Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041739.t1 | XP_003591981.1 | 93 | 185 | 13 | 0 | 1 | 185 | 1 | 185 | 3.50E-96 | 360.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041739.t1 | G7I9N5 | 93.0 | 185 | 13 | 0 | 1 | 185 | 1 | 185 | 2.5e-96 | 360.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene041739 | MS.gene006015 | PPI |
MS.gene059328 | MS.gene041739 | PPI |
MS.gene041741 | MS.gene041739 | PPI |
MS.gene041739 | MS.gene043625 | PPI |
MS.gene33992 | MS.gene041739 | PPI |
MS.gene006015 | MS.gene041739 | PPI |
MS.gene041739 | MS.gene006013 | PPI |
MS.gene041739 | MS.gene33994 | PPI |
MS.gene006014 | MS.gene041739 | PPI |
MS.gene006013 | MS.gene041739 | PPI |
MS.gene33997 | MS.gene041739 | PPI |
MS.gene54750 | MS.gene041739 | PPI |
MS.gene33993 | MS.gene041739 | PPI |
MS.gene33994 | MS.gene041739 | PPI |
MS.gene043625 | MS.gene041739 | PPI |
MS.gene041740 | MS.gene041739 | PPI |
MS.gene038651 | MS.gene041739 | PPI |
MS.gene059329 | MS.gene041739 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041739.t1 | MTR_1g095900 | 92.973 | 185 | 13 | 0 | 1 | 185 | 1 | 185 | 4.68e-128 | 357 |
MS.gene041739.t1 | MTR_1g095890 | 80.108 | 186 | 36 | 1 | 1 | 185 | 1 | 186 | 3.36e-109 | 310 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041739.t1 | AT2G35830 | 63.128 | 179 | 64 | 2 | 7 | 184 | 8 | 185 | 4.46e-80 | 236 |
MS.gene041739.t1 | AT2G35810 | 61.326 | 181 | 63 | 3 | 7 | 184 | 22 | 198 | 1.34e-79 | 235 |
MS.gene041739.t1 | AT2G35810 | 61.326 | 181 | 63 | 3 | 7 | 184 | 22 | 198 | 1.34e-79 | 235 |
MS.gene041739.t1 | AT2G35820 | 59.444 | 180 | 67 | 2 | 7 | 184 | 8 | 183 | 5.48e-77 | 228 |
MS.gene041739.t1 | AT2G35820 | 59.444 | 180 | 67 | 2 | 7 | 184 | 98 | 273 | 3.10e-75 | 227 |
MS.gene041739.t1 | AT2G35830 | 62.011 | 179 | 61 | 3 | 7 | 184 | 8 | 180 | 5.48e-75 | 223 |
Find 50 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCACCAGACAGCCTGGGTTT+TGG | 0.277909 | 1.1:+69090857 | MS.gene041739:CDS |
GGTGGTAATGTTTGGTATCT+TGG | 0.305200 | 1.1:+69091997 | MS.gene041739:CDS |
CGGTGAAGCTTGACGAATTT+GGG | 0.309643 | 1.1:-69092153 | None:intergenic |
GCGGTGAAGCTTGACGAATT+TGG | 0.316031 | 1.1:-69092154 | None:intergenic |
CGTGAAGGTGGTGACAATTA+AGG | 0.355574 | 1.1:+69090781 | MS.gene041739:CDS |
CGAGCCTTCACCAGACAGCC+TGG | 0.372861 | 1.1:+69090850 | MS.gene041739:CDS |
GGTCCATTGGTGGTAATGTT+TGG | 0.421411 | 1.1:+69091989 | MS.gene041739:CDS |
ATGAAAACCTGGGAATTCCT+TGG | 0.436299 | 1.1:-69090907 | None:intergenic |
GACCTGAAATCTTGAAAACT+TGG | 0.446401 | 1.1:-69092131 | None:intergenic |
GGACCAAAACCCAGGCTGTC+TGG | 0.448168 | 1.1:-69090860 | None:intergenic |
