AlfalfaGEDB | MS.gene54750

M. sativa cultivar XinJiangDaYe / MS.gene54750

KEGG: -
GO: GO:0003674 GO:0003824 GO:0004848 GO:0016787 GO:0016810 GO:0016813
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene54750.t1	XP_003591980.1	92.8	180	12	1	4	182	7	186	1.90E-91	345.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene54750.t1	G7I9N4	92.8	180	12	1	4	182	7	186	1.4e-91	345.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene041740	MS.gene54750	PPI
MS.gene059328	MS.gene54750	PPI
MS.gene33992	MS.gene54750	PPI
MS.gene54750	MS.gene33994	PPI
MS.gene54750	MS.gene006013	PPI
MS.gene006014	MS.gene54750	PPI
MS.gene54750	MS.gene041739	PPI
MS.gene33997	MS.gene54750	PPI
MS.gene54750	MS.gene33992	PPI
MS.gene54750	MS.gene038651	PPI
MS.gene33993	MS.gene54750	PPI
MS.gene54750	MS.gene041741	PPI
MS.gene54750	MS.gene006015	PPI
MS.gene059329	MS.gene54750	PPI
MS.gene54750	MS.gene043625	PPI
MS.gene54750	MS.gene33993	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene54750.t1	MTR_1g095890	91.398	186	12	2	1	182	1	186	6.85e-124	347
MS.gene54750.t1	MTR_1g095900	77.297	185	39	1	1	182	1	185	5.74e-104	296

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene54750.t1	AT2G35810	65.730	178	54	3	4	178	22	195	2.10e-84	247
MS.gene54750.t1	AT2G35810	65.730	178	54	3	4	178	22	195	2.10e-84	247
MS.gene54750.t1	AT2G35820	63.687	179	59	2	4	180	8	182	4.69e-83	244
MS.gene54750.t1	AT2G35820	63.687	179	59	2	4	180	98	272	1.60e-81	243
MS.gene54750.t1	AT2G35830	65.341	176	59	2	4	178	8	182	1.89e-81	239
MS.gene54750.t1	AT2G35830	64.205	176	56	3	4	178	8	177	9.29e-77	228

Find 50 sgRNAs with CRISPR-Local

Find 203 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACGGTTAAGCTTGAGAAATT+TGG	0.260726	1.2:+72610796	None:intergenic
GGTGGTAATGTTTGGTATCT+TGG	0.281153	1.2:-72610953	MS.gene54750:CDS
TCATCGGACGGTGAGGGATT+TGG	0.343558	1.2:-72613362	MS.gene54750:CDS
AATGAAATCAAAGATGATTC+AGG	0.369755	1.2:-72610902	MS.gene54750:CDS
AACCTGAAACCTTGAAAACT+TGG	0.407022	1.2:+72610819	None:intergenic
GGTCCATTGGTGGTAATGTT+TGG	0.421411	1.2:-72610961	MS.gene54750:CDS
GACCTGACCGTACTCTTTGA+AGG	0.444255	1.2:+72613394	None:intergenic
ACTCAGTGCCTTGGGTCCAT+TGG	0.468229	1.2:-72610974	MS.gene54750:CDS
AGGTCAAGCTGAGCATCGTT+TGG	0.468746	1.2:+72613338	None:intergenic
CAGTGCCTTGGGTCCATTGG+TGG	0.474720	1.2:-72610971	MS.gene54750:CDS
CAAGTGTGACTCAGTGCCTT+GGG	0.479051	1.2:-72610982	MS.gene54750:CDS
GCAAGTGTGACTCAGTGCCT+TGG	0.493326	1.2:-72610983	MS.gene54750:CDS
TCATTTGAATCAACAATGGA+TGG	0.494781	1.2:+72610920	None:intergenic
GAAGGCAATTGAAGCAGCTC+CGG	0.496049	1.2:-72613420	MS.gene54750:CDS
TCTATTTAAGTCTGATACAA+TGG	0.496626	1.2:-72610753	MS.gene54750:CDS
ACCTTAGCCAAGGAATTCCC+AGG	0.496730	1.2:-72613319	MS.gene54750:intron
ACCTGGGAATTCCTTGGCTA+AGG	0.513339	1.2:+72613318	None:intergenic
AATGGAGAGTGTGAAGGTGA+AGG	0.517827	1.2:-72613438	MS.gene54750:CDS
ATGAAAACCTGGGAATTCCT+TGG	0.524061	1.2:+72613312	None:intergenic
GTCATTGAGGCTTCATCGGA+CGG	0.541534	1.2:-72613374	MS.gene54750:CDS
AACCGTGGGACATGGCATGC+TGG	0.544561	1.2:-72610779	MS.gene54750:CDS
ATACCAAACATTACCACCAA+TGG	0.547916	1.2:+72610958	None:intergenic
