Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001670.t1 | XP_003624231.1 | 99.4 | 904 | 5 | 0 | 1 | 904 | 80 | 983 | 0.00E+00 | 1748.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001670.t1 | Q9XIF2 | 79.8 | 904 | 181 | 2 | 1 | 904 | 87 | 988 | 0.0e+00 | 1438.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001670.t1 | G7KSG0 | 99.4 | 904 | 5 | 0 | 1 | 904 | 80 | 983 | 0.0e+00 | 1748.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001670.t1 | MTR_7g080730 | 99.447 | 904 | 5 | 0 | 1 | 904 | 80 | 983 | 0.0 | 1847 |
| MS.gene001670.t1 | MTR_8g101340 | 49.670 | 910 | 424 | 9 | 1 | 904 | 103 | 984 | 0.0 | 878 |
| MS.gene001670.t1 | MTR_5g069360 | 42.203 | 917 | 468 | 11 | 1 | 904 | 100 | 967 | 0.0 | 743 |
| MS.gene001670.t1 | MTR_3g462290 | 35.318 | 974 | 550 | 18 | 1 | 904 | 368 | 1331 | 1.18e-176 | 547 |
| MS.gene001670.t1 | MTR_5g036660 | 34.354 | 457 | 251 | 13 | 1 | 420 | 165 | 609 | 5.89e-62 | 229 |
| MS.gene001670.t1 | MTR_3g025300 | 26.005 | 423 | 225 | 13 | 1 | 387 | 458 | 828 | 1.93e-24 | 111 |
| MS.gene001670.t1 | MTR_3g025300 | 27.295 | 414 | 223 | 17 | 1 | 389 | 1306 | 1666 | 1.36e-23 | 108 |
| MS.gene001670.t1 | MTR_3g025300 | 25.943 | 424 | 224 | 14 | 1 | 387 | 458 | 828 | 2.31e-24 | 110 |
| MS.gene001670.t1 | MTR_3g025300 | 27.295 | 414 | 223 | 17 | 1 | 389 | 1306 | 1666 | 1.33e-23 | 108 |
| MS.gene001670.t1 | MTR_1g008600 | 25.874 | 429 | 227 | 17 | 3 | 387 | 547 | 928 | 2.89e-23 | 107 |
| MS.gene001670.t1 | MTR_2g030905 | 24.939 | 409 | 234 | 16 | 1 | 386 | 174 | 532 | 3.43e-15 | 80.9 |
| MS.gene001670.t1 | MTR_4g011450 | 31.383 | 188 | 97 | 10 | 1 | 162 | 1346 | 1527 | 4.27e-13 | 74.3 |
| MS.gene001670.t1 | MTR_7g075463 | 39.362 | 94 | 49 | 2 | 299 | 387 | 336 | 426 | 5.55e-12 | 70.5 |
| MS.gene001670.t1 | MTR_7g075463 | 39.362 | 94 | 49 | 2 | 299 | 387 | 336 | 426 | 6.75e-12 | 70.1 |
| MS.gene001670.t1 | MTR_7g075463 | 39.362 | 94 | 49 | 2 | 299 | 387 | 336 | 426 | 8.27e-12 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001670.t1 | AT1G59760 | 79.757 | 904 | 181 | 2 | 1 | 904 | 87 | 988 | 0.0 | 1499 |
| MS.gene001670.t1 | AT2G06990 | 49.780 | 910 | 436 | 7 | 1 | 904 | 101 | 995 | 0.0 | 885 |
| MS.gene001670.t1 | AT3G46960 | 35.056 | 987 | 536 | 20 | 1 | 904 | 243 | 1207 | 8.17e-172 | 531 |
| MS.gene001670.t1 | AT3G46960 | 35.056 | 987 | 536 | 20 | 1 | 904 | 252 | 1216 | 9.99e-172 | 531 |
| MS.gene001670.t1 | AT3G46960 | 35.056 | 987 | 536 | 20 | 1 | 904 | 380 | 1344 | 7.86e-170 | 530 |
| MS.gene001670.t1 | AT1G70070 | 35.604 | 455 | 248 | 10 | 1 | 420 | 174 | 618 | 1.02e-67 | 246 |
