG + chr8_4:10124634-10124653 Msa1312840:intron 25.0%
! TCGTGCTTAATTAAATACTA+CGG - chr8_4:10124726-10124745 None:intergenic 25.0%
! TGATATTTGATCATGTAGTT+CGG - chr8_4:10124829-10124848 None:intergenic 25.0%
!!! AACTTTTAGAACAACAATGT+TGG - chr8_4:10124893-10124912 None:intergenic 25.0%
! TGTGTTATGATCGATATTAT+CGG + chr8_4:10125619-10125638 Msa1312840:intron 25.0%
! ATAGCTTATGAACAGATTTA+TGG + chr8_4:10125868-10125887 Msa1312840:intron 25.0%
! TTAATTAAGCTTTGCTTCTA+GGG + chr8_4:10126021-10126040 Msa1312840:intron 25.0%
!! GGTCTAACAAAATTTTCAAT+CGG + chr8_4:10126052-10126071 Msa1312840:intron 25.0%
! AAGATTAAACGACATTTACA+AGG - chr8_4:10126079-10126098 None:intergenic 25.0%
! TTCAAATATATAGCTTCATC+AGG - chr8_4:10126592-10126611 None:intergenic 25.0%
!!! ATTAAGTCTTGTTAATTCAG+TGG + chr8_4:10126686-10126705 Msa1312840:intron 25.0%
! CAAAGACAAAAAGATTAACA+AGG - chr8_4:10126834-10126853 None:intergenic 25.0%
! GTATATGCTTATTCATAAGA+CGG - chr8_4:10127197-10127216 None:intergenic 25.0%
! ATCTATACCTAAATTTGAAG+AGG + chr8_4:10127388-10127407 Msa1312840:three_prime_UTR 25.0%
! AAGAAGTGCAATGTGATTAT+TGG - chr8_4:10123192-10123211 None:intergenic 30.0%
TAAATGAGTCAGCAACATAT+AGG - chr8_4:10123259-10123278 None:intergenic 30.0%
AACAACAGTTATACTAAGGT+TGG - chr8_4:10123482-10123501 None:intergenic 30.0%
AACCTTAGTATAACTGTTGT+TGG + chr8_4:10123481-10123500 Msa1312840:five_prime_UTR 30.0%
!! GAAAAATCTTCTTTTTGGCA+AGG - chr8_4:10123519-10123538 None:intergenic 30.0%
! TGCTGGAAAAATCTTCTTTT+TGG - chr8_4:10123524-10123543 None:intergenic 30.0%
! TTGCTCTTTTCTATGAAGAT+TGG + chr8_4:10123548-10123567 Msa1312840:five_prime_UTR 30.0%
! TGTTTGGAACATTATATCTG+AGG + chr8_4:10123656-10123675 Msa1312840:intron 30.0%
TTATTGTGTTTGGATATGCT+CGG + chr8_4:10123708-10123727 Msa1312840:five_prime_UTR 30.0%
! TAACTCTTCATCAGTCATTT+TGG - chr8_4:10123735-10123754 None:intergenic 30.0%
AAATGACTGATGAAGAGTTA+AGG + chr8_4:10123735-10123754 Msa1312840:exon 30.0%
CTAACTATTCATGATAGTAG+AGG + chr8_4:10123869-10123888 Msa1312840:intron 30.0%
AAGTCATTAGTAAGACTCAT+CGG + chr8_4:10124113-10124132 Msa1312840:intron 30.0%
! ATTTTTCATGTTATTGTGGC+AGG + chr8_4:10124147-10124166 Msa1312840:intron 30.0%
TAGGGGAAATGTAAGAAAAA+AGG - chr8_4:10124184-10124203 None:intergenic 30.0%
AAAAGAACTCATCAGTATAG+GGG - chr8_4:10124201-10124220 None:intergenic 30.0%
CAAAAGAACTCATCAGTATA+GGG - chr8_4:10124202-10124221 None:intergenic 30.0%
TCAAAAGAACTCATCAGTAT+AGG - chr8_4:10124203-10124222 None:intergenic 30.0%
! GATGAGTTCTTTTGAATTGT+AGG + chr8_4:10124208-10124227 Msa1312840:intron 30.0%
! AAAAGATGCTTTTACCATTC+TGG + chr8_4:10124264-10124283 Msa1312840:CDS 30.0%
