AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1410070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1410070 MtrunA17_Chr1g0160961 48.529 272 87 8 98 320 1317 1584 1.46e-56 197
Msa1410070 MtrunA17_Chr1g0160961 47.619 126 26 3 3 89 1035 1159 9.56e-24 102
Msa1410070 MtrunA17_Chr5g0419891 44.601 213 75 6 98 271 1193 1401 7.78e-35 134
Msa1410070 MtrunA17_Chr5g0419891 46.825 126 27 3 3 89 911 1035 4.11e-23 100
Msa1410070 MtrunA17_Chr5g0419881 61.667 60 13 2 271 320 11 70 8.23e-15 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1410070 AT4G38440.1 30.165 242 138 6 98 308 1207 1448 2.95e-20 92.0

Find 92 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAATCATTGATTTGTTAT+TGG 0.162023 tig0023613:+55263 Msa1410070:three_prime_UTR
GCAGGATAATGAAGATATTT+TGG 0.185566 tig0023613:+54451 Msa1410070:intron
GAAGCTTTACAGGATCTTTA+TGG 0.205527 tig0023613:+53642 Msa1410070:CDS
ACAATTAAAGGTTATTAAAA+AGG 0.219657 tig0023613:+55346 Msa1410070:three_prime_UTR
TGAAGTATTTGTACAAAATC+AGG 0.279723 tig0023613:+53606 Msa1410070:CDS
TTATCTATCGATTTCCTTGT+TGG 0.306983 tig0023613:+53580 Msa1410070:CDS
TGATGGAAATTCCTCTCTTC+TGG 0.319956 tig0023613:+54870 Msa1410070:CDS
AACGGCAGGACCTGGGGATA+TGG 0.347297 tig0023613:+53329 Msa1410070:CDS
ATTAGATGATAAATTCTATA+TGG 0.375938 tig0023613:+55114 Msa1410070:three_prime_UTR
ATAAGTTATTGTTGCGCAAC+AGG 0.376055 tig0023613:+54594 Msa1410070:CDS
CTTGACAGGGCCGCGATTTG+AGG 0.381522 tig0023613:+54506 Msa1410070:CDS
GTGTAGAGTGAAACAATTAA+AGG 0.386843 tig0023613:+55334 Msa1410070:three_prime_UTR
TGTTGCGCAACAGGCTTGTT+GGG 0.389869 tig0023613:+54603 Msa1410070:CDS
TCTGAAGGTAACAAAAGTTC+AGG 0.392103 tig0023613:-53885 None:intergenic
TGCATTAGACAGTGTATTCC+AGG 0.402474 tig0023613:-53856 None:intergenic
GGCAGTGTTGTTCCGTTGAA+TGG 0.404727 tig0023613:-53292 None:intergenic
CCAACTCCCACACCTGGAAT+TGG 0.406541 tig0023613:-53150 None:intergenic
TAGTGAATAATTCAAATCCT+TGG 0.413378 tig0023613:+55453 Msa1410070:three_prime_UTR
TGCCTTGGAACTATGTTTAA+CGG 0.418040 tig0023613:+53311 Msa1410070:CDS
AGGTTTCTGATGCCCTTGAC+AGG 0.426561 tig0023613:+54492 Msa1410070:intron
TGCAGAGGAGGACCAATTCC+AGG 0.427136 tig0023613:+53138 Msa1410070:CDS
GTGACATCTGTATTCCTTGA+TGG 0.433176 tig0023613:+55007 Msa1410070:three_prime_UTR
TTGTTGCGCAACAGGCTTGT+TGG 0.433583 tig0023613:+54602 Msa1410070:CDS
ATTCCATTCGACTTGCCACC+TGG 0.439426 tig0023613:+53838 Msa1410070:CDS
TATTCCTTGATGGAATGATA+TGG 0.442697 tig0023613:+55017 Msa1410070:three_prime_UTR
AGTGAATAATTCAAATCCTT+GGG 0.466319 tig0023613:+55454 Msa1410070:three_prime_UTR
GGAGGGGTAAAGAAGCCTTT+AGG 0.470941 tig0023613:+53439 Msa1410070:CDS
CTATGTTTAACGGCAGGACC+TGG 0.475194 tig0023613:+53321 Msa1410070:CDS
GTTGTTATAGAGAGACCATT+GGG 0.482895 tig0023613:+53351 Msa1410070:CDS
CTCAAATCGCGGCCCTGTCA+AGG 0.484116 tig0023613:-54505 None:intergenic
TCTGCATAACATCAATTCAA+TGG 0.493057 tig0023613:-53121 None:intergenic
CACACATTGCTGCGACCTAA+AGG 0.500386 tig0023613:-53454 None:intergenic
CAGGTATGAAATATGAATGA+TGG 0.502337 tig0023613:-54563 None:intergenic
TAAATATAATGAAACTTGCC+AGG 0.506774 tig0023613:-53801 None:intergenic
CTCTCTTTGAGAGATTATGC+TGG 0.521446 tig0023613:+54627 Msa1410070:CDS
TCAACGGAACAACACTGCCT+TGG 0.522841 tig0023613:+53296 Msa1410070:CDS
ATTGCATCACAAAATCTTGA+CGG 0.529455 tig0023613:-55040 None:intergenic
GAAGTATTTGTACAAAATCA+GGG 0.529854 tig0023613:+53607 Msa1410070:CDS
GTTGTTCCGTTGAATGGTAT+AGG 0.530174 tig0023613:-53286 None:intergenic
AATGGCTTATATAATCATGA+TGG 0.530269 tig0023613:+55290 Msa1410070:three_prime_UTR
ACGTACTGACTGGAGGGTAG+TGG 0.532760 tig0023613:+54981 Msa1410070:three_prime_UTR
AAATTCCTCTCTTCTGGCAC+AGG 0.533778 tig0023613:+54876 Msa1410070:CDS
ATTTGTTTAAACGTACTGAC+TGG 0.538560 tig0023613:+54971 Msa1410070:three_prime_UTR
GGTTGTTATAGAGAGACCAT+TGG 0.546544 tig0023613:+53350 Msa1410070:CDS
GGCACAGGTGAACAAGTTGA+AGG 0.548409 tig0023613:+54891 Msa1410070:CDS
TATGTTTAACGGCAGGACCT+GGG 0.549650 tig0023613:+53322 Msa1410070:CDS
TTGGAACTATGTTTAACGGC+AGG 0.552638 tig0023613:+53315 Msa1410070:CDS
CCCGAAAAGCATTTCTCTGA+AGG 0.552673 tig0023613:-53900 None:intergenic
CGCAACAATAACTTATCCAC+AGG 0.553250 tig0023613:-54587 None:intergenic
TAGTAGGTGTTATCTGCCCA+AGG 0.558616 tig0023613:-55470 None:intergenic
TCTCTTTGAGAGATTATGCT+GGG 0.563044 tig0023613:+54628 Msa1410070:CDS
CAAGCAATCAACATCTGACA+TGG 0.564410 tig0023613:+54804 Msa1410070:CDS
TCAAATCGCGGCCCTGTCAA+GGG 0.565264 tig0023613:-54504 None:intergenic
