Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006015.t1 | XP_003591981.1 | 93.5 | 185 | 12 | 0 | 1 | 185 | 1 | 185 | 1.20E-96 | 362.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006015.t1 | G7I9N5 | 93.5 | 185 | 12 | 0 | 1 | 185 | 1 | 185 | 8.6e-97 | 362.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene041739 | MS.gene006015 | PPI |
| MS.gene043625 | MS.gene006015 | PPI |
| MS.gene041740 | MS.gene006015 | PPI |
| MS.gene059328 | MS.gene006015 | PPI |
| MS.gene006015 | MS.gene041739 | PPI |
| MS.gene041741 | MS.gene006015 | PPI |
| MS.gene33992 | MS.gene006015 | PPI |
| MS.gene006015 | MS.gene33994 | PPI |
| MS.gene006015 | MS.gene043625 | PPI |
| MS.gene006014 | MS.gene006015 | PPI |
| MS.gene006015 | MS.gene006013 | PPI |
| MS.gene33997 | MS.gene006015 | PPI |
| MS.gene54750 | MS.gene006015 | PPI |
| MS.gene006013 | MS.gene006015 | PPI |
| MS.gene33993 | MS.gene006015 | PPI |
| MS.gene33994 | MS.gene006015 | PPI |
| MS.gene038651 | MS.gene006015 | PPI |
| MS.gene059329 | MS.gene006015 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006015.t1 | MTR_1g095900 | 93.514 | 185 | 12 | 0 | 1 | 185 | 1 | 185 | 4.14e-129 | 360 |
| MS.gene006015.t1 | MTR_1g095890 | 81.183 | 186 | 34 | 1 | 1 | 185 | 1 | 186 | 1.03e-110 | 313 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006015.t1 | AT2G35830 | 63.687 | 179 | 63 | 2 | 7 | 184 | 8 | 185 | 4.89e-81 | 239 |
| MS.gene006015.t1 | AT2G35810 | 61.878 | 181 | 62 | 3 | 7 | 184 | 22 | 198 | 1.95e-80 | 238 |
| MS.gene006015.t1 | AT2G35810 | 61.878 | 181 | 62 | 3 | 7 | 184 | 22 | 198 | 1.95e-80 | 238 |
| MS.gene006015.t1 | AT2G35820 | 60.556 | 180 | 65 | 2 | 7 | 184 | 8 | 183 | 2.17e-78 | 232 |
| MS.gene006015.t1 | AT2G35820 | 60.556 | 180 | 65 | 2 | 7 | 184 | 98 | 273 | 1.05e-76 | 231 |
| MS.gene006015.t1 | AT2G35830 | 62.570 | 179 | 60 | 3 | 7 | 184 | 8 | 180 | 7.31e-76 | 225 |
Find 50 sgRNAs with CRISPR-Local
Find 107 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACCAGACAGCCTGGGTTT+TGG | 0.277909 | 1.3:+66707527 | MS.gene006015:CDS |
| GGTGGTAATGTTTGGTATCT+TGG | 0.305200 | 1.3:+66708668 | MS.gene006015:CDS |
| CGGTGAAGCTTGACGAATTT+GGG | 0.309643 | 1.3:-66708824 | None:intergenic |
| GCGGTGAAGCTTGACGAATT+TGG | 0.316031 | 1.3:-66708825 | None:intergenic |
| CGTGAAGGTGGTGACAATTA+AGG | 0.355574 | 1.3:+66707451 | MS.gene006015:CDS |
| CGAGCCTTCACCAGACAGCC+TGG | 0.372861 | 1.3:+66707520 | MS.gene006015:CDS |
| GGTCCATTGGTGGTAATGTT+TGG | 0.421411 | 1.3:+66708660 | MS.gene006015:CDS |
| ATGAAAACCTGGGAATTCCT+TGG | 0.436299 | 1.3:-66707577 | None:intergenic |
| GACCTGAAATCTTGAAAACT+TGG | 0.446401 | 1.3:-66708802 | None:intergenic |
| GGACCAAAACCCAGGCTGTC+TGG | 0.448168 | 1.3:-66707530 | None:intergenic |