TTCCAAGCTAAAAAAGAAAG+AGG + chr8_4:10124323-10124342 Msa1312840:CDS 30.0%
!!! TACCTCTTTCTTTTTTAGCT+TGG - chr8_4:10124328-10124347 None:intergenic 30.0%
GCTCATAGTTTCTTAATAAG+TGG + chr8_4:10124656-10124675 Msa1312840:intron 30.0%
CTAAAAGTTTCACTTGACAA+TGG + chr8_4:10124904-10124923 Msa1312840:intron 30.0%
! AATACCTCCAAACATTTTTG+TGG + chr8_4:10124972-10124991 Msa1312840:CDS 30.0%
ACAATGCTAGTATTTGTACA+AGG - chr8_4:10125523-10125542 None:intergenic 30.0%
AATACTAGCATTGTTTGCAA+TGG + chr8_4:10125529-10125548 Msa1312840:CDS 30.0%
GTGTTATGATCGATATTATC+GGG + chr8_4:10125620-10125639 Msa1312840:intron 30.0%
AATCCAAACAGACTCTAATT+CGG - chr8_4:10125729-10125748 None:intergenic 30.0%
AACAGACTCACATGTATTTA+TGG - chr8_4:10125775-10125794 None:intergenic 30.0%
CAAAGCTTAATTAAGGACTA+AGG - chr8_4:10126015-10126034 None:intergenic 30.0%
CTAGAAGCAAAGCTTAATTA+AGG - chr8_4:10126022-10126041 None:intergenic 30.0%
CTTAATTAAGCTTTGCTTCT+AGG + chr8_4:10126020-10126039 Msa1312840:intron 30.0%
!!! TAGTTTTTTAACTCAGGTGA+AGG + chr8_4:10126131-10126150 Msa1312840:intron 30.0%
TGTTGTAGTTGGTCAATATA+AGG + chr8_4:10126188-10126207 Msa1312840:CDS 30.0%
GTTGTAGTTGGTCAATATAA+GGG + chr8_4:10126189-10126208 Msa1312840:CDS 30.0%
!! TGAATTAGCTTTGCATTCTT+TGG + chr8_4:10126418-10126437 Msa1312840:intron 30.0%
TTGATCTGTAAAGCAAATTG+AGG - chr8_4:10126663-10126682 None:intergenic 30.0%
! TCAATTTGCTTTACAGATCA+AGG + chr8_4:10126662-10126681 Msa1312840:CDS 30.0%
TTACTCTTAGATGCTATTGA+AGG + chr8_4:10126966-10126985 Msa1312840:CDS 30.0%
TTCTTCTTACAACGAATAGT+AGG - chr8_4:10127265-10127284 None:intergenic 30.0%
TTTGAGGGATGCAAAATATG+AGG - chr8_4:10123119-10123138 None:intergenic 35.0%
TTCCCATATTTATGCAGGTT+TGG + chr8_4:10123372-10123391 Msa1312840:five_prime_UTR 35.0%
AGCCAAACCTGCATAAATAT+GGG - chr8_4:10123377-10123396 None:intergenic 35.0%
!! AACAATCCTTCAACTTGTTG+AGG - chr8_4:10123430-10123449 None:intergenic 35.0%
CTCCAACAACAGTTATACTA+AGG - chr8_4:10123486-10123505 None:intergenic 35.0%
CAATTCTGCATGTTAAAGTC+TGG - chr8_4:10123772-10123791 None:intergenic 35.0%
TAACATGCAGAATTGACAAG+AGG + chr8_4:10123777-10123796 Msa1312840:CDS 35.0%
GTAGAGGGAAAAAAGATTTC+AGG + chr8_4:10123885-10123904 Msa1312840:intron 35.0%
GATCAATCATGTTCAGTAGA+TGG - chr8_4:10123968-10123987 None:intergenic 35.0%
GGCAAATTGTGCAGATAAAA+TGG + chr8_4:10124230-10124249 Msa1312840:CDS 35.0%
! TGAGGAAGACTTTGTTGATT+TGG + chr8_4:10124299-10124318 Msa1312840:CDS 35.0%
TATGTATCAAGACCAATGCT+CGG - chr8_4:10124616-10124635 None:intergenic 35.0%
AATATCATGTGCTCTCTCAT+TGG + chr8_4:10124842-10124861 Msa1312840:intron 35.0%
ACTTGACAATGGTCTCTTAT+AGG + chr8_4:10124915-10124934 Msa1312840:intron 35.0%
