AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0472570


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0472570 MtrunA17_Chr3g0127901 93.082 318 16 3 1 317 41 353 0.0 545
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0472570 AT5G24490.1 71.130 239 67 2 80 317 71 308 7.95e-120 347

Find 122 sgRNAs with CRISPR-Local

Find 326 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGGGTGACTTGGTCTTTA+TGG 0.117605 3_3:+74972717 None:intergenic
ACGATTGTCTCTTTCCATTT+TGG 0.132482 3_3:+74972936 None:intergenic
GATAGTAATAGCAATTTCTT+TGG 0.267107 3_3:-74971146 Msa0472570:three_prime_UTR
GCTGCTGCCGCCGCGGCGTT+TGG 0.274036 3_3:+74972621 None:intergenic
ATTGCTTCAAACACGGTTAA+AGG 0.283097 3_3:+74971534 None:intergenic
ATCTGCTTCACCGTTTCCTT+TGG 0.285013 3_3:+74971281 None:intergenic
AAGAAAGCTGAGAAAGATTA+AGG 0.301741 3_3:-74972003 Msa0472570:CDS
AAACGGTGAAGCAGATAAAT+TGG 0.329912 3_3:-74971274 Msa0472570:CDS
CGCCGCGGCGGCAGCAGCGG+CGG 0.337270 3_3:-74972616 Msa0472570:CDS
ACTCGTGGTGGAGGAGAATT+TGG 0.356620 3_3:-74972250 Msa0472570:CDS
AAAAGAAAAGAAGGAGGTTA+TGG 0.362880 3_3:-74971315 Msa0472570:CDS
TACTGTTTAGTCTGTATATA+TGG 0.366046 3_3:+74972863 None:intergenic
TTCATCCTCCTCATCCTTTG+TGG 0.374734 3_3:+74971905 None:intergenic
ATGTTCATCGTCATCCAAAA+TGG 0.381039 3_3:-74972950 Msa0472570:five_prime_UTR
TCTGCTTCACCGTTTCCTTT+GGG 0.387106 3_3:+74971282 None:intergenic
TCCTCATCCTTTGTGGGTAA+TGG 0.390537 3_3:+74971912 None:intergenic
AAGAGGAGGAGGATGGAAAA+AGG 0.391250 3_3:+74972782 None:intergenic
TTTCTTCTTCCTCCTTCTGT+GGG 0.392843 3_3:+74971871 None:intergenic
TTAGCCGGTTCAACCACTAT+AGG 0.402037 3_3:+74971249 None:intergenic
TTCCATCCTCCTCCTCTTCG+CGG 0.403031 3_3:-74972777 Msa0472570:CDS
GCATGGGGTGGTGCGGGCTG+AGG 0.403257 3_3:-74972078 Msa0472570:CDS
TACCTATGCGAGTATAGATT+TGG 0.408357 3_3:-74972042 Msa0472570:CDS
ACCTCGCATCTACGTGTTCT+AGG 0.409433 3_3:+74972220 None:intergenic
AAAGAGGCATGGGGTGGTGC+GGG 0.416801 3_3:-74972084 Msa0472570:CDS
TGAAATTCTAATGGAGACTC+TGG 0.418491 3_3:-74971107 Msa0472570:three_prime_UTR
GCCACATGAAGGGATCTAAT+AGG 0.418680 3_3:-74971959 Msa0472570:CDS
TCATCCTCCTCATCCTTTGT+GGG 0.419500 3_3:+74971906 None:intergenic
AAACGCCGCGGCGGCAGCAG+CGG 0.425141 3_3:-74972619 Msa0472570:CDS
TCTCCGTTGTTTGTATGTCA+TGG 0.434579 3_3:-74972588 Msa0472570:CDS
AGTTGCATATGAAATTCTAA+TGG 0.448766 3_3:-74971116 Msa0472570:three_prime_UTR
TTCCGTCAAATTAATCATCC+AGG 0.449850 3_3:-74972551 Msa0472570:CDS
TGTAGAGAGGGTTCTTTAGC+CGG 0.466266 3_3:+74971234 None:intergenic
GTCTTTATGGAGGAAGGTAG+AGG 0.468202 3_3:+74972730 None:intergenic
ACCCTGGATGATTAATTTGA+CGG 0.468958 3_3:+74972549 None:intergenic
TCCTTTCATTCTTGTAGAGA+GGG 0.474483 3_3:+74971222 None:intergenic
TGGATAATCTATGAGTAGGC+TGG 0.474943 3_3:-74973008 None:intergenic
CTTTGTTTACAAAGAGGCAT+GGG 0.478410 3_3:-74972094 Msa0472570:CDS
ATTGTATACAAAAGAAAAGA+AGG 0.479149 3_3:-74971324 Msa0472570:CDS
CTCCGTTGTTTGTATGTCAT+GGG 0.482798 3_3:-74972587 Msa0472570:CDS
AAGGTTTGTGTGGAAGTTGA+AGG 0.492805 3_3:+74972801 None:intergenic
GGAGCCTATAGTGGTTGAAC+CGG 0.496037 3_3:-74971253 Msa0472570:CDS
AAGGCACCGCGAAGAGGAGG+AGG 0.497107 3_3:+74972771 None:intergenic
CAAAGAGGCATGGGGTGGTG+CGG 0.497915 3_3:-74972085 Msa0472570:CDS
AGCAATTGACCAGTTGGAAA+TGG 0.498256 3_3:-74971517 Msa0472570:CDS
TCTATGAGTAGGCTGGGAAA+TGG 0.499776 3_3:-74973001 Msa0472570:five_prime_UTR
CTCATTATTCCCAAAGGAAA+CGG 0.502483 3_3:-74971291 Msa0472570:CDS
CTTCATTCATAATATGTCAA+TGG 0.507528 3_3:-74972830 Msa0472570:exon
TTCTCCTGTCAAGAATGTTG+TGG 0.508305 3_3:+74972696 None:intergenic
CCCTCCACAACATTCTTGAC+AGG 0.515980 3_3:-74972700 Msa0472570:CDS
ACCCTCTCTACAAGAATGAA+AGG 0.518644 3_3:-74971223 Msa0472570:exon
CTGTATATATGGAAGAAAGA+AGG 0.520562 3_3:+74972874 None:intergenic
AGATAAATTGGAGCCTATAG+TGG 0.523119 3_3:-74971262 Msa0472570:CDS
CATGAGCAACCATTTCCAAC+TGG 0.524804 3_3:+74971508 None:intergenic
TCCTGTCAAGAATGTTGTGG+AGG 0.525749 3_3:+74972699 None:intergenic
ACTTTGTTTACAAAGAGGCA+TGG 0.529041 3_3:-74972095 Msa0472570:CDS
GAAATTCTAATGGAGACTCT+GGG 0.530283 3_3:-74971106 Msa0472570:three_prime_UTR
GTTTGAAGCAATTGACCAGT+TGG 0.532744 3_3:-74971523 Msa0472570:CDS
GGATAATCTATGAGTAGGCT+GGG 0.534094 3_3:-74973007 None:intergenic
AGGTTTGTGTGGAAGTTGAA+GGG 0.535418 3_3:+74972802 None:intergenic
GCCATTACCCACAAAGGATG+AGG 0.535853 3_3:-74971913 Msa0472570:CDS
TTCCTTTCATTCTTGTAGAG+AGG 0.539789 3_3:+74971221 None:intergenic
GAATGTTGTGGAGGGTGACT+TGG 0.542454 3_3:+74972708 None:intergenic
AGAAAGGCACCGCGAAGAGG+AGG 0.543397 3_3:+74972768 None:intergenic
