Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006014.t1 | XP_003591980.1 | 88.7 | 186 | 20 | 1 | 1 | 185 | 1 | 186 | 6.00E-88 | 333.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006014.t1 | G7I9N4 | 88.7 | 186 | 20 | 1 | 1 | 185 | 1 | 186 | 4.3e-88 | 333.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene006014 | MS.gene006013 | PPI |
| MS.gene006014 | MS.gene059329 | PPI |
| MS.gene006014 | MS.gene059328 | PPI |
| MS.gene006014 | MS.gene041739 | PPI |
| MS.gene006014 | MS.gene54750 | PPI |
| MS.gene006014 | MS.gene038651 | PPI |
| MS.gene006014 | MS.gene041740 | PPI |
| MS.gene006014 | MS.gene33997 | PPI |
| MS.gene006014 | MS.gene041741 | PPI |
| MS.gene006014 | MS.gene006015 | PPI |
| MS.gene006014 | MS.gene33992 | PPI |
| MS.gene006014 | MS.gene043625 | PPI |
| MS.gene006014 | MS.gene33993 | PPI |
| MS.gene006014 | MS.gene33994 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006014.t1 | MTR_1g095890 | 88.710 | 186 | 20 | 1 | 1 | 185 | 1 | 186 | 7.77e-120 | 337 |
| MS.gene006014.t1 | MTR_1g095900 | 78.378 | 185 | 40 | 0 | 1 | 185 | 1 | 185 | 3.04e-106 | 302 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006014.t1 | AT2G35810 | 63.536 | 181 | 59 | 3 | 7 | 184 | 22 | 198 | 2.32e-82 | 242 |
| MS.gene006014.t1 | AT2G35810 | 63.536 | 181 | 59 | 3 | 7 | 184 | 22 | 198 | 2.32e-82 | 242 |
| MS.gene006014.t1 | AT2G35820 | 62.778 | 180 | 61 | 2 | 7 | 184 | 8 | 183 | 1.14e-80 | 238 |
| MS.gene006014.t1 | AT2G35830 | 64.088 | 181 | 59 | 3 | 7 | 184 | 8 | 185 | 9.39e-80 | 235 |
| MS.gene006014.t1 | AT2G35820 | 62.778 | 180 | 61 | 2 | 7 | 184 | 98 | 273 | 5.51e-79 | 237 |
| MS.gene006014.t1 | AT2G35830 | 62.983 | 181 | 56 | 4 | 7 | 184 | 8 | 180 | 9.94e-76 | 225 |
Find 52 sgRNAs with CRISPR-Local
Find 124 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCAGGTCTTCAAGGTTTC+AGG | 0.178682 | 1.3:+66704775 | MS.gene006014:CDS |
| GGTGGTAATGTTTGGTATCT+TGG | 0.305200 | 1.3:+66704643 | MS.gene006014:CDS |
| TCACCGGACGGCGAGGAGTT+TGG | 0.361360 | 1.3:+66703357 | MS.gene006014:CDS |
| GATCCATTGGTGGTAATGTT+TGG | 0.407930 | 1.3:+66704635 | MS.gene006014:CDS |
| TCCTGCCATTGAGGATGTCC+AGG | 0.411710 | 1.3:+66704759 | MS.gene006014:CDS |
| TGTTGATTCAAATGAAATCA+AGG | 0.432271 | 1.3:+66704684 | MS.gene006014:CDS |
| TGAGGATGTCCAGGTCTTCA+AGG | 0.437020 | 1.3:+66704768 | MS.gene006014:CDS |
| TAGAAAACCTGGGAATTCCT+TGG | 0.438964 | 1.3:-66703407 | None:intergenic |
| GACCTGACCGTACTCCTTGA+AGG | 0.446533 | 1.3:-66703325 | None:intergenic |
| AGCAACTCCGTCAACCTTCA+AGG | 0.460651 | 1.3:+66703311 | MS.gene006014:CDS |
