Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012270.t1 | RHN64625.1 | 96.2 | 266 | 10 | 0 | 1 | 266 | 84 | 349 | 3.80E-144 | 520.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012270.t1 | A0A072US78 | 96.2 | 266 | 10 | 0 | 1 | 266 | 57 | 322 | 2.7e-144 | 520.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene84671 | MS.gene012270 | PPI |
| MS.gene026086 | MS.gene012270 | PPI |
| MS.gene57569 | MS.gene012270 | PPI |
| MS.gene012270 | MS.gene026084 | PPI |
| MS.gene012270 | MS.gene85625 | PPI |
| MS.gene012270 | MS.gene026085 | PPI |
| MS.gene012270 | MS.gene85627 | PPI |
| MS.gene012270 | MS.gene025116 | PPI |
| MS.gene012270 | MS.gene025114 | PPI |
| MS.gene025118 | MS.gene012270 | PPI |
| MS.gene025114 | MS.gene012270 | PPI |
| MS.gene84672 | MS.gene012270 | PPI |
| MS.gene051858 | MS.gene012270 | PPI |
| MS.gene012270 | MS.gene059902 | PPI |
| MS.gene012270 | MS.gene83168 | PPI |
| MS.gene012270 | MS.gene026088 | PPI |
| MS.gene012270 | MS.gene025115 | PPI |
| MS.gene025115 | MS.gene012270 | PPI |
| MS.gene85626 | MS.gene012270 | PPI |
| MS.gene012270 | MS.gene026083 | PPI |
| MS.gene57567 | MS.gene012270 | PPI |
| MS.gene012270 | MS.gene025118 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012270.t1 | MTR_4g126050 | 96.241 | 266 | 10 | 0 | 1 | 266 | 57 | 322 | 0.0 | 535 |
| MS.gene012270.t1 | MTR_2g039510 | 72.325 | 271 | 70 | 3 | 1 | 266 | 1 | 271 | 3.30e-142 | 400 |
| MS.gene012270.t1 | MTR_2g039570 | 71.206 | 257 | 72 | 2 | 12 | 266 | 7 | 263 | 5.90e-134 | 379 |
| MS.gene012270.t1 | MTR_4g126120 | 65.900 | 261 | 88 | 1 | 1 | 260 | 1 | 261 | 6.23e-133 | 376 |
| MS.gene012270.t1 | MTR_4g126120 | 67.729 | 251 | 80 | 1 | 11 | 260 | 20 | 270 | 1.45e-130 | 371 |
| MS.gene012270.t1 | MTR_2g039480 | 67.045 | 264 | 82 | 3 | 8 | 266 | 4 | 267 | 6.85e-127 | 361 |
| MS.gene012270.t1 | MTR_4g126050 | 93.889 | 180 | 11 | 0 | 1 | 180 | 57 | 236 | 1.42e-123 | 352 |
| MS.gene012270.t1 | MTR_1g016050 | 62.745 | 255 | 92 | 2 | 12 | 265 | 7 | 259 | 9.96e-114 | 328 |
| MS.gene012270.t1 | MTR_2g039450 | 60.300 | 267 | 103 | 3 | 1 | 264 | 1 | 267 | 2.09e-111 | 323 |
| MS.gene012270.t1 | MTR_1g016060 | 44.199 | 181 | 81 | 2 | 87 | 266 | 467 | 628 | 2.17e-34 | 131 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012270.t1 | AT3G47590 | 63.889 | 252 | 90 | 1 | 9 | 260 | 55 | 305 | 1.55e-120 | 347 |