CTTGACAATGGTCTCTTATA+GGG + chr8_4:10124916-10124935 Msa1312840:intron 35.0%
ACATCCACAAAAATGTTTGG+AGG - chr8_4:10124979-10124998 None:intergenic 35.0%
! TCCAAACATTTTTGTGGATG+TGG + chr8_4:10124978-10124997 Msa1312840:CDS 35.0%
ACCACATCCACAAAAATGTT+TGG - chr8_4:10124982-10125001 None:intergenic 35.0%
!! CATCTTTTGAAGAAGCTTTG+AGG - chr8_4:10125017-10125036 None:intergenic 35.0%
CTCAAAGCTTCTTCAAAAGA+TGG + chr8_4:10125015-10125034 Msa1312840:CDS 35.0%
ATTTCTTGTTAGCTCACTAG+AGG - chr8_4:10125088-10125107 None:intergenic 35.0%
! TGAATATTTGGTCTTCAGTG+AGG - chr8_4:10125122-10125141 None:intergenic 35.0%
TCACTGAAGACCAAATATTC+AGG + chr8_4:10125121-10125140 Msa1312840:CDS 35.0%
AACAAGCTAGAGAAGAAAGT+TGG + chr8_4:10125185-10125204 Msa1312840:intron 35.0%
!! TTGAAACTCGTTTGCTATCT+AGG + chr8_4:10125214-10125233 Msa1312840:intron 35.0%
! ATCTAGGATTGACCATTACT+TGG + chr8_4:10125230-10125249 Msa1312840:intron 35.0%
! TCTAGGATTGACCATTACTT+GGG + chr8_4:10125231-10125250 Msa1312840:intron 35.0%
!!! ATCTTGTTTTTGAGCCTCTA+TGG + chr8_4:10125295-10125314 Msa1312840:CDS 35.0%
CACATTACGAATGTAATTCC+GGG - chr8_4:10125322-10125341 None:intergenic 35.0%
GCACATTACGAATGTAATTC+CGG - chr8_4:10125323-10125342 None:intergenic 35.0%
!!! TCTGAAGATTTTGGAACAGA+AGG + chr8_4:10125354-10125373 Msa1312840:CDS 35.0%
! ATGAGAAGGTATATCTCTTC+CGG + chr8_4:10125588-10125607 Msa1312840:intron 35.0%
ATCATAACACAACTGATAGC+CGG - chr8_4:10125610-10125629 None:intergenic 35.0%
ATGTCCAATCTTGGACATAA+TGG + chr8_4:10125668-10125687 Msa1312840:intron 35.0%
TGTCCAATCTTGGACATAAT+GGG + chr8_4:10125669-10125688 Msa1312840:intron 35.0%
AATCCCATTATGTCCAAGAT+TGG - chr8_4:10125675-10125694 None:intergenic 35.0%
AATCTGTTCATAAGCTATCC+TGG - chr8_4:10125866-10125885 None:intergenic 35.0%
ACAACATCTTCAAGCTGTAT+TGG - chr8_4:10126174-10126193 None:intergenic 35.0%
TCAATATAAGGGCCATAGTA+AGG + chr8_4:10126200-10126219 Msa1312840:CDS 35.0%
CAATATAAGGGCCATAGTAA+GGG + chr8_4:10126201-10126220 Msa1312840:CDS 35.0%
! CACTGATACATTTTTGTGTG+TGG - chr8_4:10126465-10126484 None:intergenic 35.0%
AACTTGTACAAACGGAACTT+TGG + chr8_4:10126520-10126539 Msa1312840:CDS 35.0%
AAGATCAACAACAAAGTTCC+CGG + chr8_4:10126610-10126629 Msa1312840:CDS 35.0%
TTGTTAATTCAGTGGAAGCA+AGG + chr8_4:10126694-10126713 Msa1312840:intron 35.0%
ATGTTACACTTACTGCTACA+TGG + chr8_4:10126774-10126793 Msa1312840:intron 35.0%
GTGACTTTCAATTTCTGTGA+AGG + chr8_4:10126910-10126929 Msa1312840:intron 35.0%
AAATACCAGATGCTTATGAG+AGG + chr8_4:10126943-10126962 Msa1312840:CDS 35.0%
TCGGTATCCTCTTCAAATTT+AGG - chr8_4:10127398-10127417 None:intergenic 35.0%
! AAGGAAAGGAAAGGCTTTGA+GGG - chr8_4:10123134-10123153 None:intergenic 40.0%