| AGAAAACCTGGGAATTCCTT+GGG | 0.474456 | 1.3:-66703406 | None:intergenic |
| AGGTCAAGTTGAGCATCGTT+TGG | 0.477044 | 1.3:-66703381 | None:intergenic |
| GGACCAAACTCCTCGCCGTC+CGG | 0.492800 | 1.3:-66703360 | None:intergenic |
| TCATTTGAATCAACAATGGA+TGG | 0.494781 | 1.3:-66704676 | None:intergenic |
| TCTATTTAAGTCTGATACAA+TGG | 0.496626 | 1.3:+66704843 | MS.gene006014:CDS |
| ACCTCACCCAAGGAATTCCC+AGG | 0.499024 | 1.3:+66703400 | MS.gene006014:CDS |
| CCGTACTCCTTGAAGGTTGA+CGG | 0.504142 | 1.3:-66703318 | None:intergenic |
| GTGATATTAGAAAACTTAAG+TGG | 0.517430 | 1.3:-66704583 | None:intergenic |
| ACCTGGACATCCTCAATGGC+AGG | 0.518519 | 1.3:-66704760 | None:intergenic |
| ACTCAATGCCTTGGATCCAT+TGG | 0.518618 | 1.3:+66704622 | MS.gene006014:CDS |
| AATCGTGGGACATGGCCTGC+GGG | 0.529013 | 1.3:+66704817 | MS.gene006014:CDS |
| AACCTTCAAGGAGTACGGTC+AGG | 0.537192 | 1.3:+66703323 | MS.gene006014:CDS |
| ACCTGGGAATTCCTTGGGTG+AGG | 0.537872 | 1.3:-66703401 | None:intergenic |
| CAATGCCTTGGATCCATTGG+TGG | 0.542939 | 1.3:+66704625 | MS.gene006014:CDS |
| ATACCAAACATTACCACCAA+TGG | 0.547916 | 1.3:-66704638 | None:intergenic |
| TAATCGTGGGACATGGCCTG+CGG | 0.554570 | 1.3:+66704816 | MS.gene006014:CDS |
| TGAAGCTTAATCGTGGGACA+TGG | 0.555662 | 1.3:+66704809 | MS.gene006014:CDS |
| GAAGACCTGGACATCCTCAA+TGG | 0.556353 | 1.3:-66704764 | None:intergenic |
| GCAAGTGTGACTCAATGCCT+TGG | 0.560708 | 1.3:+66704613 | MS.gene006014:CDS |
| TCAGGTCATTGAGGCTTCAC+CGG | 0.564970 | 1.3:+66703341 | MS.gene006014:CDS |
| GATTTCATTTGAATCAACAA+TGG | 0.567401 | 1.3:-66704680 | None:intergenic |
| AGCCTGAAACCTTGAAGACC+TGG | 0.571564 | 1.3:-66704777 | None:intergenic |
| CCGTCAACCTTCAAGGAGTA+CGG | 0.572133 | 1.3:+66703318 | MS.gene006014:CDS |
| TTATGTGCCTCCTGCCATTG+AGG | 0.572418 | 1.3:+66704750 | MS.gene006014:CDS |
| GTCATTGAGGCTTCACCGGA+CGG | 0.573850 | 1.3:+66703345 | MS.gene006014:CDS |
| GACTTAAATAGAGGACCCGC+AGG | 0.575846 | 1.3:-66704832 | None:intergenic |
| AATTTCTGAAGCTTAATCGT+GGG | 0.591063 | 1.3:+66704803 | MS.gene006014:CDS |
| CATTACCACCAATGGATCCA+AGG | 0.593498 | 1.3:-66704630 | None:intergenic |
| TGATATTAGAAAACTTAAGT+GGG | 0.595478 | 1.3:-66704582 | None:intergenic |
| ATCATAAATGGAGAGCGTAA+AGG | 0.598064 | 1.3:+66703266 | None:intergenic |
| TAATGTTTGGTATCTTGGAG+TGG | 0.602976 | 1.3:+66704648 | MS.gene006014:CDS |
| AAATTTCTGAAGCTTAATCG+TGG | 0.608012 | 1.3:+66704802 | MS.gene006014:CDS |
| ATTGTATCAGACTTAAATAG+AGG | 0.622516 | 1.3:-66704841 | None:intergenic |
| GCTCAACTTGACCTCACCCA+AGG | 0.622952 | 1.3:+66703390 | MS.gene006014:CDS |