| MS.gene001670.t1 | AT5G61140 | 25.301 | 415 | 230 | 14 | 1 | 389 | 1376 | 1736 | 4.40e-24 | 110 |
| MS.gene001670.t1 | AT5G61140 | 25.412 | 425 | 229 | 15 | 1 | 389 | 528 | 900 | 7.50e-23 | 106 |
| MS.gene001670.t1 | AT5G61140 | 25.301 | 415 | 230 | 14 | 1 | 389 | 1365 | 1725 | 4.95e-24 | 110 |
| MS.gene001670.t1 | AT5G61140 | 25.412 | 425 | 229 | 15 | 1 | 389 | 528 | 900 | 8.96e-23 | 105 |
| MS.gene001670.t1 | AT4G32700 | 25.935 | 428 | 228 | 15 | 3 | 387 | 538 | 919 | 6.51e-24 | 109 |
| MS.gene001670.t1 | AT1G20960 | 26.415 | 424 | 222 | 17 | 1 | 387 | 525 | 895 | 2.41e-22 | 104 |
| MS.gene001670.t1 | AT1G20960 | 26.415 | 424 | 222 | 17 | 1 | 387 | 525 | 895 | 2.41e-22 | 104 |
| MS.gene001670.t1 | AT2G42270 | 24.823 | 423 | 230 | 15 | 1 | 387 | 526 | 896 | 1.84e-21 | 101 |
| MS.gene001670.t1 | AT3G27730 | 36.634 | 101 | 56 | 2 | 292 | 387 | 329 | 426 | 3.66e-12 | 71.2 |
| MS.gene001670.t1 | AT3G27730 | 36.634 | 101 | 56 | 2 | 292 | 387 | 329 | 426 | 3.66e-12 | 71.2 |
| MS.gene001670.t1 | AT3G27730 | 36.634 | 101 | 56 | 2 | 292 | 387 | 329 | 426 | 3.66e-12 | 71.2 |
| MS.gene001670.t1 | AT3G27730 | 36.634 | 101 | 56 | 2 | 292 | 387 | 329 | 426 | 3.66e-12 | 71.2 |
| MS.gene001670.t1 | AT3G27730 | 36.634 | 101 | 56 | 2 | 292 | 387 | 329 | 426 | 3.74e-12 | 71.2 |
| MS.gene001670.t1 | AT3G27730 | 36.634 | 101 | 56 | 2 | 292 | 387 | 329 | 426 | 3.74e-12 | 71.2 |
| MS.gene001670.t1 | AT3G27730 | 36.634 | 101 | 56 | 2 | 292 | 387 | 329 | 426 | 3.74e-12 | 71.2 |
Find 180 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACGATGTCCCTCTTGATTT+TGG | 0.134543 | 7.3:+26719942 | None:intergenic |
| GTCATTTAGGCCTGATATTA+TGG | 0.201439 | 7.3:-26720145 | MS.gene001670:CDS |
| ACCTTGTCATATTGTTTATA+CGG | 0.254047 | 7.3:-26728764 | MS.gene001670:CDS |
| GAAGGATTATTACAATCTTC+TGG | 0.257468 | 7.3:-26724334 | MS.gene001670:CDS |
| TCAGCAAATTCTTTGGCATT+AGG | 0.265700 | 7.3:+26728924 | None:intergenic |
| CACCCAATCAGCAAATTCTT+TGG | 0.268430 | 7.3:+26728917 | None:intergenic |
| CAGCAAATTCTTTGGCATTA+GGG | 0.269491 | 7.3:+26728925 | None:intergenic |
| ATTTCTGCAGATGGCGAAAA+TGG | 0.271936 | 7.3:-26728350 | MS.gene001670:intron |
| ACTTGTCCCCATCAAATTTC+CGG | 0.276089 | 7.3:+26725243 | None:intergenic |
| TCGATCACTTCCTTTAGAAT+TGG | 0.300189 | 7.3:+26726850 | None:intergenic |
| AAAGGCTTTACCTGAGATAT+AGG | 0.313127 | 7.3:+26723877 | None:intergenic |
| AATTTGATGGGGACAAGTTT+AGG | 0.314554 | 7.3:-26725238 | MS.gene001670:CDS |
| TGATTACTAAGTGCTTTAAT+AGG | 0.318601 | 7.3:+26729928 | None:intergenic |
| ATGGCGAAAATGGATCTTAA+TGG | 0.321505 | 7.3:-26728340 | MS.gene001670:CDS |