TGATCATGGTCGCCACATGA+AGG 0.549029 3_3:-74971970 Msa0472570:CDS
AACCGCCGCTGCTGCCGCCG+CGG 0.549932 3_3:+74972614 None:intergenic
ATATGGAAGAAAGAAGGAAG+AGG 0.551920 3_3:+74972880 None:intergenic
CACCGCGAAGAGGAGGAGGA+TGG 0.556744 3_3:+74972775 None:intergenic
GTTGTTTGTATGTCATGGGA+CGG 0.558277 3_3:-74972583 Msa0472570:CDS
GTTATGTGCAGCACACTCAA+TGG 0.559392 3_3:+74970996 None:intergenic
ACAACATTCTTGACAGGAGA+AGG 0.561368 3_3:-74972694 Msa0472570:CDS
GCGTTTGGTTGTTGTTGTTG+TGG 0.561693 3_3:+74972636 None:intergenic
AAGAGATTGTACATGATTAG+CGG 0.565384 3_3:-74971168 Msa0472570:three_prime_UTR
GACTTGGTCTTTATGGAGGA+AGG 0.566043 3_3:+74972724 None:intergenic
GATCATGGTCGCCACATGAA+GGG 0.566295 3_3:-74971969 Msa0472570:CDS
ATTAATTTGACGGAAGAGAG+TGG 0.569781 3_3:+74972559 None:intergenic
TGAAATCTCCCCACAGAAGG+AGG 0.570050 3_3:-74971880 Msa0472570:CDS
CAGCTTTCTTTGAATGACCG+AGG 0.571209 3_3:+74972016 None:intergenic
ACAGCACGTAGAGGAGAAAG+TGG 0.574125 3_3:-74972329 Msa0472570:CDS
AGACTATCTACTCGTGGTGG+AGG 0.576666 3_3:-74972259 Msa0472570:CDS
AGGTTACTTTGTTTACAAAG+AGG 0.577297 3_3:-74972100 Msa0472570:CDS
TTTATGGAGGAAGGTAGAGG+AGG 0.579108 3_3:+74972733 None:intergenic
TACAGAAAGGCACCGCGAAG+AGG 0.580436 3_3:+74972765 None:intergenic
GTTATGGATAATCTATGAGT+AGG 0.580925 3_3:-74973012 None:intergenic
AACTGAAATCTCCCCACAGA+AGG 0.585420 3_3:-74971883 Msa0472570:CDS
TCCGTCAAATTAATCATCCA+GGG 0.585766 3_3:-74972550 Msa0472570:CDS
AGAGGAAATAATGATGATGA+TGG 0.585904 3_3:+74972898 None:intergenic
CTGGTCAATTGCTTCAAACA+CGG 0.587799 3_3:+74971527 None:intergenic
TTCTTCTTCCTCCTTCTGTG+GGG 0.588690 3_3:+74971872 None:intergenic
GGTGCGGGCTGAGGAACATG+CGG 0.592841 3_3:-74972069 Msa0472570:CDS
CAGCACGTAGAGGAGAAAGT+GGG 0.593436 3_3:-74972328 Msa0472570:CDS
GAGTATAGATTTGGTGTCCT+CGG 0.603285 3_3:-74972033 Msa0472570:CDS
TATGGACTCATTATTCCCAA+AGG 0.604836 3_3:-74971297 Msa0472570:CDS
GAGGAAGAGAGAGTACAGAA+AGG 0.608429 3_3:+74972752 None:intergenic
GGGTGACTTGGTCTTTATGG+AGG 0.609776 3_3:+74972720 None:intergenic
GGTGGAGGAGAATTTGGTCG+AGG 0.611696 3_3:-74972244 Msa0472570:CDS
TAGGTTGAAATTTAGAGAGG+CGG 0.613252 3_3:-74971940 Msa0472570:CDS
GCTTCAAACACGGTTAAAGG+AGG 0.615142 3_3:+74971537 None:intergenic
CACCAAATCTATACTCGCAT+AGG 0.617087 3_3:+74972040 None:intergenic
GTTTACAAAGAGGCATGGGG+TGG 0.620636 3_3:-74972090 Msa0472570:CDS
TAATCATGTACAATCTCTTG+TGG 0.626430 3_3:+74971172 None:intergenic
TTTGGTTGTTGTTGTTGTGG+CGG 0.626673 3_3:+74972639 None:intergenic
ATTCAACTGTGTCTCACACG+CGG 0.627223 3_3:+74972977 None:intergenic
ACCTATTAGATCCCTTCATG+TGG 0.628686 3_3:+74971958 None:intergenic
TAATAGGTTGAAATTTAGAG+AGG 0.630490 3_3:-74971943 Msa0472570:CDS
AAAGCAGACAACATTGTCAG+AGG 0.631060 3_3:+74970955 None:intergenic
TTCAACTGTGTCTCACACGC+GGG 0.640451 3_3:+74972978 None:intergenic
ACATTCTTGACAGGAGAAGG+AGG 0.645382 3_3:-74972691 Msa0472570:CDS
ACCTAGAACACGTAGATGCG+AGG 0.650273 3_3:-74972221 Msa0472570:intron
AGCACGTAGAGGAGAAAGTG+GGG 0.652859 3_3:-74972327 Msa0472570:CDS
GGTATTGCCATTACCCACAA+AGG 0.654530 3_3:-74971919 Msa0472570:CDS
ATTACCCACAAAGGATGAGG+AGG 0.656628 3_3:-74971910 Msa0472570:CDS
TTTGTTTACAAAGAGGCATG+GGG 0.659293 3_3:-74972093 Msa0472570:CDS
CCTGTCAAGAATGTTGTGGA+GGG 0.660271 3_3:+74972700 None:intergenic
ACAACAACCAAACGCCGCGG+CGG 0.660743 3_3:-74972628 Msa0472570:CDS
TGCGGTGAAACAGCACGTAG+AGG 0.663832 3_3:-74972338 Msa0472570:CDS
GTATACAAAAGAAAAGAAGG+AGG 0.667757 3_3:-74971321 Msa0472570:CDS
ACAACAACAACCAAACGCCG+CGG 0.673009 3_3:-74972631 Msa0472570:CDS
AAATTCTAATGGAGACTCTG+GGG 0.673319 3_3:-74971105 Msa0472570:three_prime_UTR
GTCCCATGACATACAAACAA+CGG 0.689809 3_3:+74972585 None:intergenic
GATGTGAGACTATCTACTCG+TGG 0.713178 3_3:-74972265 Msa0472570:CDS
TTGAGTTCAGCTGAATGATG+CGG 0.727884 3_3:-74972356 Msa0472570:intron
GTGAGACTATCTACTCGTGG+TGG 0.731336 3_3:-74972262 Msa0472570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTAAAAACTTTAAAACT+TGG + chr3_3:74972815-74972834 None:intergenic 10.0%
!!! TTATTAAAAACTTTAAAACT+TGG + chr3_3:74972815-74972834 None:intergenic 10.0%
!! TAGTAATGATGATAATAAAA+TGG + chr3_3:74971382-74971401 None:intergenic 15.0%
!!! TTTAAAATTTTGAGTAATCT+GGG + chr3_3:74972985-74973004 None:intergenic 15.0%
!!! ATTTAAAATTTTGAGTAATC+TGG + chr3_3:74972986-74973005 None:intergenic 15.0%
!! TAGTAATGATGATAATAAAA+TGG + chr3_3:74971382-74971401 None:intergenic 15.0%
!!! TTTAAAATTTTGAGTAATCT+GGG + chr3_3:74972985-74973004 None:intergenic 15.0%
!!! ATTTAAAATTTTGAGTAATC+TGG + chr3_3:74972986-74973005 None:intergenic 15.0%