GAGATCAAGTTGAGCATCAT+GGG | 0.463032 | 1.1:-69090882 | None:intergenic |
ACTCAGTGCCTTGGGTCCAT+TGG | 0.468229 | 1.1:+69091976 | MS.gene041739:CDS |
TGAAAACCTGGGAATTCCTT+GGG | 0.471791 | 1.1:-69090906 | None:intergenic |
GTGATTCTAGAAAACTTTAG+TGG | 0.473787 | 1.1:-69091937 | None:intergenic |
CAGTGCCTTGGGTCCATTGG+TGG | 0.474720 | 1.1:+69091979 | MS.gene041739:CDS |
ATCTCACCCAAGGAATTCCC+AGG | 0.491993 | 1.1:+69090900 | MS.gene041739:CDS |
TGAGATCAAGTTGAGCATCA+TGG | 0.496448 | 1.1:-69090883 | None:intergenic |
CAAATGTGACTCAGTGCCTT+GGG | 0.497185 | 1.1:+69091968 | MS.gene041739:CDS |
CACCGCGGTACATGGCATGC+TGG | 0.498508 | 1.1:+69092171 | MS.gene041739:CDS |
TCATTTGAATCAACAACTGA+TGG | 0.498895 | 1.1:-69092030 | None:intergenic |
TCAAGCTTCACCGCGGTACA+TGG | 0.506906 | 1.1:+69092163 | MS.gene041739:CDS |
CCGTAGTCTTTGAAGTTCGC+CGG | 0.533633 | 1.1:-69090818 | None:intergenic |
CATCATGGGGACCAAAACCC+AGG | 0.536245 | 1.1:-69090868 | None:intergenic |
GCAAATGTGACTCAGTGCCT+TGG | 0.539728 | 1.1:+69091967 | MS.gene041739:CDS |
ATACCAAACATTACCACCAA+TGG | 0.547916 | 1.1:-69091992 | None:intergenic |
GAGCCTTCACCAGACAGCCT+GGG | 0.557955 | 1.1:+69090851 | MS.gene041739:CDS |
AAACCCAGGCTGTCTGGTGA+AGG | 0.563612 | 1.1:-69090854 | None:intergenic |
AATGAAATCAAAGATGACTC+AGG | 0.574790 | 1.1:+69092048 | MS.gene041739:CDS |
TGATTCTAGAAAACTTTAGT+GGG | 0.575199 | 1.1:-69091936 | None:intergenic |
TAAGGCGATCGAAGCAACTC+CGG | 0.581240 | 1.1:+69090799 | MS.gene041739:CDS |
TTATGTTCCTCCCACCGTTG+AGG | 0.588581 | 1.1:+69092104 | MS.gene041739:CDS |
CACAACTTTAAGAATGACAA+TGG | 0.590296 | 1.1:+69092429 | MS.gene041739:CDS |
GGACTTCTACAATCTAGAGT+TGG | 0.602394 | 1.1:+69092218 | MS.gene041739:CDS |
TAATGTTTGGTATCTTGGAG+TGG | 0.602976 | 1.1:+69092002 | MS.gene041739:CDS |
AACTTGGACGTCCTCAACGG+TGG | 0.605196 | 1.1:-69092115 | None:intergenic |
AATAATGGAGAGCGTGAAGG+TGG | 0.607965 | 1.1:+69090769 | None:intergenic |
CATTACCACCAATGGACCCA+AGG | 0.621913 | 1.1:-69091984 | None:intergenic |
AATAATAATGGAGAGCGTGA+AGG | 0.623264 | 1.1:+69090766 | None:intergenic |
GAAAACTTGGACGTCCTCAA+CGG | 0.628183 | 1.1:-69092118 | None:intergenic |
CCGGCGAACTTCAAAGACTA+CGG | 0.628730 | 1.1:+69090818 | MS.gene041739:CDS |
TGGACGTCCTCAACGGTGGG+AGG | 0.630671 | 1.1:-69092111 | None:intergenic |
ACTTGGACGTCCTCAACGGT+GGG | 0.633042 | 1.1:-69092114 | None:intergenic |
GCTCAACTTGATCTCACCCA+AGG | 0.638310 | 1.1:+69090890 | MS.gene041739:CDS |
ATCGTGCTAGACTTAAATAG+AGG | 0.664302 | 1.1:-69092195 | None:intergenic |
TCTATTTAAGTCTAGCACGA+TGG | 0.669627 | 1.1:+69092197 | MS.gene041739:CDS |
GACCAGCATGCCATGTACCG+CGG | 0.687313 | 1.1:-69092173 | None:intergenic |