| AGCCTCCCAGGCTGTAAATA+AGG | 0.322872 | 7.3:+26724249 | None:intergenic |
| AAGACAAAACGGGCATTCTT+TGG | 0.334017 | 7.3:+26728963 | None:intergenic |
| CGATCACTTCCTTTAGAATT+GGG | 0.347514 | 7.3:+26726851 | None:intergenic |
| ATCTACTACTTTAGCATTCA+AGG | 0.353316 | 7.3:-26721436 | MS.gene001670:CDS |
| TGGCGAAAATGGATCTTAAT+GGG | 0.356795 | 7.3:-26728339 | MS.gene001670:CDS |
| CACACCTTCATGTCTTCTTC+AGG | 0.358573 | 7.3:+26721699 | None:intergenic |
| TAGAAGGAACTACAAATATA+AGG | 0.358581 | 7.3:+26719909 | None:intergenic |
| CACCATCTTCACAGCGCATT+TGG | 0.363464 | 7.3:+26724685 | None:intergenic |
| GAAAACGCTAAGTGGCAAAA+AGG | 0.368725 | 7.3:-26728589 | MS.gene001670:CDS |
| ATCGAGTTCTTCTCGAGGTT+TGG | 0.375902 | 7.3:+26720716 | None:intergenic |
| ATTGAACATTAGTTCTGTTA+AGG | 0.382269 | 7.3:+26720821 | None:intergenic |
| AGGTCATGACTACGGAAATC+TGG | 0.382388 | 7.3:-26729109 | MS.gene001670:CDS |
| ATCGCGAAAGAGGTGTGGTT+TGG | 0.389553 | 7.3:-26729007 | MS.gene001670:CDS |
| GTACTTAGTTGTGGATGAAA+AGG | 0.391326 | 7.3:-26728686 | MS.gene001670:CDS |
| ACTTTGTAAGATGCATCTTC+CGG | 0.395837 | 7.3:+26724003 | None:intergenic |
| ACAAATGTCCGGAAATTTGA+TGG | 0.398421 | 7.3:-26725251 | MS.gene001670:CDS |
| CCTTGCATTCAAGCTGAAGC+TGG | 0.400039 | 7.3:+26720652 | None:intergenic |
| CAACATTATATATTTCCTTC+CGG | 0.402599 | 7.3:-26728721 | MS.gene001670:CDS |
| TCTGATGTTGGTTTGATGAC+TGG | 0.405642 | 7.3:-26729877 | MS.gene001670:CDS |
| AATGTTCAATGGTGTCTTCA+AGG | 0.420240 | 7.3:-26720808 | MS.gene001670:CDS |
| ATAGAAGCAGCTAAGTCAAT+TGG | 0.420476 | 7.3:-26720003 | MS.gene001670:CDS |
| CTTTCTGAAAGCTGTCTTCA+CGG | 0.420990 | 7.3:+26728656 | None:intergenic |
| TCGCGAAAGAGGTGTGGTTT+GGG | 0.423444 | 7.3:-26729006 | MS.gene001670:CDS |
| TGCCAAAGAATTTGCTGATT+GGG | 0.434852 | 7.3:-26728919 | MS.gene001670:CDS |
| CTCGCCAGACAAAACAAGAT+AGG | 0.441660 | 7.3:+26720757 | None:intergenic |
| TGATCCTAGTGCCTCTTGCT+TGG | 0.441839 | 7.3:-26729842 | MS.gene001670:intron |
| TCCAACGGCAAAAGATCCTT+TGG | 0.442143 | 7.3:+26721798 | None:intergenic |
| TACACAACCTCCATAATATC+AGG | 0.445091 | 7.3:+26720135 | None:intergenic |
| TAAGTACAGACCCTCACTTC+CGG | 0.445197 | 7.3:+26728702 | None:intergenic |
| GGTTTCAATTCCTATATCTC+AGG | 0.445399 | 7.3:-26723887 | MS.gene001670:intron |
| CCCTTGCTCAAACGTGGAAT+AGG | 0.446304 | 7.3:-26726895 | MS.gene001670:CDS |
| ACATAGAAGTTTGAATAAAG+AGG | 0.447076 | 7.3:-26724307 | MS.gene001670:CDS |
| TGACGAAGAAGACAGTTTGA+AGG | 0.449850 | 7.3:-26724352 | MS.gene001670:CDS |
| GTGTCTGCACATACTTCTGC+TGG | 0.451425 | 7.3:-26730021 | MS.gene001670:CDS |