CATGGATGAAAAGAGTTGGT+TGG 0.567021 tig0023613:+54822 Msa1410070:CDS
ATTCCAGGTGGCAAGTCGAA+TGG 0.569750 tig0023613:-53841 None:intergenic
CGTACTGACTGGAGGGTAGT+GGG 0.572190 tig0023613:+54982 Msa1410070:three_prime_UTR
GGAGTTGAAAGAATTGATTG+AGG 0.579313 tig0023613:+54843 Msa1410070:CDS
GGTTTCTGATGCCCTTGACA+GGG 0.580132 tig0023613:+54493 Msa1410070:intron
CAATAACTTATCCACAGGAC+AGG 0.581405 tig0023613:-54582 None:intergenic
TTTATTAGTACGTCTATCGA+CGG 0.590374 tig0023613:+55087 Msa1410070:three_prime_UTR
TTATTAGTACGTCTATCGAC+GGG 0.590685 tig0023613:+55088 Msa1410070:three_prime_UTR
TCTATAACAACCATATCCCC+AGG 0.591618 tig0023613:-53339 None:intergenic
AAATGATTCCATAGCTACAC+GGG 0.597241 tig0023613:+55163 Msa1410070:three_prime_UTR
GAATTGATTGAGGCATGTGA+TGG 0.598135 tig0023613:+54853 Msa1410070:CDS
TCATGATGGATATTTGTACA+TGG 0.599230 tig0023613:+55304 Msa1410070:three_prime_UTR
CAGATGTTGATTGCTTGCTA+TGG 0.601126 tig0023613:-54798 None:intergenic
GAATTGATGTTATGCAGAGG+AGG 0.602718 tig0023613:+53126 Msa1410070:CDS
TGCCGTTAAACATAGTTCCA+AGG 0.606781 tig0023613:-53313 None:intergenic
TGTCTTCAACTTCTTCAGTG+TGG 0.611666 tig0023613:+53085 Msa1410070:CDS
CATATTTCATACCTGTCCTG+TGG 0.618580 tig0023613:+54571 Msa1410070:CDS
TATGAAATATGAATGATGGA+AGG 0.618796 tig0023613:-54559 None:intergenic
TGTTTAAACGTACTGACTGG+AGG 0.621407 tig0023613:+54974 Msa1410070:three_prime_UTR
GTTTAAACGTACTGACTGGA+GGG 0.621831 tig0023613:+54975 Msa1410070:three_prime_UTR
ATGTTTAACGGCAGGACCTG+GGG 0.629545 tig0023613:+53323 Msa1410070:CDS
GTTCACCTGTGCCAGAAGAG+AGG 0.629884 tig0023613:-54881 None:intergenic
ACGGCCATATCATTCCATCA+AGG 0.632803 tig0023613:-55021 None:intergenic
GAAATGATTCCATAGCTACA+CGG 0.633912 tig0023613:+55162 Msa1410070:three_prime_UTR
AGACGACCTATACCATTCAA+CGG 0.636788 tig0023613:+53280 Msa1410070:CDS
AGGATACCTTGAACCTGCAG+AGG 0.638345 tig0023613:+53929 Msa1410070:CDS
CAAATACTTCAATTCCAACA+AGG 0.642031 tig0023613:-53594 None:intergenic
TGCAAATGATCCTCAAATCG+CGG 0.643658 tig0023613:-54516 None:intergenic
CTGACATGGATGAAAAGAGT+TGG 0.644103 tig0023613:+54818 Msa1410070:CDS
TGCTGGGAAACAGCAACATG+AGG 0.645299 tig0023613:+54644 Msa1410070:CDS
ACATGGAACAATAAACCCAA+TGG 0.645346 tig0023613:-53366 None:intergenic
ATTGAATTGATGTTATGCAG+AGG 0.645749 tig0023613:+53123 Msa1410070:CDS
TATTTGTACAAAATCAGGGT+GGG 0.645769 tig0023613:+53611 Msa1410070:CDS
AGTACTTCAAAACAGAGACA+TGG 0.650829 tig0023613:-53383 None:intergenic
ATATGAATGATGGAAGGCGA+TGG 0.651810 tig0023613:-54553 None:intergenic
TGAGAAAATTCTGTGTACAG+AGG 0.700326 tig0023613:-53410 None:intergenic
ATTAGACAGTGTATTCCAGG+TGG 0.740325 tig0023613:-53853 None:intergenic
GTATTTGTACAAAATCAGGG+TGG 0.744705 tig0023613:+53610 Msa1410070:CDS
TCGAATGGAATTCAACACAG+CGG 0.801275 tig0023613:-53826 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CCAAAATAATTTGTTTATTT+TGG - tig0023613:53695-53714 None:intergenic 15.0%
!!! CCAAAATAAACAAATTATTT+TGG + tig0023613:53692-53711 Msa1410070:intron 15.0%
!! TATATACTTAATTGAGAATA+TGG + tig0023613:54074-54093 Msa1410070:intron 15.0%
!! ATATACTTAATTGAGAATAT+GGG + tig0023613:54075-54094 Msa1410070:intron 15.0%
!! AAAAAATTGGTAAAAGTTAT+TGG + tig0023613:54173-54192 Msa1410070:intron 15.0%
!!! CTTATTTTATAGATAATGTT+AGG + tig0023613:54364-54383 Msa1410070:intron 15.0%
!! ATTAGATGATAAATTCTATA+TGG + tig0023613:55114-55133 Msa1410070:three_prime_UTR 15.0%
!!! TTTAATCATTGATTTGTTAT+TGG + tig0023613:55263-55282 Msa1410070:three_prime_UTR 15.0%
!! ACAATTAAAGGTTATTAAAA+AGG + tig0023613:55346-55365 Msa1410070:three_prime_UTR 15.0%
!!! CCAAAATAATTTGTTTATTT+TGG - tig0023613:53695-53714 None:intergenic 15.0%
!!! CCAAAATAAACAAATTATTT+TGG + tig0023613:53692-53711 Msa1410070:intron 15.0%
!! TATATACTTAATTGAGAATA+TGG + tig0023613:54074-54093 Msa1410070:intron 15.0%
!! ATATACTTAATTGAGAATAT+GGG + tig0023613:54075-54094 Msa1410070:intron 15.0%
!! AAAAAATTGGTAAAAGTTAT+TGG + tig0023613:54173-54192 Msa1410070:intron 15.0%
!!! CTTATTTTATAGATAATGTT+AGG + tig0023613:54364-54383 Msa1410070:intron 15.0%
!! ATTAGATGATAAATTCTATA+TGG + tig0023613:55114-55133 Msa1410070:three_prime_UTR 15.0%
!!! TTTAATCATTGATTTGTTAT+TGG + tig0023613:55263-55282 Msa1410070:three_prime_UTR 15.0%
!! ACAATTAAAGGTTATTAAAA+AGG + tig0023613:55346-55365 Msa1410070:three_prime_UTR 15.0%
!! TTCAAAAACTTAAAGTAAGT+AGG - tig0023613:53247-53266 None:intergenic 20.0%
!!! AAATTCTTTAAAGCGTTAAA+AGG + tig0023613:54198-54217 Msa1410070:intron 20.0%