| MS.gene012270.t1 | AT3G47560 | 63.035 | 257 | 94 | 1 | 9 | 265 | 6 | 261 | 3.62e-118 | 339 |
| MS.gene012270.t1 | AT3G47560 | 63.035 | 257 | 94 | 1 | 9 | 265 | 42 | 297 | 1.39e-117 | 339 |
| MS.gene012270.t1 | AT1G29840 | 63.052 | 249 | 91 | 1 | 12 | 260 | 61 | 308 | 1.29e-116 | 337 |
| MS.gene012270.t1 | AT3G47560 | 57.447 | 282 | 95 | 1 | 9 | 265 | 6 | 287 | 6.14e-114 | 329 |
| MS.gene012270.t1 | AT5G11910 | 60.474 | 253 | 99 | 1 | 6 | 257 | 33 | 285 | 2.67e-112 | 326 |
| MS.gene012270.t1 | AT5G11910 | 60.474 | 253 | 99 | 1 | 6 | 257 | 15 | 267 | 3.72e-112 | 325 |
| MS.gene012270.t1 | AT3G47560 | 57.042 | 284 | 94 | 2 | 9 | 265 | 6 | 288 | 9.17e-112 | 324 |
| MS.gene012270.t1 | AT3G47560 | 52.427 | 309 | 95 | 2 | 9 | 265 | 6 | 314 | 9.74e-108 | 315 |
| MS.gene012270.t1 | AT2G19550 | 61.508 | 252 | 89 | 5 | 14 | 260 | 5 | 253 | 8.29e-106 | 310 |
| MS.gene012270.t1 | AT3G47590 | 64.151 | 159 | 57 | 0 | 9 | 167 | 55 | 213 | 2.84e-75 | 229 |
| MS.gene012270.t1 | AT5G11910 | 60.959 | 146 | 57 | 0 | 6 | 151 | 33 | 178 | 1.14e-61 | 192 |
| MS.gene012270.t1 | AT5G11910 | 60.959 | 146 | 57 | 0 | 6 | 151 | 15 | 160 | 1.23e-61 | 192 |
Find 54 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCATGCATATTTGTATTT+AGG | 0.242010 | 8.1:+6022589 | None:intergenic |
| GTGGGTATATTGCAAGATTC+TGG | 0.270892 | 8.1:-6025815 | MS.gene012270:CDS |
| TCGCCAAACGGTTTGATTCT+AGG | 0.277406 | 8.1:+6024121 | None:intergenic |
| AAGAAACCATACACCAAGAT+AGG | 0.333809 | 8.1:-6021697 | MS.gene012270:CDS |
| AGGTTATATGGAAAGAATTA+AGG | 0.342347 | 8.1:-6023293 | MS.gene012270:CDS |
| GCGCCTTGGAAAAGGTTATA+TGG | 0.368501 | 8.1:-6023305 | MS.gene012270:CDS |
| TGTGACTCTGGAAAGTTTGC+TGG | 0.387742 | 8.1:-6022616 | MS.gene012270:CDS |
| CGTTTGGCGACTGCAATTGT+TGG | 0.419231 | 8.1:-6024108 | MS.gene012270:CDS |
| GTGAGTGGTTTGGTAAAATC+TGG | 0.429615 | 8.1:+6021798 | None:intergenic |
| GGTGAACCTTGCTGCTGCAT+TGG | 0.431520 | 8.1:-6025652 | MS.gene012270:CDS |
| AGTGATGGTTCGTTTCAGTA+TGG | 0.432436 | 8.1:-6024192 | MS.gene012270:CDS |
| AGTATCCCTATCTTGGTGTA+TGG | 0.442733 | 8.1:+6021691 | None:intergenic |
| TCAGACACCGTTATATCTGT+TGG | 0.445284 | 8.1:-6021839 | MS.gene012270:CDS |
| TTTCCTAGAATCAAACCGTT+TGG | 0.448265 | 8.1:-6024124 | MS.gene012270:CDS |
| CGTTTCAGTATGGCAACTAC+TGG | 0.448611 | 8.1:-6024182 | MS.gene012270:CDS |
| ATTGCAAGATTCTGGAACTA+AGG | 0.452028 | 8.1:-6025807 | MS.gene012270:CDS |