| AAATGAAATCAAGGATGACA+CGG | 0.629245 | 1.3:+66704693 | MS.gene006014:CDS |
| TGAGGCTTCACCGGACGGCG+AGG | 0.633096 | 1.3:+66703350 | MS.gene006014:CDS |
| GTGCTTCTTAAAGTTGTGTG+TGG | 0.641404 | 1.3:-66705064 | None:intergenic |
| CACAACTTTAAGAAGCACAA+TGG | 0.641416 | 1.3:+66705069 | MS.gene006014:CDS |
| AATGAAATCAAGGATGACAC+GGG | 0.656842 | 1.3:+66704694 | MS.gene006014:CDS |
| GGAGTACGGTCAGGTCATTG+AGG | 0.671075 | 1.3:+66703332 | MS.gene006014:CDS |
| TGGACATCCTCAATGGCAGG+AGG | 0.702078 | 1.3:-66704757 | None:intergenic |
| ACAGTCGTGAAATCGCGCAG+CGG | 0.734475 | 1.3:+66704721 | MS.gene006014:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTATCTTTGTTAAACAT+CGG | + | chr1.3:66703795-66703814 | MS.gene006014:intron | 15.0% |
| !! | CAATGATAATAAATTAACAT+TGG | - | chr1.3:66703999-66704018 | None:intergenic | 15.0% |
| !! | TAGGAAACAAAAAAAAAATA+TGG | - | chr1.3:66704266-66704285 | None:intergenic | 15.0% |
| !!! | TTTATTGTTTTATTTGATGT+TGG | + | chr1.3:66703683-66703702 | MS.gene006014:intron | 15.0% |
| !! | AATTGAGAAAAGACTATAAA+TGG | + | chr1.3:66703757-66703776 | MS.gene006014:intron | 20.0% |
| !! | ACACATTATTTCAATAAGTT+AGG | - | chr1.3:66704528-66704547 | None:intergenic | 20.0% |
| !! | ACATTAAAAGTTTGATAAGT+TGG | - | chr1.3:66703441-66703460 | None:intergenic | 20.0% |
| !! | AGAAACTTGAAACTATTATT+TGG | + | chr1.3:66703482-66703501 | MS.gene006014:intron | 20.0% |
| !! | TGATATTAGAAAACTTAAGT+GGG | - | chr1.3:66704585-66704604 | None:intergenic | 20.0% |
| !!! | AATTTTGTAGATGTCAAATA+TGG | + | chr1.3:66703536-66703555 | MS.gene006014:intron | 20.0% |
| !!! | ATTGAAATAATGTGTTTTGT+AGG | + | chr1.3:66704533-66704552 | MS.gene006014:intron | 20.0% |
| !!! | CTACAAAATTGTTGTTATTT+GGG | - | chr1.3:66703526-66703545 | None:intergenic | 20.0% |
| !!! | TCTACAAAATTGTTGTTATT+TGG | - | chr1.3:66703527-66703546 | None:intergenic | 20.0% |
| ! | AATTTATGCATAGCATCAAT+AGG | - | chr1.3:66704285-66704304 | None:intergenic | 25.0% |
| ! | ATCAAAACTACTATTGAAAG+TGG | - | chr1.3:66703631-66703650 | None:intergenic | 25.0% |
| ! | ATGTTGTTGTGGTTTATATA+TGG | + | chr1.3:66705007-66705026 | MS.gene006014:intron | 25.0% |
| ! | ATTGTATCAGACTTAAATAG+AGG | - | chr1.3:66704844-66704863 | None:intergenic | 25.0% |
| ! | CTAATCTGTATCTATGATAA+CGG | - | chr1.3:66703835-66703854 | None:intergenic | 25.0% |
| ! | CTTTACGCAACAATAATTAA+TGG | - | chr1.3:66703581-66703600 | None:intergenic | 25.0% |
| ! | GAATGCCAAGATAATTAATA+GGG | - | chr1.3:66704323-66704342 | None:intergenic | 25.0% |
| ! | GATTTCATTTGAATCAACAA+TGG | - | chr1.3:66704683-66704702 | None:intergenic | 25.0% |