GAAAACTTGGACATCCTCAA+TGG	0.552522	1.2:+72610832	None:intergenic
TTATCTACCTCCTACCATTG+AGG	0.558166	1.2:-72610846	MS.gene54750:CDS
TCAGGTCATTGAGGCTTCAT+CGG	0.558495	1.2:-72613378	MS.gene54750:CDS
TCAAGCTTAACCGTGGGACA+TGG	0.558912	1.2:-72610787	MS.gene54750:CDS
GATTTCATTTGAATCAACAA+TGG	0.567401	1.2:+72610916	None:intergenic
CCGTACTCTTTGAAGGTCGC+CGG	0.569217	1.2:+72613401	None:intergenic
GACCTTCAAAGAGTACGGTC+AGG	0.570961	1.2:-72613396	MS.gene54750:CDS
GAGGCTTCATCGGACGGTGA+GGG	0.572018	1.2:-72613368	MS.gene54750:CDS
GTCCTTCTTAAAGTTGTGTG+TGG	0.574527	1.2:+72610519	None:intergenic
TACCACACACAACTTTAAGA+AGG	0.575142	1.2:-72610521	MS.gene54750:CDS
CCGGCGACCTTCAAAGAGTA+CGG	0.593053	1.2:-72613401	MS.gene54750:CDS
CACAACTTTAAGAAGGACAA+TGG	0.594981	1.2:-72610514	MS.gene54750:CDS
GAAGGGAATGGAGAGTGTGA+AGG	0.597978	1.2:-72613444	None:intergenic
CAAAGATGATTCAGGCAAGA+CGG	0.600075	1.2:-72610894	MS.gene54750:CDS
TGAGGCTTCATCGGACGGTG+AGG	0.602563	1.2:-72613369	MS.gene54750:CDS
GACCAGCATGCCATGTCCCA+CGG	0.605299	1.2:+72610777	None:intergenic
GTGATATTAGAAAACTCAAG+TGG	0.611037	1.2:+72611013	None:intergenic
CTTTAAGAAGGACAATGGAG+TGG	0.614786	1.2:-72610509	MS.gene54750:CDS
AAATTTCTCAAGCTTAACCG+TGG	0.618191	1.2:-72610794	MS.gene54750:CDS
ACTTGGACATCCTCAATGGT+AGG	0.620998	1.2:+72610836	None:intergenic
CATTACCACCAATGGACCCA+AGG	0.621913	1.2:+72610966	None:intergenic
ATTGTATCAGACTTAAATAG+AGG	0.622516	1.2:+72610755	None:intergenic
TAATGTTTGGTATCTTGGAG+CGG	0.623808	1.2:-72610948	MS.gene54750:CDS
GCTCAGCTTGACCTTAGCCA+AGG	0.638940	1.2:-72613329	MS.gene54750:CDS
AATTTCTCAAGCTTAACCGT+GGG	0.640376	1.2:-72610793	MS.gene54750:CDS
TGGACATCCTCAATGGTAGG+AGG	0.650915	1.2:+72610839	None:intergenic
AGAGTACGGTCAGGTCATTG+AGG	0.671075	1.2:-72613387	MS.gene54750:CDS
ACGGTCGTGAAGTCGCACAG+TGG	0.761158	1.2:-72610875	MS.gene54750:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAAAATTTATATTTTTTATT+GGG	-	chr1.2:72611724-72611743	MS.gene54750:intron	0.0%
!!!	TAAAAATTTATATTTTTTAT+TGG	-	chr1.2:72611723-72611742	MS.gene54750:intron	0.0%
!!	GTATATTTCTTAAAAAAAAA+TGG	-	chr1.2:72611495-72611514	MS.gene54750:intron	10.0%
!!	TTAATTAAATTCAAAATGAA+TGG	+	chr1.2:72610704-72610723	None:intergenic	10.0%
!!!	AAAGTTATTTTGATTAAAAA+AGG	+	chr1.2:72610866-72610885	None:intergenic	10.0%
!!!	AAGTTATTTTGATTAAAAAA+GGG	+	chr1.2:72610865-72610884	None:intergenic	10.0%
!!	AAAAACAAATAACATATGTA+TGG	-	chr1.2:72611277-72611296	MS.gene54750:intron	15.0%
!!	AAATTAATTCCAATAAGTTA+GGG	+	chr1.2:72612854-72612873	None:intergenic	15.0%
!!	TAACTTAAGATATTTCATAA+AGG	-	chr1.2:72612420-72612439	MS.gene54750:intron	15.0%
!!!	ATACATATGTTATTTGTTTT+TGG	+	chr1.2:72611278-72611297	None:intergenic	15.0%
!!!	TATTTGAAAAGAAATTTTGT+TGG	+	chr1.2:72610729-72610748	None:intergenic	15.0%
!!!	TATTTTTTTGGTCTTTTTTA+GGG	-	chr1.2:72613323-72613342	MS.gene54750:CDS	15.0%
!!!	TTATTTTTTTGGTCTTTTTT+AGG	-	chr1.2:72613322-72613341	MS.gene54750:CDS	15.0%
!!!	TTTTACTCTTTTTTTTTTAG+AGG	-	chr1.2:72611551-72611570	MS.gene54750:intron	15.0%
!!	ATATAACAAATGTGTTTGAT+TGG	+	chr1.2:72611423-72611442	None:intergenic	20.0%