ACGGTCGTTAAGTCGTGCGG+CGG | 0.689464 | 1.1:+69092075 | MS.gene041739:CDS |
AAAACGGTCGTTAAGTCGTG+CGG | 0.693454 | 1.1:+69092072 | MS.gene041739:CDS |
AGATCAAGTTGAGCATCATG+GGG | 0.694936 | 1.1:-69090881 | None:intergenic |
AAATTCGTCAAGCTTCACCG+CGG | 0.805303 | 1.1:+69092156 | MS.gene041739:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATTAACATATAGAATT+TGG | - | chr1.1:69090967-69090986 | None:intergenic | 10.0% |
!!! | AACTAATTTTAATAATATGT+TGG | - | chr1.1:69091877-69091896 | None:intergenic | 10.0% |
!!! | ATTTTTTTCACTTTAATTTT+TGG | + | chr1.1:69090989-69091008 | MS.gene041739:intron | 10.0% |
!!! | TTTTTTTCACTTTAATTTTT+GGG | + | chr1.1:69090990-69091009 | MS.gene041739:intron | 10.0% |
!! | AAGGAAACAAAAAAAAAAAA+AGG | - | chr1.1:69091609-69091628 | None:intergenic | 15.0% |
!! | TTAAAGATAACATTTATCTT+TGG | + | chr1.1:69091483-69091502 | MS.gene041739:intron | 15.0% |
!!! | ATTTTCTTATTTTTGTAAGT+TGG | - | chr1.1:69090939-69090958 | None:intergenic | 15.0% |
!!! | TAATTTTAATAATATGTTGG+AGG | - | chr1.1:69091874-69091893 | None:intergenic | 15.0% |
!! | AATGAACTGATATGTTAAAA+AGG | - | chr1.1:69091341-69091360 | None:intergenic | 20.0% |
!! | AGGAAATATATACATGATAA+TGG | - | chr1.1:69091377-69091396 | None:intergenic | 20.0% |
!! | GAACTAGTAAAATTTATTAG+AGG | + | chr1.1:69091199-69091218 | MS.gene041739:intron | 20.0% |
!! | TGAAAAACTTACATTTGTAT+TGG | - | chr1.1:69092244-69092263 | None:intergenic | 20.0% |
!!! | AAAATTAGTTTGTGTTTTGT+AGG | + | chr1.1:69091887-69091906 | MS.gene041739:intron | 20.0% |
!!! | AATACAAATGTAAGTTTTTC+AGG | + | chr1.1:69092243-69092262 | MS.gene041739:intron | 20.0% |
!!! | CCAATAATATATAGTTTTGA+CGG | - | chr1.1:69091282-69091301 | None:intergenic | 20.0% |
!!! | TGTCATTTTTTTTAATCGTT+TGG | + | chr1.1:69092358-69092377 | MS.gene041739:intron | 20.0% |
!!! | TTTTTTTTGTTTCCTTTTGA+TGG | + | chr1.1:69091613-69091632 | MS.gene041739:intron | 20.0% |
! | AAATGTGACGATTATTAGTA+TGG | + | chr1.1:69091520-69091539 | MS.gene041739:intron | 25.0% |
! | AATGTGACGATTATTAGTAT+GGG | + | chr1.1:69091521-69091540 | MS.gene041739:intron | 25.0% |
! | CATTATATTTCACACGAATA+AGG | - | chr1.1:69091397-69091416 | None:intergenic | 25.0% |
! | CCGTCAAAACTATATATTAT+TGG | + | chr1.1:69091279-69091298 | MS.gene041739:intron | 25.0% |
! | TACTTTATAGCAAAATTGAG+AGG | + | chr1.1:69091694-69091713 | MS.gene041739:intron | 25.0% |
! | TATATACTACCCTATTATCT+TGG | + | chr1.1:69091652-69091671 | MS.gene041739:intron | 25.0% |
!! | ATCTAAGACATACTACAAAA+CGG | - | chr1.1:69091318-69091337 | None:intergenic | 25.0% |
!! | TGATTCTAGAAAACTTTAGT+GGG | - | chr1.1:69091939-69091958 | None:intergenic | 25.0% |