!!! ATTTTATAGATAATGTTAGG+TGG + tig0023613:54367-54386 Msa1410070:intron 20.0%
!!! TTTTATAGATAATGTTAGGT+GGG + tig0023613:54368-54387 Msa1410070:intron 20.0%
!! TCAACATAATCAATATTGTT+TGG - tig0023613:54423-54442 None:intergenic 20.0%
!!! TGTATCTTATTTGTTCTTAT+TGG + tig0023613:54723-54742 Msa1410070:intron 20.0%
!!! TGATTTGTTATTGGTAAAAA+TGG + tig0023613:55272-55291 Msa1410070:three_prime_UTR 20.0%
!! TTCAAAAACTTAAAGTAAGT+AGG - tig0023613:53247-53266 None:intergenic 20.0%
!!! AAATTCTTTAAAGCGTTAAA+AGG + tig0023613:54198-54217 Msa1410070:intron 20.0%
!!! ATTTTATAGATAATGTTAGG+TGG + tig0023613:54367-54386 Msa1410070:intron 20.0%
!!! TTTTATAGATAATGTTAGGT+GGG + tig0023613:54368-54387 Msa1410070:intron 20.0%
!! TCAACATAATCAATATTGTT+TGG - tig0023613:54423-54442 None:intergenic 20.0%
!!! TGTATCTTATTTGTTCTTAT+TGG + tig0023613:54723-54742 Msa1410070:intron 20.0%
!!! TGATTTGTTATTGGTAAAAA+TGG + tig0023613:55272-55291 Msa1410070:three_prime_UTR 20.0%
!! TGATAATGCTAAATAGGAAA+AGG - tig0023613:53539-53558 None:intergenic 25.0%
!! TGTCAATGATAATGCTAAAT+AGG - tig0023613:53545-53564 None:intergenic 25.0%
! ATTTAGCATTATCATTGACA+TGG + tig0023613:53545-53564 Msa1410070:intron 25.0%
!! TGAAGTATTTGTACAAAATC+AGG + tig0023613:53606-53625 Msa1410070:CDS 25.0%
!! GAAGTATTTGTACAAAATCA+GGG + tig0023613:53607-53626 Msa1410070:CDS 25.0%
! TAAATATAATGAAACTTGCC+AGG - tig0023613:53804-53823 None:intergenic 25.0%
! GCATAAGAAATATTCTATGT+AGG - tig0023613:53997-54016 None:intergenic 25.0%
! CTTGAATCAAAGCAAAAAAT+TGG + tig0023613:54160-54179 Msa1410070:intron 25.0%
! ATCTAACTAAGAGATACTAA+AGG - tig0023613:54248-54267 None:intergenic 25.0%
! TTTATAGATAATGTTAGGTG+GGG + tig0023613:54369-54388 Msa1410070:intron 25.0%
!! TATGAAATATGAATGATGGA+AGG - tig0023613:54562-54581 None:intergenic 25.0%
!! TTTCTTTTTGCGAAATAGTA+TGG - tig0023613:55146-55165 None:intergenic 25.0%
! AATGGCTTATATAATCATGA+TGG + tig0023613:55290-55309 Msa1410070:three_prime_UTR 25.0%
!! TTGCTACTCTAAAAAAAACT+CGG - tig0023613:55428-55447 None:intergenic 25.0%
! TAGTGAATAATTCAAATCCT+TGG + tig0023613:55453-55472 Msa1410070:three_prime_UTR 25.0%
! AGTGAATAATTCAAATCCTT+GGG + tig0023613:55454-55473 Msa1410070:three_prime_UTR 25.0%
!! TGATAATGCTAAATAGGAAA+AGG - tig0023613:53539-53558 None:intergenic 25.0%
!! TGTCAATGATAATGCTAAAT+AGG - tig0023613:53545-53564 None:intergenic 25.0%
! ATTTAGCATTATCATTGACA+TGG + tig0023613:53545-53564 Msa1410070:intron 25.0%
!! TGAAGTATTTGTACAAAATC+AGG + tig0023613:53606-53625 Msa1410070:CDS 25.0%
!! GAAGTATTTGTACAAAATCA+GGG + tig0023613:53607-53626 Msa1410070:CDS 25.0%
! TAAATATAATGAAACTTGCC+AGG - tig0023613:53804-53823 None:intergenic 25.0%
! GCATAAGAAATATTCTATGT+AGG - tig0023613:53997-54016 None:intergenic 25.0%
! CTTGAATCAAAGCAAAAAAT+TGG + tig0023613:54160-54179 Msa1410070:intron 25.0%
! ATCTAACTAAGAGATACTAA+AGG - tig0023613:54248-54267 None:intergenic 25.0%
! TTTATAGATAATGTTAGGTG+GGG + tig0023613:54369-54388 Msa1410070:intron 25.0%
!! TATGAAATATGAATGATGGA+AGG - tig0023613:54562-54581 None:intergenic 25.0%
!! TTTCTTTTTGCGAAATAGTA+TGG - tig0023613:55146-55165 None:intergenic 25.0%
! AATGGCTTATATAATCATGA+TGG + tig0023613:55290-55309 Msa1410070:three_prime_UTR 25.0%
!! TTGCTACTCTAAAAAAAACT+CGG - tig0023613:55428-55447 None:intergenic 25.0%
! TAGTGAATAATTCAAATCCT+TGG + tig0023613:55453-55472 Msa1410070:three_prime_UTR 25.0%
! AGTGAATAATTCAAATCCTT+GGG + tig0023613:55454-55473 Msa1410070:three_prime_UTR 25.0%
TCTGCATAACATCAATTCAA+TGG - tig0023613:53124-53143 None:intergenic 30.0%
ATTGAATTGATGTTATGCAG+AGG + tig0023613:53123-53142 Msa1410070:CDS 30.0%
AAATCTTGCATCTGTTTGAA+AGG - tig0023613:53220-53239 None:intergenic 30.0%
!!! TGTGGACTTTTCTTTGTTTT+AGG + tig0023613:53473-53492 Msa1410070:intron 30.0%
! GAAACAATGTCCAATTTTCA+AGG + tig0023613:53500-53519 Msa1410070:intron 30.0%
!! TTATCTATCGATTTCCTTGT+TGG + tig0023613:53580-53599 Msa1410070:CDS 30.0%
CAAATACTTCAATTCCAACA+AGG - tig0023613:53597-53616 None:intergenic 30.0%
TATTTGTACAAAATCAGGGT+GGG + tig0023613:53611-53630 Msa1410070:CDS 30.0%
! TAATTATGTTTTACCTCTGC+AGG - tig0023613:53945-53964 None:intergenic 30.0%
TCTTAGTTAGATTTAGCTGT+TGG + tig0023613:54256-54275 Msa1410070:intron 30.0%
CTTAGTTAGATTTAGCTGTT+GGG + tig0023613:54257-54276 Msa1410070:intron 30.0%
!! ATGAACTTGAAGAGTATTCA+AGG + tig0023613:54293-54312 Msa1410070:intron 30.0%
! GCAGGATAATGAAGATATTT+TGG + tig0023613:54451-54470 Msa1410070:intron 30.0%