| ATCCCGTAGAATAGAGGCTT+TGG | 0.452604 | 7.3:-26721580 | MS.gene001670:CDS |
| CATTAGGGACAGTGGCAGAT+AGG | 0.453599 | 7.3:+26728940 | None:intergenic |
| AAGGAAATATATAATGTTGA+AGG | 0.454907 | 7.3:+26728725 | None:intergenic |
| AAACAATATGACAAGGTTGT+TGG | 0.457424 | 7.3:+26728770 | None:intergenic |
| TGGTGTCTTCAAGGACATAA+AGG | 0.457457 | 7.3:-26720799 | MS.gene001670:CDS |
| ATAGGAATTGAAACCACAAT+AGG | 0.461372 | 7.3:+26723895 | None:intergenic |
| TTCCCGCTGCTGATGGTGAT+AGG | 0.461884 | 7.3:-26728618 | MS.gene001670:CDS |
| TGGCAGATAGGAAGACAAAA+CGG | 0.465801 | 7.3:+26728952 | None:intergenic |
| TGGTTTACTCCCAATTCTAA+AGG | 0.471314 | 7.3:-26726860 | MS.gene001670:CDS |
| GTGTGAATTTCTTGCAATGC+AGG | 0.471783 | 7.3:-26728458 | MS.gene001670:intron |
| CATTTGTATATATTCTCCAC+TGG | 0.474713 | 7.3:+26725208 | None:intergenic |
| TACATGCGTGATCGCGAAAG+AGG | 0.475262 | 7.3:-26729017 | MS.gene001670:CDS |
| GGGCAGCTGATAGTTTAAAC+AGG | 0.475906 | 7.3:-26725085 | MS.gene001670:intron |
| AAGAGGGTTCTTCGGAGGCT+AGG | 0.479883 | 7.3:-26721396 | MS.gene001670:CDS |
| CTTTCTAGATTTAGTGAGAA+GGG | 0.482853 | 7.3:-26721738 | MS.gene001670:CDS |
| TGTTTACCTTATTTACAGCC+TGG | 0.482867 | 7.3:-26724255 | MS.gene001670:CDS |
| GTTTCAAGAAGGTCTAATCA+AGG | 0.492777 | 7.3:-26726821 | MS.gene001670:intron |
| AGGCAAGAAAGAGGGTTCTT+CGG | 0.492790 | 7.3:-26721404 | MS.gene001670:CDS |
| CAAATGTCCGGAAATTTGAT+GGG | 0.493522 | 7.3:-26725250 | MS.gene001670:CDS |
| TCTCCAAAGCCTCTATTCTA+CGG | 0.494153 | 7.3:+26721577 | None:intergenic |
| TTCAAAGTTCTATGAGATCA+TGG | 0.494449 | 7.3:-26720097 | MS.gene001670:CDS |
| AAAAGCATCCCGTAGAATAG+AGG | 0.497857 | 7.3:-26721586 | MS.gene001670:CDS |
| ACAAAGGGTCTGAGGTCACT+AGG | 0.500100 | 7.3:-26729073 | MS.gene001670:CDS |
| AGAGGGTTCTTCGGAGGCTA+GGG | 0.503872 | 7.3:-26721395 | MS.gene001670:intron |
| TTATGGAGGTTGTGTATGCT+TGG | 0.504319 | 7.3:-26720128 | MS.gene001670:CDS |
| CTCCAAAGCCTCTATTCTAC+GGG | 0.506679 | 7.3:+26721578 | None:intergenic |
| GTTGTGTATGCTTGGGCGAA+AGG | 0.507277 | 7.3:-26720120 | MS.gene001670:CDS |
| TGGAGAGAAACGAGCCTCCC+AGG | 0.510071 | 7.3:+26724237 | None:intergenic |
| ATGCCAAAGAATTTGCTGAT+TGG | 0.510427 | 7.3:-26728920 | MS.gene001670:CDS |
| TCCTATTCCACGTTTGAGCA+AGG | 0.510479 | 7.3:+26726894 | None:intergenic |
| GACAATGTGGTCGACTTGAA+AGG | 0.514288 | 7.3:-26720882 | MS.gene001670:CDS |
| GTTTACCTTATTTACAGCCT+GGG | 0.514370 | 7.3:-26724254 | MS.gene001670:CDS |
| TACTTAGTTGTGGATGAAAA+GGG | 0.515805 | 7.3:-26728685 | MS.gene001670:CDS |
| TTAACAGAACTAATGTTCAA+TGG | 0.517657 | 7.3:-26720819 | MS.gene001670:CDS |