!! | TTTGCTATAAAGTAGTTTAG+TGG | - | chr1.1:69091688-69091707 | None:intergenic | 25.0% |
!!! | TGCTTTTTTATTATGTGTAC+AGG | + | chr1.1:69092389-69092408 | MS.gene041739:intron | 25.0% |
!!! | TTTCACTTTAATTTTTGGGT+TGG | + | chr1.1:69090994-69091013 | MS.gene041739:intron | 25.0% |
AATGAAATCAAAGATGACTC+AGG | + | chr1.1:69092048-69092067 | MS.gene041739:CDS | 30.0% | |
AGATGTAAGATTCCATTGAA+AGG | - | chr1.1:69092271-69092290 | None:intergenic | 30.0% | |
AGTTTATCCATACCATCAAA+AGG | - | chr1.1:69091628-69091647 | None:intergenic | 30.0% | |
ATGTAAGATTCCATTGAAAG+GGG | - | chr1.1:69092269-69092288 | None:intergenic | 30.0% | |
CTATAAAGTAGTTTAGTGGT+GGG | - | chr1.1:69091684-69091703 | None:intergenic | 30.0% | |
GATGTAAGATTCCATTGAAA+GGG | - | chr1.1:69092270-69092289 | None:intergenic | 30.0% | |
GATTATTAGTATGGGACATA+GGG | + | chr1.1:69091529-69091548 | MS.gene041739:intron | 30.0% | |
TAATAATATGTTGGAGGACT+TGG | - | chr1.1:69091868-69091887 | None:intergenic | 30.0% | |
TACCTATGATTAAGATCGAA+CGG | - | chr1.1:69091066-69091085 | None:intergenic | 30.0% | |
TATCAGTTAAATTGAGCTGA+TGG | - | chr1.1:69091796-69091815 | None:intergenic | 30.0% | |
TCATTTGAATCAACAACTGA+TGG | - | chr1.1:69092033-69092052 | None:intergenic | 30.0% | |
TTGGTGAAATATGAAAACCT+GGG | - | chr1.1:69090920-69090939 | None:intergenic | 30.0% | |
! | CACAACTTTAAGAATGACAA+TGG | + | chr1.1:69092429-69092448 | MS.gene041739:CDS | 30.0% |
! | GTGATTCTAGAAAACTTTAG+TGG | - | chr1.1:69091940-69091959 | None:intergenic | 30.0% |
!! | TTTGTTTCCTTTTGATGGTA+TGG | + | chr1.1:69091618-69091637 | MS.gene041739:intron | 30.0% |
AACCGTTCGATCTTAATCAT+AGG | + | chr1.1:69091061-69091080 | MS.gene041739:intron | 35.0% | |
AGAGCATGTCAAATGAATTC+AGG | - | chr1.1:69092302-69092321 | None:intergenic | 35.0% | |
AGTACCAAGTTTACACTGTT+TGG | + | chr1.1:69091552-69091571 | MS.gene041739:intron | 35.0% | |
ATACCAAACATTACCACCAA+TGG | - | chr1.1:69091995-69092014 | None:intergenic | 35.0% | |
ATCGTGCTAGACTTAAATAG+AGG | - | chr1.1:69092198-69092217 | None:intergenic | 35.0% | |
CAAAGATGACTCAGGAAAAA+CGG | + | chr1.1:69092056-69092075 | MS.gene041739:CDS | 35.0% | |
CGATTATTAGTATGGGACAT+AGG | + | chr1.1:69091528-69091547 | MS.gene041739:intron | 35.0% | |
GACCTGAAATCTTGAAAACT+TGG | - | chr1.1:69092134-69092153 | None:intergenic | 35.0% | |
GCTATAAAGTAGTTTAGTGG+TGG | - | chr1.1:69091685-69091704 | None:intergenic | 35.0% | |
GTACCAAGTTTACACTGTTT+GGG | + | chr1.1:69091553-69091572 | MS.gene041739:intron | 35.0% | |
TAATGTTTGGTATCTTGGAG+TGG | + | chr1.1:69092002-69092021 | MS.gene041739:CDS | 35.0% | |
TATAGCAAAATTGAGAGGCT+AGG | + | chr1.1:69091699-69091718 | MS.gene041739:intron | 35.0% | |