| GAGATCAAGTTGAGCATCAT+GGG | 0.463032 | 1.3:-66707552 | None:intergenic |
| ACTCAGTGCCTTGGGTCCAT+TGG | 0.468229 | 1.3:+66708647 | MS.gene006015:CDS |
| TGAAAACCTGGGAATTCCTT+GGG | 0.471791 | 1.3:-66707576 | None:intergenic |
| GTGATTCTAGAAAACTTTAG+TGG | 0.473787 | 1.3:-66708608 | None:intergenic |
| CAGTGCCTTGGGTCCATTGG+TGG | 0.474720 | 1.3:+66708650 | MS.gene006015:CDS |
| ATCTCACCCAAGGAATTCCC+AGG | 0.491993 | 1.3:+66707570 | MS.gene006015:CDS |
| TGAGATCAAGTTGAGCATCA+TGG | 0.496448 | 1.3:-66707553 | None:intergenic |
| CAAATGTGACTCAGTGCCTT+GGG | 0.497185 | 1.3:+66708639 | MS.gene006015:CDS |
| CACCGCGGTACATGGCATGC+TGG | 0.498508 | 1.3:+66708842 | MS.gene006015:CDS |
| TCATTTGAATCAACAACTGA+TGG | 0.498895 | 1.3:-66708701 | None:intergenic |
| TCAAGCTTCACCGCGGTACA+TGG | 0.506906 | 1.3:+66708834 | MS.gene006015:CDS |
| TTATGTTCCTCCCGCCGTTG+AGG | 0.514150 | 1.3:+66708775 | MS.gene006015:CDS |
| CCGTAGTCTTTGAAGTTCGC+CGG | 0.533633 | 1.3:-66707488 | None:intergenic |
| CATCATGGGGACCAAAACCC+AGG | 0.536245 | 1.3:-66707538 | None:intergenic |
| GCAAATGTGACTCAGTGCCT+TGG | 0.539728 | 1.3:+66708638 | MS.gene006015:CDS |
| ATACCAAACATTACCACCAA+TGG | 0.547916 | 1.3:-66708663 | None:intergenic |
| GAGCCTTCACCAGACAGCCT+GGG | 0.557955 | 1.3:+66707521 | MS.gene006015:CDS |
| AAACCCAGGCTGTCTGGTGA+AGG | 0.563612 | 1.3:-66707524 | None:intergenic |
| ACTTGGACGTCCTCAACGGC+GGG | 0.570976 | 1.3:-66708785 | None:intergenic |
| AATGAAATCAAAGATGACTC+AGG | 0.574790 | 1.3:+66708719 | MS.gene006015:CDS |
| TGATTCTAGAAAACTTTAGT+GGG | 0.575199 | 1.3:-66708607 | None:intergenic |
| TAAGGCGATCGAAGCAACTC+CGG | 0.581240 | 1.3:+66707469 | MS.gene006015:CDS |
| CACAACTTTAAGAATGACAA+TGG | 0.590296 | 1.3:+66709099 | MS.gene006015:CDS |
| TAATGTTTGGTATCTTGGAG+TGG | 0.602976 | 1.3:+66708673 | MS.gene006015:CDS |
| GAACTTCAAAGACTACGGTC+AGG | 0.607170 | 1.3:+66707493 | MS.gene006015:CDS |
| AATAATGGAGAGCGTGAAGG+TGG | 0.607965 | 1.3:+66707439 | None:intergenic |
| CATTACCACCAATGGACCCA+AGG | 0.621913 | 1.3:-66708655 | None:intergenic |
| AATAATAATGGAGAGCGTGA+AGG | 0.623264 | 1.3:+66707436 | None:intergenic |
| CCGGCGAACTTCAAAGACTA+CGG | 0.628730 | 1.3:+66707488 | MS.gene006015:CDS |
| TGGACGTCCTCAACGGCGGG+AGG | 0.632229 | 1.3:-66708782 | None:intergenic |
| GCTCAACTTGATCTCACCCA+AGG | 0.638310 | 1.3:+66707560 | MS.gene006015:CDS |
| AACTTGGACGTCCTCAACGG+CGG | 0.650626 | 1.3:-66708786 | None:intergenic |
| ATCGTGCTAGACTTAAATAG+AGG | 0.664302 | 1.3:-66708866 | None:intergenic |
| TCTATTTAAGTCTAGCACGA+TGG | 0.669627 | 1.3:+66708868 | MS.gene006015:CDS |
| GAAAACTTGGACGTCCTCAA+CGG | 0.683782 | 1.3:-66708789 | None:intergenic |
| GACCAGCATGCCATGTACCG+CGG | 0.687313 | 1.3:-66708844 | None:intergenic |