| GCTCTTATTCCCGCTGCTGA+TGG | 0.521231 | 7.3:-26728625 | MS.gene001670:CDS |
| CCTATTCCACGTTTGAGCAA+GGG | 0.522248 | 7.3:+26726895 | None:intergenic |
| ATTTGCTGATTGGGTGGCAA+AGG | 0.522437 | 7.3:-26728910 | MS.gene001670:intron |
| CCAGCTTCAGCTTGAATGCA+AGG | 0.523581 | 7.3:-26720652 | MS.gene001670:intron |
| TCGAGCCATTCCTGATCTTG+AGG | 0.524397 | 7.3:-26724616 | MS.gene001670:intron |
| AAATAAGGTAAACAGTGTCT+TGG | 0.524512 | 7.3:+26724264 | None:intergenic |
| CCTCATGGTTGATGAGAAGA+TGG | 0.525125 | 7.3:-26725138 | MS.gene001670:CDS |
| GGCAGATAGGAAGACAAAAC+GGG | 0.525213 | 7.3:+26728953 | None:intergenic |
| ATATAATGTTGAAGGGGAGT+TGG | 0.526101 | 7.3:+26728733 | None:intergenic |
| GCAAGAGGCACTAGGATCAA+TGG | 0.527306 | 7.3:+26729846 | None:intergenic |
| CTTCCTCACTAGAAGTGCAT+TGG | 0.527980 | 7.3:+26724217 | None:intergenic |
| CTAAAGCTGAAAAGTATCAC+AGG | 0.529799 | 7.3:+26728490 | None:intergenic |
| AGGAAATATATAATGTTGAA+GGG | 0.531599 | 7.3:+26728726 | None:intergenic |
| AGGATTAAGGGTGTTTCTGA+AGG | 0.532900 | 7.3:-26724135 | MS.gene001670:intron |
| ACAATGTGGTCGACTTGAAA+GGG | 0.533604 | 7.3:-26720881 | MS.gene001670:CDS |
| CTTGCATTCAAGCTGAAGCT+GGG | 0.533738 | 7.3:+26720653 | None:intergenic |
| ATCGAGATCTTGTTTCAAGA+AGG | 0.534720 | 7.3:-26726832 | MS.gene001670:CDS |
| TTCCTATCACCATCAGCAGC+GGG | 0.534985 | 7.3:+26728616 | None:intergenic |
| CATGTTGTAGCTTAAATGAA+AGG | 0.535435 | 7.3:+26724716 | None:intergenic |
| ATGAGCTCAAGGCAAGAAAG+AGG | 0.538962 | 7.3:-26721413 | MS.gene001670:CDS |
| GTCGACGAGGTATTGATGAC+CGG | 0.539554 | 7.3:-26725172 | MS.gene001670:CDS |
| CACAATTACAAGATACTGCT+CGG | 0.542637 | 7.3:-26720683 | MS.gene001670:CDS |
| AAAAGGTTTGGTGCTGGGCA+AGG | 0.545517 | 7.3:-26728572 | MS.gene001670:CDS |
| TGAGGGTCTGTACTTAGTTG+TGG | 0.546367 | 7.3:-26728695 | MS.gene001670:CDS |
| ATACAAATGAGTGGTCGTGC+TGG | 0.549699 | 7.3:-26725194 | MS.gene001670:CDS |
| TAGATCAATTAGAAGACTTG+AGG | 0.550410 | 7.3:-26720043 | MS.gene001670:CDS |
| AACCAAATGCGCTGTGAAGA+TGG | 0.552675 | 7.3:-26724687 | MS.gene001670:CDS |
| GGCGTAGTATGCAATACAAA+GGG | 0.556159 | 7.3:-26729088 | MS.gene001670:CDS |
| ATATTTCCTTCCGGAAGTGA+GGG | 0.557515 | 7.3:-26728712 | MS.gene001670:CDS |
| GCTACAGAGACCTTCAGCAT+TGG | 0.559468 | 7.3:-26725305 | MS.gene001670:CDS |
| GCGCTGTGAAGATGGTGATC+CGG | 0.560404 | 7.3:-26724679 | MS.gene001670:CDS |
| TTGATGGGGACAAGTTTAGG+TGG | 0.561783 | 7.3:-26725235 | MS.gene001670:CDS |
| TATGGAGGTTGTGTATGCTT+GGG | 0.562105 | 7.3:-26720127 | MS.gene001670:CDS |
| TAAAGACTCTTGAAGAAGAG+AGG | 0.562228 | 7.3:-26724389 | MS.gene001670:CDS |