TCTATTTAAGTCTAGCACGA+TGG | + | chr1.1:69092197-69092216 | MS.gene041739:CDS | 35.0% | |
TGCAAAGTTTCTTTCTTCGA+TGG | - | chr1.1:69091739-69091758 | None:intergenic | 35.0% | |
! | GTTGGTGAAATATGAAAACC+TGG | - | chr1.1:69090921-69090940 | None:intergenic | 35.0% |
!! | ATGCTCTTTAGAGTAAGACA+TGG | + | chr1.1:69092315-69092334 | MS.gene041739:intron | 35.0% |
!! | GTCCAAGTTTTCAAGATTTC+AGG | + | chr1.1:69092129-69092148 | MS.gene041739:CDS | 35.0% |
!! | TGCTCTTTAGAGTAAGACAT+GGG | + | chr1.1:69092316-69092335 | MS.gene041739:intron | 35.0% |
!! | TTTGGGTTGGATTGATCATT+TGG | + | chr1.1:69091007-69091026 | MS.gene041739:intron | 35.0% |
ATGAAAACCTGGGAATTCCT+TGG | - | chr1.1:69090910-69090929 | None:intergenic | 40.0% | |
CAACCCAAACAGTGTAAACT+TGG | - | chr1.1:69091559-69091578 | None:intergenic | 40.0% | |
GGGTGAATGCCAAGATAATA+GGG | - | chr1.1:69091664-69091683 | None:intergenic | 40.0% | |
TGAAAACCTGGGAATTCCTT+GGG | - | chr1.1:69090909-69090928 | None:intergenic | 40.0% | |
TGGGTGAATGCCAAGATAAT+AGG | - | chr1.1:69091665-69091684 | None:intergenic | 40.0% | |
! | GGACTTCTACAATCTAGAGT+TGG | + | chr1.1:69092218-69092237 | MS.gene041739:CDS | 40.0% |
! | GGTGGTAATGTTTGGTATCT+TGG | + | chr1.1:69091997-69092016 | MS.gene041739:CDS | 40.0% |
!! | AGATCAAGTTGAGCATCATG+GGG | - | chr1.1:69090884-69090903 | None:intergenic | 40.0% |
!! | GAGATCAAGTTGAGCATCAT+GGG | - | chr1.1:69090885-69090904 | None:intergenic | 40.0% |
!! | TGAGATCAAGTTGAGCATCA+TGG | - | chr1.1:69090886-69090905 | None:intergenic | 40.0% |
AAAACGGTCGTTAAGTCGTG+CGG | + | chr1.1:69092072-69092091 | MS.gene041739:CDS | 45.0% | |
AAATTCGTCAAGCTTCACCG+CGG | + | chr1.1:69092156-69092175 | MS.gene041739:CDS | 45.0% | |
AGCAAAATTGAGAGGCTAGG+AGG | + | chr1.1:69091702-69091721 | MS.gene041739:intron | 45.0% | |
CAAATGTGACTCAGTGCCTT+GGG | + | chr1.1:69091968-69091987 | MS.gene041739:CDS | 45.0% | |
CGGTGAAGCTTGACGAATTT+GGG | - | chr1.1:69092156-69092175 | None:intergenic | 45.0% | |
CGTGAAGGTGGTGACAATTA+AGG | + | chr1.1:69090781-69090800 | MS.gene041739:CDS | 45.0% | |
GAAAACTTGGACGTCCTCAA+CGG | - | chr1.1:69092121-69092140 | None:intergenic | 45.0% | |
TGAGAGGCTAGGAGGAATAT+TGG | + | chr1.1:69091710-69091729 | MS.gene041739:intron | 45.0% | |
! | GGTCCATTGGTGGTAATGTT+TGG | + | chr1.1:69091989-69092008 | MS.gene041739:CDS | 45.0% |
!!! | GTTTTTCAGGCCCCTTTCAA+TGG | + | chr1.1:69092256-69092275 | MS.gene041739:intron | 45.0% |
ATCTCACCCAAGGAATTCCC+AGG | + | chr1.1:69090900-69090919 | MS.gene041739:CDS | 50.0% | |
CATTACCACCAATGGACCCA+AGG | - | chr1.1:69091987-69092006 | None:intergenic | 50.0% | |
CCGGCGAACTTCAAAGACTA+CGG | + | chr1.1:69090818-69090837 | MS.gene041739:CDS | 50.0% | |