!! GGATAATGAAGATATTTTGG+AGG + tig0023613:54454-54473 Msa1410070:intron 30.0%
CAGGTATGAAATATGAATGA+TGG - tig0023613:54566-54585 None:intergenic 30.0%
! ATTTGTTTAAACGTACTGAC+TGG + tig0023613:54971-54990 Msa1410070:three_prime_UTR 30.0%
TATTCCTTGATGGAATGATA+TGG + tig0023613:55017-55036 Msa1410070:three_prime_UTR 30.0%
ATTGCATCACAAAATCTTGA+CGG - tig0023613:55043-55062 None:intergenic 30.0%
TTTATTAGTACGTCTATCGA+CGG + tig0023613:55087-55106 Msa1410070:three_prime_UTR 30.0%
!! TCATGATGGATATTTGTACA+TGG + tig0023613:55304-55323 Msa1410070:three_prime_UTR 30.0%
GTGTAGAGTGAAACAATTAA+AGG + tig0023613:55334-55353 Msa1410070:three_prime_UTR 30.0%
TCTGCATAACATCAATTCAA+TGG - tig0023613:53124-53143 None:intergenic 30.0%
ATTGAATTGATGTTATGCAG+AGG + tig0023613:53123-53142 Msa1410070:CDS 30.0%
AAATCTTGCATCTGTTTGAA+AGG - tig0023613:53220-53239 None:intergenic 30.0%
!!! TGTGGACTTTTCTTTGTTTT+AGG + tig0023613:53473-53492 Msa1410070:intron 30.0%
! GAAACAATGTCCAATTTTCA+AGG + tig0023613:53500-53519 Msa1410070:intron 30.0%
!! TTATCTATCGATTTCCTTGT+TGG + tig0023613:53580-53599 Msa1410070:CDS 30.0%
CAAATACTTCAATTCCAACA+AGG - tig0023613:53597-53616 None:intergenic 30.0%
TATTTGTACAAAATCAGGGT+GGG + tig0023613:53611-53630 Msa1410070:CDS 30.0%
! TAATTATGTTTTACCTCTGC+AGG - tig0023613:53945-53964 None:intergenic 30.0%
TCTTAGTTAGATTTAGCTGT+TGG + tig0023613:54256-54275 Msa1410070:intron 30.0%
CTTAGTTAGATTTAGCTGTT+GGG + tig0023613:54257-54276 Msa1410070:intron 30.0%
!! ATGAACTTGAAGAGTATTCA+AGG + tig0023613:54293-54312 Msa1410070:intron 30.0%
! GCAGGATAATGAAGATATTT+TGG + tig0023613:54451-54470 Msa1410070:intron 30.0%
!! GGATAATGAAGATATTTTGG+AGG + tig0023613:54454-54473 Msa1410070:intron 30.0%
CAGGTATGAAATATGAATGA+TGG - tig0023613:54566-54585 None:intergenic 30.0%
! ATTTGTTTAAACGTACTGAC+TGG + tig0023613:54971-54990 Msa1410070:three_prime_UTR 30.0%
TATTCCTTGATGGAATGATA+TGG + tig0023613:55017-55036 Msa1410070:three_prime_UTR 30.0%
ATTGCATCACAAAATCTTGA+CGG - tig0023613:55043-55062 None:intergenic 30.0%
TTTATTAGTACGTCTATCGA+CGG + tig0023613:55087-55106 Msa1410070:three_prime_UTR 30.0%
!! TCATGATGGATATTTGTACA+TGG + tig0023613:55304-55323 Msa1410070:three_prime_UTR 30.0%
GTGTAGAGTGAAACAATTAA+AGG + tig0023613:55334-55353 Msa1410070:three_prime_UTR 30.0%
TGCCTTGGAACTATGTTTAA+CGG + tig0023613:53311-53330 Msa1410070:CDS 35.0%
GTTGTTATAGAGAGACCATT+GGG + tig0023613:53351-53370 Msa1410070:CDS 35.0%
ACATGGAACAATAAACCCAA+TGG - tig0023613:53369-53388 None:intergenic 35.0%
AGTACTTCAAAACAGAGACA+TGG - tig0023613:53386-53405 None:intergenic 35.0%
TGAGAAAATTCTGTGTACAG+AGG - tig0023613:53413-53432 None:intergenic 35.0%
GTTGTCAGTTCCTTGAAAAT+TGG - tig0023613:53513-53532 None:intergenic 35.0%
GTATTTGTACAAAATCAGGG+TGG + tig0023613:53610-53629 Msa1410070:CDS 35.0%
!!! GGATACTTTTGAAGCTTTAC+AGG + tig0023613:53632-53651 Msa1410070:CDS 35.0%
GAAGCTTTACAGGATCTTTA+TGG + tig0023613:53642-53661 Msa1410070:CDS 35.0%
TCTGAAGGTAACAAAAGTTC+AGG - tig0023613:53888-53907 None:intergenic 35.0%
! ACCTTCAGAGAAATGCTTTT+CGG + tig0023613:53899-53918 Msa1410070:CDS 35.0%
!! AAAAAGCATCTACTGTACTC+TGG - tig0023613:54138-54157 None:intergenic 35.0%
!! ACTTGAAGAGTATTCAAGGA+TGG + tig0023613:54297-54316 Msa1410070:intron 35.0%
!! CTTGAAGAGTATTCAAGGAT+GGG + tig0023613:54298-54317 Msa1410070:intron 35.0%
!! TTGAAGAGTATTCAAGGATG+GGG + tig0023613:54299-54318 Msa1410070:intron 35.0%
TGTTTGGTACAACTACGTTA+GGG - tig0023613:54407-54426 None:intergenic 35.0%
TTGTTTGGTACAACTACGTT+AGG - tig0023613:54408-54427 None:intergenic 35.0%
ATATCTTCATTATCCTGCAG+TGG - tig0023613:54449-54468 None:intergenic 35.0%
ATAAGTTATTGTTGCGCAAC+AGG + tig0023613:54594-54613 Msa1410070:CDS 35.0%
! TCTCTTTGAGAGATTATGCT+GGG + tig0023613:54628-54647 Msa1410070:CDS 35.0%
! TTTTGAATGCTTTTCCCTGA+TGG + tig0023613:54675-54694 Msa1410070:intron 35.0%
!!! TTTTCCCTGATGGATTAAGA+TGG + tig0023613:54685-54704 Msa1410070:intron 35.0%
TCTTCCATCTTAATCCATCA+GGG - tig0023613:54692-54711 None:intergenic 35.0%
ATCTTCCATCTTAATCCATC+AGG - tig0023613:54693-54712 None:intergenic 35.0%
ACTGATCCAATTTGTGTTAC+AGG + tig0023613:54753-54772 Msa1410070:intron 35.0%
CTGATCCAATTTGTGTTACA+GGG + tig0023613:54754-54773 Msa1410070:intron 35.0%
ACATTCCCTGTAACACAAAT+TGG - tig0023613:54762-54781 None:intergenic 35.0%
GGAGTTGAAAGAATTGATTG+AGG + tig0023613:54843-54862 Msa1410070:CDS 35.0%
! AAGATTTTGTGATGCAATGC+TGG + tig0023613:55045-55064 Msa1410070:three_prime_UTR 35.0%