| ! | GTGATATTAGAAAACTTAAG+TGG | - | chr1.3:66704586-66704605 | None:intergenic | 25.0% |
| ! | TAGTACCCTATTAATTATCT+TGG | + | chr1.3:66704315-66704334 | MS.gene006014:intron | 25.0% |
| ! | TCTATTTAAGTCTGATACAA+TGG | + | chr1.3:66704843-66704862 | MS.gene006014:CDS | 25.0% |
| ! | TGAATGCCAAGATAATTAAT+AGG | - | chr1.3:66704324-66704343 | None:intergenic | 25.0% |
| !! | TCAAAATGAGCAAACATTTT+TGG | - | chr1.3:66703970-66703989 | None:intergenic | 25.0% |
| !!! | GTTTTTTTTATTCTGTGTAC+AGG | + | chr1.3:66705029-66705048 | MS.gene006014:intron | 25.0% |
| !!! | TACAAGTTAAATTGAGTTGA+TGG | - | chr1.3:66704452-66704471 | None:intergenic | 25.0% |
| !!! | TAGTTTTGATCAACTTTGAT+TGG | + | chr1.3:66703641-66703660 | MS.gene006014:intron | 25.0% |
| !!! | TGTCTTTCTTTATGTTTTTG+TGG | + | chr1.3:66704984-66705003 | MS.gene006014:intron | 25.0% |
| !!! | TGTTGATTCAAATGAAATCA+AGG | + | chr1.3:66704684-66704703 | MS.gene006014:CDS | 25.0% |
| AAATGAAATCAAGGATGACA+CGG | + | chr1.3:66704693-66704712 | MS.gene006014:CDS | 30.0% | |
| ATCCATTGATGAAAGAAACT+TGG | + | chr1.3:66704391-66704410 | MS.gene006014:intron | 30.0% | |
| ATTTGAGAGGCTAGAAATAT+TGG | + | chr1.3:66704367-66704386 | MS.gene006014:intron | 30.0% | |
| CAATAAGTTAGGACATTTGT+TGG | - | chr1.3:66704517-66704536 | None:intergenic | 30.0% | |
| CACTGTATATCAAATTTGAG+AGG | + | chr1.3:66704354-66704373 | MS.gene006014:intron | 30.0% | |
| CTCTCAAATTTGATATACAG+TGG | - | chr1.3:66704356-66704375 | None:intergenic | 30.0% | |
| GATGCACACATAATATTAGA+GGG | + | chr1.3:66703877-66703896 | MS.gene006014:intron | 30.0% | |
| GGGTACAATTGAAAACAATT+AGG | + | chr1.3:66704157-66704176 | MS.gene006014:intron | 30.0% | |
| GGTGAAAAAATAGAAAACCT+GGG | - | chr1.3:66703420-66703439 | None:intergenic | 30.0% | |
| TCAAATTCTCGATACGATAT+GGG | - | chr1.3:66704082-66704101 | None:intergenic | 30.0% | |
| TCATTTGAATCAACAATGGA+TGG | - | chr1.3:66704679-66704698 | None:intergenic | 30.0% | |
| TGATGCACACATAATATTAG+AGG | + | chr1.3:66703876-66703895 | MS.gene006014:intron | 30.0% | |
| TGGTGAAAAAATAGAAAACC+TGG | - | chr1.3:66703421-66703440 | None:intergenic | 30.0% | |
| TGTATAACACTCACTTGAAA+GGG | - | chr1.3:66704922-66704941 | None:intergenic | 30.0% | |
| TTCAAATTCTCGATACGATA+TGG | - | chr1.3:66704083-66704102 | None:intergenic | 30.0% | |
| !! | AAATTTCTGAAGCTTAATCG+TGG | + | chr1.3:66704802-66704821 | MS.gene006014:CDS | 30.0% |
| !! | AATTTCTGAAGCTTAATCGT+GGG | + | chr1.3:66704803-66704822 | MS.gene006014:CDS | 30.0% |