| AAAGCAGTCGTCAATCTCTC+TGG | 0.452378 | 8.1:-6023358 | MS.gene012270:CDS |
| ATTGAAGAGCGCCTTGGAAA+AGG | 0.461660 | 8.1:-6023313 | MS.gene012270:CDS |
| CACTCACTACATATCATAGA+AGG | 0.462333 | 8.1:-6021782 | MS.gene012270:CDS |
| TTCTAGGAAATGTTGAGTTA+CGG | 0.463130 | 8.1:+6024137 | None:intergenic |
| TTCATTGACGTGAAGAGGCC+AGG | 0.465444 | 8.1:-6023262 | MS.gene012270:intron |
| GTTTGGCGACTGCAATTGTT+GGG | 0.465715 | 8.1:-6024107 | MS.gene012270:CDS |
| ATGCAGCAGCAAGGTTCACC+AGG | 0.479335 | 8.1:+6025655 | None:intergenic |
| TTACCTAAGTATCCCTATCT+TGG | 0.483862 | 8.1:+6021684 | None:intergenic |
| TTCCGACTACCGTGTGACTC+TGG | 0.484923 | 8.1:-6022628 | MS.gene012270:CDS |
| ATGGAAAGAATTAAGGAGGA+TGG | 0.490882 | 8.1:-6023286 | MS.gene012270:CDS |
| ACACCAAGATAGGGATACTT+AGG | 0.498887 | 8.1:-6021687 | None:intergenic |
| GCAATTGTTGGGCACAGTAA+AGG | 0.505246 | 8.1:-6024096 | MS.gene012270:intron |
| CTAACGAAGCTAGCTCATCT+TGG | 0.510470 | 8.1:+6021735 | None:intergenic |
| CAACTACTGGAGAGAGGCTG+AGG | 0.515668 | 8.1:-6024169 | MS.gene012270:CDS |
| GACAGGGTCCTTACAGTTCA+CGG | 0.517524 | 8.1:-6021866 | MS.gene012270:intron |
| TGCATTCTTTATCAATCTGA+AGG | 0.518096 | 8.1:+6022562 | None:intergenic |
| TGCATCTCCAACAGATATAA+CGG | 0.525489 | 8.1:+6021832 | None:intergenic |
| CTGAAGAACCGTGAACTGTA+AGG | 0.530377 | 8.1:+6021858 | None:intergenic |
| CAACAATTGCAGTCGCCAAA+CGG | 0.531049 | 8.1:+6024109 | None:intergenic |
| TCATCTTGGTGATTAGTGTA+GGG | 0.532866 | 8.1:+6021749 | None:intergenic |
| CTCATCTTGGTGATTAGTGT+AGG | 0.538424 | 8.1:+6021748 | None:intergenic |
| AGAAACCATACACCAAGATA+GGG | 0.545738 | 8.1:-6021696 | MS.gene012270:CDS |
| ATGGTTTCATTGACGTGAAG+AGG | 0.545822 | 8.1:-6023267 | MS.gene012270:CDS |
| CTCTGGACGCTATGATCTGA+AGG | 0.547034 | 8.1:-6023341 | MS.gene012270:CDS |
| CTTCTATGATATGTAGTGAG+TGG | 0.547715 | 8.1:+6021783 | None:intergenic |
| ATGATATGTAGTGAGTGGTT+TGG | 0.561435 | 8.1:+6021788 | None:intergenic |
| TTCCAGAGTCACACGGTAGT+CGG | 0.565937 | 8.1:+6022626 | None:intergenic |
| GATGGAATTGAAGAGCGCCT+TGG | 0.568111 | 8.1:-6023319 | MS.gene012270:CDS |
| TTCAGATTGATAAAGAATGC+AGG | 0.571124 | 8.1:-6022560 | MS.gene012270:intron |
| GAGATTGTAATCTTGTGCCA+TGG | 0.584009 | 8.1:-6025785 | MS.gene012270:CDS |
| TGAGTGGTTTGGTAAAATCT+GGG | 0.584588 | 8.1:+6021799 | None:intergenic |
| GGACGCTATGATCTGAAGGA+TGG | 0.595304 | 8.1:-6023337 | MS.gene012270:CDS |