!! GATGATAATAAAATGGAAAT+GGG + chr3_3:74971375-74971394 None:intergenic 20.0%
!! TGATGATAATAAAATGGAAA+TGG + chr3_3:74971376-74971395 None:intergenic 20.0%
!! ATTAGAAAAACTTCAATTTC+TGG - chr3_3:74972139-74972158 Msa0472570:intron 20.0%
!!! TTCAATTTTATGCTATCTTA+GGG - chr3_3:74972488-74972507 Msa0472570:intron 20.0%
!! ATTGTATACAAAAGAAAAGA+AGG - chr3_3:74972550-74972569 Msa0472570:CDS 20.0%
!!! AGTTTTTAATAATGTACACT+TGG - chr3_3:74972823-74972842 Msa0472570:exon 20.0%
!! GATGATAATAAAATGGAAAT+GGG + chr3_3:74971375-74971394 None:intergenic 20.0%
!! TGATGATAATAAAATGGAAA+TGG + chr3_3:74971376-74971395 None:intergenic 20.0%
!! ATTAGAAAAACTTCAATTTC+TGG - chr3_3:74972139-74972158 Msa0472570:intron 20.0%
!!! TTCAATTTTATGCTATCTTA+GGG - chr3_3:74972488-74972507 Msa0472570:intron 20.0%
!! ATTGTATACAAAAGAAAAGA+AGG - chr3_3:74972550-74972569 Msa0472570:CDS 20.0%
!!! AGTTTTTAATAATGTACACT+TGG - chr3_3:74972823-74972842 Msa0472570:exon 20.0%
! TACTGTTTAGTCTGTATATA+TGG + chr3_3:74971014-74971033 None:intergenic 25.0%
! CTTCATTCATAATATGTCAA+TGG - chr3_3:74971044-74971063 Msa0472570:three_prime_UTR 25.0%
! ATATTCACAATGAGAAGAAA+CGG - chr3_3:74971460-74971479 Msa0472570:intron 25.0%
!! TGATTTCTATGATTTGCATT+AGG - chr3_3:74971754-74971773 Msa0472570:intron 25.0%
!! TAATAGGTTGAAATTTAGAG+AGG - chr3_3:74971931-74971950 Msa0472570:CDS 25.0%
!!! GTTATATTTCTAGAATGACA+CGG + chr3_3:74972099-74972118 None:intergenic 25.0%
!!! AAAAACTTCAATTTCTGGTT+TGG - chr3_3:74972144-74972163 Msa0472570:intron 25.0%
! ATAAAATGTAGTGAGAAACA+TGG + chr3_3:74972460-74972479 None:intergenic 25.0%
!! GTTCAATTTTATGCTATCTT+AGG - chr3_3:74972487-74972506 Msa0472570:intron 25.0%
!! TCAATTTTATGCTATCTTAG+GGG - chr3_3:74972489-74972508 Msa0472570:intron 25.0%
! GATAGTAATAGCAATTTCTT+TGG - chr3_3:74972728-74972747 Msa0472570:CDS 25.0%
! AGTTGCATATGAAATTCTAA+TGG - chr3_3:74972758-74972777 Msa0472570:CDS 25.0%
! TACTGTTTAGTCTGTATATA+TGG + chr3_3:74971014-74971033 None:intergenic 25.0%
! CTTCATTCATAATATGTCAA+TGG - chr3_3:74971044-74971063 Msa0472570:three_prime_UTR 25.0%
! ATATTCACAATGAGAAGAAA+CGG - chr3_3:74971460-74971479 Msa0472570:intron 25.0%
!! TGATTTCTATGATTTGCATT+AGG - chr3_3:74971754-74971773 Msa0472570:intron 25.0%
!! TAATAGGTTGAAATTTAGAG+AGG - chr3_3:74971931-74971950 Msa0472570:CDS 25.0%
!!! GTTATATTTCTAGAATGACA+CGG + chr3_3:74972099-74972118 None:intergenic 25.0%
!!! AAAAACTTCAATTTCTGGTT+TGG - chr3_3:74972144-74972163 Msa0472570:intron 25.0%
! ATAAAATGTAGTGAGAAACA+TGG + chr3_3:74972460-74972479 None:intergenic 25.0%
!! GTTCAATTTTATGCTATCTT+AGG - chr3_3:74972487-74972506 Msa0472570:intron 25.0%
!! TCAATTTTATGCTATCTTAG+GGG - chr3_3:74972489-74972508 Msa0472570:intron 25.0%
! GATAGTAATAGCAATTTCTT+TGG - chr3_3:74972728-74972747 Msa0472570:CDS 25.0%
! AGTTGCATATGAAATTCTAA+TGG - chr3_3:74972758-74972777 Msa0472570:CDS 25.0%
! AGAGGAAATAATGATGATGA+TGG + chr3_3:74970979-74970998 None:intergenic 30.0%
CTGTATATATGGAAGAAAGA+AGG + chr3_3:74971003-74971022 None:intergenic 30.0%
TATAACTAATCTACTAGCTG+TGG - chr3_3:74971495-74971514 Msa0472570:CDS 30.0%
!! TTTGCTTTTGTTGTAAACCT+AGG - chr3_3:74971703-74971722 Msa0472570:intron 30.0%
! AGGTTACTTTGTTTACAAAG+AGG - chr3_3:74971774-74971793 Msa0472570:intron 30.0%
AAGAAAGCTGAGAAAGATTA+AGG - chr3_3:74971871-74971890 Msa0472570:CDS 30.0%
AAGGAAAAAGAAACTGATCA+TGG - chr3_3:74971890-74971909 Msa0472570:CDS 30.0%
GGAAGAAGAAAAACTTATTG+AGG - chr3_3:74972015-74972034 Msa0472570:CDS 30.0%
AGAAGAAAAACTTATTGAGG+AGG - chr3_3:74972018-74972037 Msa0472570:CDS 30.0%
ATGATTAATGTCAACAACGA+AGG + chr3_3:74972050-74972069 None:intergenic 30.0%
GTAGCTAGAAATATCATATC+AGG - chr3_3:74972073-74972092 Msa0472570:CDS 30.0%
!!! ACTACTGTTTTAGCTATCTT+TGG - chr3_3:74972429-74972448 Msa0472570:intron 30.0%
GTATACAAAAGAAAAGAAGG+AGG - chr3_3:74972553-74972572 Msa0472570:CDS 30.0%
AAAAGAAAAGAAGGAGGTTA+TGG - chr3_3:74972559-74972578 Msa0472570:CDS 30.0%
TAATCATGTACAATCTCTTG+TGG + chr3_3:74972705-74972724 None:intergenic 30.0%
AAGAGATTGTACATGATTAG+CGG - chr3_3:74972706-74972725 Msa0472570:CDS 30.0%
! CTCTTTCATTTTACAATCAC+TGG + chr3_3:74972853-74972872 None:intergenic 30.0%
! AGAGGAAATAATGATGATGA+TGG + chr3_3:74970979-74970998 None:intergenic 30.0%
CTGTATATATGGAAGAAAGA+AGG + chr3_3:74971003-74971022 None:intergenic 30.0%
TATAACTAATCTACTAGCTG+TGG - chr3_3:74971495-74971514 Msa0472570:CDS 30.0%
!! TTTGCTTTTGTTGTAAACCT+AGG - chr3_3:74971703-74971722 Msa0472570:intron 30.0%
! AGGTTACTTTGTTTACAAAG+AGG - chr3_3:74971774-74971793 Msa0472570:intron 30.0%