| !! | CAAAATTGTTGTTATTTGGG+AGG | - | chr1.3:66703523-66703542 | None:intergenic | 30.0% |
| AAGTATATGAGCTTCATTGG+AGG | + | chr1.3:66704136-66704155 | MS.gene006014:intron | 35.0% | |
| AATGAAATCAAGGATGACAC+GGG | + | chr1.3:66704694-66704713 | MS.gene006014:CDS | 35.0% | |
| ACTTGACACGATATCGATAT+TGG | - | chr1.3:66704120-66704139 | None:intergenic | 35.0% | |
| AGTACTAACTCTACACAGTT+TGG | + | chr1.3:66704206-66704225 | MS.gene006014:intron | 35.0% | |
| AGTATATGAGCTTCATTGGA+GGG | + | chr1.3:66704137-66704156 | MS.gene006014:intron | 35.0% | |
| ATACCAAACATTACCACCAA+TGG | - | chr1.3:66704641-66704660 | None:intergenic | 35.0% | |
| ATTAGGTCGAAAGTTGAAAC+TGG | + | chr1.3:66704174-66704193 | MS.gene006014:intron | 35.0% | |
| CACCTCCAAAAATGAAGAAT+CGG | + | chr1.3:66703916-66703935 | MS.gene006014:intron | 35.0% | |
| CTTGACACGATATCGATATT+GGG | - | chr1.3:66704119-66704138 | None:intergenic | 35.0% | |
| GTACTAACTCTACACAGTTT+GGG | + | chr1.3:66704207-66704226 | MS.gene006014:intron | 35.0% | |
| GTCAAGTATATGAGCTTCAT+TGG | + | chr1.3:66704133-66704152 | MS.gene006014:intron | 35.0% | |
| GTGTATAACACTCACTTGAA+AGG | - | chr1.3:66704923-66704942 | None:intergenic | 35.0% | |
| TAATGTTTGGTATCTTGGAG+TGG | + | chr1.3:66704648-66704667 | MS.gene006014:CDS | 35.0% | |
| TGCCAAGTTTCTTTCATCAA+TGG | - | chr1.3:66704396-66704415 | None:intergenic | 35.0% | |
| TTAGGTCGAAAGTTGAAACT+GGG | + | chr1.3:66704175-66704194 | MS.gene006014:intron | 35.0% | |
| TTGCGTAAAGCTTGAATTTC+TGG | + | chr1.3:66703591-66703610 | MS.gene006014:intron | 35.0% | |
| TTGTATTAACCAAGCAAGTG+TGG | - | chr1.3:66703738-66703757 | None:intergenic | 35.0% | |
| ! | CACAACTTTAAGAAGCACAA+TGG | + | chr1.3:66705069-66705088 | MS.gene006014:CDS | 35.0% |
| ! | TAAGTTAGGACATTTGTTGG+AGG | - | chr1.3:66704514-66704533 | None:intergenic | 35.0% |
| ! | TTTGATATACAGTGGTTTGC+TGG | - | chr1.3:66704348-66704367 | None:intergenic | 35.0% |
| !! | ATTCTTCATTTTTGGAGGTG+CGG | - | chr1.3:66703916-66703935 | None:intergenic | 35.0% |
| !! | TGTTTTTGTGGATGTTGTTG+TGG | + | chr1.3:66704996-66705015 | MS.gene006014:intron | 35.0% |
| !! | TTGATATACAGTGGTTTGCT+GGG | - | chr1.3:66704347-66704366 | None:intergenic | 35.0% |
| !!! | AGACACCGATTCTTCATTTT+TGG | - | chr1.3:66703924-66703943 | None:intergenic | 35.0% |
| !!! | CATTTTTGGAGTATGGATGT+CGG | - | chr1.3:66703956-66703975 | None:intergenic | 35.0% |
| !!! | GAGCAAACATTTTTGGAGTA+TGG | - | chr1.3:66703963-66703982 | None:intergenic | 35.0% |
| AGAAAACCTGGGAATTCCTT+GGG | - | chr1.3:66703409-66703428 | None:intergenic | 40.0% | |
