Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041740.t1 | XP_003591980.1 | 88.7 | 186 | 20 | 1 | 1 | 185 | 1 | 186 | 9.20E-89 | 336.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041740.t1 | G7I9N4 | 88.7 | 186 | 20 | 1 | 1 | 185 | 1 | 186 | 6.6e-89 | 336.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene041740 | MS.gene54750 | PPI |
MS.gene041740 | MS.gene33993 | PPI |
MS.gene059328 | MS.gene041740 | PPI |
MS.gene041740 | MS.gene041741 | PPI |
MS.gene041740 | MS.gene006015 | PPI |
MS.gene041740 | MS.gene33994 | PPI |
MS.gene041740 | MS.gene043625 | PPI |
MS.gene041740 | MS.gene006013 | PPI |
MS.gene006014 | MS.gene041740 | PPI |
MS.gene041740 | MS.gene059329 | PPI |
MS.gene041740 | MS.gene059328 | PPI |
MS.gene33997 | MS.gene041740 | PPI |
MS.gene041740 | MS.gene041739 | PPI |
MS.gene041740 | MS.gene038651 | PPI |
MS.gene059329 | MS.gene041740 | PPI |
MS.gene041740 | MS.gene33992 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041740.t1 | MTR_1g095890 | 88.710 | 186 | 20 | 1 | 1 | 185 | 1 | 186 | 1.26e-120 | 338 |
MS.gene041740.t1 | MTR_1g095900 | 78.919 | 185 | 39 | 0 | 1 | 185 | 1 | 185 | 1.52e-107 | 305 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041740.t1 | AT2G35810 | 63.536 | 181 | 59 | 3 | 7 | 184 | 22 | 198 | 2.02e-83 | 245 |
MS.gene041740.t1 | AT2G35810 | 63.536 | 181 | 59 | 3 | 7 | 184 | 22 | 198 | 2.02e-83 | 245 |
MS.gene041740.t1 | AT2G35820 | 62.778 | 180 | 61 | 2 | 7 | 184 | 8 | 183 | 8.22e-82 | 241 |
MS.gene041740.t1 | AT2G35830 | 64.088 | 181 | 59 | 3 | 7 | 184 | 8 | 185 | 8.64e-81 | 238 |
MS.gene041740.t1 | AT2G35820 | 62.778 | 180 | 61 | 2 | 7 | 184 | 98 | 273 | 4.39e-80 | 239 |
MS.gene041740.t1 | AT2G35830 | 62.983 | 181 | 56 | 4 | 7 | 184 | 8 | 180 | 8.47e-77 | 228 |
Find 50 sgRNAs with CRISPR-Local
Find 124 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTCCAGGTCTTCAAGGTTTC+AGG | 0.178682 | 1.1:+69088103 | MS.gene041740:CDS |
GGTGGTAATGTTTGGTATCT+TGG | 0.305200 | 1.1:+69087971 | MS.gene041740:CDS |
TCACCGGACGGCGAGGAGTT+TGG | 0.361360 | 1.1:+69086685 | MS.gene041740:CDS |
GATCCATTGGTGGTAATGTT+TGG | 0.407930 | 1.1:+69087963 | MS.gene041740:CDS |
TCCTGCCATTGAGGATGTCC+AGG | 0.411710 | 1.1:+69088087 | MS.gene041740:CDS |
TGTTGATTCAAATGAAATCA+AGG | 0.432271 | 1.1:+69088012 | MS.gene041740:CDS |
TGAGGATGTCCAGGTCTTCA+AGG | 0.437020 | 1.1:+69088096 | MS.gene041740:CDS |
TAGAAAACCTGGGAATTCCT+TGG | 0.438964 | 1.1:-69086735 | None:intergenic |
GACCTGACCGTACTCCTTGA+AGG | 0.446533 | 1.1:-69086653 | None:intergenic |