!! TAAGGCTTTGTTTGCGAGTT+TGG - chr8_4:10123162-10123181 None:intergenic 40.0%
CAGCCAAACCTGCATAAATA+TGG - chr8_4:10123378-10123397 None:intergenic 40.0%
CATATTTATGCAGGTTTGGC+TGG + chr8_4:10123376-10123395 Msa1312840:five_prime_UTR 40.0%
AGTTCATTGGCCAAAGAAGA+TGG + chr8_4:10123400-10123419 Msa1312840:five_prime_UTR 40.0%
TATACTAAGGTTGGATCCTG+TGG - chr8_4:10123473-10123492 None:intergenic 40.0%
! ATAACTGTTGTTGGAGCATC+TGG + chr8_4:10123490-10123509 Msa1312840:five_prime_UTR 40.0%
! TAGAAAAGAGCAAAGAGTGC+TGG - chr8_4:10123541-10123560 None:intergenic 40.0%
TACTATCACAGTTCAGACCT+CGG - chr8_4:10123578-10123597 None:intergenic 40.0%
ATGTATCAAGACCAATGCTC+GGG - chr8_4:10124615-10124634 None:intergenic 40.0%
TATTGCAACTGTTCTGCAGT+TGG + chr8_4:10124785-10124804 Msa1312840:intron 40.0%
AAGCTTCTTCAAAAGATGGC+TGG + chr8_4:10125019-10125038 Msa1312840:CDS 40.0%
TTCAAAAGATGGCTGGACAA+GGG + chr8_4:10125026-10125045 Msa1312840:CDS 40.0%
GTAATTGTGGAAAAGCCGTT+TGG + chr8_4:10125048-10125067 Msa1312840:CDS 40.0%
GATTCAGAATCACGACCAAA+CGG - chr8_4:10125066-10125085 None:intergenic 40.0%
GATTGACCATTACTTGGGTA+AGG + chr8_4:10125236-10125255 Msa1312840:CDS 40.0%
!!! GATTTTGGAACAGAAGGAAG+AGG + chr8_4:10125360-10125379 Msa1312840:CDS 40.0%
TGAGGACATCAGAAATGAGA+AGG + chr8_4:10125574-10125593 Msa1312840:intron 40.0%
! TCTGAAGCGTGGATAATTAC+AGG - chr8_4:10125649-10125668 None:intergenic 40.0%
TGACCGAATTAGAGTCTGTT+TGG + chr8_4:10125723-10125742 Msa1312840:intron 40.0%
!! TTTGCTTCTAGGGTTGAAGT+AGG + chr8_4:10126031-10126050 Msa1312840:intron 40.0%
CAGCTTGAAGATGTTGTAGT+TGG + chr8_4:10126177-10126196 Msa1312840:CDS 40.0%
ATGATCTACCACCCTTACTA+TGG - chr8_4:10126215-10126234 None:intergenic 40.0%
TGTTTATTGGCAATGCCAGA+TGG + chr8_4:10126304-10126323 Msa1312840:CDS 40.0%
GTTTATTGGCAATGCCAGAT+GGG + chr8_4:10126305-10126324 Msa1312840:CDS 40.0%
! GTTCCTTTTCTCATGAAAGC+CGG + chr8_4:10126333-10126352 Msa1312840:CDS 40.0%
TTTAGTATGAAGAGCCTTGC+CGG - chr8_4:10126355-10126374 None:intergenic 40.0%
GCAAGGCTCTTCATACTAAA+GGG + chr8_4:10126355-10126374 Msa1312840:CDS 40.0%
TTCCGTTTGTACAAGTTACC+CGG - chr8_4:10126517-10126536 None:intergenic 40.0%
!! ACGGAACTTTGGAACTGATT+TGG + chr8_4:10126531-10126550 Msa1312840:CDS 40.0%
! GGTCAACACAGTGACTTTTA+TGG - chr8_4:10126812-10126831 None:intergenic 40.0%
AGTAACCTCTCATAAGCATC+TGG - chr8_4:10126951-10126970 None:intergenic 40.0%
TGATGAACTTGATGCAGCTT+GGG + chr8_4:10127013-10127032 Msa1312840:CDS 40.0%
CTACCATAAGGATAAAGCTC+TGG - chr8_4:10127086-10127105 None:intergenic 40.0%
CTTTATCCTTATGGTAGCAG+AGG + chr8_4:10127089-10127108 Msa1312840:CDS 40.0%
TGCAAGGCACAATGTAAGAT+GGG + chr8_4:10127136-10127155 Msa1312840:CDS 40.0%