| GTGCTTCTTAAAGTTGTGTG+TGG | - | chr1.3:66705067-66705086 | None:intergenic | 40.0% | |
| TAACACTCACTTGAAAGGGA+AGG | - | chr1.3:66704918-66704937 | None:intergenic | 40.0% | |
| TAGAAAACCTGGGAATTCCT+TGG | - | chr1.3:66703410-66703429 | None:intergenic | 40.0% | |
| ! | GATCCATTGGTGGTAATGTT+TGG | + | chr1.3:66704635-66704654 | MS.gene006014:CDS | 40.0% |
| ! | GGTGGTAATGTTTGGTATCT+TGG | + | chr1.3:66704643-66704662 | MS.gene006014:CDS | 40.0% |
| !! | AGAGCACTGCAAATGAATTC+AGG | - | chr1.3:66704945-66704964 | None:intergenic | 40.0% |
| !! | TTCTTCATTTTTGGAGGTGC+GGG | - | chr1.3:66703915-66703934 | None:intergenic | 40.0% |
| !!! | CACCGATTCTTCATTTTTGG+AGG | - | chr1.3:66703921-66703940 | None:intergenic | 40.0% |
| ACTCAATGCCTTGGATCCAT+TGG | + | chr1.3:66704622-66704641 | MS.gene006014:CDS | 45.0% | |
| CATTACCACCAATGGATCCA+AGG | - | chr1.3:66704633-66704652 | None:intergenic | 45.0% | |
| GAAAGTTGAAACTGGGACAG+AGG | + | chr1.3:66704182-66704201 | MS.gene006014:intron | 45.0% | |
| GCAGTTATCGTGAGATGAAG+GGG | - | chr1.3:66703716-66703735 | None:intergenic | 45.0% | |
| GGCAGTTATCGTGAGATGAA+GGG | - | chr1.3:66703717-66703736 | None:intergenic | 45.0% | |
| TGAAGCTTAATCGTGGGACA+TGG | + | chr1.3:66704809-66704828 | MS.gene006014:CDS | 45.0% | |
| TGGCAGTTATCGTGAGATGA+AGG | - | chr1.3:66703718-66703737 | None:intergenic | 45.0% | |
| ! | AGGACATTTGTTGGAGGACT+TGG | - | chr1.3:66704508-66704527 | None:intergenic | 45.0% |
| !! | AGGTCAAGTTGAGCATCGTT+TGG | - | chr1.3:66703384-66703403 | None:intergenic | 45.0% |
| !! | TCTTCATTTTTGGAGGTGCG+GGG | - | chr1.3:66703914-66703933 | None:intergenic | 45.0% |
| AGCAACTCCGTCAACCTTCA+AGG | + | chr1.3:66703311-66703330 | MS.gene006014:CDS | 50.0% | |
| AGCCTGAAACCTTGAAGACC+TGG | - | chr1.3:66704780-66704799 | None:intergenic | 50.0% | |
| CAATGCCTTGGATCCATTGG+TGG | + | chr1.3:66704625-66704644 | MS.gene006014:CDS | 50.0% | |
| CCGTACTCCTTGAAGGTTGA+CGG | - | chr1.3:66703321-66703340 | None:intergenic | 50.0% | |
| CCGTCAACCTTCAAGGAGTA+CGG | + | chr1.3:66703318-66703337 | MS.gene006014:CDS | 50.0% | |
| CGATAACTGCCACACTTGCT+TGG | + | chr1.3:66703726-66703745 | MS.gene006014:intron | 50.0% | |
| GAAGACCTGGACATCCTCAA+TGG | - | chr1.3:66704767-66704786 | None:intergenic | 50.0% | |
| GACTTAAATAGAGGACCCGC+AGG | - | chr1.3:66704835-66704854 | None:intergenic | 50.0% | |
| GCAAGTGTGACTCAATGCCT+TGG | + | chr1.3:66704613-66704632 | MS.gene006014:CDS | 50.0% | |
| GTCCAGGTCTTCAAGGTTTC+AGG | + | chr1.3:66704775-66704794 | MS.gene006014:CDS | 50.0% | |
| TCAGGTCATTGAGGCTTCAC+CGG | + | chr1.3:66703341-66703360 | MS.gene006014:CDS | 50.0% | |