!!	ATATACCTAGTTATTTATCT+CGG	+	chr1.2:72612134-72612153	None:intergenic	20.0%
!!	CAAATTAATTCCAATAAGTT+AGG	+	chr1.2:72612855-72612874	None:intergenic	20.0%
!!	TAAATTAAATGACAGCTTTA+TGG	+	chr1.2:72610773-72610792	None:intergenic	20.0%
!!	TGAAATATCTTAAGTTATGT+TGG	+	chr1.2:72612417-72612436	None:intergenic	20.0%
!!!	CAAAATTTTCATTTGAATTG+AGG	+	chr1.2:72610659-72610678	None:intergenic	20.0%
!!!	CTCAATTCAAATGAAAATTT+TGG	-	chr1.2:72610657-72610676	MS.gene54750:intron	20.0%
!!!	TGTTATAGACTTTTTTTTGA+AGG	-	chr1.2:72611349-72611368	MS.gene54750:intron	20.0%
!!!	TTGTGCTTATCTTATTTTTT+TGG	-	chr1.2:72613311-72613330	MS.gene54750:intron	20.0%
!!!	TTTATTGTTTTATCTGATCT+TGG	-	chr1.2:72612653-72612672	MS.gene54750:intron	20.0%
!	AATGAAATCAAAGATGATTC+AGG	-	chr1.2:72613024-72613043	MS.gene54750:intron	25.0%
!	ACATGCATAATTATATGCAT+GGG	+	chr1.2:72611918-72611937	None:intergenic	25.0%
!	ATAGTAATTGCAATCAACTT+TGG	-	chr1.2:72612607-72612626	MS.gene54750:intron	25.0%
!	ATCAGCTTAATTAATTTAGC+TGG	-	chr1.2:72612762-72612781	MS.gene54750:intron	25.0%
!	ATCTAATTAGTATGCATCAA+TGG	+	chr1.2:72612110-72612129	None:intergenic	25.0%
!	ATCTTCACAAATAAGTTAGA+TGG	-	chr1.2:72611471-72611490	MS.gene54750:intron	25.0%
!	ATGCTCTTTACAATAATACA+TGG	-	chr1.2:72613285-72613304	MS.gene54750:intron	25.0%
!	ATGTATGGAATTCATGTTAT+AGG	-	chr1.2:72611292-72611311	MS.gene54750:intron	25.0%
!	ATGTTGTTGTGATTTATGTA+TGG	-	chr1.2:72613354-72613373	MS.gene54750:CDS	25.0%
!	ATTACATTAAACACTGTCAT+TGG	+	chr1.2:72612391-72612410	None:intergenic	25.0%
!	ATTGCAATTACTATTGATAG+TGG	+	chr1.2:72612601-72612620	None:intergenic	25.0%
!	ATTGTATCAGACTTAAATAG+AGG	+	chr1.2:72613174-72613193	None:intergenic	25.0%
!	ATTTAAGTGATTCTTTGTCA+AGG	-	chr1.2:72610788-72610807	MS.gene54750:CDS	25.0%
!	CATAATGTCAATCTAAATTG+AGG	+	chr1.2:72612803-72612822	None:intergenic	25.0%
!	GATTTCATTTGAATCAACAA+TGG	+	chr1.2:72613013-72613032	None:intergenic	25.0%
!	TCAGCTTAATTAATTTAGCT+GGG	-	chr1.2:72612763-72612782	MS.gene54750:intron	25.0%
!	TCTAATTAGTATGCATCAAT+GGG	+	chr1.2:72612109-72612128	None:intergenic	25.0%
!	TCTATTTAAGTCTGATACAA+TGG	-	chr1.2:72613173-72613192	MS.gene54750:intron	25.0%
!	TGCTCTTTACAATAATACAT+GGG	-	chr1.2:72613286-72613305	MS.gene54750:intron	25.0%
!	TGTATGGAATTCATGTTATA+GGG	-	chr1.2:72611293-72611312	MS.gene54750:intron	25.0%
!!	ATGATTTTGTATTATGCCTT+TGG	+	chr1.2:72612527-72612546	None:intergenic	25.0%
!!!	GGAATTAATTTGTGTTTGTT+AGG	-	chr1.2:72612863-72612882	MS.gene54750:intron	25.0%
!!!	TATGGTTTTTTATTGTGTTC+AGG	-	chr1.2:72613372-72613391	MS.gene54750:CDS	25.0%
!!!	TCAGTTTTTTATCTGCTATA+TGG	-	chr1.2:72610826-72610845	MS.gene54750:CDS	25.0%
!!!	TTTTTCAAGGTGAATAAGTT+GGG	-	chr1.2:72611871-72611890	MS.gene54750:intron	25.0%
	AGATACCGAGATAAATAACT+AGG	-	chr1.2:72612126-72612145	MS.gene54750:intron	30.0%
	ATTCCAATAAGTTAGGGTAT+AGG	+	chr1.2:72612848-72612867	None:intergenic	30.0%
	CAACTTATTCACCTTGAAAA+AGG	+	chr1.2:72611872-72611891	None:intergenic	30.0%
	CATAATTATATGCATGGGTT+GGG	+	chr1.2:72611913-72611932	None:intergenic	30.0%
	CATGTAACACTTTAGTGAAA+GGG	+	chr1.2:72613247-72613266	None:intergenic	30.0%
	GACATGCATAATTATATGCA+TGG	+	chr1.2:72611919-72611938	None:intergenic	30.0%