TTATTAGTACGTCTATCGAC+GGG + tig0023613:55088-55107 Msa1410070:three_prime_UTR 35.0%
GAAATGATTCCATAGCTACA+CGG + tig0023613:55162-55181 Msa1410070:three_prime_UTR 35.0%
AAATGATTCCATAGCTACAC+GGG + tig0023613:55163-55182 Msa1410070:three_prime_UTR 35.0%
TGCCTTGGAACTATGTTTAA+CGG + tig0023613:53311-53330 Msa1410070:CDS 35.0%
GTTGTTATAGAGAGACCATT+GGG + tig0023613:53351-53370 Msa1410070:CDS 35.0%
ACATGGAACAATAAACCCAA+TGG - tig0023613:53369-53388 None:intergenic 35.0%
AGTACTTCAAAACAGAGACA+TGG - tig0023613:53386-53405 None:intergenic 35.0%
TGAGAAAATTCTGTGTACAG+AGG - tig0023613:53413-53432 None:intergenic 35.0%
GTTGTCAGTTCCTTGAAAAT+TGG - tig0023613:53513-53532 None:intergenic 35.0%
GTATTTGTACAAAATCAGGG+TGG + tig0023613:53610-53629 Msa1410070:CDS 35.0%
!!! GGATACTTTTGAAGCTTTAC+AGG + tig0023613:53632-53651 Msa1410070:CDS 35.0%
GAAGCTTTACAGGATCTTTA+TGG + tig0023613:53642-53661 Msa1410070:CDS 35.0%
TCTGAAGGTAACAAAAGTTC+AGG - tig0023613:53888-53907 None:intergenic 35.0%
! ACCTTCAGAGAAATGCTTTT+CGG + tig0023613:53899-53918 Msa1410070:CDS 35.0%
!! AAAAAGCATCTACTGTACTC+TGG - tig0023613:54138-54157 None:intergenic 35.0%
!! ACTTGAAGAGTATTCAAGGA+TGG + tig0023613:54297-54316 Msa1410070:intron 35.0%
!! CTTGAAGAGTATTCAAGGAT+GGG + tig0023613:54298-54317 Msa1410070:intron 35.0%
!! TTGAAGAGTATTCAAGGATG+GGG + tig0023613:54299-54318 Msa1410070:intron 35.0%
TGTTTGGTACAACTACGTTA+GGG - tig0023613:54407-54426 None:intergenic 35.0%
TTGTTTGGTACAACTACGTT+AGG - tig0023613:54408-54427 None:intergenic 35.0%
ATATCTTCATTATCCTGCAG+TGG - tig0023613:54449-54468 None:intergenic 35.0%
ATAAGTTATTGTTGCGCAAC+AGG + tig0023613:54594-54613 Msa1410070:CDS 35.0%
! TCTCTTTGAGAGATTATGCT+GGG + tig0023613:54628-54647 Msa1410070:CDS 35.0%
! TTTTGAATGCTTTTCCCTGA+TGG + tig0023613:54675-54694 Msa1410070:intron 35.0%
!!! TTTTCCCTGATGGATTAAGA+TGG + tig0023613:54685-54704 Msa1410070:intron 35.0%
TCTTCCATCTTAATCCATCA+GGG - tig0023613:54692-54711 None:intergenic 35.0%
ATCTTCCATCTTAATCCATC+AGG - tig0023613:54693-54712 None:intergenic 35.0%
ACTGATCCAATTTGTGTTAC+AGG + tig0023613:54753-54772 Msa1410070:intron 35.0%
CTGATCCAATTTGTGTTACA+GGG + tig0023613:54754-54773 Msa1410070:intron 35.0%
ACATTCCCTGTAACACAAAT+TGG - tig0023613:54762-54781 None:intergenic 35.0%
GGAGTTGAAAGAATTGATTG+AGG + tig0023613:54843-54862 Msa1410070:CDS 35.0%
! AAGATTTTGTGATGCAATGC+TGG + tig0023613:55045-55064 Msa1410070:three_prime_UTR 35.0%
TTATTAGTACGTCTATCGAC+GGG + tig0023613:55088-55107 Msa1410070:three_prime_UTR 35.0%
GAAATGATTCCATAGCTACA+CGG + tig0023613:55162-55181 Msa1410070:three_prime_UTR 35.0%
AAATGATTCCATAGCTACAC+GGG + tig0023613:55163-55182 Msa1410070:three_prime_UTR 35.0%
TGTCTTCAACTTCTTCAGTG+TGG + tig0023613:53085-53104 Msa1410070:CDS 40.0%
GAATTGATGTTATGCAGAGG+AGG + tig0023613:53126-53145 Msa1410070:CDS 40.0%
AGACGACCTATACCATTCAA+CGG + tig0023613:53280-53299 Msa1410070:CDS 40.0%
GTTGTTCCGTTGAATGGTAT+AGG - tig0023613:53289-53308 None:intergenic 40.0%
TGCCGTTAAACATAGTTCCA+AGG - tig0023613:53316-53335 None:intergenic 40.0%
TTGGAACTATGTTTAACGGC+AGG + tig0023613:53315-53334 Msa1410070:CDS 40.0%
TCTATAACAACCATATCCCC+AGG - tig0023613:53342-53361 None:intergenic 40.0%
GGTTGTTATAGAGAGACCAT+TGG + tig0023613:53350-53369 Msa1410070:CDS 40.0%
! CACAGAATTTTCTCAGTAGC+TGG + tig0023613:53418-53437 Msa1410070:CDS 40.0%
! AGAATTTTCTCAGTAGCTGG+AGG + tig0023613:53421-53440 Msa1410070:CDS 40.0%
! GAATTTTCTCAGTAGCTGGA+GGG + tig0023613:53422-53441 Msa1410070:CDS 40.0%
! AATTTTCTCAGTAGCTGGAG+GGG + tig0023613:53423-53442 Msa1410070:CDS 40.0%
TTTATGGTGAGCTTCTCGAT+AGG + tig0023613:53658-53677 Msa1410070:intron 40.0%
TTATGGTGAGCTTCTCGATA+GGG + tig0023613:53659-53678 Msa1410070:intron 40.0%
TCGAATGGAATTCAACACAG+CGG - tig0023613:53829-53848 None:intergenic 40.0%
ATTAGACAGTGTATTCCAGG+TGG - tig0023613:53856-53875 None:intergenic 40.0%
TGCATTAGACAGTGTATTCC+AGG - tig0023613:53859-53878 None:intergenic 40.0%
! CCTTCAGAGAAATGCTTTTC+GGG + tig0023613:53900-53919 Msa1410070:CDS 40.0%
!! ATTATGTTGACTTCCACTGC+AGG + tig0023613:54433-54452 Msa1410070:intron 40.0%
GGAGGTTTATGTCAAGTCAT+AGG + tig0023613:54472-54491 Msa1410070:intron 40.0%
TGCAAATGATCCTCAAATCG+CGG - tig0023613:54519-54538 None:intergenic 40.0%
! ATATGAATGATGGAAGGCGA+TGG - tig0023613:54556-54575 None:intergenic 40.0%
CATATTTCATACCTGTCCTG+TGG + tig0023613:54571-54590 Msa1410070:CDS 40.0%
CAATAACTTATCCACAGGAC+AGG - tig0023613:54585-54604 None:intergenic 40.0%