| ACGGTCGTTAAGTCGTGCGG+CGG | 0.689464 | 1.3:+66708746 | MS.gene006015:CDS |
| AAAACGGTCGTTAAGTCGTG+CGG | 0.693454 | 1.3:+66708743 | MS.gene006015:CDS |
| AGATCAAGTTGAGCATCATG+GGG | 0.694936 | 1.3:-66707551 | None:intergenic |
| AAATTCGTCAAGCTTCACCG+CGG | 0.805303 | 1.3:+66708827 | MS.gene006015:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTAACATATAGAATT+TGG | - | chr1.3:66707637-66707656 | None:intergenic | 10.0% |
| !!! | AACTAATTTTAATAATATGT+TGG | - | chr1.3:66708548-66708567 | None:intergenic | 10.0% |
| !!! | ATTTTTTTCACTTTAATTTT+TGG | + | chr1.3:66707659-66707678 | MS.gene006015:intron | 10.0% |
| !!! | TTTTTTTCACTTTAATTTTT+GGG | + | chr1.3:66707660-66707679 | MS.gene006015:intron | 10.0% |
| !! | AGGAAACAAAAAAAAAAAAA+AGG | - | chr1.3:66708279-66708298 | None:intergenic | 15.0% |
| !! | TTAAAGATAACATTTATCTT+TGG | + | chr1.3:66708153-66708172 | MS.gene006015:intron | 15.0% |
| !!! | ATTTTCTTATTTTTGTAAGT+TGG | - | chr1.3:66707609-66707628 | None:intergenic | 15.0% |
| !!! | TAATTTTAATAATATGTTGG+AGG | - | chr1.3:66708545-66708564 | None:intergenic | 15.0% |
| !! | AATGAACTGATATGTTAAAA+AGG | - | chr1.3:66708011-66708030 | None:intergenic | 20.0% |
| !! | AGGAAATATATACATGATAA+TGG | - | chr1.3:66708047-66708066 | None:intergenic | 20.0% |
| !! | GAACTAGTAAAATTTATTAG+AGG | + | chr1.3:66707869-66707888 | MS.gene006015:intron | 20.0% |
| !! | TGAAAAACTTACATTTGTAT+TGG | - | chr1.3:66708915-66708934 | None:intergenic | 20.0% |
| !!! | AAAATTAGTTTGTGTTTTGT+AGG | + | chr1.3:66708558-66708577 | MS.gene006015:intron | 20.0% |
| !!! | AATACAAATGTAAGTTTTTC+AGG | + | chr1.3:66708914-66708933 | MS.gene006015:intron | 20.0% |
| !!! | CCAATAATATATAGTTTTGA+CGG | - | chr1.3:66707952-66707971 | None:intergenic | 20.0% |
| !!! | TTGTCATTTTTTTAATCGTT+TGG | + | chr1.3:66709028-66709047 | MS.gene006015:intron | 20.0% |
| ! | AAATGTGACGATTATTAGTA+TGG | + | chr1.3:66708190-66708209 | MS.gene006015:intron | 25.0% |
| ! | AATGTGACGATTATTAGTAT+GGG | + | chr1.3:66708191-66708210 | MS.gene006015:intron | 25.0% |
| ! | CATTATATTTCACACGAATA+AGG | - | chr1.3:66708067-66708086 | None:intergenic | 25.0% |
| ! | CCGTCAAAACTATATATTAT+TGG | + | chr1.3:66707949-66707968 | MS.gene006015:intron | 25.0% |
| ! | TACTTTATAGCAAAATTGAG+AGG | + | chr1.3:66708365-66708384 | MS.gene006015:intron | 25.0% |
| ! | TATATACTACCCTATTATCT+TGG | + | chr1.3:66708323-66708342 | MS.gene006015:intron | 25.0% |
| !! | ATCTAAGACATACTACAAAA+CGG | - | chr1.3:66707988-66708007 | None:intergenic | 25.0% |
| !! | TGATTCTAGAAAACTTTAGT+GGG | - | chr1.3:66708610-66708629 | None:intergenic | 25.0% |
| !! | TTTGCTATAAAGTAGTTTAG+TGG | - | chr1.3:66708359-66708378 | None:intergenic | 25.0% |
| !!! | TGCTTTTTTATTATGTGTAC+AGG | + | chr1.3:66709059-66709078 | MS.gene006015:intron | 25.0% |