AAGAAAGCTGAGAAAGATTA+AGG - chr3_3:74971871-74971890 Msa0472570:CDS 30.0%
AAGGAAAAAGAAACTGATCA+TGG - chr3_3:74971890-74971909 Msa0472570:CDS 30.0%
GGAAGAAGAAAAACTTATTG+AGG - chr3_3:74972015-74972034 Msa0472570:CDS 30.0%
AGAAGAAAAACTTATTGAGG+AGG - chr3_3:74972018-74972037 Msa0472570:CDS 30.0%
ATGATTAATGTCAACAACGA+AGG + chr3_3:74972050-74972069 None:intergenic 30.0%
GTAGCTAGAAATATCATATC+AGG - chr3_3:74972073-74972092 Msa0472570:CDS 30.0%
!!! ACTACTGTTTTAGCTATCTT+TGG - chr3_3:74972429-74972448 Msa0472570:intron 30.0%
GTATACAAAAGAAAAGAAGG+AGG - chr3_3:74972553-74972572 Msa0472570:CDS 30.0%
AAAAGAAAAGAAGGAGGTTA+TGG - chr3_3:74972559-74972578 Msa0472570:CDS 30.0%
TAATCATGTACAATCTCTTG+TGG + chr3_3:74972705-74972724 None:intergenic 30.0%
AAGAGATTGTACATGATTAG+CGG - chr3_3:74972706-74972725 Msa0472570:CDS 30.0%
! CTCTTTCATTTTACAATCAC+TGG + chr3_3:74972853-74972872 None:intergenic 30.0%
ATGTTCATCGTCATCCAAAA+TGG - chr3_3:74970924-74970943 Msa0472570:three_prime_UTR 35.0%
! ACGATTGTCTCTTTCCATTT+TGG + chr3_3:74970941-74970960 None:intergenic 35.0%
ATATGGAAGAAAGAAGGAAG+AGG + chr3_3:74970997-74971016 None:intergenic 35.0%
! ATTAATTTGACGGAAGAGAG+TGG + chr3_3:74971318-74971337 None:intergenic 35.0%
TTCCGTCAAATTAATCATCC+AGG - chr3_3:74971323-74971342 Msa0472570:CDS 35.0%
TCCGTCAAATTAATCATCCA+GGG - chr3_3:74971324-74971343 Msa0472570:CDS 35.0%
! ACCCTGGATGATTAATTTGA+CGG + chr3_3:74971328-74971347 None:intergenic 35.0%
!! ATACCTGCATATTTTTACCC+TGG + chr3_3:74971344-74971363 None:intergenic 35.0%
!! CTTTTGTTGTAAACCTAGGA+TGG - chr3_3:74971707-74971726 Msa0472570:intron 35.0%
! ACTTTGTTTACAAAGAGGCA+TGG - chr3_3:74971779-74971798 Msa0472570:intron 35.0%
! CTTTGTTTACAAAGAGGCAT+GGG - chr3_3:74971780-74971799 Msa0472570:intron 35.0%
! TTTGTTTACAAAGAGGCATG+GGG - chr3_3:74971781-74971800 Msa0472570:intron 35.0%
TACCTATGCGAGTATAGATT+TGG - chr3_3:74971832-74971851 Msa0472570:intron 35.0%
! TAGGTTGAAATTTAGAGAGG+CGG - chr3_3:74971934-74971953 Msa0472570:CDS 35.0%
GAAAAACTTATTGAGGAGGT+TGG - chr3_3:74972022-74972041 Msa0472570:CDS 35.0%
ATTGCTTCAAACACGGTTAA+AGG + chr3_3:74972343-74972362 None:intergenic 35.0%
! GCTTTTCGAAATGAAGAATC+TGG - chr3_3:74972397-74972416 Msa0472570:intron 35.0%
! AAGTGTACTTCCTTTGTTTC+AGG - chr3_3:74972517-74972536 Msa0472570:intron 35.0%
! AGTGTACTTCCTTTGTTTCA+GGG - chr3_3:74972518-74972537 Msa0472570:intron 35.0%
TATGGACTCATTATTCCCAA+AGG - chr3_3:74972577-74972596 Msa0472570:CDS 35.0%
CTCATTATTCCCAAAGGAAA+CGG - chr3_3:74972583-74972602 Msa0472570:CDS 35.0%
AAACGGTGAAGCAGATAAAT+TGG - chr3_3:74972600-74972619 Msa0472570:CDS 35.0%
AGATAAATTGGAGCCTATAG+TGG - chr3_3:74972612-74972631 Msa0472570:CDS 35.0%
TCCTTTCATTCTTGTAGAGA+GGG + chr3_3:74972655-74972674 None:intergenic 35.0%
TTCCTTTCATTCTTGTAGAG+AGG + chr3_3:74972656-74972675 None:intergenic 35.0%
TGAAATTCTAATGGAGACTC+TGG - chr3_3:74972767-74972786 Msa0472570:CDS 35.0%
GAAATTCTAATGGAGACTCT+GGG - chr3_3:74972768-74972787 Msa0472570:CDS 35.0%
AAATTCTAATGGAGACTCTG+GGG - chr3_3:74972769-74972788 Msa0472570:CDS 35.0%
ATGTTCATCGTCATCCAAAA+TGG - chr3_3:74970924-74970943 Msa0472570:three_prime_UTR 35.0%
! ACGATTGTCTCTTTCCATTT+TGG + chr3_3:74970941-74970960 None:intergenic 35.0%
ATATGGAAGAAAGAAGGAAG+AGG + chr3_3:74970997-74971016 None:intergenic 35.0%
! ATTAATTTGACGGAAGAGAG+TGG + chr3_3:74971318-74971337 None:intergenic 35.0%
TTCCGTCAAATTAATCATCC+AGG - chr3_3:74971323-74971342 Msa0472570:CDS 35.0%
TCCGTCAAATTAATCATCCA+GGG - chr3_3:74971324-74971343 Msa0472570:CDS 35.0%
! ACCCTGGATGATTAATTTGA+CGG + chr3_3:74971328-74971347 None:intergenic 35.0%
!! ATACCTGCATATTTTTACCC+TGG + chr3_3:74971344-74971363 None:intergenic 35.0%
!! CTTTTGTTGTAAACCTAGGA+TGG - chr3_3:74971707-74971726 Msa0472570:intron 35.0%
! ACTTTGTTTACAAAGAGGCA+TGG - chr3_3:74971779-74971798 Msa0472570:intron 35.0%
! CTTTGTTTACAAAGAGGCAT+GGG - chr3_3:74971780-74971799 Msa0472570:intron 35.0%
! TTTGTTTACAAAGAGGCATG+GGG - chr3_3:74971781-74971800 Msa0472570:intron 35.0%
TACCTATGCGAGTATAGATT+TGG - chr3_3:74971832-74971851 Msa0472570:intron 35.0%
! TAGGTTGAAATTTAGAGAGG+CGG - chr3_3:74971934-74971953 Msa0472570:CDS 35.0%
GAAAAACTTATTGAGGAGGT+TGG - chr3_3:74972022-74972041 Msa0472570:CDS 35.0%
ATTGCTTCAAACACGGTTAA+AGG + chr3_3:74972343-74972362 None:intergenic 35.0%
! GCTTTTCGAAATGAAGAATC+TGG - chr3_3:74972397-74972416 Msa0472570:intron 35.0%
! AAGTGTACTTCCTTTGTTTC+AGG - chr3_3:74972517-74972536 Msa0472570:intron 35.0%
! AGTGTACTTCCTTTGTTTCA+GGG - chr3_3:74972518-74972537 Msa0472570:intron 35.0%