CGCAACAATAACTTATCCAC+AGG - tig0023613:54590-54609 None:intergenic 40.0%
! CTCTCTTTGAGAGATTATGC+TGG + tig0023613:54627-54646 Msa1410070:CDS 40.0%
! CAGATGTTGATTGCTTGCTA+TGG - tig0023613:54801-54820 None:intergenic 40.0%
CAAGCAATCAACATCTGACA+TGG + tig0023613:54804-54823 Msa1410070:CDS 40.0%
CTGACATGGATGAAAAGAGT+TGG + tig0023613:54818-54837 Msa1410070:CDS 40.0%
! CATGGATGAAAAGAGTTGGT+TGG + tig0023613:54822-54841 Msa1410070:CDS 40.0%
GAATTGATTGAGGCATGTGA+TGG + tig0023613:54853-54872 Msa1410070:CDS 40.0%
TGATGGAAATTCCTCTCTTC+TGG + tig0023613:54870-54889 Msa1410070:CDS 40.0%
!! TGTTTAAACGTACTGACTGG+AGG + tig0023613:54974-54993 Msa1410070:three_prime_UTR 40.0%
!! GTTTAAACGTACTGACTGGA+GGG + tig0023613:54975-54994 Msa1410070:three_prime_UTR 40.0%
GTGACATCTGTATTCCTTGA+TGG + tig0023613:55007-55026 Msa1410070:three_prime_UTR 40.0%
!!! ATTTTTTGCCCGTGTAGCTA+TGG - tig0023613:55174-55193 None:intergenic 40.0%
TGTCTTCAACTTCTTCAGTG+TGG + tig0023613:53085-53104 Msa1410070:CDS 40.0%
GAATTGATGTTATGCAGAGG+AGG + tig0023613:53126-53145 Msa1410070:CDS 40.0%
AGACGACCTATACCATTCAA+CGG + tig0023613:53280-53299 Msa1410070:CDS 40.0%
GTTGTTCCGTTGAATGGTAT+AGG - tig0023613:53289-53308 None:intergenic 40.0%
TGCCGTTAAACATAGTTCCA+AGG - tig0023613:53316-53335 None:intergenic 40.0%
TTGGAACTATGTTTAACGGC+AGG + tig0023613:53315-53334 Msa1410070:CDS 40.0%
TCTATAACAACCATATCCCC+AGG - tig0023613:53342-53361 None:intergenic 40.0%
GGTTGTTATAGAGAGACCAT+TGG + tig0023613:53350-53369 Msa1410070:CDS 40.0%
! CACAGAATTTTCTCAGTAGC+TGG + tig0023613:53418-53437 Msa1410070:CDS 40.0%
! AGAATTTTCTCAGTAGCTGG+AGG + tig0023613:53421-53440 Msa1410070:CDS 40.0%
! GAATTTTCTCAGTAGCTGGA+GGG + tig0023613:53422-53441 Msa1410070:CDS 40.0%
! AATTTTCTCAGTAGCTGGAG+GGG + tig0023613:53423-53442 Msa1410070:CDS 40.0%
TTTATGGTGAGCTTCTCGAT+AGG + tig0023613:53658-53677 Msa1410070:intron 40.0%
TTATGGTGAGCTTCTCGATA+GGG + tig0023613:53659-53678 Msa1410070:intron 40.0%
TCGAATGGAATTCAACACAG+CGG - tig0023613:53829-53848 None:intergenic 40.0%
ATTAGACAGTGTATTCCAGG+TGG - tig0023613:53856-53875 None:intergenic 40.0%
TGCATTAGACAGTGTATTCC+AGG - tig0023613:53859-53878 None:intergenic 40.0%
! CCTTCAGAGAAATGCTTTTC+GGG + tig0023613:53900-53919 Msa1410070:CDS 40.0%
!! ATTATGTTGACTTCCACTGC+AGG + tig0023613:54433-54452 Msa1410070:intron 40.0%
GGAGGTTTATGTCAAGTCAT+AGG + tig0023613:54472-54491 Msa1410070:intron 40.0%
TGCAAATGATCCTCAAATCG+CGG - tig0023613:54519-54538 None:intergenic 40.0%
! ATATGAATGATGGAAGGCGA+TGG - tig0023613:54556-54575 None:intergenic 40.0%
CATATTTCATACCTGTCCTG+TGG + tig0023613:54571-54590 Msa1410070:CDS 40.0%
CAATAACTTATCCACAGGAC+AGG - tig0023613:54585-54604 None:intergenic 40.0%
CGCAACAATAACTTATCCAC+AGG - tig0023613:54590-54609 None:intergenic 40.0%
! CTCTCTTTGAGAGATTATGC+TGG + tig0023613:54627-54646 Msa1410070:CDS 40.0%
! CAGATGTTGATTGCTTGCTA+TGG - tig0023613:54801-54820 None:intergenic 40.0%
CAAGCAATCAACATCTGACA+TGG + tig0023613:54804-54823 Msa1410070:CDS 40.0%
CTGACATGGATGAAAAGAGT+TGG + tig0023613:54818-54837 Msa1410070:CDS 40.0%
! CATGGATGAAAAGAGTTGGT+TGG + tig0023613:54822-54841 Msa1410070:CDS 40.0%
GAATTGATTGAGGCATGTGA+TGG + tig0023613:54853-54872 Msa1410070:CDS 40.0%
TGATGGAAATTCCTCTCTTC+TGG + tig0023613:54870-54889 Msa1410070:CDS 40.0%
!! TGTTTAAACGTACTGACTGG+AGG + tig0023613:54974-54993 Msa1410070:three_prime_UTR 40.0%
!! GTTTAAACGTACTGACTGGA+GGG + tig0023613:54975-54994 Msa1410070:three_prime_UTR 40.0%
GTGACATCTGTATTCCTTGA+TGG + tig0023613:55007-55026 Msa1410070:three_prime_UTR 40.0%
!!! ATTTTTTGCCCGTGTAGCTA+TGG - tig0023613:55174-55193 None:intergenic 40.0%
TTGACCAAAATCCTCTGCCA+GGG - tig0023613:53185-53204 None:intergenic 45.0%
TTTGACCAAAATCCTCTGCC+AGG - tig0023613:53186-53205 None:intergenic 45.0%
TATGTTTAACGGCAGGACCT+GGG + tig0023613:53322-53341 Msa1410070:CDS 45.0%
! CGATGTCAACTTCTTTTGCC+TGG + tig0023613:53783-53802 Msa1410070:CDS 45.0%
!! CCCGAAAAGCATTTCTCTGA+AGG - tig0023613:53903-53922 None:intergenic 45.0%
!! AAATGCTTTTCGGGAGCTGA+AGG + tig0023613:53909-53928 Msa1410070:CDS 45.0%
! GTTTTACCTCTGCAGGTTCA+AGG - tig0023613:53938-53957 None:intergenic 45.0%
AAATTCCTCTCTTCTGGCAC+AGG + tig0023613:54876-54895 Msa1410070:CDS 45.0%
ACGGCCATATCATTCCATCA+AGG - tig0023613:55024-55043 None:intergenic 45.0%
CTACACGGGCAAAAAATGCT+TGG + tig0023613:55177-55196 Msa1410070:three_prime_UTR 45.0%
! TAGTAGGTGTTATCTGCCCA+AGG - tig0023613:55473-55492 None:intergenic 45.0%