| GTCATAATACCCAATAAGCA+TGG | 0.602475 | 8.1:-6025848 | MS.gene012270:CDS |
| TTATATGGAAAGAATTAAGG+AGG | 0.617189 | 8.1:-6023290 | MS.gene012270:CDS |
| GTATGGCAACTACTGGAGAG+AGG | 0.653608 | 8.1:-6024175 | MS.gene012270:CDS |
| TCTTGATGTAGGTGGTGGTG+TGG | 0.654415 | 8.1:-6023413 | MS.gene012270:intron |
| TGCAGCAGCAAGGTTCACCA+GGG | 0.686910 | 8.1:+6025656 | None:intergenic |
| GCAAACTTTCCAGAGTCACA+CGG | 0.699981 | 8.1:+6022619 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAACAGTTTAAATT+TGG | + | chr8.1:6022168-6022187 | None:intergenic | 10.0% |
| !! | TGAATAATTAAACTATTATT+AGG | - | chr8.1:6024233-6024252 | MS.gene012270:intron | 10.0% |
| !!! | TAATATCTTTTTTATACTAA+AGG | + | chr8.1:6023328-6023347 | None:intergenic | 10.0% |
| !!! | TATTAATTTAATCTCAATTT+TGG | - | chr8.1:6025694-6025713 | MS.gene012270:intron | 10.0% |
| !! | AATGTAATTTGACAAAATTA+GGG | + | chr8.1:6024670-6024689 | None:intergenic | 15.0% |
| !! | AGATATTATAACATATAAGT+TGG | - | chr8.1:6023340-6023359 | MS.gene012270:CDS | 15.0% |
| !! | GATATTATAACATATAAGTT+GGG | - | chr8.1:6023341-6023360 | MS.gene012270:CDS | 15.0% |
| !! | TACATTCATAAAATTGAATA+AGG | - | chr8.1:6025583-6025602 | MS.gene012270:intron | 15.0% |
| !! | TACTAAATATAATGCAATAA+TGG | + | chr8.1:6023735-6023754 | None:intergenic | 15.0% |
| !! | TTTAAACTCTACATAAATAA+AGG | - | chr8.1:6025294-6025313 | MS.gene012270:intron | 15.0% |
| !! | TTTGAACAAATAAAAATCAT+TGG | + | chr8.1:6025322-6025341 | None:intergenic | 15.0% |
| !!! | ATGGTCTAAAATTTAAAATT+TGG | - | chr8.1:6024605-6024624 | MS.gene012270:intron | 15.0% |
| !!! | ATGTTCTTTTTATTTGTAAT+TGG | - | chr8.1:6024133-6024152 | MS.gene012270:CDS | 15.0% |
| !!! | TGGTCTAAAATTTAAAATTT+GGG | - | chr8.1:6024606-6024625 | MS.gene012270:intron | 15.0% |
| !!! | TGTTCTTTTTATTTGTAATT+GGG | - | chr8.1:6024134-6024153 | MS.gene012270:CDS | 15.0% |
| !! | AAATCATGTAATATATGACA+GGG | - | chr8.1:6025797-6025816 | MS.gene012270:CDS | 20.0% |
| !! | ATACCAATGTTATATAACAT+TGG | - | chr8.1:6022579-6022598 | MS.gene012270:CDS | 20.0% |
| !! | ATACCAATGTTATATAACAT+TGG | + | chr8.1:6022598-6022579 | None:intergenic | 20.0% |
| !! | ATTATGACATGTTTATTGTT+TGG | + | chr8.1:6022927-6022946 | None:intergenic | 20.0% |
| !! | GAATGTAATTTGACAAAATT+AGG | + | chr8.1:6024671-6024690 | None:intergenic | 20.0% |
| !! | TATACTTTCTCAACAAAAAA+GGG | + | chr8.1:6025199-6025218 | None:intergenic | 20.0% |