AGCAACTCCGTCAACCTTCA+AGG | 0.460651 | 1.1:+69086639 | MS.gene041740:CDS |
AGAAAACCTGGGAATTCCTT+GGG | 0.474456 | 1.1:-69086734 | None:intergenic |
AGGTCAAGTTGAGCATCGTT+TGG | 0.477044 | 1.1:-69086709 | None:intergenic |
GGACCAAACTCCTCGCCGTC+CGG | 0.492800 | 1.1:-69086688 | None:intergenic |
TCATTTGAATCAACAATGGA+TGG | 0.494781 | 1.1:-69088004 | None:intergenic |
TCTATTTAAGTCTGATACAA+TGG | 0.496626 | 1.1:+69088171 | MS.gene041740:CDS |
ACCTCACCCAAGGAATTCCC+AGG | 0.499024 | 1.1:+69086728 | MS.gene041740:CDS |
CCGTACTCCTTGAAGGTTGA+CGG | 0.504142 | 1.1:-69086646 | None:intergenic |
GTGATATTAGAAAACTTAAG+TGG | 0.517430 | 1.1:-69087911 | None:intergenic |
ACCTGGACATCCTCAATGGC+AGG | 0.518519 | 1.1:-69088088 | None:intergenic |
ACTCAATGCCTTGGATCCAT+TGG | 0.518618 | 1.1:+69087950 | MS.gene041740:CDS |
AACCTTCAAGGAGTACGGTC+AGG | 0.537192 | 1.1:+69086651 | MS.gene041740:CDS |
ACCTGGGAATTCCTTGGGTG+AGG | 0.537872 | 1.1:-69086729 | None:intergenic |
CAATGCCTTGGATCCATTGG+TGG | 0.542939 | 1.1:+69087953 | MS.gene041740:CDS |
ATACCAAACATTACCACCAA+TGG | 0.547916 | 1.1:-69087966 | None:intergenic |
GAAGACCTGGACATCCTCAA+TGG | 0.556353 | 1.1:-69088092 | None:intergenic |
TGAAGCTTAATCGTGGGACA+TGG | 0.559854 | 1.1:+69088137 | MS.gene041740:CDS |
GCAAGTGTGACTCAATGCCT+TGG | 0.560708 | 1.1:+69087941 | MS.gene041740:CDS |
TCAGGTCATTGAGGCTTCAC+CGG | 0.564970 | 1.1:+69086669 | MS.gene041740:CDS |
GATTTCATTTGAATCAACAA+TGG | 0.567401 | 1.1:-69088008 | None:intergenic |
AGCCTGAAACCTTGAAGACC+TGG | 0.571564 | 1.1:-69088105 | None:intergenic |
CCGTCAACCTTCAAGGAGTA+CGG | 0.572133 | 1.1:+69086646 | MS.gene041740:CDS |
TTATGTGCCTCCTGCCATTG+AGG | 0.572418 | 1.1:+69088078 | MS.gene041740:CDS |
GTCATTGAGGCTTCACCGGA+CGG | 0.573850 | 1.1:+69086673 | MS.gene041740:CDS |
AATCGTGGGACATGGCATGC+GGG | 0.581050 | 1.1:+69088145 | MS.gene041740:CDS |
AATTTCTGAAGCTTAATCGT+GGG | 0.591063 | 1.1:+69088131 | MS.gene041740:CDS |
CATTACCACCAATGGATCCA+AGG | 0.593498 | 1.1:-69087958 | None:intergenic |
TGATATTAGAAAACTTAAGT+GGG | 0.595478 | 1.1:-69087910 | None:intergenic |
TAATGTTTGGTATCTTGGAG+TGG | 0.602976 | 1.1:+69087976 | MS.gene041740:CDS |
AAATTTCTGAAGCTTAATCG+TGG | 0.608012 | 1.1:+69088130 | MS.gene041740:CDS |
TAATCGTGGGACATGGCATG+CGG | 0.608942 | 1.1:+69088144 | MS.gene041740:CDS |
ATTGTATCAGACTTAAATAG+AGG | 0.622516 | 1.1:-69088169 | None:intergenic |
GCTCAACTTGACCTCACCCA+AGG | 0.622952 | 1.1:+69086718 | MS.gene041740:CDS |
AAATGAAATCAAGGATGACA+CGG | 0.629245 | 1.1:+69088021 | MS.gene041740:CDS |