TATGGACTCATTATTCCCAA+AGG - chr3_3:74972577-74972596 Msa0472570:CDS 35.0%
CTCATTATTCCCAAAGGAAA+CGG - chr3_3:74972583-74972602 Msa0472570:CDS 35.0%
AAACGGTGAAGCAGATAAAT+TGG - chr3_3:74972600-74972619 Msa0472570:CDS 35.0%
AGATAAATTGGAGCCTATAG+TGG - chr3_3:74972612-74972631 Msa0472570:CDS 35.0%
TCCTTTCATTCTTGTAGAGA+GGG + chr3_3:74972655-74972674 None:intergenic 35.0%
TTCCTTTCATTCTTGTAGAG+AGG + chr3_3:74972656-74972675 None:intergenic 35.0%
TGAAATTCTAATGGAGACTC+TGG - chr3_3:74972767-74972786 Msa0472570:CDS 35.0%
GAAATTCTAATGGAGACTCT+GGG - chr3_3:74972768-74972787 Msa0472570:CDS 35.0%
AAATTCTAATGGAGACTCTG+GGG - chr3_3:74972769-74972788 Msa0472570:CDS 35.0%
AGGTTTGTGTGGAAGTTGAA+GGG + chr3_3:74971075-74971094 None:intergenic 40.0%
AAGGTTTGTGTGGAAGTTGA+AGG + chr3_3:74971076-74971095 None:intergenic 40.0%
AGGATGGAAAAAGGTTTGTG+TGG + chr3_3:74971086-74971105 None:intergenic 40.0%
TTCTCCTGTCAAGAATGTTG+TGG + chr3_3:74971181-74971200 None:intergenic 40.0%
ACAACATTCTTGACAGGAGA+AGG - chr3_3:74971180-74971199 Msa0472570:three_prime_UTR 40.0%
! TTTGGTTGTTGTTGTTGTGG+CGG + chr3_3:74971238-74971257 None:intergenic 40.0%
TCTCCGTTGTTTGTATGTCA+TGG - chr3_3:74971286-74971305 Msa0472570:CDS 40.0%
CTCCGTTGTTTGTATGTCAT+GGG - chr3_3:74971287-74971306 Msa0472570:CDS 40.0%
GTCCCATGACATACAAACAA+CGG + chr3_3:74971292-74971311 None:intergenic 40.0%
GTTGTTTGTATGTCATGGGA+CGG - chr3_3:74971291-74971310 Msa0472570:CDS 40.0%
CATCCAGGGTAAAAATATGC+AGG - chr3_3:74971338-74971357 Msa0472570:CDS 40.0%
TTGAGTTCAGCTGAATGATG+CGG - chr3_3:74971518-74971537 Msa0472570:CDS 40.0%
! TGTAAACCTAGGATGGATTC+AGG - chr3_3:74971714-74971733 Msa0472570:intron 40.0%
! GTAAACCTAGGATGGATTCA+GGG - chr3_3:74971715-74971734 Msa0472570:intron 40.0%
CACCAAATCTATACTCGCAT+AGG + chr3_3:74971837-74971856 None:intergenic 40.0%
!! GAGTATAGATTTGGTGTCCT+CGG - chr3_3:74971841-74971860 Msa0472570:intron 40.0%
ACCTATTAGATCCCTTCATG+TGG + chr3_3:74971919-74971938 None:intergenic 40.0%
TTTCTTCTTCCTCCTTCTGT+GGG + chr3_3:74972006-74972025 None:intergenic 40.0%
! TTTTCTTCTTCCTCCTTCTG+TGG + chr3_3:74972007-74972026 None:intergenic 40.0%
ACTGGAGTTAGTGCAATGTA+AGG + chr3_3:74972272-74972291 None:intergenic 40.0%
!! AGGCTGTTTTACAGGTTGTT+CGG - chr3_3:74972296-74972315 Msa0472570:CDS 40.0%
CTGGTCAATTGCTTCAAACA+CGG + chr3_3:74972350-74972369 None:intergenic 40.0%
! GTTTGAAGCAATTGACCAGT+TGG - chr3_3:74972351-74972370 Msa0472570:intron 40.0%
AGCAATTGACCAGTTGGAAA+TGG - chr3_3:74972357-74972376 Msa0472570:intron 40.0%
! GTGTACTTCCTTTGTTTCAG+GGG - chr3_3:74972519-74972538 Msa0472570:intron 40.0%
ATTAACCTCCCCTGAAACAA+AGG + chr3_3:74972530-74972549 None:intergenic 40.0%
ACCCTCTCTACAAGAATGAA+AGG - chr3_3:74972651-74972670 Msa0472570:CDS 40.0%
AAAGCAGACAACATTGTCAG+AGG + chr3_3:74972922-74972941 None:intergenic 40.0%
AGGTTTGTGTGGAAGTTGAA+GGG + chr3_3:74971075-74971094 None:intergenic 40.0%
AAGGTTTGTGTGGAAGTTGA+AGG + chr3_3:74971076-74971095 None:intergenic 40.0%
AGGATGGAAAAAGGTTTGTG+TGG + chr3_3:74971086-74971105 None:intergenic 40.0%
TTCTCCTGTCAAGAATGTTG+TGG + chr3_3:74971181-74971200 None:intergenic 40.0%
ACAACATTCTTGACAGGAGA+AGG - chr3_3:74971180-74971199 Msa0472570:three_prime_UTR 40.0%
! TTTGGTTGTTGTTGTTGTGG+CGG + chr3_3:74971238-74971257 None:intergenic 40.0%
TCTCCGTTGTTTGTATGTCA+TGG - chr3_3:74971286-74971305 Msa0472570:CDS 40.0%
CTCCGTTGTTTGTATGTCAT+GGG - chr3_3:74971287-74971306 Msa0472570:CDS 40.0%
GTCCCATGACATACAAACAA+CGG + chr3_3:74971292-74971311 None:intergenic 40.0%
GTTGTTTGTATGTCATGGGA+CGG - chr3_3:74971291-74971310 Msa0472570:CDS 40.0%
CATCCAGGGTAAAAATATGC+AGG - chr3_3:74971338-74971357 Msa0472570:CDS 40.0%
TTGAGTTCAGCTGAATGATG+CGG - chr3_3:74971518-74971537 Msa0472570:CDS 40.0%
! TGTAAACCTAGGATGGATTC+AGG - chr3_3:74971714-74971733 Msa0472570:intron 40.0%
! GTAAACCTAGGATGGATTCA+GGG - chr3_3:74971715-74971734 Msa0472570:intron 40.0%
CACCAAATCTATACTCGCAT+AGG + chr3_3:74971837-74971856 None:intergenic 40.0%
!! GAGTATAGATTTGGTGTCCT+CGG - chr3_3:74971841-74971860 Msa0472570:intron 40.0%
ACCTATTAGATCCCTTCATG+TGG + chr3_3:74971919-74971938 None:intergenic 40.0%
TTTCTTCTTCCTCCTTCTGT+GGG + chr3_3:74972006-74972025 None:intergenic 40.0%
! TTTTCTTCTTCCTCCTTCTG+TGG + chr3_3:74972007-74972026 None:intergenic 40.0%
ACTGGAGTTAGTGCAATGTA+AGG + chr3_3:74972272-74972291 None:intergenic 40.0%
!! AGGCTGTTTTACAGGTTGTT+CGG - chr3_3:74972296-74972315 Msa0472570:CDS 40.0%
CTGGTCAATTGCTTCAAACA+CGG + chr3_3:74972350-74972369 None:intergenic 40.0%
! GTTTGAAGCAATTGACCAGT+TGG - chr3_3:74972351-74972370 Msa0472570:intron 40.0%