| !! | TCATAAAATTGAATAAGGTT+GGG | - | chr8.1:6025588-6025607 | MS.gene012270:intron | 20.0% |
| !! | TTAAAATATCAAGAGTGATT+AGG | + | chr8.1:6025666-6025685 | None:intergenic | 20.0% |
| !! | TTACATTCTATTAAATGATC+TGG | - | chr8.1:6024683-6024702 | MS.gene012270:intron | 20.0% |
| !! | TTACTATTATTCAAACATAC+AGG | - | chr8.1:6024003-6024022 | MS.gene012270:intron | 20.0% |
| !! | TTAGTCAATATTGAAATAGA+AGG | - | chr8.1:6023892-6023911 | MS.gene012270:intron | 20.0% |
| !! | TTCATAAAATTGAATAAGGT+TGG | - | chr8.1:6025587-6025606 | MS.gene012270:intron | 20.0% |
| !!! | AAAACATAATGGATGAAATT+GGG | + | chr8.1:6021982-6022001 | None:intergenic | 20.0% |
| !!! | ATAAAAGAAACAAACTTTTG+AGG | + | chr8.1:6021928-6021947 | None:intergenic | 20.0% |
| !!! | ATTTCAATATTGACTAAGTT+AGG | + | chr8.1:6023889-6023908 | None:intergenic | 20.0% |
| !!! | GATATTTAAAGATTGCATTT+TGG | - | chr8.1:6023670-6023689 | MS.gene012270:intron | 20.0% |
| !!! | GTTCTTTTTATTTGTAATTG+GGG | - | chr8.1:6024135-6024154 | MS.gene012270:CDS | 20.0% |
| ! | AAAAAATTGACACCGTAAAA+TGG | + | chr8.1:6023378-6023397 | None:intergenic | 25.0% |
| ! | AGGTTATATGGAAAGAATTA+AGG | - | chr8.1:6024386-6024405 | MS.gene012270:intron | 25.0% |
| ! | ATTGAAAAGCTTCAGAAATT+TGG | - | chr8.1:6025551-6025570 | MS.gene012270:intron | 25.0% |
| ! | CAAATCATGTAATATATGAC+AGG | - | chr8.1:6025796-6025815 | MS.gene012270:CDS | 25.0% |
| ! | CTGAAGATAAGAAAACATAA+TGG | + | chr8.1:6021993-6022012 | None:intergenic | 25.0% |
| ! | CTTCATGCATATTTGTATTT+AGG | + | chr8.1:6025093-6025112 | None:intergenic | 25.0% |
| ! | CTTTAACAATAAGTTAGAAG+AGG | + | chr8.1:6024547-6024566 | None:intergenic | 25.0% |
| ! | GAGAAAAAACAGCTATATTA+AGG | + | chr8.1:6023457-6023476 | None:intergenic | 25.0% |
| ! | GTATACTTTCTCAACAAAAA+AGG | + | chr8.1:6025200-6025219 | None:intergenic | 25.0% |
| ! | GTTCTATGAAAAGTAAAAGA+AGG | - | chr8.1:6025380-6025399 | MS.gene012270:intron | 25.0% |
| ! | TAAAACATAAAATTGCAACC+AGG | + | chr8.1:6022510-6022529 | None:intergenic | 25.0% |
| ! | TATAACTCTGTATTTCATGT+CGG | - | chr8.1:6024051-6024070 | MS.gene012270:intron | 25.0% |
| ! | TATATGATTATTACTCTTGC+AGG | - | chr8.1:6024764-6024783 | MS.gene012270:intron | 25.0% |
| ! | TGTTTCATCTAATATGTACT+TGG | - | chr8.1:6023843-6023862 | MS.gene012270:intron | 25.0% |
| ! | TTATATGGAAAGAATTAAGG+AGG | - | chr8.1:6024389-6024408 | MS.gene012270:intron | 25.0% |