| !!! | TTTCACTTTAATTTTTGGGT+TGG | + | chr1.3:66707664-66707683 | MS.gene006015:intron | 25.0% |
| AATGAAATCAAAGATGACTC+AGG | + | chr1.3:66708719-66708738 | MS.gene006015:CDS | 30.0% | |
| AGATGTAAGATTCCATTGAA+AGG | - | chr1.3:66708942-66708961 | None:intergenic | 30.0% | |
| AGTTTATCCATAGCATCAAA+AGG | - | chr1.3:66708299-66708318 | None:intergenic | 30.0% | |
| ATGTAAGATTCCATTGAAAG+GGG | - | chr1.3:66708940-66708959 | None:intergenic | 30.0% | |
| CTATAAAGTAGTTTAGTGGT+GGG | - | chr1.3:66708355-66708374 | None:intergenic | 30.0% | |
| GATGTAAGATTCCATTGAAA+GGG | - | chr1.3:66708941-66708960 | None:intergenic | 30.0% | |
| GATTATTAGTATGGGACATA+GGG | + | chr1.3:66708199-66708218 | MS.gene006015:intron | 30.0% | |
| TAATAATATGTTGGAGGACT+TGG | - | chr1.3:66708539-66708558 | None:intergenic | 30.0% | |
| TACCTATGATTAAGATCGAA+CGG | - | chr1.3:66707736-66707755 | None:intergenic | 30.0% | |
| TATCAGTTAAATTGAGCTGA+TGG | - | chr1.3:66708467-66708486 | None:intergenic | 30.0% | |
| TCATTTGAATCAACAACTGA+TGG | - | chr1.3:66708704-66708723 | None:intergenic | 30.0% | |
| TTGGTGAAATATGAAAACCT+GGG | - | chr1.3:66707590-66707609 | None:intergenic | 30.0% | |
| ! | CACAACTTTAAGAATGACAA+TGG | + | chr1.3:66709099-66709118 | MS.gene006015:CDS | 30.0% |
| ! | GTGATTCTAGAAAACTTTAG+TGG | - | chr1.3:66708611-66708630 | None:intergenic | 30.0% |
| ! | TTTGTTTCCTTTTGATGCTA+TGG | + | chr1.3:66708289-66708308 | MS.gene006015:intron | 30.0% |
| AACCGTTCGATCTTAATCAT+AGG | + | chr1.3:66707731-66707750 | MS.gene006015:intron | 35.0% | |
| AGAGCATGTCAAATGAATTC+AGG | - | chr1.3:66708973-66708992 | None:intergenic | 35.0% | |
| AGTACCAAGTTTACACTGTT+TGG | + | chr1.3:66708222-66708241 | MS.gene006015:intron | 35.0% | |
| ATACCAAACATTACCACCAA+TGG | - | chr1.3:66708666-66708685 | None:intergenic | 35.0% | |
| ATCGTGCTAGACTTAAATAG+AGG | - | chr1.3:66708869-66708888 | None:intergenic | 35.0% | |
| CAAAGATGACTCAGGAAAAA+CGG | + | chr1.3:66708727-66708746 | MS.gene006015:CDS | 35.0% | |
| CGATTATTAGTATGGGACAT+AGG | + | chr1.3:66708198-66708217 | MS.gene006015:intron | 35.0% | |
| GACCTGAAATCTTGAAAACT+TGG | - | chr1.3:66708805-66708824 | None:intergenic | 35.0% | |
| GCTATAAAGTAGTTTAGTGG+TGG | - | chr1.3:66708356-66708375 | None:intergenic | 35.0% | |
| GTACCAAGTTTACACTGTTT+GGG | + | chr1.3:66708223-66708242 | MS.gene006015:intron | 35.0% | |
| TAATGTTTGGTATCTTGGAG+TGG | + | chr1.3:66708673-66708692 | MS.gene006015:CDS | 35.0% | |
| TATAGCAAAATTGAGAGGCT+AGG | + | chr1.3:66708370-66708389 | MS.gene006015:intron | 35.0% | |
| TCTATTTAAGTCTAGCACGA+TGG | + | chr1.3:66708868-66708887 | MS.gene006015:CDS | 35.0% | |
| TGCAAAGTTTCTTTCTTCGA+TGG | - | chr1.3:66708410-66708429 | None:intergenic | 35.0% | |