TGAGGCTTCACCGGACGGCG+AGG | 0.633096 | 1.1:+69086678 | MS.gene041740:CDS |
GTGCTTCTTAAAGTTGTGTG+TGG | 0.641404 | 1.1:-69088392 | None:intergenic |
CACAACTTTAAGAAGCACAA+TGG | 0.641416 | 1.1:+69088397 | MS.gene041740:CDS |
AATGAAATCAAGGATGACAC+GGG | 0.656842 | 1.1:+69088022 | MS.gene041740:CDS |
GGAGTACGGTCAGGTCATTG+AGG | 0.671075 | 1.1:+69086660 | MS.gene041740:CDS |
ACAGTCGTGAAATCGCGCAA+CGG | 0.675434 | 1.1:+69088049 | MS.gene041740:CDS |
TGGACATCCTCAATGGCAGG+AGG | 0.702078 | 1.1:-69088085 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAAGATATATTATGAAG+AGG | - | chr1.1:69088291-69088310 | None:intergenic | 15.0% |
!! | ATATTATCTTTGTTAAACAT+CGG | + | chr1.1:69087123-69087142 | MS.gene041740:intron | 15.0% |
!! | CAATGATAATAAATTAACAT+TGG | - | chr1.1:69087327-69087346 | None:intergenic | 15.0% |
!! | TAGGAAACAAAAAAAAAATA+TGG | - | chr1.1:69087594-69087613 | None:intergenic | 15.0% |
!!! | TTTATTGTTTTATTTGATGT+TGG | + | chr1.1:69087011-69087030 | MS.gene041740:intron | 15.0% |
!! | AATTGAGAAAAGACTATAAA+TGG | + | chr1.1:69087085-69087104 | MS.gene041740:intron | 20.0% |
!! | ACACATTATTTCAATAAGTT+AGG | - | chr1.1:69087856-69087875 | None:intergenic | 20.0% |
!! | ACATTAAAAGTTTGATAAGT+TGG | - | chr1.1:69086769-69086788 | None:intergenic | 20.0% |
!! | AGAAACTTGAAACTATTATT+TGG | + | chr1.1:69086810-69086829 | MS.gene041740:intron | 20.0% |
!! | TGATATTAGAAAACTTAAGT+GGG | - | chr1.1:69087913-69087932 | None:intergenic | 20.0% |
!!! | AATTTTGTAGATGTCAAATA+TGG | + | chr1.1:69086864-69086883 | MS.gene041740:intron | 20.0% |
!!! | ATTGAAATAATGTGTTTTGT+AGG | + | chr1.1:69087861-69087880 | MS.gene041740:intron | 20.0% |
!!! | CTACAAAATTGTTGTTATTT+GGG | - | chr1.1:69086854-69086873 | None:intergenic | 20.0% |
!!! | TCTACAAAATTGTTGTTATT+TGG | - | chr1.1:69086855-69086874 | None:intergenic | 20.0% |
! | AATTTATGCATAGCATCAAT+AGG | - | chr1.1:69087613-69087632 | None:intergenic | 25.0% |
! | ATGTTGTTGTGGTTTATATA+TGG | + | chr1.1:69088335-69088354 | MS.gene041740:intron | 25.0% |
! | ATTGTATCAGACTTAAATAG+AGG | - | chr1.1:69088172-69088191 | None:intergenic | 25.0% |
! | CTAATCTGTATCTATGATAA+CGG | - | chr1.1:69087163-69087182 | None:intergenic | 25.0% |
! | CTTTACGCAACAATAATTAA+TGG | - | chr1.1:69086909-69086928 | None:intergenic | 25.0% |
! | GAATGCCAAGATAATTAATA+GGG | - | chr1.1:69087651-69087670 | None:intergenic | 25.0% |
! | GATTTCATTTGAATCAACAA+TGG | - | chr1.1:69088011-69088030 | None:intergenic | 25.0% |