AGCAATTGACCAGTTGGAAA+TGG - chr3_3:74972357-74972376 Msa0472570:intron 40.0%
! GTGTACTTCCTTTGTTTCAG+GGG - chr3_3:74972519-74972538 Msa0472570:intron 40.0%
ATTAACCTCCCCTGAAACAA+AGG + chr3_3:74972530-74972549 None:intergenic 40.0%
ACCCTCTCTACAAGAATGAA+AGG - chr3_3:74972651-74972670 Msa0472570:CDS 40.0%
AAAGCAGACAACATTGTCAG+AGG + chr3_3:74972922-74972941 None:intergenic 40.0%
ATTCAACTGTGTCTCACACG+CGG + chr3_3:74970900-74970919 None:intergenic 45.0%
AAGAGGAGGAGGATGGAAAA+AGG + chr3_3:74971095-74971114 None:intergenic 45.0%
! GAGGAAGAGAGAGTACAGAA+AGG + chr3_3:74971125-74971144 None:intergenic 45.0%
TTTATGGAGGAAGGTAGAGG+AGG + chr3_3:74971144-74971163 None:intergenic 45.0%
GTCTTTATGGAGGAAGGTAG+AGG + chr3_3:74971147-74971166 None:intergenic 45.0%
! GACTTGGTCTTTATGGAGGA+AGG + chr3_3:74971153-74971172 None:intergenic 45.0%
CCTGTCAAGAATGTTGTGGA+GGG + chr3_3:74971177-74971196 None:intergenic 45.0%
TCCTGTCAAGAATGTTGTGG+AGG + chr3_3:74971178-74971197 None:intergenic 45.0%
ACATTCTTGACAGGAGAAGG+AGG - chr3_3:74971183-74971202 Msa0472570:three_prime_UTR 45.0%
! GCGTTTGGTTGTTGTTGTTG+TGG + chr3_3:74971241-74971260 None:intergenic 45.0%
GATGTGAGACTATCTACTCG+TGG - chr3_3:74971609-74971628 Msa0472570:intron 45.0%
CAGCTTTCTTTGAATGACCG+AGG + chr3_3:74971861-74971880 None:intergenic 45.0%
GCCACATGAAGGGATCTAAT+AGG - chr3_3:74971915-74971934 Msa0472570:CDS 45.0%
GGTATTGCCATTACCCACAA+AGG - chr3_3:74971955-74971974 Msa0472570:CDS 45.0%
TCCTCATCCTTTGTGGGTAA+TGG + chr3_3:74971965-74971984 None:intergenic 45.0%
ATTACCCACAAAGGATGAGG+AGG - chr3_3:74971964-74971983 Msa0472570:CDS 45.0%
TCATCCTCCTCATCCTTTGT+GGG + chr3_3:74971971-74971990 None:intergenic 45.0%
TTCATCCTCCTCATCCTTTG+TGG + chr3_3:74971972-74971991 None:intergenic 45.0%
AACTGAAATCTCCCCACAGA+AGG - chr3_3:74971991-74972010 Msa0472570:CDS 45.0%
TTCTTCTTCCTCCTTCTGTG+GGG + chr3_3:74972005-74972024 None:intergenic 45.0%
GCTTCAAACACGGTTAAAGG+AGG + chr3_3:74972340-74972359 None:intergenic 45.0%
CATGAGCAACCATTTCCAAC+TGG + chr3_3:74972369-74972388 None:intergenic 45.0%
! TACTTCCTTTGTTTCAGGGG+AGG - chr3_3:74972522-74972541 Msa0472570:intron 45.0%
TCTGCTTCACCGTTTCCTTT+GGG + chr3_3:74972595-74972614 None:intergenic 45.0%
ATCTGCTTCACCGTTTCCTT+TGG + chr3_3:74972596-74972615 None:intergenic 45.0%
! TTAGCCGGTTCAACCACTAT+AGG + chr3_3:74972628-74972647 None:intergenic 45.0%
TGTAGAGAGGGTTCTTTAGC+CGG + chr3_3:74972643-74972662 None:intergenic 45.0%
GTTATGTGCAGCACACTCAA+TGG + chr3_3:74972881-74972900 None:intergenic 45.0%
ATTCAACTGTGTCTCACACG+CGG + chr3_3:74970900-74970919 None:intergenic 45.0%
AAGAGGAGGAGGATGGAAAA+AGG + chr3_3:74971095-74971114 None:intergenic 45.0%
! GAGGAAGAGAGAGTACAGAA+AGG + chr3_3:74971125-74971144 None:intergenic 45.0%
TTTATGGAGGAAGGTAGAGG+AGG + chr3_3:74971144-74971163 None:intergenic 45.0%
GTCTTTATGGAGGAAGGTAG+AGG + chr3_3:74971147-74971166 None:intergenic 45.0%
! GACTTGGTCTTTATGGAGGA+AGG + chr3_3:74971153-74971172 None:intergenic 45.0%
CCTGTCAAGAATGTTGTGGA+GGG + chr3_3:74971177-74971196 None:intergenic 45.0%
TCCTGTCAAGAATGTTGTGG+AGG + chr3_3:74971178-74971197 None:intergenic 45.0%
ACATTCTTGACAGGAGAAGG+AGG - chr3_3:74971183-74971202 Msa0472570:three_prime_UTR 45.0%
! GCGTTTGGTTGTTGTTGTTG+TGG + chr3_3:74971241-74971260 None:intergenic 45.0%
GATGTGAGACTATCTACTCG+TGG - chr3_3:74971609-74971628 Msa0472570:intron 45.0%
CAGCTTTCTTTGAATGACCG+AGG + chr3_3:74971861-74971880 None:intergenic 45.0%
GCCACATGAAGGGATCTAAT+AGG - chr3_3:74971915-74971934 Msa0472570:CDS 45.0%
GGTATTGCCATTACCCACAA+AGG - chr3_3:74971955-74971974 Msa0472570:CDS 45.0%
TCCTCATCCTTTGTGGGTAA+TGG + chr3_3:74971965-74971984 None:intergenic 45.0%
ATTACCCACAAAGGATGAGG+AGG - chr3_3:74971964-74971983 Msa0472570:CDS 45.0%
TCATCCTCCTCATCCTTTGT+GGG + chr3_3:74971971-74971990 None:intergenic 45.0%
TTCATCCTCCTCATCCTTTG+TGG + chr3_3:74971972-74971991 None:intergenic 45.0%
AACTGAAATCTCCCCACAGA+AGG - chr3_3:74971991-74972010 Msa0472570:CDS 45.0%
TTCTTCTTCCTCCTTCTGTG+GGG + chr3_3:74972005-74972024 None:intergenic 45.0%
GCTTCAAACACGGTTAAAGG+AGG + chr3_3:74972340-74972359 None:intergenic 45.0%
CATGAGCAACCATTTCCAAC+TGG + chr3_3:74972369-74972388 None:intergenic 45.0%
! TACTTCCTTTGTTTCAGGGG+AGG - chr3_3:74972522-74972541 Msa0472570:intron 45.0%
TCTGCTTCACCGTTTCCTTT+GGG + chr3_3:74972595-74972614 None:intergenic 45.0%
ATCTGCTTCACCGTTTCCTT+TGG + chr3_3:74972596-74972615 None:intergenic 45.0%
! TTAGCCGGTTCAACCACTAT+AGG + chr3_3:74972628-74972647 None:intergenic 45.0%