| ! | TTGAAAAGCTTCAGAAATTT+GGG | - | chr8.1:6025552-6025571 | MS.gene012270:intron | 25.0% |
| ! | TTGAAATAGAAGGAAAATCT+AGG | - | chr8.1:6023902-6023921 | MS.gene012270:intron | 25.0% |
| ! | TTGTCAAAATAATTTCCTGT+TGG | - | chr8.1:6023770-6023789 | MS.gene012270:intron | 25.0% |
| !! | AAAATAATTTCCTGTTGGTT+GGG | - | chr8.1:6023775-6023794 | MS.gene012270:intron | 25.0% |
| !! | AAAGATTGCATTTTGGATTT+AGG | - | chr8.1:6023677-6023696 | MS.gene012270:intron | 25.0% |
| !! | AATTTTTCACCATGCTTATT+GGG | + | chr8.1:6021843-6021862 | None:intergenic | 25.0% |
| !! | ATTAGGCATTTTATACATGA+AGG | + | chr8.1:6025649-6025668 | None:intergenic | 25.0% |
| !! | ATTATAACATATAAGTTGGG+TGG | - | chr8.1:6023344-6023363 | MS.gene012270:CDS | 25.0% |
| !! | ATTGCTCTAGATTTGAAAAA+AGG | - | chr8.1:6023056-6023075 | MS.gene012270:intron | 25.0% |
| !! | CATTATGTTTTCTTATCTTC+AGG | - | chr8.1:6021991-6022010 | MS.gene012270:intron | 25.0% |
| !! | GATTTTGAATGAAATGCTAT+AGG | - | chr8.1:6023299-6023318 | MS.gene012270:CDS | 25.0% |
| !! | TAATTTTTCACCATGCTTAT+TGG | + | chr8.1:6021844-6021863 | None:intergenic | 25.0% |
| !! | TATGTTTAAGATTTGAGACT+TGG | - | chr8.1:6022450-6022469 | MS.gene012270:intron | 25.0% |
| !! | TCTAATATGTACTTGGTAAT+TGG | - | chr8.1:6023850-6023869 | MS.gene012270:intron | 25.0% |
| !! | TTAGGCATTTTATACATGAA+GGG | + | chr8.1:6025648-6025667 | None:intergenic | 25.0% |
| !! | TTGCTCTAGATTTGAAAAAA+GGG | - | chr8.1:6023057-6023076 | MS.gene012270:intron | 25.0% |
| !!! | AACAGGAAATTATTTTGACA+AGG | + | chr8.1:6023771-6023790 | None:intergenic | 25.0% |
| !!! | ATAGCTGTTTTTTCTCTTTT+AGG | - | chr8.1:6023461-6023480 | MS.gene012270:intron | 25.0% |
| !!! | GAAAACATAATGGATGAAAT+TGG | + | chr8.1:6021983-6022002 | None:intergenic | 25.0% |
| !!! | TAGCTGTTTTTTCTCTTTTA+GGG | - | chr8.1:6023462-6023481 | MS.gene012270:intron | 25.0% |
| !!! | TGAGTAGAATTCTTTGATTT+TGG | - | chr8.1:6022757-6022776 | MS.gene012270:intron | 25.0% |
| !!! | TGGTTGTTTTATGTTTGTTT+AGG | - | chr8.1:6022470-6022489 | MS.gene012270:intron | 25.0% |
| AAATTGAATAAGGTTGGGTT+TGG | - | chr8.1:6025593-6025612 | MS.gene012270:intron | 30.0% | |
| AACAATAAGTTAGAAGAGGA+GGG | + | chr8.1:6024543-6024562 | None:intergenic | 30.0% | |
| AAGCACTTGTGAAATTGTTT+GGG | + | chr8.1:6022874-6022893 | None:intergenic | 30.0% | |
| AAGCATGGTGAAAAATTAGT+GGG | - | chr8.1:6021846-6021865 | MS.gene012270:CDS | 30.0% | |