! | GTGATATTAGAAAACTTAAG+TGG | - | chr1.1:69087914-69087933 | None:intergenic | 25.0% |
! | TAGTACCCTATTAATTATCT+TGG | + | chr1.1:69087643-69087662 | MS.gene041740:intron | 25.0% |
! | TCTATTTAAGTCTGATACAA+TGG | + | chr1.1:69088171-69088190 | MS.gene041740:CDS | 25.0% |
! | TGAATGCCAAGATAATTAAT+AGG | - | chr1.1:69087652-69087671 | None:intergenic | 25.0% |
!! | TCAAAATGAGCAAACATTTT+TGG | - | chr1.1:69087298-69087317 | None:intergenic | 25.0% |
!!! | GTTTTTTTTATTCTGTGTAC+AGG | + | chr1.1:69088357-69088376 | MS.gene041740:intron | 25.0% |
!!! | TACAAGTTAAATTGAGTTGA+TGG | - | chr1.1:69087780-69087799 | None:intergenic | 25.0% |
!!! | TAGTTTTGATCAACTTTGAT+TGG | + | chr1.1:69086969-69086988 | MS.gene041740:intron | 25.0% |
!!! | TGTCTTTCTTTATGTTTTTG+TGG | + | chr1.1:69088312-69088331 | MS.gene041740:intron | 25.0% |
!!! | TGTTGATTCAAATGAAATCA+AGG | + | chr1.1:69088012-69088031 | MS.gene041740:CDS | 25.0% |
AAATGAAATCAAGGATGACA+CGG | + | chr1.1:69088021-69088040 | MS.gene041740:CDS | 30.0% | |
ATCAAAACTACTACTGAAAG+TGG | - | chr1.1:69086959-69086978 | None:intergenic | 30.0% | |
ATCCATTGATGAAAGAAACT+TGG | + | chr1.1:69087719-69087738 | MS.gene041740:intron | 30.0% | |
ATTTGAGAGGCTAGAAATAT+TGG | + | chr1.1:69087695-69087714 | MS.gene041740:intron | 30.0% | |
CAATAAGTTAGGACATTTGT+TGG | - | chr1.1:69087845-69087864 | None:intergenic | 30.0% | |
CACTGTATATCAAATTTGAG+AGG | + | chr1.1:69087682-69087701 | MS.gene041740:intron | 30.0% | |
CTCTCAAATTTGATATACAG+TGG | - | chr1.1:69087684-69087703 | None:intergenic | 30.0% | |
GATGCACACATAATATTAGA+GGG | + | chr1.1:69087205-69087224 | MS.gene041740:intron | 30.0% | |
GGGTACAATTGAAAACAATT+AGG | + | chr1.1:69087485-69087504 | MS.gene041740:intron | 30.0% | |
GGTGAAAAAATAGAAAACCT+GGG | - | chr1.1:69086748-69086767 | None:intergenic | 30.0% | |
TCAAATTCTCGATACGATAT+GGG | - | chr1.1:69087410-69087429 | None:intergenic | 30.0% | |
TCATTTGAATCAACAATGGA+TGG | - | chr1.1:69088007-69088026 | None:intergenic | 30.0% | |
TGATGCACACATAATATTAG+AGG | + | chr1.1:69087204-69087223 | MS.gene041740:intron | 30.0% | |
TGGTGAAAAAATAGAAAACC+TGG | - | chr1.1:69086749-69086768 | None:intergenic | 30.0% | |
TGTATAACACTCACTTGAAA+GGG | - | chr1.1:69088250-69088269 | None:intergenic | 30.0% | |
TTCAAATTCTCGATACGATA+TGG | - | chr1.1:69087411-69087430 | None:intergenic | 30.0% | |
!! | AAATTTCTGAAGCTTAATCG+TGG | + | chr1.1:69088130-69088149 | MS.gene041740:CDS | 30.0% |
!! | AATTTCTGAAGCTTAATCGT+GGG | + | chr1.1:69088131-69088150 | MS.gene041740:CDS | 30.0% |