| TGAGGATGTCCAGGTCTTCA+AGG | + | chr1.3:66704768-66704787 | MS.gene006014:CDS | 50.0% | |
| TTATGTGCCTCCTGCCATTG+AGG | + | chr1.3:66704750-66704769 | MS.gene006014:CDS | 50.0% | |
| ! | AACCTTCAAGGAGTACGGTC+AGG | + | chr1.3:66703323-66703342 | MS.gene006014:CDS | 50.0% |
| ACAGTCGTGAAATCGCGCAG+CGG | + | chr1.3:66704721-66704740 | MS.gene006014:CDS | 55.0% | |
| ACCTCACCCAAGGAATTCCC+AGG | + | chr1.3:66703400-66703419 | MS.gene006014:CDS | 55.0% | |
| ACCTGGACATCCTCAATGGC+AGG | - | chr1.3:66704763-66704782 | None:intergenic | 55.0% | |
| ACCTGGGAATTCCTTGGGTG+AGG | - | chr1.3:66703404-66703423 | None:intergenic | 55.0% | |
| GACCTGACCGTACTCCTTGA+AGG | - | chr1.3:66703328-66703347 | None:intergenic | 55.0% | |
| GCTCAACTTGACCTCACCCA+AGG | + | chr1.3:66703390-66703409 | MS.gene006014:CDS | 55.0% | |
| GGAGTACGGTCAGGTCATTG+AGG | + | chr1.3:66703332-66703351 | MS.gene006014:CDS | 55.0% | |
| GTCATTGAGGCTTCACCGGA+CGG | + | chr1.3:66703345-66703364 | MS.gene006014:CDS | 55.0% | |
| TAATCGTGGGACATGGCCTG+CGG | + | chr1.3:66704816-66704835 | MS.gene006014:CDS | 55.0% | |
| TCCTGCCATTGAGGATGTCC+AGG | + | chr1.3:66704759-66704778 | MS.gene006014:CDS | 55.0% | |
| TGGACATCCTCAATGGCAGG+AGG | - | chr1.3:66704760-66704779 | None:intergenic | 55.0% | |
| AATCGTGGGACATGGCCTGC+GGG | + | chr1.3:66704817-66704836 | MS.gene006014:CDS | 60.0% | |
| GGACCAAACTCCTCGCCGTC+CGG | - | chr1.3:66703363-66703382 | None:intergenic | 65.0% | |
| TCACCGGACGGCGAGGAGTT+TGG | + | chr1.3:66703357-66703376 | MS.gene006014:CDS | 65.0% | |
| ! | TTGGAGGTGCGGGGCTTCAC+AGG | - | chr1.3:66703905-66703924 | None:intergenic | 65.0% |
| TGAGGCTTCACCGGACGGCG+AGG | + | chr1.3:66703350-66703369 | MS.gene006014:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 66703273 | 66705116 | 66703273 | ID=MS.gene006014 |
| chr1.3 | mRNA | 66703273 | 66705116 | 66703273 | ID=MS.gene006014.t1;Parent=MS.gene006014 |
| chr1.3 | exon | 66703273 | 66703421 | 66703273 | ID=MS.gene006014.t1.exon1;Parent=MS.gene006014.t1 |
| chr1.3 | CDS | 66703273 | 66703421 | 66703273 | ID=cds.MS.gene006014.t1;Parent=MS.gene006014.t1 |
| chr1.3 | exon | 66704555 | 66704897 | 66704555 | ID=MS.gene006014.t1.exon2;Parent=MS.gene006014.t1 |
| chr1.3 | CDS | 66704555 | 66704897 | 66704555 | ID=cds.MS.gene006014.t1;Parent=MS.gene006014.t1 |
| chr1.3 | exon | 66705051 | 66705116 | 66705051 | ID=MS.gene006014.t1.exon3;Parent=MS.gene006014.t1 |
| chr1.3 | CDS | 66705051 | 66705116 | 66705051 | ID=cds.MS.gene006014.t1;Parent=MS.gene006014.t1 |
| Gene Sequence |
| Protein sequence |