| ACAAATTATACATCATCACC+TGG | + | chr8.1:6021712-6021731 | None:intergenic | 30.0% | |
| AGAACTATAGCTTATAGGAT+AGG | + | chr8.1:6024637-6024656 | None:intergenic | 30.0% | |
| AGCAGAAGCAATTAAAGTTA+CGG | - | chr8.1:6025258-6025277 | MS.gene012270:intron | 30.0% | |
| AGGTACATTGGTGAAAATAT+TGG | + | chr8.1:6023262-6023281 | None:intergenic | 30.0% | |
| AGTATAGTTCAGATGGTAAA+AGG | + | chr8.1:6025004-6025023 | None:intergenic | 30.0% | |
| ATATAACATTGGTATCCCAA+TGG | + | chr8.1:6022715-6022696 | None:intergenic | 30.0% | |
| ATATGAAGGTCTAAAGAAGA+AGG | + | chr8.1:6022650-6022669 | None:intergenic | 30.0% | |
| ATCAAGTGGTTAATACATGT+AGG | + | chr8.1:6023282-6023301 | None:intergenic | 30.0% | |
| CAAAATAATTTCCTGTTGGT+TGG | - | chr8.1:6023774-6023793 | MS.gene012270:intron | 30.0% | |
| CAGTAAGAACTATAGCTTAT+AGG | + | chr8.1:6024642-6024661 | None:intergenic | 30.0% | |
| CTAATGTTCGACTTCTATTA+AGG | - | chr8.1:6025422-6025441 | MS.gene012270:intron | 30.0% | |
| CTTATGTGTGACTAAAAGAT+AGG | + | chr8.1:6024446-6024465 | None:intergenic | 30.0% | |
| GAACTATAGCTTATAGGATA+GGG | + | chr8.1:6024636-6024655 | None:intergenic | 30.0% | |
| GCATTTCATTCAAAATCAAG+TGG | + | chr8.1:6023296-6023315 | None:intergenic | 30.0% | |
| GTTAATACATGTAGGTACAT+TGG | + | chr8.1:6023274-6023293 | None:intergenic | 30.0% | |
| TAAAATCGCCATTAAGTTTG+TGG | - | chr8.1:6022962-6022981 | MS.gene012270:intron | 30.0% | |
| TAAATGATGCAGTACTAAGA+GGG | - | chr8.1:6023817-6023836 | MS.gene012270:intron | 30.0% | |
| TAACAATAAGTTAGAAGAGG+AGG | + | chr8.1:6024544-6024563 | None:intergenic | 30.0% | |
| TAAGCACTTGTGAAATTGTT+TGG | + | chr8.1:6022875-6022894 | None:intergenic | 30.0% | |
| TAAGCATGGTGAAAAATTAG+TGG | - | chr8.1:6021845-6021864 | MS.gene012270:CDS | 30.0% | |
| TATACCTGCAGAATTTATGA+AGG | - | chr8.1:6025215-6025234 | MS.gene012270:intron | 30.0% | |
| TATATAACATTGGCCAATGA+AGG | - | chr8.1:6022589-6022608 | MS.gene012270:CDS | 30.0% | |
| TATATAACATTGGCCAATGA+AGG | + | chr8.1:6022608-6022589 | None:intergenic | 30.0% | |
| TGAAAAGCTTCAGAAATTTG+GGG | - | chr8.1:6025553-6025572 | MS.gene012270:intron | 30.0% | |
| TGCATTCTTTATCAATCTGA+AGG | + | chr8.1:6025120-6025139 | None:intergenic | 30.0% | |
| TGGCCAATGTTATATAACAT+TGG | - | chr8.1:6022685-6022704 | MS.gene012270:intron | 30.0% | |
| TGGCCAATGTTATATAACAT+TGG | + | chr8.1:6022704-6022685 | None:intergenic | 30.0% | |