AATGTAAGATGGGGAGATCT+TGG + chr8_4:10127146-10127165 Msa1312840:CDS 40.0%
TGCTTATTCATAAGACGGCT+CGG - chr8_4:10127192-10127211 None:intergenic 40.0%
! TTGTCGTGCTTTGAGTTTGA+GGG + chr8_4:10127334-10127353 Msa1312840:three_prime_UTR 40.0%
GAAGGAAAGGAAAGGCTTTG+AGG - chr8_4:10123135-10123154 None:intergenic 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG - chr8_4:10123157-10123176 None:intergenic 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG - chr8_4:10123158-10123177 None:intergenic 45.0%
AGGTTTGGCTGGAAGTTCAT+TGG + chr8_4:10123387-10123406 Msa1312840:five_prime_UTR 45.0%
!! ATCCTTCAACTTGTTGAGGC+TGG - chr8_4:10123426-10123445 None:intergenic 45.0%
TTGTCAGACTCTGAATCCAC+AGG + chr8_4:10123454-10123473 Msa1312840:five_prime_UTR 45.0%
! CTATGAAGATTGGTTACCCG+AGG + chr8_4:10123558-10123577 Msa1312840:five_prime_UTR 45.0%
ACTATCACAGTTCAGACCTC+GGG - chr8_4:10123577-10123596 None:intergenic 45.0%
CAGAGTTGTACAGACCAGAA+TGG - chr8_4:10124281-10124300 None:intergenic 45.0%
TTCTGGTCTGTACAACTCTG+AGG + chr8_4:10124281-10124300 Msa1312840:CDS 45.0%
TGTTCTGCAGTTGGAGATGT+TGG + chr8_4:10124794-10124813 Msa1312840:intron 45.0%
GTTGGAGATGTTGGCACAAT+TGG + chr8_4:10124803-10124822 Msa1312840:intron 45.0%
GACAATGGTCTCTTATAGGG+TGG + chr8_4:10124919-10124938 Msa1312840:intron 45.0%
AGGGTGGAAGACTTTCAAAC+AGG + chr8_4:10124935-10124954 Msa1312840:intron 45.0%
CTTCAAAAGATGGCTGGACA+AGG + chr8_4:10125025-10125044 Msa1312840:CDS 45.0%
CAAGCTCCTTACCCAAGTAA+TGG - chr8_4:10125245-10125264 None:intergenic 45.0%
TTACTTGGGTAAGGAGCTTG+TGG + chr8_4:10125245-10125264 Msa1312840:CDS 45.0%
!! TTTTTGAGCCTCTATGGTCC+CGG + chr8_4:10125301-10125320 Msa1312840:CDS 45.0%
ATGTAATTCCGGGACCATAG+AGG - chr8_4:10125312-10125331 None:intergenic 45.0%
! TTTGGAACAGAAGGAAGAGG+AGG + chr8_4:10125363-10125382 Msa1312840:CDS 45.0%
TTGGAACAGAAGGAAGAGGA+GGG + chr8_4:10125364-10125383 Msa1312840:CDS 45.0%
! AAGATTGGACATCTGAAGCG+TGG - chr8_4:10125660-10125679 None:intergenic 45.0%
ACGCTTCAGATGTCCAATCT+TGG + chr8_4:10125659-10125678 Msa1312840:intron 45.0%
GTTCATAAGCTATCCTGGAG+AGG - chr8_4:10125861-10125880 None:intergenic 45.0%
TTAAGGACTAAGGCTCTGTG+TGG - chr8_4:10126005-10126024 None:intergenic 45.0%
TATAAGGGCCATAGTAAGGG+TGG + chr8_4:10126204-10126223 Msa1312840:CDS 45.0%
GCTGAGTCGTCAATATAAGC+AGG - chr8_4:10126240-10126259 None:intergenic 45.0%
GTTGGAGTAAGACTACCCTT+TGG - chr8_4:10126267-10126286 None:intergenic 45.0%
AAAGCTGCTGCAGCAAATGT+TGG - chr8_4:10126285-10126304 None:intergenic 45.0%
!! GCTGCAGCAGCTTTGTTTAT+TGG + chr8_4:10126291-10126310 Msa1312840:CDS 45.0%
!! TTGCCGGCTTTCATGAGAAA+AGG - chr8_4:10126339-10126358 None:intergenic 45.0%