| TTGAGCTGATGGAATATGTA+TGG | - | chr1.3:66708456-66708475 | None:intergenic | 35.0% | |
| ! | GTTGGTGAAATATGAAAACC+TGG | - | chr1.3:66707591-66707610 | None:intergenic | 35.0% |
| !! | ATGCTCTTTAGAGTAAGACA+TGG | + | chr1.3:66708986-66709005 | MS.gene006015:intron | 35.0% |
| !! | GGACTTTTACAATCTAGAGT+TGG | + | chr1.3:66708889-66708908 | MS.gene006015:CDS | 35.0% |
| !! | GTCCAAGTTTTCAAGATTTC+AGG | + | chr1.3:66708800-66708819 | MS.gene006015:CDS | 35.0% |
| !! | TGCTCTTTAGAGTAAGACAT+GGG | + | chr1.3:66708987-66709006 | MS.gene006015:intron | 35.0% |
| !! | TTTGGGTTGGATTGATCATT+TGG | + | chr1.3:66707677-66707696 | MS.gene006015:intron | 35.0% |
| ATGAAAACCTGGGAATTCCT+TGG | - | chr1.3:66707580-66707599 | None:intergenic | 40.0% | |
| CAACCCAAACAGTGTAAACT+TGG | - | chr1.3:66708229-66708248 | None:intergenic | 40.0% | |
| GGGTGAATGCCAAGATAATA+GGG | - | chr1.3:66708335-66708354 | None:intergenic | 40.0% | |
| TGAAAACCTGGGAATTCCTT+GGG | - | chr1.3:66707579-66707598 | None:intergenic | 40.0% | |
| TGGGTGAATGCCAAGATAAT+AGG | - | chr1.3:66708336-66708355 | None:intergenic | 40.0% | |
| ! | GGTGGTAATGTTTGGTATCT+TGG | + | chr1.3:66708668-66708687 | MS.gene006015:CDS | 40.0% |
| !! | AGATCAAGTTGAGCATCATG+GGG | - | chr1.3:66707554-66707573 | None:intergenic | 40.0% |
| !! | GAGATCAAGTTGAGCATCAT+GGG | - | chr1.3:66707555-66707574 | None:intergenic | 40.0% |
| !! | TGAGATCAAGTTGAGCATCA+TGG | - | chr1.3:66707556-66707575 | None:intergenic | 40.0% |
| AAAACGGTCGTTAAGTCGTG+CGG | + | chr1.3:66708743-66708762 | MS.gene006015:CDS | 45.0% | |
| AAATTCGTCAAGCTTCACCG+CGG | + | chr1.3:66708827-66708846 | MS.gene006015:CDS | 45.0% | |
| AGCAAAATTGAGAGGCTAGG+AGG | + | chr1.3:66708373-66708392 | MS.gene006015:intron | 45.0% | |
| CAAATGTGACTCAGTGCCTT+GGG | + | chr1.3:66708639-66708658 | MS.gene006015:CDS | 45.0% | |
| CGGTGAAGCTTGACGAATTT+GGG | - | chr1.3:66708827-66708846 | None:intergenic | 45.0% | |
| CGTGAAGGTGGTGACAATTA+AGG | + | chr1.3:66707451-66707470 | MS.gene006015:CDS | 45.0% | |
| GAAAACTTGGACGTCCTCAA+CGG | - | chr1.3:66708792-66708811 | None:intergenic | 45.0% | |
| GAACTTCAAAGACTACGGTC+AGG | + | chr1.3:66707493-66707512 | MS.gene006015:CDS | 45.0% | |
| TGAGAGGCTAGGAGGAATAT+TGG | + | chr1.3:66708381-66708400 | MS.gene006015:intron | 45.0% | |
| ! | GGTCCATTGGTGGTAATGTT+TGG | + | chr1.3:66708660-66708679 | MS.gene006015:CDS | 45.0% |
| !!! | GTTTTTCAGGCCCCTTTCAA+TGG | + | chr1.3:66708927-66708946 | MS.gene006015:intron | 45.0% |
| ATCTCACCCAAGGAATTCCC+AGG | + | chr1.3:66707570-66707589 | MS.gene006015:CDS | 50.0% | |
| CATTACCACCAATGGACCCA+AGG | - | chr1.3:66708658-66708677 | None:intergenic | 50.0% | |
| CCGGCGAACTTCAAAGACTA+CGG | + | chr1.3:66707488-66707507 | MS.gene006015:CDS | 50.0% | |