TGTAGAGAGGGTTCTTTAGC+CGG + chr3_3:74972643-74972662 None:intergenic 45.0%
GTTATGTGCAGCACACTCAA+TGG + chr3_3:74972881-74972900 None:intergenic 45.0%
TTCAACTGTGTCTCACACGC+GGG + chr3_3:74970899-74970918 None:intergenic 50.0%
!! GGGTGACTTGGTCTTTATGG+AGG + chr3_3:74971157-74971176 None:intergenic 50.0%
!! GGAGGGTGACTTGGTCTTTA+TGG + chr3_3:74971160-74971179 None:intergenic 50.0%
GAATGTTGTGGAGGGTGACT+TGG + chr3_3:74971169-74971188 None:intergenic 50.0%
CCCTCCACAACATTCTTGAC+AGG - chr3_3:74971174-74971193 Msa0472570:three_prime_UTR 50.0%
ACAACAACAACCAAACGCCG+CGG - chr3_3:74971243-74971262 Msa0472570:CDS 50.0%
ACAGCACGTAGAGGAGAAAG+TGG - chr3_3:74971545-74971564 Msa0472570:CDS 50.0%
CAGCACGTAGAGGAGAAAGT+GGG - chr3_3:74971546-74971565 Msa0472570:CDS 50.0%
AGCACGTAGAGGAGAAAGTG+GGG - chr3_3:74971547-74971566 Msa0472570:CDS 50.0%
GTGAGACTATCTACTCGTGG+TGG - chr3_3:74971612-74971631 Msa0472570:intron 50.0%
AGACTATCTACTCGTGGTGG+AGG - chr3_3:74971615-74971634 Msa0472570:intron 50.0%
! ACTCGTGGTGGAGGAGAATT+TGG - chr3_3:74971624-74971643 Msa0472570:intron 50.0%
ACCTAGAACACGTAGATGCG+AGG - chr3_3:74971653-74971672 Msa0472570:intron 50.0%
ACCTCGCATCTACGTGTTCT+AGG + chr3_3:74971657-74971676 None:intergenic 50.0%
CAAGACCCTGAATCCATCCT+AGG + chr3_3:74971723-74971742 None:intergenic 50.0%
! GTTTACAAAGAGGCATGGGG+TGG - chr3_3:74971784-74971803 Msa0472570:intron 50.0%
TGATCATGGTCGCCACATGA+AGG - chr3_3:74971904-74971923 Msa0472570:CDS 50.0%
GATCATGGTCGCCACATGAA+GGG - chr3_3:74971905-74971924 Msa0472570:CDS 50.0%
GCCATTACCCACAAAGGATG+AGG - chr3_3:74971961-74971980 Msa0472570:CDS 50.0%
TGAAATCTCCCCACAGAAGG+AGG - chr3_3:74971994-74972013 Msa0472570:CDS 50.0%
TTGCACTAACTCCAGTTGCG+AGG - chr3_3:74972276-74972295 Msa0472570:CDS 50.0%
CTGTAAAACAGCCTCGCAAC+TGG + chr3_3:74972290-74972309 None:intergenic 50.0%
!! CAGTTGCGAGGCTGTTTTAC+AGG - chr3_3:74972288-74972307 Msa0472570:CDS 50.0%
GGAGCCTATAGTGGTTGAAC+CGG - chr3_3:74972621-74972640 Msa0472570:CDS 50.0%
TTCAACTGTGTCTCACACGC+GGG + chr3_3:74970899-74970918 None:intergenic 50.0%
!! GGGTGACTTGGTCTTTATGG+AGG + chr3_3:74971157-74971176 None:intergenic 50.0%
!! GGAGGGTGACTTGGTCTTTA+TGG + chr3_3:74971160-74971179 None:intergenic 50.0%
GAATGTTGTGGAGGGTGACT+TGG + chr3_3:74971169-74971188 None:intergenic 50.0%
CCCTCCACAACATTCTTGAC+AGG - chr3_3:74971174-74971193 Msa0472570:three_prime_UTR 50.0%
ACAACAACAACCAAACGCCG+CGG - chr3_3:74971243-74971262 Msa0472570:CDS 50.0%
ACAGCACGTAGAGGAGAAAG+TGG - chr3_3:74971545-74971564 Msa0472570:CDS 50.0%
CAGCACGTAGAGGAGAAAGT+GGG - chr3_3:74971546-74971565 Msa0472570:CDS 50.0%
AGCACGTAGAGGAGAAAGTG+GGG - chr3_3:74971547-74971566 Msa0472570:CDS 50.0%
GTGAGACTATCTACTCGTGG+TGG - chr3_3:74971612-74971631 Msa0472570:intron 50.0%
AGACTATCTACTCGTGGTGG+AGG - chr3_3:74971615-74971634 Msa0472570:intron 50.0%
! ACTCGTGGTGGAGGAGAATT+TGG - chr3_3:74971624-74971643 Msa0472570:intron 50.0%
ACCTAGAACACGTAGATGCG+AGG - chr3_3:74971653-74971672 Msa0472570:intron 50.0%
ACCTCGCATCTACGTGTTCT+AGG + chr3_3:74971657-74971676 None:intergenic 50.0%
CAAGACCCTGAATCCATCCT+AGG + chr3_3:74971723-74971742 None:intergenic 50.0%
! GTTTACAAAGAGGCATGGGG+TGG - chr3_3:74971784-74971803 Msa0472570:intron 50.0%
TGATCATGGTCGCCACATGA+AGG - chr3_3:74971904-74971923 Msa0472570:CDS 50.0%
GATCATGGTCGCCACATGAA+GGG - chr3_3:74971905-74971924 Msa0472570:CDS 50.0%
GCCATTACCCACAAAGGATG+AGG - chr3_3:74971961-74971980 Msa0472570:CDS 50.0%
TGAAATCTCCCCACAGAAGG+AGG - chr3_3:74971994-74972013 Msa0472570:CDS 50.0%
TTGCACTAACTCCAGTTGCG+AGG - chr3_3:74972276-74972295 Msa0472570:CDS 50.0%
CTGTAAAACAGCCTCGCAAC+TGG + chr3_3:74972290-74972309 None:intergenic 50.0%
!! CAGTTGCGAGGCTGTTTTAC+AGG - chr3_3:74972288-74972307 Msa0472570:CDS 50.0%
GGAGCCTATAGTGGTTGAAC+CGG - chr3_3:74972621-74972640 Msa0472570:CDS 50.0%
TTCCATCCTCCTCCTCTTCG+CGG - chr3_3:74971097-74971116 Msa0472570:three_prime_UTR 55.0%
!! TACAGAAAGGCACCGCGAAG+AGG + chr3_3:74971112-74971131 None:intergenic 55.0%
TGCGGTGAAACAGCACGTAG+AGG - chr3_3:74971536-74971555 Msa0472570:CDS 55.0%
GGTGGAGGAGAATTTGGTCG+AGG - chr3_3:74971630-74971649 Msa0472570:intron 55.0%
TTCCATCCTCCTCCTCTTCG+CGG - chr3_3:74971097-74971116 Msa0472570:three_prime_UTR 55.0%
!! TACAGAAAGGCACCGCGAAG+AGG + chr3_3:74971112-74971131 None:intergenic 55.0%
TGCGGTGAAACAGCACGTAG+AGG - chr3_3:74971536-74971555 Msa0472570:CDS 55.0%
GGTGGAGGAGAATTTGGTCG+AGG - chr3_3:74971630-74971649 Msa0472570:intron 55.0%
!! AGAAAGGCACCGCGAAGAGG+AGG + chr3_3:74971109-74971128 None:intergenic 60.0%