! TTTTCTCATGAAAGCCGGCA+AGG + chr8_4:10126338-10126357 Msa1312840:CDS 45.0%
GGCAAGGCTCTTCATACTAA+AGG + chr8_4:10126354-10126373 Msa1312840:CDS 45.0%
AGTACAATTCAGACACGTCC+CGG + chr8_4:10126495-10126514 Msa1312840:CDS 45.0%
! TCCCGGGTAACTTGTACAAA+CGG + chr8_4:10126512-10126531 Msa1312840:CDS 45.0%
TCCGTTTGTACAAGTTACCC+GGG - chr8_4:10126516-10126535 None:intergenic 45.0%
AACAACAAAGTTCCCGGTCT+GGG + chr8_4:10126616-10126635 Msa1312840:CDS 45.0%
TCTAATCTCATTCCCAGACC+GGG - chr8_4:10126631-10126650 None:intergenic 45.0%
GTCTAATCTCATTCCCAGAC+CGG - chr8_4:10126632-10126651 None:intergenic 45.0%
ATGCTATTGAAGGCGAACGA+AGG + chr8_4:10126976-10126995 Msa1312840:CDS 45.0%
GTGATGAACTTGATGCAGCT+TGG + chr8_4:10127012-10127031 Msa1312840:CDS 45.0%
! GCTCCAGAGCTTTATCCTTA+TGG + chr8_4:10127080-10127099 Msa1312840:CDS 45.0%
TTACATTGTGCCTTGCAGCA+AGG - chr8_4:10127133-10127152 None:intergenic 45.0%
CTGCAAGGCACAATGTAAGA+TGG + chr8_4:10127135-10127154 Msa1312840:CDS 45.0%
GCAAGGCACAATGTAAGATG+GGG + chr8_4:10127137-10127156 Msa1312840:CDS 45.0%
! CTTGTCGTGCTTTGAGTTTG+AGG + chr8_4:10127333-10127352 Msa1312840:three_prime_UTR 45.0%
TTGGAGGGGAAGGAAAGGAA+AGG - chr8_4:10123143-10123162 None:intergenic 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG - chr8_4:10123159-10123178 None:intergenic 50.0%
! TTGAGGCTGGCCATCTTCTT+TGG - chr8_4:10123413-10123432 None:intergenic 50.0%
! GTGGACAATTTGCTCGAGCA+AGG + chr8_4:10124675-10124694 Msa1312840:intron 50.0%
TTGCTCGAGCAAGGTGAGTA+CGG + chr8_4:10124684-10124703 Msa1312840:intron 50.0%
AGCAAGGTGAGTACGGTTCA+GGG + chr8_4:10124691-10124710 Msa1312840:intron 50.0%
TGGCTGGACAAGGGTAATTG+TGG + chr8_4:10125035-10125054 Msa1312840:CDS 50.0%
AGCTATCCTGGAGAGGTCAT+GGG - chr8_4:10125854-10125873 None:intergenic 50.0%
AAGCTATCCTGGAGAGGTCA+TGG - chr8_4:10125855-10125874 None:intergenic 50.0%
TGACGACTCAGCTGTTCCAA+AGG + chr8_4:10126248-10126267 Msa1312840:CDS 50.0%
GACGACTCAGCTGTTCCAAA+GGG + chr8_4:10126249-10126268 Msa1312840:CDS 50.0%
ATTGGCAATGCCAGATGGGA+CGG + chr8_4:10126309-10126328 Msa1312840:CDS 50.0%
AAAAGGAACTCCGTCCCATC+TGG - chr8_4:10126322-10126341 None:intergenic 50.0%
GTACAATTCAGACACGTCCC+GGG + chr8_4:10126496-10126515 Msa1312840:CDS 50.0%
CAACAACAAAGTTCCCGGTC+TGG + chr8_4:10126615-10126634 Msa1312840:CDS 50.0%
TCCTTATGGTAGCAGAGGAC+CGG + chr8_4:10127094-10127113 Msa1312840:CDS 50.0%
GTAAGATGGGGAGATCTTGG+TGG + chr8_4:10127149-10127168 Msa1312840:CDS 50.0%
CTCAAAGCACGACAAGTGCA+AGG - chr8_4:10127329-10127348 None:intergenic 50.0%
CGAGTTTGGAGGGGAAGGAA+AGG - chr8_4:10123148-10123167 None:intergenic 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG - chr8_4:10123153-10123172 None:intergenic 55.0%