	GATGCAAAATATTGATCCAA+AGG	-	chr1.2:72612508-72612527	MS.gene54750:intron	30.0%
	GTGATATTAGAAAACTCAAG+TGG	+	chr1.2:72612916-72612935	None:intergenic	30.0%
	GTTGTTTAAATTCACAGAGA+TGG	-	chr1.2:72612629-72612648	MS.gene54750:intron	30.0%
	TCATTTGAATCAACAATGGA+TGG	+	chr1.2:72613009-72613028	None:intergenic	30.0%
!	ACATGTTCTTGTTATGCATA+TGG	+	chr1.2:72610902-72610921	None:intergenic	30.0%
!	ATAATTATATGCATGGGTTG+GGG	+	chr1.2:72611912-72611931	None:intergenic	30.0%
!!!	CTTTTTCAAGGTGAATAAGT+TGG	-	chr1.2:72611870-72611889	MS.gene54750:intron	30.0%
	AAATTTCTCAAGCTTAACCG+TGG	-	chr1.2:72613132-72613151	MS.gene54750:intron	35.0%
	AACCTGAAACCTTGAAAACT+TGG	+	chr1.2:72613110-72613129	None:intergenic	35.0%
	AAGTGTAAAGCTTGAATCTG+TGG	-	chr1.2:72612561-72612580	MS.gene54750:intron	35.0%
	AATGCAAGTTACAGAAATCC+AGG	+	chr1.2:72611045-72611064	None:intergenic	35.0%
	AATTTCTCAAGCTTAACCGT+GGG	-	chr1.2:72613133-72613152	MS.gene54750:intron	35.0%
	ACGGTTAAGCTTGAGAAATT+TGG	+	chr1.2:72613133-72613152	None:intergenic	35.0%
	AGAAGTGAAGAATGAAAACC+TGG	+	chr1.2:72610628-72610647	None:intergenic	35.0%
	AGGTGCAAAACAAAAATACC+AGG	+	chr1.2:72611098-72611117	None:intergenic	35.0%
	ATAAAAAACTGAGTGCTTCC+AGG	+	chr1.2:72610818-72610837	None:intergenic	35.0%
	ATACCAAACATTACCACCAA+TGG	+	chr1.2:72612971-72612990	None:intergenic	35.0%
	ATGCAAGTTACAGAAATCCA+GGG	+	chr1.2:72611044-72611063	None:intergenic	35.0%
	CAACCTATACCCTAACTTAT+TGG	-	chr1.2:72612842-72612861	MS.gene54750:intron	35.0%
	CAATAAGTTAGGGTATAGGT+TGG	+	chr1.2:72612844-72612863	None:intergenic	35.0%
	GAAGTGAAGAATGAAAACCT+GGG	+	chr1.2:72610627-72610646	None:intergenic	35.0%
	GCATAATTATATGCATGGGT+TGG	+	chr1.2:72611914-72611933	None:intergenic	35.0%
	GCATGTAACACTTTAGTGAA+AGG	+	chr1.2:72613248-72613267	None:intergenic	35.0%
	TAACACTTTAGTGAAAGGGA+GGG	+	chr1.2:72613243-72613262	None:intergenic	35.0%
	TAATGTTTGGTATCTTGGAG+CGG	-	chr1.2:72612978-72612997	MS.gene54750:intron	35.0%
	TCTTGTCGCATCATTTAATG+TGG	+	chr1.2:72612049-72612068	None:intergenic	35.0%
!	CACAACTTTAAGAAGGACAA+TGG	-	chr1.2:72613412-72613431	MS.gene54750:CDS	35.0%
!	GGATTAATCGATTCTTGGAT+TGG	-	chr1.2:72612336-72612355	MS.gene54750:intron	35.0%
!	TACCACACACAACTTTAAGA+AGG	-	chr1.2:72613405-72613424	MS.gene54750:CDS	35.0%
!	TCTTGTTATGCATATGGCAT+TGG	+	chr1.2:72610896-72610915	None:intergenic	35.0%
!	TTTTTATTGTGTTCAGGTGG+TGG	-	chr1.2:72613378-72613397	MS.gene54750:CDS	35.0%
!!	AGAGCATTGCAAATGAATTC+AGG	+	chr1.2:72613272-72613291	None:intergenic	35.0%
!!	GCTAGAATTCACCTTTTTCA+AGG	-	chr1.2:72611858-72611877	MS.gene54750:intron	35.0%
!!!	GGTTTTTTATTGTGTTCAGG+TGG	-	chr1.2:72613375-72613394	MS.gene54750:CDS	35.0%
!!!	TGGTCTTTTTTAGGGTTTAG+TGG	-	chr1.2:72613331-72613350	MS.gene54750:CDS	35.0%
!!!	TTTTTTGTCAAGTTGCCTAG+TGG	-	chr1.2:72611836-72611855	MS.gene54750:intron	35.0%
	AAAGGTGAATTCTAGCCACT+AGG	+	chr1.2:72611854-72611873	None:intergenic	40.0%
	AATGTGTTTGATTGGTGCAG+TGG	+	chr1.2:72611415-72611434	None:intergenic	40.0%
	ATGAAAACCTGGGAATTCCT+TGG	+	chr1.2:72610617-72610636	None:intergenic	40.0%
	CAAAGATGATTCAGGCAAGA+CGG	-	chr1.2:72613032-72613051	MS.gene54750:intron	40.0%