| AGGTCACTAGGGAGGTAGCT+TGG | 0.564193 | 7.3:-26729061 | MS.gene001670:CDS |
| CATACCAAGCAAGAGGCACT+AGG | 0.567518 | 7.3:+26729838 | None:intergenic |
| TATATTTCCTTCCGGAAGTG+AGG | 0.568482 | 7.3:-26728713 | MS.gene001670:CDS |
| CAAAGGGTCTGAGGTCACTA+GGG | 0.569814 | 7.3:-26729072 | MS.gene001670:CDS |
| AATTGGAGAAATTGAGCTTG+AGG | 0.570010 | 7.3:-26719986 | MS.gene001670:CDS |
| AAAGACTCTTGAAGAAGAGA+GGG | 0.570286 | 7.3:-26724388 | MS.gene001670:CDS |
| TCTTTCTAGATTTAGTGAGA+AGG | 0.571697 | 7.3:-26721739 | MS.gene001670:CDS |
| AGCATTCAAGGATGAGCTCA+AGG | 0.572678 | 7.3:-26721424 | MS.gene001670:CDS |
| TCGACGAGGTATTGATGACC+GGG | 0.575134 | 7.3:-26725171 | MS.gene001670:CDS |
| TACCTTATTTACAGCCTGGG+AGG | 0.578083 | 7.3:-26724251 | MS.gene001670:CDS |
| TGATGATAAGAAGCTTCCTC+AGG | 0.578518 | 7.3:-26728257 | MS.gene001670:intron |
| AGATGATGCAAGCATAAAGC+CGG | 0.579138 | 7.3:-26724022 | MS.gene001670:CDS |
| ACAAACCTCAAGATCAGGAA+TGG | 0.579158 | 7.3:+26724611 | None:intergenic |
| TATTGAAGATCAGTTGACAT+GGG | 0.585003 | 7.3:-26724178 | MS.gene001670:CDS |
| TTCTGCTGGGAAAACTGTTG+TGG | 0.589078 | 7.3:-26730007 | MS.gene001670:CDS |
| AGAACGTGGAGAACCTATTG+TGG | 0.590897 | 7.3:-26723908 | MS.gene001670:CDS |
| CCGGGGAGTATGTATCCTCA+TGG | 0.593714 | 7.3:-26725153 | MS.gene001670:CDS |
| TCTCCAATGCACTTCTAGTG+AGG | 0.594103 | 7.3:-26724220 | MS.gene001670:CDS |
| ATGCTGCCCTTGCTCAAACG+TGG | 0.599209 | 7.3:-26726901 | MS.gene001670:CDS |
| AGAAAGCGACATATTCAAGA+TGG | 0.604009 | 7.3:-26728542 | MS.gene001670:CDS |
| TGGCGTAGTATGCAATACAA+AGG | 0.605128 | 7.3:-26729089 | MS.gene001670:CDS |
| CATATTCAAACCAATGCTGA+AGG | 0.606797 | 7.3:+26725295 | None:intergenic |
| TGAGCTCAAGGCAAGAAAGA+GGG | 0.607550 | 7.3:-26721412 | MS.gene001670:CDS |
| TTCTTTGGCATTAGGGACAG+TGG | 0.608991 | 7.3:+26728932 | None:intergenic |
| AGATCCTGAAGAAGACATGA+AGG | 0.609387 | 7.3:-26721703 | MS.gene001670:intron |
| GCTTGAGGCAAAGTTTGAAG+AGG | 0.612703 | 7.3:-26719971 | MS.gene001670:CDS |
| AATGTTGAAGGGGAGTTGGT+CGG | 0.613901 | 7.3:+26728737 | None:intergenic |
| GGAAATATATAATGTTGAAG+GGG | 0.613970 | 7.3:+26728727 | None:intergenic |
| TTTCCTATCACCATCAGCAG+CGG | 0.617188 | 7.3:+26728615 | None:intergenic |
| ATTGAAGATCAGTTGACATG+GGG | 0.617190 | 7.3:-26724177 | MS.gene001670:CDS |
| TCTTAATGGGGATATAGAGA+AGG | 0.617908 | 7.3:-26728326 | MS.gene001670:CDS |
| TCTTCTTCAGGATCTAGAAG+TGG | 0.620210 | 7.3:+26721711 | None:intergenic |
| ATTTAGGCCTGATATTATGG+AGG | 0.621480 | 7.3:-26720142 | MS.gene001670:CDS |
| TGTCTGCACATACTTCTGCT+GGG | 0.622138 | 7.3:-26730020 | MS.gene001670:CDS |