ACAACAACCAAACGCCGCGG+CGG - chr3_3:74971246-74971265 Msa0472570:CDS 60.0%
! CAAAGAGGCATGGGGTGGTG+CGG - chr3_3:74971789-74971808 Msa0472570:intron 60.0%
! AAAGAGGCATGGGGTGGTGC+GGG - chr3_3:74971790-74971809 Msa0472570:intron 60.0%
!! AGAAAGGCACCGCGAAGAGG+AGG + chr3_3:74971109-74971128 None:intergenic 60.0%
ACAACAACCAAACGCCGCGG+CGG - chr3_3:74971246-74971265 Msa0472570:CDS 60.0%
! CAAAGAGGCATGGGGTGGTG+CGG - chr3_3:74971789-74971808 Msa0472570:intron 60.0%
! AAAGAGGCATGGGGTGGTGC+GGG - chr3_3:74971790-74971809 Msa0472570:intron 60.0%
CACCGCGAAGAGGAGGAGGA+TGG + chr3_3:74971102-74971121 None:intergenic 65.0%
!! AAGGCACCGCGAAGAGGAGG+AGG + chr3_3:74971106-74971125 None:intergenic 65.0%
! GGTGCGGGCTGAGGAACATG+CGG - chr3_3:74971805-74971824 Msa0472570:intron 65.0%
CACCGCGAAGAGGAGGAGGA+TGG + chr3_3:74971102-74971121 None:intergenic 65.0%
!! AAGGCACCGCGAAGAGGAGG+AGG + chr3_3:74971106-74971125 None:intergenic 65.0%
! GGTGCGGGCTGAGGAACATG+CGG - chr3_3:74971805-74971824 Msa0472570:intron 65.0%
AAACGCCGCGGCGGCAGCAG+CGG - chr3_3:74971255-74971274 Msa0472570:CDS 75.0%
! GCATGGGGTGGTGCGGGCTG+AGG - chr3_3:74971796-74971815 Msa0472570:intron 75.0%
AAACGCCGCGGCGGCAGCAG+CGG - chr3_3:74971255-74971274 Msa0472570:CDS 75.0%
! GCATGGGGTGGTGCGGGCTG+AGG - chr3_3:74971796-74971815 Msa0472570:intron 75.0%
! GCTGCTGCCGCCGCGGCGTT+TGG + chr3_3:74971256-74971275 None:intergenic 80.0%
! AACCGCCGCTGCTGCCGCCG+CGG + chr3_3:74971263-74971282 None:intergenic 80.0%
! GCTGCTGCCGCCGCGGCGTT+TGG + chr3_3:74971256-74971275 None:intergenic 80.0%
! AACCGCCGCTGCTGCCGCCG+CGG + chr3_3:74971263-74971282 None:intergenic 80.0%
! CGCCGCGGCGGCAGCAGCGG+CGG - chr3_3:74971258-74971277 Msa0472570:CDS 90.0%
! CGCCGCGGCGGCAGCAGCGG+CGG - chr3_3:74971258-74971277 Msa0472570:CDS 90.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 74970876 74973020 74970876 ID=Msa0472570;Name=Msa0472570
chr3_3 mRNA 74970876 74973020 74970876 ID=Msa0472570-mRNA-1;Parent=Msa0472570;Name=Msa0472570-mRNA-1;_AED=0.08;_eAED=0.08;_QI=181|1|1|1|1|1|5|351|317
chr3_3 exon 74970876 74971357 74970876 ID=Msa0472570-mRNA-1:exon:19278;Parent=Msa0472570-mRNA-1
chr3_3 exon 74971478 74971586 74971478 ID=Msa0472570-mRNA-1:exon:19277;Parent=Msa0472570-mRNA-1
chr3_3 exon 74971857 74972120 74971857 ID=Msa0472570-mRNA-1:exon:19276;Parent=Msa0472570-mRNA-1
chr3_3 exon 74972222 74972368 74972222 ID=Msa0472570-mRNA-1:exon:19275;Parent=Msa0472570-mRNA-1
chr3_3 exon 74972537 74973020 74972537 ID=Msa0472570-mRNA-1:exon:19274;Parent=Msa0472570-mRNA-1
chr3_3 five_prime_UTR 74972840 74973020 74972840 ID=Msa0472570-mRNA-1:five_prime_utr;Parent=Msa0472570-mRNA-1
chr3_3 CDS 74972537 74972839 74972537 ID=Msa0472570-mRNA-1:cds;Parent=Msa0472570-mRNA-1
chr3_3 CDS 74972222 74972368 74972222 ID=Msa0472570-mRNA-1:cds;Parent=Msa0472570-mRNA-1
chr3_3 CDS 74971857 74972120 74971857 ID=Msa0472570-mRNA-1:cds;Parent=Msa0472570-mRNA-1
chr3_3 CDS 74971478 74971586 74971478 ID=Msa0472570-mRNA-1:cds;Parent=Msa0472570-mRNA-1
chr3_3 CDS 74971227 74971357 74971227 ID=Msa0472570-mRNA-1:cds;Parent=Msa0472570-mRNA-1
chr3_3 three_prime_UTR 74970876 74971226 74970876 ID=Msa0472570-mRNA-1:three_prime_utr;Parent=Msa0472570-mRNA-1
Gene Sequence

>Msa0472570

ATGTCAATGGCGACTCCCTTCAACTTCCACACAAACCTTTTTCCATCCTCCTCCTCTTCGCGGTGCCTTTCTGTACTCTCTCTTCCTCCTCTACCTTCCTCCATAAAGACCAAGTCACCCTCCACAACATTCTTGACAGGAGAAGGAGGCACATCACAGTTGCTGAAATTGAAGTATGCCGCCACAACAACAACAACCAAACGCCGCGGCGGCAGCAGCGGCGGTTCAGTCTCCGTTGTTTGTATGTCATGGGACGGTCCACTCTCTTCCGTCAAATTAATCATCCAGGGTAAAAATATGCAGCTGAATGATGCGGTGAAACAGCACGTAGAGGAGAAAGTGGGGAGAGCAGTTCAGAAGCACAGCTACTTAGTAAGAGAAGTTGATGTGAGACTATCTACTCGTGGTGGAGGAGAATTTGGTCGAGGACCTAGAACACGTAGATGCGAGGTTACTTTGTTTACAAAGAGGCATGGGGTGGTGCGGGCTGAGGAACATGCGGAAACTACCTATGCGAGTATAGATTTGGTGTCCTCGGTCATTCAAAGAAAGCTGAGAAAGATTAAGGAAAAAGAAACTGATCATGGTCGCCACATGAAGGGATCTAATAGGTTGAAATTTAGAGAGGCGGTATTGCCATTACCCACAAAGGATGAGGAGGATGAAACTGAAATCTCCCCACAGAAGGAGGAAGAAGAAAAACTTATTGAGGAGGTTGTTCGGACAAAATACTTTGACATGCCTCCTTTAACCGTGTTTGAAGCAATTGACCAGTTGGAAATGGTTGCTCATGACTTCTATGCTTTTCGAAATGAAGAATCTGGGGAGGTTAATATTGTATACAAAAGAAAAGAAGGAGGTTATGGACTCATTATTCCCAAAGGAAACGGTGAAGCAGATAAATTGGAGCCTATAGTGGTTGAACCGGCTAAAGAACCCTCTCTACAAGAATGA

Protein sequence

>Msa0472570

MSMATPFNFHTNLFPSSSSSRCLSVLSLPPLPSSIKTKSPSTTFLTGEGGTSQLLKLKYAATTTTTKRRGGSSGGSVSVVCMSWDGPLSSVKLIIQGKNMQLNDAVKQHVEEKVGRAVQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEEHAETTYASIDLVSSVIQRKLRKIKEKETDHGRHMKGSNRLKFREAVLPLPTKDEEDETEISPQKEEEEKLIEEVVRTKYFDMPPLTVFEAIDQLEMVAHDFYAFRNEESGEVNIVYKRKEGGYGLIIPKGNGEADKLEPIVVEPAKEPSLQE*