	CCAAGAATCGATTAATCCGA+GGG	+	chr1.2:72612334-72612353	None:intergenic	40.0%
	GAAAACTTGGACATCCTCAA+TGG	+	chr1.2:72613097-72613116	None:intergenic	40.0%
	GAATTCATGTTATAGGGCTG+CGG	-	chr1.2:72611299-72611318	MS.gene54750:intron	40.0%
	GTAACACTTTAGTGAAAGGG+AGG	+	chr1.2:72613244-72613263	None:intergenic	40.0%
	GTCCTTCTTAAAGTTGTGTG+TGG	+	chr1.2:72613410-72613429	None:intergenic	40.0%
	GTCGTAATTTCTCGCTGTTT+CGG	-	chr1.2:72612678-72612697	MS.gene54750:intron	40.0%
	TCCAAGAATCGATTAATCCG+AGG	+	chr1.2:72612335-72612354	None:intergenic	40.0%
	TGGAGATCAGTGAGACTATT+TGG	+	chr1.2:72610684-72610703	None:intergenic	40.0%
	TTATCTACCTCCTACCATTG+AGG	-	chr1.2:72613080-72613099	MS.gene54750:intron	40.0%
	TTCTTTGACCAAACCCATCT+CGG	-	chr1.2:72610943-72610962	MS.gene54750:CDS	40.0%
!	AATGACAGCTTTATGGCGAT+AGG	+	chr1.2:72610766-72610785	None:intergenic	40.0%
!	ATGACAGCTTTATGGCGATA+GGG	+	chr1.2:72610765-72610784	None:intergenic	40.0%
!	CTTTAAGAAGGACAATGGAG+TGG	-	chr1.2:72613417-72613436	MS.gene54750:CDS	40.0%
!	GGTGGTAATGTTTGGTATCT+TGG	-	chr1.2:72612973-72612992	MS.gene54750:intron	40.0%
!	TCACACAGCTCTGTATTGAT+TGG	-	chr1.2:72611132-72611151	MS.gene54750:intron	40.0%
!	TGAGGATGTCCAAGTTTTCA+AGG	-	chr1.2:72613098-72613117	MS.gene54750:intron	40.0%
!!	GTCCAAGTTTTCAAGGTTTC+AGG	-	chr1.2:72613105-72613124	MS.gene54750:intron	40.0%
	ACCAACTGAGCTATGCTCAT+GGG	-	chr1.2:72611942-72611961	MS.gene54750:intron	45.0%
	ACTTGGACATCCTCAATGGT+AGG	+	chr1.2:72613093-72613112	None:intergenic	45.0%
	ATGAGCATAGCTCAGTTGGT+AGG	+	chr1.2:72611942-72611961	None:intergenic	45.0%
	CCACTAAAATTGCCACCAAG+GGG	+	chr1.2:72612259-72612278	None:intergenic	45.0%
	CCCACTAAAATTGCCACCAA+GGG	+	chr1.2:72612260-72612279	None:intergenic	45.0%
	CTAAGTCCACACAGAGCAAT+GGG	-	chr1.2:72612280-72612299	MS.gene54750:intron	45.0%
	GTGTGAATTAGTCAGACAGC+AGG	+	chr1.2:72611118-72611137	None:intergenic	45.0%
	TAAGTCCACACAGAGCAATG+GGG	-	chr1.2:72612281-72612300	MS.gene54750:intron	45.0%
	TACCAACTGAGCTATGCTCA+TGG	-	chr1.2:72611941-72611960	MS.gene54750:intron	45.0%
	TCAGGTCATTGAGGCTTCAT+CGG	-	chr1.2:72610548-72610567	MS.gene54750:intron	45.0%
	TCTTTGACCAAACCCATCTC+GGG	-	chr1.2:72610944-72610963	MS.gene54750:CDS	45.0%
!	AGGTGAATAAGTTGGGTGTC+TGG	-	chr1.2:72611878-72611897	MS.gene54750:intron	45.0%
!	ATTCTTTGTCAAGGTGCTCC+TGG	-	chr1.2:72610797-72610816	MS.gene54750:CDS	45.0%
!	CCCTCGGATTAATCGATTCT+TGG	-	chr1.2:72612331-72612350	MS.gene54750:intron	45.0%
!	GGTCCATTGGTGGTAATGTT+TGG	-	chr1.2:72612965-72612984	MS.gene54750:intron	45.0%
!	GGTGAATAAGTTGGGTGTCT+GGG	-	chr1.2:72611879-72611898	MS.gene54750:intron	45.0%
!	GTGAATAAGTTGGGTGTCTG+GGG	-	chr1.2:72611880-72611899	MS.gene54750:intron	45.0%
!	TGAGCATAGCTCAGTTGGTA+GGG	+	chr1.2:72611941-72611960	None:intergenic	45.0%
!	TTCATTGCTACTTGCACACC+TGG	-	chr1.2:72611077-72611096	MS.gene54750:intron	45.0%
!!	CAGCTCTGTATTGATTGGTG+CGG	-	chr1.2:72611137-72611156	MS.gene54750:intron	45.0%
!!	CCCTTGGTGGCAATTTTAGT+GGG	-	chr1.2:72612257-72612276	MS.gene54750:intron	45.0%
!!	TATTTATTTATTTAGTTATT+TGG	-	chr1.2:72611227-72611246	MS.gene54750:intron	5.0%