| AGGCAGTGTCCAAAATCAAG+AGG | 0.624431 | 7.3:-26719951 | MS.gene001670:CDS |
| TTATTGAAGATCAGTTGACA+TGG | 0.628918 | 7.3:-26724179 | MS.gene001670:CDS |
| GTAGTAGCATACCAAGCAAG+AGG | 0.633717 | 7.3:+26729831 | None:intergenic |
| CCATGAGGATACATACTCCC+CGG | 0.637452 | 7.3:+26725153 | None:intergenic |
| CAAAGAATTTGCTGATTGGG+TGG | 0.637884 | 7.3:-26728916 | MS.gene001670:CDS |
| TATGCAATACAAAGGGTCTG+AGG | 0.638495 | 7.3:-26729081 | MS.gene001670:CDS |
| GGCGAAAATGGATCTTAATG+GGG | 0.645395 | 7.3:-26728338 | MS.gene001670:CDS |
| GGCAGTGTCCAAAATCAAGA+GGG | 0.648163 | 7.3:-26719950 | MS.gene001670:CDS |
| GGAATAGGAGTACATCACTC+TGG | 0.648671 | 7.3:-26726880 | MS.gene001670:CDS |
| GGAGAATATATACAAATGAG+TGG | 0.649361 | 7.3:-26725203 | MS.gene001670:CDS |
| AAATGTCCGGAAATTTGATG+GGG | 0.652699 | 7.3:-26725249 | MS.gene001670:CDS |
| GCGTGATCGCGAAAGAGGTG+TGG | 0.653007 | 7.3:-26729012 | MS.gene001670:CDS |
| CAAGAAAGAGGGTTCTTCGG+AGG | 0.657043 | 7.3:-26721401 | MS.gene001670:CDS |
| TACAGACCCTCACTTCCGGA+AGG | 0.658488 | 7.3:+26728706 | None:intergenic |
| TTGAAGATCAGTTGACATGG+GGG | 0.659040 | 7.3:-26724176 | MS.gene001670:CDS |
| AAGTTTAGGTGGATAACCAG+TGG | 0.660788 | 7.3:-26725224 | MS.gene001670:CDS |
| AGCAGATCGAGTTCTTCTCG+AGG | 0.667916 | 7.3:+26720711 | None:intergenic |
| CCTGCGTCTATACATACCAA+AGG | 0.668515 | 7.3:-26721814 | MS.gene001670:CDS |
| AGTGGTCGTGCTGGTCGACG+AGG | 0.669500 | 7.3:-26725185 | MS.gene001670:CDS |
| TGTCTTCAAGGACATAAAGG+TGG | 0.672228 | 7.3:-26720796 | MS.gene001670:CDS |
| TGTGGTCGACTTGAAAGGGA+AGG | 0.673279 | 7.3:-26720877 | MS.gene001670:CDS |
| AGGGTCTGAGGTCACTAGGG+AGG | 0.676167 | 7.3:-26729069 | MS.gene001670:CDS |
| GTGGTGACGAAAGATAAACT+TGG | 0.680698 | 7.3:-26723961 | MS.gene001670:CDS |
| CCTTTGGTATGTATAGACGC+AGG | 0.683839 | 7.3:+26721814 | None:intergenic |
| TCCGTATAAACAATATGACA+AGG | 0.686576 | 7.3:+26728763 | None:intergenic |
| CCATCTTCTCATCAACCATG+AGG | 0.692068 | 7.3:+26725138 | None:intergenic |
| ATTGTTCCTCTAAAAGAACG+TGG | 0.697312 | 7.3:-26723922 | MS.gene001670:CDS |
| TGATATTCTTACAAGATGTG+TGG | 0.703141 | 7.3:-26723980 | MS.gene001670:CDS |
| ATATGCTACAAGTGACAATG+TGG | 0.705172 | 7.3:-26720895 | MS.gene001670:CDS |
| CGACGAGGTATTGATGACCG+GGG | 0.761255 | 7.3:-26725170 | MS.gene001670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 26719918 | 26730043 | 26719918 | ID=MS.gene001670 |
| chr7.3 | mRNA | 26719918 | 26730043 | 26719918 | ID=MS.gene001670.t1;Parent=MS.gene001670 |
| chr7.3 | exon | 26729843 | 26730043 | 26729843 | ID=MS.gene001670.t1.exon1;Parent=MS.gene001670.t1 |