TTGACCAAAATCCTCTGCCA+GGG - tig0023613:53185-53204 None:intergenic 45.0%
TTTGACCAAAATCCTCTGCC+AGG - tig0023613:53186-53205 None:intergenic 45.0%
TATGTTTAACGGCAGGACCT+GGG + tig0023613:53322-53341 Msa1410070:CDS 45.0%
! CGATGTCAACTTCTTTTGCC+TGG + tig0023613:53783-53802 Msa1410070:CDS 45.0%
!! CCCGAAAAGCATTTCTCTGA+AGG - tig0023613:53903-53922 None:intergenic 45.0%
!! AAATGCTTTTCGGGAGCTGA+AGG + tig0023613:53909-53928 Msa1410070:CDS 45.0%
! GTTTTACCTCTGCAGGTTCA+AGG - tig0023613:53938-53957 None:intergenic 45.0%
AAATTCCTCTCTTCTGGCAC+AGG + tig0023613:54876-54895 Msa1410070:CDS 45.0%
ACGGCCATATCATTCCATCA+AGG - tig0023613:55024-55043 None:intergenic 45.0%
CTACACGGGCAAAAAATGCT+TGG + tig0023613:55177-55196 Msa1410070:three_prime_UTR 45.0%
! TAGTAGGTGTTATCTGCCCA+AGG - tig0023613:55473-55492 None:intergenic 45.0%
TGACCAAAATCCTCTGCCAG+GGG - tig0023613:53184-53203 None:intergenic 50.0%
! GGCAGTGTTGTTCCGTTGAA+TGG - tig0023613:53295-53314 None:intergenic 50.0%
TCAACGGAACAACACTGCCT+TGG + tig0023613:53296-53315 Msa1410070:CDS 50.0%
CTATGTTTAACGGCAGGACC+TGG + tig0023613:53321-53340 Msa1410070:CDS 50.0%
ATGTTTAACGGCAGGACCTG+GGG + tig0023613:53323-53342 Msa1410070:CDS 50.0%
GGAGGGGTAAAGAAGCCTTT+AGG + tig0023613:53439-53458 Msa1410070:CDS 50.0%
CACACATTGCTGCGACCTAA+AGG - tig0023613:53457-53476 None:intergenic 50.0%
CTTTAGGTCGCAGCAATGTG+TGG + tig0023613:53455-53474 Msa1410070:intron 50.0%
! ATTCCATTCGACTTGCCACC+TGG + tig0023613:53838-53857 Msa1410070:CDS 50.0%
ATTCCAGGTGGCAAGTCGAA+TGG - tig0023613:53844-53863 None:intergenic 50.0%
AGGATACCTTGAACCTGCAG+AGG + tig0023613:53929-53948 Msa1410070:CDS 50.0%
AGGTTTCTGATGCCCTTGAC+AGG + tig0023613:54492-54511 Msa1410070:intron 50.0%
GGTTTCTGATGCCCTTGACA+GGG + tig0023613:54493-54512 Msa1410070:intron 50.0%
TTGTTGCGCAACAGGCTTGT+TGG + tig0023613:54602-54621 Msa1410070:CDS 50.0%
! TGTTGCGCAACAGGCTTGTT+GGG + tig0023613:54603-54622 Msa1410070:CDS 50.0%
TGCTGGGAAACAGCAACATG+AGG + tig0023613:54644-54663 Msa1410070:CDS 50.0%
! GGCACAGGTGAACAAGTTGA+AGG + tig0023613:54891-54910 Msa1410070:CDS 50.0%
TGACCAAAATCCTCTGCCAG+GGG - tig0023613:53184-53203 None:intergenic 50.0%
! GGCAGTGTTGTTCCGTTGAA+TGG - tig0023613:53295-53314 None:intergenic 50.0%
TCAACGGAACAACACTGCCT+TGG + tig0023613:53296-53315 Msa1410070:CDS 50.0%
CTATGTTTAACGGCAGGACC+TGG + tig0023613:53321-53340 Msa1410070:CDS 50.0%
ATGTTTAACGGCAGGACCTG+GGG + tig0023613:53323-53342 Msa1410070:CDS 50.0%
GGAGGGGTAAAGAAGCCTTT+AGG + tig0023613:53439-53458 Msa1410070:CDS 50.0%
CACACATTGCTGCGACCTAA+AGG - tig0023613:53457-53476 None:intergenic 50.0%
CTTTAGGTCGCAGCAATGTG+TGG + tig0023613:53455-53474 Msa1410070:intron 50.0%
! ATTCCATTCGACTTGCCACC+TGG + tig0023613:53838-53857 Msa1410070:CDS 50.0%
ATTCCAGGTGGCAAGTCGAA+TGG - tig0023613:53844-53863 None:intergenic 50.0%
AGGATACCTTGAACCTGCAG+AGG + tig0023613:53929-53948 Msa1410070:CDS 50.0%
AGGTTTCTGATGCCCTTGAC+AGG + tig0023613:54492-54511 Msa1410070:intron 50.0%
GGTTTCTGATGCCCTTGACA+GGG + tig0023613:54493-54512 Msa1410070:intron 50.0%
TTGTTGCGCAACAGGCTTGT+TGG + tig0023613:54602-54621 Msa1410070:CDS 50.0%
! TGTTGCGCAACAGGCTTGTT+GGG + tig0023613:54603-54622 Msa1410070:CDS 50.0%
TGCTGGGAAACAGCAACATG+AGG + tig0023613:54644-54663 Msa1410070:CDS 50.0%
! GGCACAGGTGAACAAGTTGA+AGG + tig0023613:54891-54910 Msa1410070:CDS 50.0%
TGCAGAGGAGGACCAATTCC+AGG + tig0023613:53138-53157 Msa1410070:CDS 55.0%
AGGAGGACCAATTCCAGGTG+TGG + tig0023613:53143-53162 Msa1410070:intron 55.0%
GGAGGACCAATTCCAGGTGT+GGG + tig0023613:53144-53163 Msa1410070:intron 55.0%
CCAACTCCCACACCTGGAAT+TGG - tig0023613:53153-53172 None:intergenic 55.0%
CCAATTCCAGGTGTGGGAGT+TGG + tig0023613:53150-53169 Msa1410070:intron 55.0%
TCAAATCGCGGCCCTGTCAA+GGG - tig0023613:54507-54526 None:intergenic 55.0%
GTTCACCTGTGCCAGAAGAG+AGG - tig0023613:54884-54903 None:intergenic 55.0%
!! ACGTACTGACTGGAGGGTAG+TGG + tig0023613:54981-55000 Msa1410070:three_prime_UTR 55.0%
!! CGTACTGACTGGAGGGTAGT+GGG + tig0023613:54982-55001 Msa1410070:three_prime_UTR 55.0%
TGCAGAGGAGGACCAATTCC+AGG + tig0023613:53138-53157 Msa1410070:CDS 55.0%
AGGAGGACCAATTCCAGGTG+TGG + tig0023613:53143-53162 Msa1410070:intron 55.0%
GGAGGACCAATTCCAGGTGT+GGG + tig0023613:53144-53163 Msa1410070:intron 55.0%
CCAACTCCCACACCTGGAAT+TGG - tig0023613:53153-53172 None:intergenic 55.0%
CCAATTCCAGGTGTGGGAGT+TGG + tig0023613:53150-53169 Msa1410070:intron 55.0%
TCAAATCGCGGCCCTGTCAA+GGG - tig0023613:54507-54526 None:intergenic 55.0%