	AAATTTGCACCCCCTGATCC+AGG	-	chr1.2:72612185-72612204	MS.gene54750:intron	50.0%
	AATTTGCACCCCCTGATCCA+GGG	-	chr1.2:72612186-72612205	MS.gene54750:intron	50.0%
	ACCTGGGAATTCCTTGGCTA+AGG	+	chr1.2:72610611-72610630	None:intergenic	50.0%
	ACCTTAGCCAAGGAATTCCC+AGG	-	chr1.2:72610607-72610626	MS.gene54750:intron	50.0%
	AGAGTACGGTCAGGTCATTG+AGG	-	chr1.2:72610539-72610558	MS.gene54750:intron	50.0%
	ATCGAACCTGAGACCTTGAG+AGG	+	chr1.2:72612230-72612249	None:intergenic	50.0%
	CAAGTGTGACTCAGTGCCTT+GGG	-	chr1.2:72612944-72612963	MS.gene54750:intron	50.0%
	CATTACCACCAATGGACCCA+AGG	+	chr1.2:72612963-72612982	None:intergenic	50.0%
	CCAACTGAGCTATGCTCATG+GGG	-	chr1.2:72611943-72611962	MS.gene54750:intron	50.0%
	GAAGGCAATTGAAGCAGCTC+CGG	-	chr1.2:72610506-72610525	MS.gene54750:CDS	50.0%
	GACCTGACCGTACTCTTTGA+AGG	+	chr1.2:72610535-72610554	None:intergenic	50.0%
	GCCCACTAAAATTGCCACCA+AGG	+	chr1.2:72612261-72612280	None:intergenic	50.0%
	GCTAAGTCCACACAGAGCAA+TGG	-	chr1.2:72612279-72612298	MS.gene54750:intron	50.0%
	GTCATTGAGGCTTCATCGGA+CGG	-	chr1.2:72610552-72610571	MS.gene54750:intron	50.0%
	TCAAGCTTAACCGTGGGACA+TGG	-	chr1.2:72613139-72613158	MS.gene54750:intron	50.0%
	TGGACATCCTCAATGGTAGG+AGG	+	chr1.2:72613090-72613109	None:intergenic	50.0%
!	AGGTCAAGCTGAGCATCGTT+TGG	+	chr1.2:72610591-72610610	None:intergenic	50.0%
!	AGGTTCGATTCGATTCCCCT+TGG	-	chr1.2:72612241-72612260	MS.gene54750:intron	50.0%
!	ATCTGAAGCCAACCCGAGAT+GGG	+	chr1.2:72610959-72610978	None:intergenic	50.0%
!	GACCTTCAAAGAGTACGGTC+AGG	-	chr1.2:72610530-72610549	MS.gene54750:CDS	50.0%
!	TTCGATTCGATTCCCCTTGG+TGG	-	chr1.2:72612244-72612263	MS.gene54750:intron	50.0%
!!	CCCCTTGGTGGCAATTTTAG+TGG	-	chr1.2:72612256-72612275	MS.gene54750:intron	50.0%
!!	GGTATAGGTTGGTGACTTGC+AGG	+	chr1.2:72612833-72612852	None:intergenic	50.0%
	ACTCAGTGCCTTGGGTCCAT+TGG	-	chr1.2:72612952-72612971	MS.gene54750:intron	55.0%
	AGACCTTGAGAGGACAGTGG+CGG	+	chr1.2:72612220-72612239	None:intergenic	55.0%
	ATCCAAGACCCTGGATCAGG+GGG	+	chr1.2:72612197-72612216	None:intergenic	55.0%
	CACTGTCCTCTCAAGGTCTC+AGG	-	chr1.2:72612221-72612240	MS.gene54750:intron	55.0%
	CCCCATGAGCATAGCTCAGT+TGG	+	chr1.2:72611946-72611965	None:intergenic	55.0%
	CCGGCGACCTTCAAAGAGTA+CGG	-	chr1.2:72610525-72610544	MS.gene54750:CDS	55.0%
	CTGAGACCTTGAGAGGACAG+TGG	+	chr1.2:72612223-72612242	None:intergenic	55.0%
	GATCCAAGACCCTGGATCAG+GGG	+	chr1.2:72612198-72612217	None:intergenic	55.0%
	GCAAGTGTGACTCAGTGCCT+TGG	-	chr1.2:72612943-72612962	MS.gene54750:intron	55.0%
	GCTCAGCTTGACCTTAGCCA+AGG	-	chr1.2:72610597-72610616	MS.gene54750:intron	55.0%
	GGATCCAAGACCCTGGATCA+GGG	+	chr1.2:72612199-72612218	None:intergenic	55.0%
	TCATCGGACGGTGAGGGATT+TGG	-	chr1.2:72610564-72610583	MS.gene54750:intron	55.0%
	TGACCAAACCCATCTCGGGT+TGG	-	chr1.2:72610948-72610967	MS.gene54750:CDS	55.0%
	TGGAGTGTGCTCCTCTCACA+GGG	-	chr1.2:72610981-72611000	MS.gene54750:CDS	55.0%
	TTGGAGTGTGCTCCTCTCAC+AGG	-	chr1.2:72610980-72610999	MS.gene54750:CDS	55.0%
!	AAGCCAACCCGAGATGGGTT+TGG	+	chr1.2:72610954-72610973	None:intergenic	55.0%
!	CCGTACTCTTTGAAGGTCGC+CGG	+	chr1.2:72610528-72610547	None:intergenic	55.0%