!! | CAAAATTGTTGTTATTTGGG+AGG | - | chr1.1:69086851-69086870 | None:intergenic | 30.0% |
AAGTATATGAGCTTCATTGG+AGG | + | chr1.1:69087464-69087483 | MS.gene041740:intron | 35.0% | |
AATGAAATCAAGGATGACAC+GGG | + | chr1.1:69088022-69088041 | MS.gene041740:CDS | 35.0% | |
ACTTGACACGATATCGATAT+TGG | - | chr1.1:69087448-69087467 | None:intergenic | 35.0% | |
AGTACTAACTCTACACAGTT+TGG | + | chr1.1:69087534-69087553 | MS.gene041740:intron | 35.0% | |
AGTATATGAGCTTCATTGGA+GGG | + | chr1.1:69087465-69087484 | MS.gene041740:intron | 35.0% | |
ATACCAAACATTACCACCAA+TGG | - | chr1.1:69087969-69087988 | None:intergenic | 35.0% | |
ATTAGGTCGAAAGTTGAAAC+TGG | + | chr1.1:69087502-69087521 | MS.gene041740:intron | 35.0% | |
CACCTCCAAAAATGAAGAAT+CGG | + | chr1.1:69087244-69087263 | MS.gene041740:intron | 35.0% | |
CTTGACACGATATCGATATT+GGG | - | chr1.1:69087447-69087466 | None:intergenic | 35.0% | |
GTACTAACTCTACACAGTTT+GGG | + | chr1.1:69087535-69087554 | MS.gene041740:intron | 35.0% | |
GTCAAGTATATGAGCTTCAT+TGG | + | chr1.1:69087461-69087480 | MS.gene041740:intron | 35.0% | |
GTGTATAACACTCACTTGAA+AGG | - | chr1.1:69088251-69088270 | None:intergenic | 35.0% | |
TAATGTTTGGTATCTTGGAG+TGG | + | chr1.1:69087976-69087995 | MS.gene041740:CDS | 35.0% | |
TGCCAAGTTTCTTTCATCAA+TGG | - | chr1.1:69087724-69087743 | None:intergenic | 35.0% | |
TTAGGTCGAAAGTTGAAACT+GGG | + | chr1.1:69087503-69087522 | MS.gene041740:intron | 35.0% | |
TTGCGTAAAGCTTGAATTTC+TGG | + | chr1.1:69086919-69086938 | MS.gene041740:intron | 35.0% | |
TTGTATTAACCAAGCAAGTG+TGG | - | chr1.1:69087066-69087085 | None:intergenic | 35.0% | |
! | CACAACTTTAAGAAGCACAA+TGG | + | chr1.1:69088397-69088416 | MS.gene041740:CDS | 35.0% |
! | TAAGTTAGGACATTTGTTGG+AGG | - | chr1.1:69087842-69087861 | None:intergenic | 35.0% |
! | TTTGATATACAGTGGTTTGC+TGG | - | chr1.1:69087676-69087695 | None:intergenic | 35.0% |
!! | ATTCTTCATTTTTGGAGGTG+CGG | - | chr1.1:69087244-69087263 | None:intergenic | 35.0% |
!! | TGTTTTTGTGGATGTTGTTG+TGG | + | chr1.1:69088324-69088343 | MS.gene041740:intron | 35.0% |
!! | TTGATATACAGTGGTTTGCT+GGG | - | chr1.1:69087675-69087694 | None:intergenic | 35.0% |
!!! | AGACACCGATTCTTCATTTT+TGG | - | chr1.1:69087252-69087271 | None:intergenic | 35.0% |
!!! | CATTTTTGGAGTATGGATGT+CGG | - | chr1.1:69087284-69087303 | None:intergenic | 35.0% |
!!! | GAGCAAACATTTTTGGAGTA+TGG | - | chr1.1:69087291-69087310 | None:intergenic | 35.0% |
AGAAAACCTGGGAATTCCTT+GGG | - | chr1.1:69086737-69086756 | None:intergenic | 40.0% | |