GTTCACCTGTGCCAGAAGAG+AGG - tig0023613:54884-54903 None:intergenic 55.0%
!! ACGTACTGACTGGAGGGTAG+TGG + tig0023613:54981-55000 Msa1410070:three_prime_UTR 55.0%
!! CGTACTGACTGGAGGGTAGT+GGG + tig0023613:54982-55001 Msa1410070:three_prime_UTR 55.0%
CCTCATCCAACTCCCACACC+TGG - tig0023613:53159-53178 None:intergenic 60.0%
CCAGGTGTGGGAGTTGGATG+AGG + tig0023613:53156-53175 Msa1410070:intron 60.0%
! GTGCCCCTGGCAGAGGATTT+TGG + tig0023613:53178-53197 Msa1410070:intron 60.0%
AACGGCAGGACCTGGGGATA+TGG + tig0023613:53329-53348 Msa1410070:CDS 60.0%
CTCAAATCGCGGCCCTGTCA+AGG - tig0023613:54508-54527 None:intergenic 60.0%
CTTGACAGGGCCGCGATTTG+AGG + tig0023613:54506-54525 Msa1410070:CDS 60.0%
CCTCATCCAACTCCCACACC+TGG - tig0023613:53159-53178 None:intergenic 60.0%
CCAGGTGTGGGAGTTGGATG+AGG + tig0023613:53156-53175 Msa1410070:intron 60.0%
! GTGCCCCTGGCAGAGGATTT+TGG + tig0023613:53178-53197 Msa1410070:intron 60.0%
AACGGCAGGACCTGGGGATA+TGG + tig0023613:53329-53348 Msa1410070:CDS 60.0%
CTCAAATCGCGGCCCTGTCA+AGG - tig0023613:54508-54527 None:intergenic 60.0%
CTTGACAGGGCCGCGATTTG+AGG + tig0023613:54506-54525 Msa1410070:CDS 60.0%
! GGAGTTGGATGAGGTGCCCC+TGG + tig0023613:53165-53184 Msa1410070:intron 65.0%
! GGAGTTGGATGAGGTGCCCC+TGG + tig0023613:53165-53184 Msa1410070:intron 65.0%
! GGATGAGGTGCCCCTGGCAG+AGG + tig0023613:53171-53190 Msa1410070:intron 70.0%
! GGATGAGGTGCCCCTGGCAG+AGG + tig0023613:53171-53190 Msa1410070:intron 70.0%
Chromosome Type Strat End Strand Name
tig0023613 gene 53084 55502 53084 ID=Msa1410070;Name=Msa1410070
tig0023613 mRNA 53084 55502 53084 ID=Msa1410070-mRNA-1;Parent=Msa1410070;Name=Msa1410070-mRNA-1;_AED=0.33;_eAED=0.35;_QI=0|0.33|0.14|1|0.33|0.28|7|575|321
tig0023613 exon 53084 53159 53084 ID=Msa1410070-mRNA-1:exon:26340;Parent=Msa1410070-mRNA-1
tig0023613 exon 53259 53473 53259 ID=Msa1410070-mRNA-1:exon:26341;Parent=Msa1410070-mRNA-1
tig0023613 exon 53571 53663 53571 ID=Msa1410070-mRNA-1:exon:26342;Parent=Msa1410070-mRNA-1
tig0023613 exon 53726 53950 53726 ID=Msa1410070-mRNA-1:exon:26343;Parent=Msa1410070-mRNA-1
tig0023613 exon 54455 54486 54455 ID=Msa1410070-mRNA-1:exon:26344;Parent=Msa1410070-mRNA-1
tig0023613 exon 54494 54665 54494 ID=Msa1410070-mRNA-1:exon:26345;Parent=Msa1410070-mRNA-1
tig0023613 exon 54775 55502 54775 ID=Msa1410070-mRNA-1:exon:26346;Parent=Msa1410070-mRNA-1
tig0023613 CDS 53084 53159 53084 ID=Msa1410070-mRNA-1:cds;Parent=Msa1410070-mRNA-1
tig0023613 CDS 53259 53473 53259 ID=Msa1410070-mRNA-1:cds;Parent=Msa1410070-mRNA-1
tig0023613 CDS 53571 53663 53571 ID=Msa1410070-mRNA-1:cds;Parent=Msa1410070-mRNA-1
tig0023613 CDS 53726 53950 53726 ID=Msa1410070-mRNA-1:cds;Parent=Msa1410070-mRNA-1
tig0023613 CDS 54455 54486 54455 ID=Msa1410070-mRNA-1:cds;Parent=Msa1410070-mRNA-1
tig0023613 CDS 54494 54665 54494 ID=Msa1410070-mRNA-1:cds;Parent=Msa1410070-mRNA-1
tig0023613 CDS 54775 54927 54775 ID=Msa1410070-mRNA-1:cds;Parent=Msa1410070-mRNA-1
tig0023613 three_prime_UTR 54928 55502 54928 ID=Msa1410070-mRNA-1:three_prime_utr;Parent=Msa1410070-mRNA-1
Gene Sequence

>Msa1410070

ATGTCTTCAACTTCTTCAGTGTGGCAGCACATGCAGTCCATTGAATTGATGTTATGCAGAGGAGGACCAATTCCAGTTTTTGAAAATGCAACTGAAGAGACGACCTATACCATTCAACGGAACAACACTGCCTTGGAACTATGTTTAACGGCAGGACCTGGGGATATGGTTGTTATAGAGAGACCATTGGGTTTATTGTTCCATGTCTCTGTTTTGAAGTACTTTGACCTCTGTACACAGAATTTTCTCAGTAGCTGGAGGGGTAAAGAAGCCTTTAGGTCGCAGCAATGTTTACATTCATTATCTATCGATTTCCTTGTTGGAATTGAAGTATTTGTACAAAATCAGGGTGGGATACTTTTGAAGCTTTACAGGATCTTTATGCATATTGAGTTATTGAGATTCAAATTCGAGATTCACGAGAGTTGCTCGATATTTACTCGATGTCAACTTCTTTTGCCTGGCAAGTTTCATTATATTTACACCGCTGTGTTGAATTCCATTCGACTTGCCACCTGGAATACACTGTCTAATGCATGTGTTCCTGAACTTTTGTTACCTTCAGAGAAATGCTTTTCGGGAGCTGAAGGATACCTTGAACCTGCAGAGGATAATGAAGATATTTTGGAGGTTTATGTCAAGTTTCTGATGCCCTTGACAGGGCCGCGATTTGAGGATCATTTGCATATACTATACTTGTCCATCGCCTTCCATCATTCATATTTCATACCTGTCCTGTGGATAAGTTATTGTTGCGCAACAGGCTTGTTGGGTCTCTCTTTGAGAGATTATGCTGGGAAACAGCAACATGAGGGAATGTTAATGAATATCATTTGCCATAGCAAGCAATCAACATCTGACATGGATGAAAAGAGTTGGTTGGAGTTGAAAGAATTGATTGAGGCATGTGATGGAAATTCCTCTCTTCTGGCACAGGTGAACAAGTTGAAGGATGTTGCTGCTTAG
Protein sequence

>Msa1410070

MSSTSSVWQHMQSIELMLCRGGPIPVFENATEETTYTIQRNNTALELCLTAGPGDMVVIERPLGLLFHVSVLKYFDLCTQNFLSSWRGKEAFRSQQCLHSLSIDFLVGIEVFVQNQGGILLKLYRIFMHIELLRFKFEIHESCSIFTRCQLLLPGKFHYIYTAVLNSIRLATWNTLSNACVPELLLPSEKCFSGAEGYLEPAEDNEDILEVYVKFLMPLTGPRFEDHLHILYLSIAFHHSYFIPVLWISYCCATGLLGLSLRDYAGKQQHEGMLMNIICHSKQSTSDMDEKSWLELKELIEACDGNSSLLAQVNKLKDVAA*