!	GATCTGAAGCCAACCCGAGA+TGG	+	chr1.2:72610960-72610979	None:intergenic	55.0%
!!	CTCGGGTTGGCTTCAGATCT+TGG	-	chr1.2:72610961-72610980	MS.gene54750:CDS	55.0%
!!	GCGGAGCTAGGTAGCTTTGA+GGG	-	chr1.2:72611004-72611023	MS.gene54750:CDS	55.0%
	AACCGTGGGACATGGCATGC+TGG	-	chr1.2:72613147-72613166	MS.gene54750:intron	60.0%
	AATTCCACCGCCCACTTGCG+GGG	+	chr1.2:72612307-72612326	None:intergenic	60.0%
	ACGGTCGTGAAGTCGCACAG+TGG	-	chr1.2:72613051-72613070	MS.gene54750:intron	60.0%
	CAATTCCACCGCCCACTTGC+GGG	+	chr1.2:72612308-72612327	None:intergenic	60.0%
	CAGTGCCTTGGGTCCATTGG+TGG	-	chr1.2:72612955-72612974	MS.gene54750:intron	60.0%
	CCAATTCCACCGCCCACTTG+CGG	+	chr1.2:72612309-72612328	None:intergenic	60.0%
	CGGATCCAAGACCCTGGATC+AGG	+	chr1.2:72612200-72612219	None:intergenic	60.0%
	GACCAGCATGCCATGTCCCA+CGG	+	chr1.2:72613152-72613171	None:intergenic	60.0%
	GAGGCTTCATCGGACGGTGA+GGG	-	chr1.2:72610558-72610577	MS.gene54750:intron	60.0%
	GATCCGCCACTGTCCTCTCA+AGG	-	chr1.2:72612214-72612233	MS.gene54750:intron	60.0%
	GGAGTGTGCTCCTCTCACAG+GGG	-	chr1.2:72610982-72611001	MS.gene54750:CDS	60.0%
	TGAGGCTTCATCGGACGGTG+AGG	-	chr1.2:72610557-72610576	MS.gene54750:intron	60.0%
!	GGCGGAGCTAGGTAGCTTTG+AGG	-	chr1.2:72611003-72611022	MS.gene54750:CDS	60.0%
!	GGCGGTGGAATTGGTTCCCT+CGG	-	chr1.2:72612315-72612334	MS.gene54750:intron	60.0%
	AGCAATGGGGCCCCGCAAGT+GGG	-	chr1.2:72612294-72612313	MS.gene54750:intron	65.0%
	CACCCCCTGATCCAGGGTCT+TGG	-	chr1.2:72612192-72612211	MS.gene54750:intron	65.0%
	CCGCAAGTGGGCGGTGGAAT+TGG	-	chr1.2:72612306-72612325	MS.gene54750:intron	65.0%
	GTGTGCTCCTCTCACAGGGG+CGG	-	chr1.2:72610985-72611004	MS.gene54750:CDS	65.0%
!!	CAGTGGCGGATCCAAGACCC+TGG	+	chr1.2:72612206-72612225	None:intergenic	65.0%
	AATGGGGCCCCGCAAGTGGG+CGG	-	chr1.2:72612297-72612316	MS.gene54750:intron	70.0%
	CCTAGCTCCGCCCCTGTGAG+AGG	+	chr1.2:72610995-72611014	None:intergenic	70.0%
	CCTCTCACAGGGGCGGAGCT+AGG	-	chr1.2:72610992-72611011	MS.gene54750:CDS	70.0%
	CGGGGCCCCATTGCTCTGTG+TGG	+	chr1.2:72612289-72612308	None:intergenic	70.0%
	GAGCAATGGGGCCCCGCAAG+TGG	-	chr1.2:72612293-72612312	MS.gene54750:intron	70.0%
	GGGTGTGCACGTGCACACCC+TGG	-	chr1.2:72611024-72611043	MS.gene54750:CDS	70.0%
!	GGGGCCCCGCAAGTGGGCGG+TGG	-	chr1.2:72612300-72612319	MS.gene54750:intron	85.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	72610489	72613459	72610489	ID=MS.gene54750
chr1.2	mRNA	72610489	72613459	72610489	ID=MS.gene54750.t1;Parent=MS.gene54750
chr1.2	exon	72613320	72613459	72613320	ID=MS.gene54750.t1.exon1;Parent=MS.gene54750.t1
chr1.2	CDS	72613320	72613459	72613320	ID=cds.MS.gene54750.t1;Parent=MS.gene54750.t1
chr1.2	exon	72610721	72611063	72610721	ID=MS.gene54750.t1.exon2;Parent=MS.gene54750.t1
chr1.2	CDS	72610721	72611063	72610721	ID=cds.MS.gene54750.t1;Parent=MS.gene54750.t1
chr1.2	exon	72610489	72610554	72610489	ID=MS.gene54750.t1.exon3;Parent=MS.gene54750.t1
chr1.2	CDS	72610489	72610554	72610489	ID=cds.MS.gene54750.t1;Parent=MS.gene54750.t1

Gene Sequence

>MS.gene54750