AGAGGACTGCAAATGAATTC+AGG | - | chr1.1:69088273-69088292 | None:intergenic | 40.0% | |
GTGCTTCTTAAAGTTGTGTG+TGG | - | chr1.1:69088395-69088414 | None:intergenic | 40.0% | |
TAACACTCACTTGAAAGGGA+AGG | - | chr1.1:69088246-69088265 | None:intergenic | 40.0% | |
TAGAAAACCTGGGAATTCCT+TGG | - | chr1.1:69086738-69086757 | None:intergenic | 40.0% | |
! | GATCCATTGGTGGTAATGTT+TGG | + | chr1.1:69087963-69087982 | MS.gene041740:CDS | 40.0% |
! | GGTGGTAATGTTTGGTATCT+TGG | + | chr1.1:69087971-69087990 | MS.gene041740:CDS | 40.0% |
!! | TTCTTCATTTTTGGAGGTGC+GGG | - | chr1.1:69087243-69087262 | None:intergenic | 40.0% |
!!! | CACCGATTCTTCATTTTTGG+AGG | - | chr1.1:69087249-69087268 | None:intergenic | 40.0% |
ACTCAATGCCTTGGATCCAT+TGG | + | chr1.1:69087950-69087969 | MS.gene041740:CDS | 45.0% | |
CATTACCACCAATGGATCCA+AGG | - | chr1.1:69087961-69087980 | None:intergenic | 45.0% | |
GAAAGTTGAAACTGGGACAG+AGG | + | chr1.1:69087510-69087529 | MS.gene041740:intron | 45.0% | |
GCAGTTATCGTGAGATGAAG+GGG | - | chr1.1:69087044-69087063 | None:intergenic | 45.0% | |
GGCAGTTATCGTGAGATGAA+GGG | - | chr1.1:69087045-69087064 | None:intergenic | 45.0% | |
TGAAGCTTAATCGTGGGACA+TGG | + | chr1.1:69088137-69088156 | MS.gene041740:CDS | 45.0% | |
TGGCAGTTATCGTGAGATGA+AGG | - | chr1.1:69087046-69087065 | None:intergenic | 45.0% | |
! | AGGACATTTGTTGGAGGACT+TGG | - | chr1.1:69087836-69087855 | None:intergenic | 45.0% |
!! | AGGTCAAGTTGAGCATCGTT+TGG | - | chr1.1:69086712-69086731 | None:intergenic | 45.0% |
!! | TCTTCATTTTTGGAGGTGCG+GGG | - | chr1.1:69087242-69087261 | None:intergenic | 45.0% |
ACAGTCGTGAAATCGCGCAA+CGG | + | chr1.1:69088049-69088068 | MS.gene041740:CDS | 50.0% | |
AGCAACTCCGTCAACCTTCA+AGG | + | chr1.1:69086639-69086658 | MS.gene041740:CDS | 50.0% | |
AGCCTGAAACCTTGAAGACC+TGG | - | chr1.1:69088108-69088127 | None:intergenic | 50.0% | |
CAATGCCTTGGATCCATTGG+TGG | + | chr1.1:69087953-69087972 | MS.gene041740:CDS | 50.0% | |
CCGTACTCCTTGAAGGTTGA+CGG | - | chr1.1:69086649-69086668 | None:intergenic | 50.0% | |
CCGTCAACCTTCAAGGAGTA+CGG | + | chr1.1:69086646-69086665 | MS.gene041740:CDS | 50.0% | |
CGATAACTGCCACACTTGCT+TGG | + | chr1.1:69087054-69087073 | MS.gene041740:intron | 50.0% | |
GAAGACCTGGACATCCTCAA+TGG | - | chr1.1:69088095-69088114 | None:intergenic | 50.0% | |
GCAAGTGTGACTCAATGCCT+TGG | + | chr1.1:69087941-69087960 | MS.gene041740:CDS | 50.0% | |
GTCCAGGTCTTCAAGGTTTC+AGG | + | chr1.1:69088103-69088122 | MS.gene041740:CDS | 50.0% | |