GCAAATGTGACTCAGTGCCT+TGG | + | chr1.1:69091967-69091986 | MS.gene041739:CDS | 50.0% | |
GCGGTGAAGCTTGACGAATT+TGG | - | chr1.1:69092157-69092176 | None:intergenic | 50.0% | |
GCTCAACTTGATCTCACCCA+AGG | + | chr1.1:69090890-69090909 | MS.gene041739:CDS | 50.0% | |
TAAGGCGATCGAAGCAACTC+CGG | + | chr1.1:69090799-69090818 | MS.gene041739:CDS | 50.0% | |
TTATGTTCCTCCCACCGTTG+AGG | + | chr1.1:69092104-69092123 | MS.gene041739:CDS | 50.0% | |
!! | CCGTAGTCTTTGAAGTTCGC+CGG | - | chr1.1:69090821-69090840 | None:intergenic | 50.0% |
AAACCCAGGCTGTCTGGTGA+AGG | - | chr1.1:69090857-69090876 | None:intergenic | 55.0% | |
AACTTGGACGTCCTCAACGG+TGG | - | chr1.1:69092118-69092137 | None:intergenic | 55.0% | |
ACTCAGTGCCTTGGGTCCAT+TGG | + | chr1.1:69091976-69091995 | MS.gene041739:CDS | 55.0% | |
ACTTGGACGTCCTCAACGGT+GGG | - | chr1.1:69092117-69092136 | None:intergenic | 55.0% | |
CATCATGGGGACCAAAACCC+AGG | - | chr1.1:69090871-69090890 | None:intergenic | 55.0% | |
TCAAGCTTCACCGCGGTACA+TGG | + | chr1.1:69092163-69092182 | MS.gene041739:CDS | 55.0% | |
! | TCACCAGACAGCCTGGGTTT+TGG | + | chr1.1:69090857-69090876 | MS.gene041739:CDS | 55.0% |
ACGGTCGTTAAGTCGTGCGG+CGG | + | chr1.1:69092075-69092094 | MS.gene041739:CDS | 60.0% | |
CAGTGCCTTGGGTCCATTGG+TGG | + | chr1.1:69091979-69091998 | MS.gene041739:CDS | 60.0% | |
GACCAGCATGCCATGTACCG+CGG | - | chr1.1:69092176-69092195 | None:intergenic | 60.0% | |
GAGCCTTCACCAGACAGCCT+GGG | + | chr1.1:69090851-69090870 | MS.gene041739:CDS | 60.0% | |
GGACCAAAACCCAGGCTGTC+TGG | - | chr1.1:69090863-69090882 | None:intergenic | 60.0% | |
CACCGCGGTACATGGCATGC+TGG | + | chr1.1:69092171-69092190 | MS.gene041739:CDS | 65.0% | |
CGAGCCTTCACCAGACAGCC+TGG | + | chr1.1:69090850-69090869 | MS.gene041739:CDS | 65.0% | |
TGGACGTCCTCAACGGTGGG+AGG | - | chr1.1:69092114-69092133 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 69090773 | 69092476 | 69090773 | ID=MS.gene041739 |
chr1.1 | mRNA | 69090773 | 69092476 | 69090773 | ID=MS.gene041739.t1;Parent=MS.gene041739 |
chr1.1 | exon | 69090773 | 69090921 | 69090773 | ID=MS.gene041739.t1.exon1;Parent=MS.gene041739.t1 |
chr1.1 | CDS | 69090773 | 69090921 | 69090773 | ID=cds.MS.gene041739.t1;Parent=MS.gene041739.t1 |
chr1.1 | exon | 69091909 | 69092251 | 69091909 | ID=MS.gene041739.t1.exon2;Parent=MS.gene041739.t1 |
chr1.1 | CDS | 69091909 | 69092251 | 69091909 | ID=cds.MS.gene041739.t1;Parent=MS.gene041739.t1 |
chr1.1 | exon | 69092411 | 69092476 | 69092411 | ID=MS.gene041739.t1.exon3;Parent=MS.gene041739.t1 |
chr1.1 | CDS | 69092411 | 69092476 | 69092411 | ID=cds.MS.gene041739.t1;Parent=MS.gene041739.t1 |
Gene Sequence |
Protein sequence |