ATGGAGAGTGTGAAGGTGAAGGCAATTGAAGCAGCTCCGGCGACCTTCAAAGAGTACGGTCAGGTCATTGAGGCTTCATCGGACGGTGAGGGATTTGGTCCAAACGATGCTCAGCTTGACCTTAGCCAAGGAATTCCCAGGTTTTCATTCTTCACTTCTTGTTAATTCCTCAATTCAAATGAAAATTTTGGTCCAAATAGTCTCACTGATCTCCATTCATTTTGAATTTAATTAATACCAACAAAATTTCTTTTCAAATATTTTTAGAATAGTCCCTATCGCCATAAAGCTGTCATTTAATTTAAGTGATTCTTTGTCAAGGTGCTCCTGGAAGCACTCAGTTTTTTATCTGCTATATGGTTCAGTAGTTGCTCCCTTTTTTAATCAAAATAACTTTAAAAAGTCCAATGCCATATGCATAACAAGAACATGTAGCGAAACACGATTCAAACTATTCTTTGACCAAACCCATCTCGGGTTGGCTTCAGATCTTGGAGTGTGCTCCTCTCACAGGGGCGGAGCTAGGTAGCTTTGAGGGTGTGCACGTGCACACCCTGGATTTCTGTAACTTGCATTAGTTTTTCTACTTTCATTGCTACTTGCACACCTGGTATTTTTGTTTTGCACCTGCTGTCTGACTAATTCACACAGCTCTGTATTGATTGGTGCGGTGCATGCATACTGACGCAGCTCTACAAATGTTTTGACTTTCAAAGTGTTACTATTATTTTATTTATTTATTTATTTATTTAGTTATTTGGAAGATTTTTATCAATTAAGTAAAAGCCAAAAACAAATAACATATGTATGGAATTCATGTTATAGGGCTGCGGACTGCATCTACAATTATCATACATTCATGTTATAGACTTTTTTTTGAAGGACATTCATGTTATAGACTTACTGCATTTATAATTAATTATCCACTGCACCAATCAAACACATTTGTTATATCTTCGCAAATAATTTTTTTTTTTAGAAAATCTTCACAAATAAGTTAGATGGTGTATATTTCTTAAAAAAAAATGGTTAGATGATGTATATTATTCAAAACAAAAATCTTTTTACTCTTTTTTTTTTAGAGGAATCATTTCACTCTCTATTCTTTAGTTCTACTTTTTATTCTTTTTCTTATAATAAAAGATATTACTCTTTTGAATTCATAGCAGTAAATAGTTGAATTTACAATTTGTCAAAAGTAATAAAATTTAATATGATTATTTACTAAAAAGAATAAAAATTTATATTTTTTATTGGGTAAAAGTAACACAAATGTAAATTTAGTAGTTTAATTTAATATGAAAAAGAGTTTAATTTATATGCACTGACTCTAAAGTTTTTTTTTTTTTTTTTGTCAAGTTGCCTAGTGGCTAGAATTCACCTTTTTCAAGGTGAATAAGTTGGGTGTCTGGGGTTCGAACCCCAACCCATGCATATAATTATGCATGTCCCTACCAACTGAGCTATGCTCATGGGGACGACTTTAAAGTTATTTTACACATGCATTCAATGATGTATTTTTATATCAATTAATAAATATACAATATATGTTTTCGACCACATTAAATGATGCGACAAGACATTATTAAACGCATGTGTGAAATAAGTTTACAATGTCCCATTGATGCATACTAATTAGATACCGAGATAAATAACTAGGTATATATATTAAAATTTATAACATTAATAAGTTAAAAAATTTGCACCCCCTGATCCAGGGTCTTGGATCCGCCACTGTCCTCTCAAGGTCTCAGGTTCGATTCGATTCCCCTTGGTGGCAATTTTAGTGGGCTAAGTCCACACAGAGCAATGGGGCCCCGCAAGTGGGCGGTGGAATTGGTTCCCTCGGATTAATCGATTCTTGGATTGGATGCTGAGTTTTAAAAAAAAAATCTTTGACCAATGACAGTGTTTAATGTAATTAACCAACATAACTTAAGATATTTCATAAAGGCTTCAATGAAGATTTGTGAAAATACAGCTTATATTATCTATGTAGTCACTAATCACAATATTACTGATGCAAAATATTGATCCAAAGGCATAATACAAAATCATCGTAAATTATTGTAAAGTGTAAAGCTTGAATCTGTGGTCAAATTTACAATGCCACTATCAATAGTAATTGCAATCAACTTTGGTTGTTTAAATTCACAGAGATGGATTTATTGTTTTATCTGATCTTGGTTGTCGTAATTTCTCGCTGTTTCGGCTGTATAACTGTATTTATCTTGACATAAAGTGCTCAAAATCTGTTTCACTATACATGTTACATCAGCTTAATTAATTTAGCTGGGATAGTTATTAGCTTCCTCAATTTAGATTGACATTATGCTGCAAGCCTGCAAGTCACCAACCTATACCCTAACTTATTGGAATTAATTTGTGTTTGTTAGGTTCTACATTATGCATCTTGAAAATCGTCCACTTGAGTTTTCTAATATCACACATCATGCAAGTGTGACTCAGTGCCTTGGGTCCATTGGTGGTAATGTTTGGTATCTTGGAGCGGCTAAGCCATCCATTGTTGATTCAAATGAAATCAAAGATGATTCAGGCAAGACGGTCGTGAAGTCGCACAGTGGTCATTATTATCTACCTCCTACCATTGAGGATGTCCAAGTTTTCAAGGTTTCAGGTTCCAAATTTCTCAAGCTTAACCGTGGGACATGGCATGCTGGTCCTCTATTTAAGTCTGATACAATGGACTTTTACAATCTAGAACTGAGCAATACAAATGTAAGATTTTCACCCTCCCTTTCACTAAAGTGTTACATGCACCTGAATTCATTTGCAATGCTCTTTACAATAATACATGGGAATTGTGCTTATCTTATTTTTTTGGTCTTTTTTAGGGTTTAGTGGATGTTGTTGTGATTTATGTATGGTTTTTTATTGTGTTCAGGTGGTGGATCATACCACACACAACTTTAAGAAGGACAATGGAGTGGTTTTTTCGATTGTTGAGTAA

Protein sequence

>MS.gene54750.t1

MESVKVKAIEAAPATFKEYGQVIEASSDGEGFGPNDAQLDLSQGIPRFYIMHLENRPLEFSNITHHASVTQCLGSIGGNVWYLGAAKPSIVDSNEIKDDSGKTVVKSHSGHYYLPPTIEDVQVFKVSGSKFLKLNRGTWHAGPLFKSDTMDFYNLELSNTNVVDHTTHNFKKDNGVVFSIVE