TAATCGTGGGACATGGCATG+CGG | + | chr1.1:69088144-69088163 | MS.gene041740:CDS | 50.0% | |
TCAGGTCATTGAGGCTTCAC+CGG | + | chr1.1:69086669-69086688 | MS.gene041740:CDS | 50.0% | |
TGAGGATGTCCAGGTCTTCA+AGG | + | chr1.1:69088096-69088115 | MS.gene041740:CDS | 50.0% | |
TTATGTGCCTCCTGCCATTG+AGG | + | chr1.1:69088078-69088097 | MS.gene041740:CDS | 50.0% | |
! | AACCTTCAAGGAGTACGGTC+AGG | + | chr1.1:69086651-69086670 | MS.gene041740:CDS | 50.0% |
AATCGTGGGACATGGCATGC+GGG | + | chr1.1:69088145-69088164 | MS.gene041740:CDS | 55.0% | |
ACCTCACCCAAGGAATTCCC+AGG | + | chr1.1:69086728-69086747 | MS.gene041740:CDS | 55.0% | |
ACCTGGACATCCTCAATGGC+AGG | - | chr1.1:69088091-69088110 | None:intergenic | 55.0% | |
ACCTGGGAATTCCTTGGGTG+AGG | - | chr1.1:69086732-69086751 | None:intergenic | 55.0% | |
GACCTGACCGTACTCCTTGA+AGG | - | chr1.1:69086656-69086675 | None:intergenic | 55.0% | |
GCTCAACTTGACCTCACCCA+AGG | + | chr1.1:69086718-69086737 | MS.gene041740:CDS | 55.0% | |
GGAGTACGGTCAGGTCATTG+AGG | + | chr1.1:69086660-69086679 | MS.gene041740:CDS | 55.0% | |
GTCATTGAGGCTTCACCGGA+CGG | + | chr1.1:69086673-69086692 | MS.gene041740:CDS | 55.0% | |
TCCTGCCATTGAGGATGTCC+AGG | + | chr1.1:69088087-69088106 | MS.gene041740:CDS | 55.0% | |
TGGACATCCTCAATGGCAGG+AGG | - | chr1.1:69088088-69088107 | None:intergenic | 55.0% | |
GGACCAAACTCCTCGCCGTC+CGG | - | chr1.1:69086691-69086710 | None:intergenic | 65.0% | |
TCACCGGACGGCGAGGAGTT+TGG | + | chr1.1:69086685-69086704 | MS.gene041740:CDS | 65.0% | |
! | TTGGAGGTGCGGGGCTTCAC+AGG | - | chr1.1:69087233-69087252 | None:intergenic | 65.0% |
TGAGGCTTCACCGGACGGCG+AGG | + | chr1.1:69086678-69086697 | MS.gene041740:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 69086601 | 69088444 | 69086601 | ID=MS.gene041740 |
chr1.1 | mRNA | 69086601 | 69088444 | 69086601 | ID=MS.gene041740.t1;Parent=MS.gene041740 |
chr1.1 | exon | 69086601 | 69086749 | 69086601 | ID=MS.gene041740.t1.exon1;Parent=MS.gene041740.t1 |
chr1.1 | CDS | 69086601 | 69086749 | 69086601 | ID=cds.MS.gene041740.t1;Parent=MS.gene041740.t1 |
chr1.1 | exon | 69087883 | 69088225 | 69087883 | ID=MS.gene041740.t1.exon2;Parent=MS.gene041740.t1 |
chr1.1 | CDS | 69087883 | 69088225 | 69087883 | ID=cds.MS.gene041740.t1;Parent=MS.gene041740.t1 |
chr1.1 | exon | 69088379 | 69088444 | 69088379 | ID=MS.gene041740.t1.exon3;Parent=MS.gene041740.t1 |
chr1.1 | CDS | 69088379 | 69088444 | 69088379 | ID=cds.MS.gene041740.t1;Parent=MS.gene041740.t1 |
Gene Sequence |
Protein sequence |