! GGCCAGCCTCAACAAGTTGA+AGG + chr8_4:10123421-10123440 Msa1312840:five_prime_UTR 55.0%
CTAGGTGTATGCCCGAGCAT+TGG + chr8_4:10124601-10124620 Msa1312840:intron 55.0%
GAGCAAGGTGAGTACGGTTC+AGG + chr8_4:10124690-10124709 Msa1312840:intron 55.0%
GCAAGGTGAGTACGGTTCAG+GGG + chr8_4:10124692-10124711 Msa1312840:intron 55.0%
GAGTACGGTTCAGGGGTAAC+TGG + chr8_4:10124699-10124718 Msa1312840:intron 55.0%
AATGGAGCCACCTGTCAGCT+TGG + chr8_4:10125547-10125566 Msa1312840:intron 55.0%
TCAGCATCCAAGCTGACAGG+TGG - chr8_4:10125557-10125576 None:intergenic 55.0%
ACCTGTCAGCTTGGATGCTG+AGG + chr8_4:10125556-10125575 Msa1312840:intron 55.0%
TCCTCAGCATCCAAGCTGAC+AGG - chr8_4:10125560-10125579 None:intergenic 55.0%
CTTACTCCCATGACCTCTCC+AGG + chr8_4:10125845-10125864 Msa1312840:intron 55.0%
ACCGGTCCTCTGCTACCATA+AGG - chr8_4:10127098-10127117 None:intergenic 55.0%
TATGGTAGCAGAGGACCGGT+TGG + chr8_4:10127098-10127117 Msa1312840:CDS 55.0%
GCAAGGTAGTGTGCTCCAAC+CGG - chr8_4:10127116-10127135 None:intergenic 55.0%
GAGCACACTACCTTGCTGCA+AGG + chr8_4:10127120-10127139 Msa1312840:CDS 55.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 10122997 10127510 10122997 ID=Msa1312840;Name=Msa1312840
chr8_4 mRNA 10122997 10127510 10122997 ID=Msa1312840-mRNA-1;Parent=Msa1312840;Name=Msa1312840-mRNA-1;_AED=0.07;_eAED=0.07;_QI=595|0.88|0.9|1|0.88|0.8|10|329|432
chr8_4 exon 10122997 10123041 10122997 ID=Msa1312840-mRNA-1:exon:3829;Parent=Msa1312840-mRNA-1
chr8_4 exon 10123063 10123579 10123063 ID=Msa1312840-mRNA-1:exon:3830;Parent=Msa1312840-mRNA-1
chr8_4 exon 10123704 10123798 10123704 ID=Msa1312840-mRNA-1:exon:3831;Parent=Msa1312840-mRNA-1
chr8_4 exon 10124230 10124344 10124230 ID=Msa1312840-mRNA-1:exon:3832;Parent=Msa1312840-mRNA-1
chr8_4 exon 10124937 10125142 10124937 ID=Msa1312840-mRNA-1:exon:3833;Parent=Msa1312840-mRNA-1
chr8_4 exon 10125236 10125385 10125236 ID=Msa1312840-mRNA-1:exon:3834;Parent=Msa1312840-mRNA-1
chr8_4 exon 10125475 10125559 10125475 ID=Msa1312840-mRNA-1:exon:3835;Parent=Msa1312840-mRNA-1
chr8_4 exon 10126147 10126376 10126147 ID=Msa1312840-mRNA-1:exon:3836;Parent=Msa1312840-mRNA-1
chr8_4 exon 10126483 10126683 10126483 ID=Msa1312840-mRNA-1:exon:3837;Parent=Msa1312840-mRNA-1
chr8_4 exon 10126932 10127510 10126932 ID=Msa1312840-mRNA-1:exon:3838;Parent=Msa1312840-mRNA-1
chr8_4 five_prime_UTR 10122997 10123041 10122997 ID=Msa1312840-mRNA-1:five_prime_utr;Parent=Msa1312840-mRNA-1
chr8_4 five_prime_UTR 10123063 10123579 10123063 ID=Msa1312840-mRNA-1:five_prime_utr;Parent=Msa1312840-mRNA-1
chr8_4 five_prime_UTR 10123704 10123736 10123704 ID=Msa1312840-mRNA-1:five_prime_utr;Parent=Msa1312840-mRNA-1