| GCAAATGTGACTCAGTGCCT+TGG | + | chr1.3:66708638-66708657 | MS.gene006015:CDS | 50.0% | |
| GCGGTGAAGCTTGACGAATT+TGG | - | chr1.3:66708828-66708847 | None:intergenic | 50.0% | |
| GCTCAACTTGATCTCACCCA+AGG | + | chr1.3:66707560-66707579 | MS.gene006015:CDS | 50.0% | |
| TAAGGCGATCGAAGCAACTC+CGG | + | chr1.3:66707469-66707488 | MS.gene006015:CDS | 50.0% | |
| !! | CCGTAGTCTTTGAAGTTCGC+CGG | - | chr1.3:66707491-66707510 | None:intergenic | 50.0% |
| AAACCCAGGCTGTCTGGTGA+AGG | - | chr1.3:66707527-66707546 | None:intergenic | 55.0% | |
| AACTTGGACGTCCTCAACGG+CGG | - | chr1.3:66708789-66708808 | None:intergenic | 55.0% | |
| ACTCAGTGCCTTGGGTCCAT+TGG | + | chr1.3:66708647-66708666 | MS.gene006015:CDS | 55.0% | |
| CATCATGGGGACCAAAACCC+AGG | - | chr1.3:66707541-66707560 | None:intergenic | 55.0% | |
| TCAAGCTTCACCGCGGTACA+TGG | + | chr1.3:66708834-66708853 | MS.gene006015:CDS | 55.0% | |
| TTATGTTCCTCCCGCCGTTG+AGG | + | chr1.3:66708775-66708794 | MS.gene006015:CDS | 55.0% | |
| ! | TCACCAGACAGCCTGGGTTT+TGG | + | chr1.3:66707527-66707546 | MS.gene006015:CDS | 55.0% |
| ACGGTCGTTAAGTCGTGCGG+CGG | + | chr1.3:66708746-66708765 | MS.gene006015:CDS | 60.0% | |
| ACTTGGACGTCCTCAACGGC+GGG | - | chr1.3:66708788-66708807 | None:intergenic | 60.0% | |
| CAGTGCCTTGGGTCCATTGG+TGG | + | chr1.3:66708650-66708669 | MS.gene006015:CDS | 60.0% | |
| GACCAGCATGCCATGTACCG+CGG | - | chr1.3:66708847-66708866 | None:intergenic | 60.0% | |
| GAGCCTTCACCAGACAGCCT+GGG | + | chr1.3:66707521-66707540 | MS.gene006015:CDS | 60.0% | |
| GGACCAAAACCCAGGCTGTC+TGG | - | chr1.3:66707533-66707552 | None:intergenic | 60.0% | |
| CACCGCGGTACATGGCATGC+TGG | + | chr1.3:66708842-66708861 | MS.gene006015:CDS | 65.0% | |
| CGAGCCTTCACCAGACAGCC+TGG | + | chr1.3:66707520-66707539 | MS.gene006015:CDS | 65.0% | |
| TGGACGTCCTCAACGGCGGG+AGG | - | chr1.3:66708785-66708804 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 66707443 | 66709146 | 66707443 | ID=MS.gene006015 |
| chr1.3 | mRNA | 66707443 | 66709146 | 66707443 | ID=MS.gene006015.t1;Parent=MS.gene006015 |
| chr1.3 | exon | 66707443 | 66707591 | 66707443 | ID=MS.gene006015.t1.exon1;Parent=MS.gene006015.t1 |
| chr1.3 | CDS | 66707443 | 66707591 | 66707443 | ID=cds.MS.gene006015.t1;Parent=MS.gene006015.t1 |
| chr1.3 | exon | 66708580 | 66708922 | 66708580 | ID=MS.gene006015.t1.exon2;Parent=MS.gene006015.t1 |
| chr1.3 | CDS | 66708580 | 66708922 | 66708580 | ID=cds.MS.gene006015.t1;Parent=MS.gene006015.t1 |
| chr1.3 | exon | 66709081 | 66709146 | 66709081 | ID=MS.gene006015.t1.exon3;Parent=MS.gene006015.t1 |
| chr1.3 | CDS | 66709081 | 66709146 | 66709081 | ID=cds.MS.gene006015.t1;Parent=MS.gene006015.t1 |
| Gene Sequence |
| Protein sequence |