| chr7.3 | CDS | 26729843 | 26730043 | 26729843 | ID=cds.MS.gene001670.t1;Parent=MS.gene001670.t1 |
| chr7.3 | exon | 26728911 | 26729129 | 26728911 | ID=MS.gene001670.t1.exon2;Parent=MS.gene001670.t1 |
| chr7.3 | CDS | 26728911 | 26729129 | 26728911 | ID=cds.MS.gene001670.t1;Parent=MS.gene001670.t1 |
| chr7.3 | exon | 26728459 | 26728797 | 26728459 | ID=MS.gene001670.t1.exon3;Parent=MS.gene001670.t1 |
| chr7.3 | CDS | 26728459 | 26728797 | 26728459 | ID=cds.MS.gene001670.t1;Parent=MS.gene001670.t1 |
| chr7.3 | exon | 26728258 | 26728362 | 26728258 | ID=MS.gene001670.t1.exon4;Parent=MS.gene001670.t1 |
| chr7.3 | CDS | 26728258 | 26728362 | 26728258 | ID=cds.MS.gene001670.t1;Parent=MS.gene001670.t1 |
| chr7.3 | exon | 26726822 | 26726932 | 26726822 | ID=MS.gene001670.t1.exon5;Parent=MS.gene001670.t1 |
| chr7.3 | CDS | 26726822 | 26726932 | 26726822 | ID=cds.MS.gene001670.t1;Parent=MS.gene001670.t1 |
| chr7.3 | exon | 26725086 | 26725336 | 26725086 | ID=MS.gene001670.t1.exon6;Parent=MS.gene001670.t1 |
| chr7.3 | CDS | 26725086 | 26725336 | 26725086 | ID=cds.MS.gene001670.t1;Parent=MS.gene001670.t1 |
| chr7.3 | exon | 26724617 | 26724740 | 26724617 | ID=MS.gene001670.t1.exon7;Parent=MS.gene001670.t1 |
| chr7.3 | CDS | 26724617 | 26724740 | 26724617 | ID=cds.MS.gene001670.t1;Parent=MS.gene001670.t1 |
| chr7.3 | exon | 26724136 | 26724418 | 26724136 | ID=MS.gene001670.t1.exon8;Parent=MS.gene001670.t1 |
| chr7.3 | CDS | 26724136 | 26724418 | 26724136 | ID=cds.MS.gene001670.t1;Parent=MS.gene001670.t1 |
| chr7.3 | exon | 26723888 | 26724042 | 26723888 | ID=MS.gene001670.t1.exon9;Parent=MS.gene001670.t1 |
| chr7.3 | CDS | 26723888 | 26724042 | 26723888 | ID=cds.MS.gene001670.t1;Parent=MS.gene001670.t1 |
| chr7.3 | exon | 26721704 | 26721853 | 26721704 | ID=MS.gene001670.t1.exon10;Parent=MS.gene001670.t1 |
| chr7.3 | CDS | 26721704 | 26721853 | 26721704 | ID=cds.MS.gene001670.t1;Parent=MS.gene001670.t1 |
| chr7.3 | exon | 26721396 | 26721628 | 26721396 | ID=MS.gene001670.t1.exon11;Parent=MS.gene001670.t1 |
| chr7.3 | CDS | 26721396 | 26721628 | 26721396 | ID=cds.MS.gene001670.t1;Parent=MS.gene001670.t1 |
| chr7.3 | exon | 26720653 | 26720917 | 26720653 | ID=MS.gene001670.t1.exon12;Parent=MS.gene001670.t1 |
| chr7.3 | CDS | 26720653 | 26720917 | 26720653 | ID=cds.MS.gene001670.t1;Parent=MS.gene001670.t1 |
| chr7.3 | exon | 26719918 | 26720196 | 26719918 | ID=MS.gene001670.t1.exon13;Parent=MS.gene001670.t1 |
| chr7.3 | CDS | 26719918 | 26720196 | 26719918 | ID=cds.MS.gene001670.t1;Parent=MS.gene001670.t1 |
| Gene Sequence |
| Protein sequence |