chr8_4 CDS 10123737 10123798 10123737 ID=Msa1312840-mRNA-1:cds;Parent=Msa1312840-mRNA-1
chr8_4 CDS 10124230 10124344 10124230 ID=Msa1312840-mRNA-1:cds;Parent=Msa1312840-mRNA-1
chr8_4 CDS 10124937 10125142 10124937 ID=Msa1312840-mRNA-1:cds;Parent=Msa1312840-mRNA-1
chr8_4 CDS 10125236 10125385 10125236 ID=Msa1312840-mRNA-1:cds;Parent=Msa1312840-mRNA-1
chr8_4 CDS 10125475 10125559 10125475 ID=Msa1312840-mRNA-1:cds;Parent=Msa1312840-mRNA-1
chr8_4 CDS 10126147 10126376 10126147 ID=Msa1312840-mRNA-1:cds;Parent=Msa1312840-mRNA-1
chr8_4 CDS 10126483 10126683 10126483 ID=Msa1312840-mRNA-1:cds;Parent=Msa1312840-mRNA-1
chr8_4 CDS 10126932 10127181 10126932 ID=Msa1312840-mRNA-1:cds;Parent=Msa1312840-mRNA-1
chr8_4 three_prime_UTR 10127182 10127510 10127182 ID=Msa1312840-mRNA-1:three_prime_utr;Parent=Msa1312840-mRNA-1
Gene Sequence

>Msa1312840

ATGACTGATGAAGAGTTAAGGAACATGATTAGCCAGACTTTAACATGCAGAATTGACAAGAGGGCAAATTGTGCAGATAAAATGGATCAATTCTTGAAAAGATGCTTTTACCATTCTGGTCTGTACAACTCTGAGGAAGACTTTGTTGATTTGGATTCCAAGCTAAAAAAGAAAGAGGGTGGAAGACTTTCAAACAGGTTGTTTTATTTGTCAATACCTCCAAACATTTTTGTGGATGTGGTGAGATGTGCTAGCCTCAAAGCTTCTTCAAAAGATGGCTGGACAAGGGTAATTGTGGAAAAGCCGTTTGGTCGTGATTCTGAATCCTCTAGTGAGCTAACAAGAAATTTGAAGCAGTACCTCACTGAAGACCAAATATTCAGGATTGACCATTACTTGGGTAAGGAGCTTGTGGAGAATCTCTCAGTGCTTCGTTTTTCAAATCTTGTTTTTGAGCCTCTATGGTCCCGGAATTACATTCGTAATGTGCAGCTAATATTTTCTGAAGATTTTGGAACAGAAGGAAGAGGAGGTTATTTTGATAACTACGGAATTATTCGTGATATAATGCAAAATCACCTTGTACAAATACTAGCATTGTTTGCAATGGAGCCACCTGTGAAGGTTCTGAGATCAATGAGACCAATACAGCTTGAAGATGTTGTAGTTGGTCAATATAAGGGCCATAGTAAGGGTGGTAGATCATATCCTGCTTATATTGACGACTCAGCTGTTCCAAAGGGTAGTCTTACTCCAACATTTGCTGCAGCAGCTTTGTTTATTGGCAATGCCAGATGGGACGGAGTTCCTTTTCTCATGAAAGCCGGCAAGGCTCTTCATACTAAAGGTGCAGAAATCAGAGTACAATTCAGACACGTCCCGGGTAACTTGTACAAACGGAACTTTGGAACTGATTTGGACAAAGCTACAAATGAGCTTGTGCTTCGTGTACAACCTGATGAAGCTATATATTTGAAGATCAACAACAAAGTTCCCGGTCTGGGAATGAGATTAGACAGAAGTGACCTCAATTTGCTTTACAGATCAAGGTATGCAAGAGAAATACCAGATGCTTATGAGAGGTTACTCTTAGATGCTATTGAAGGCGAACGAAGGCTGTTTATCAGAAGTGATGAACTTGATGCAGCTTGGGCACTATTCACTCCTTTGCTAAAAGAAATTGAAAACAAGAAGATTGCTCCAGAGCTTTATCCTTATGGTAGCAGAGGACCGGTTGGAGCACACTACCTTGCTGCAAGGCACAATGTAAGATGGGGAGATCTTGGTGGCGATGACTGA

Protein sequence

>Msa1312840

MTDEELRNMISQTLTCRIDKRANCADKMDQFLKRCFYHSGLYNSEEDFVDLDSKLKKKEGGRLSNRLFYLSIPPNIFVDVVRCASLKASSKDGWTRVIVEKPFGRDSESSSELTRNLKQYLTEDQIFRIDHYLGKELVENLSVLRFSNLVFEPLWSRNYIRNVQLIFSEDFGTEGRGGYFDNYGIIRDIMQNHLVQILALFAMEPPVKVLRSMRPIQLEDVVVGQYKGHSKGGRSYPAYIDDSAVPKGSLTPTFAAAALFIGNARWDGVPFLMKAGKALHTKGAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRVQPDEAIYLKINNKVPGLGMRLDRSDLNLLYRSRYAREIPDAYERLLLDAIEGERRLFIRSDELDAAWALFTPLLKEIENKKIAPELYPYGSRGPVGAHYLAARHNVRWGDLGGDD*