| TGTACTAGATTTCTGTTATC+TGG | - | chr8.1:6023398-6023417 | MS.gene012270:CDS | 30.0% | |
| TTAAATGATGCAGTACTAAG+AGG | - | chr8.1:6023816-6023835 | MS.gene012270:intron | 30.0% | |
| TTCAGATTGATAAAGAATGC+AGG | - | chr8.1:6025119-6025138 | MS.gene012270:intron | 30.0% | |
| TTCTACTCAATTAAGTCTGT+AGG | + | chr8.1:6022746-6022765 | None:intergenic | 30.0% | |
| TTTAAGAGTTCCATGATTGT+TGG | - | chr8.1:6025358-6025377 | MS.gene012270:intron | 30.0% | |
| TTTCATAGAACCAACAATCA+TGG | + | chr8.1:6025371-6025390 | None:intergenic | 30.0% | |
| ! | ACTCTCGTGTTTAGTTTAAT+AGG | - | chr8.1:6023171-6023190 | MS.gene012270:intron | 30.0% |
| ! | ACTTATTTGAGTTCGTATAC+TGG | + | chr8.1:6022900-6022919 | None:intergenic | 30.0% |
| ! | CAATACATCACCAAATTTTG+TGG | + | chr8.1:6023114-6023133 | None:intergenic | 30.0% |
| ! | CTGTTAATAACTACCTTTTC+AGG | - | chr8.1:6021792-6021811 | MS.gene012270:CDS | 30.0% |
| ! | CTTTTCAATAACCAGACAAA+TGG | + | chr8.1:6025540-6025559 | None:intergenic | 30.0% |
| ! | CTTTTGTTCAAAACCTGAAA+AGG | + | chr8.1:6021808-6021827 | None:intergenic | 30.0% |
| ! | TAGGCATTTTATACATGAAG+GGG | + | chr8.1:6025647-6025666 | None:intergenic | 30.0% |
| ! | TGCTCTAGATTTGAAAAAAG+GGG | - | chr8.1:6023058-6023077 | MS.gene012270:intron | 30.0% |
| ! | TTCTAGGAAATGTTGAGTTA+CGG | + | chr8.1:6023545-6023564 | None:intergenic | 30.0% |
| ! | TTGATTATTTTCACAAGGGT+AGG | - | chr8.1:6023081-6023100 | MS.gene012270:intron | 30.0% |
| ! | TTTCCATATAACCTTTTCCA+AGG | + | chr8.1:6024380-6024399 | None:intergenic | 30.0% |
| !! | ATTTTACTCACGATTTGGAT+CGG | + | chr8.1:6022282-6022301 | None:intergenic | 30.0% |
| !! | CTTTAGAACCAAAAAAGAGT+AGG | + | chr8.1:6024888-6024907 | None:intergenic | 30.0% |
| !!! | ATTAAGGAGGTTTTAGATGT+TGG | - | chr8.1:6025438-6025457 | MS.gene012270:intron | 30.0% |
| !!! | TAAACACTCCTACTCTTTTT+TGG | - | chr8.1:6024877-6024896 | MS.gene012270:intron | 30.0% |
| !!! | TTAAGGAGGTTTTAGATGTT+GGG | - | chr8.1:6025439-6025458 | MS.gene012270:intron | 30.0% |
| AAAATTGCAACCAGGATTGA+AGG | + | chr8.1:6022502-6022521 | None:intergenic | 35.0% | |
| AAATTGTTTGGGAGAGCTTA+TGG | + | chr8.1:6022863-6022882 | None:intergenic | 35.0% | |
| AAGAAACCATACACCAAGAT+AGG | - | chr8.1:6025982-6026001 | MS.gene012270:intron | 35.0% | |
| AAGACCTTCATAAATTCTGC+AGG | + | chr8.1:6025222-6025241 | None:intergenic | 35.0% | |
| AGAAACCATACACCAAGATA+GGG | - | chr8.1:6025983-6026002 | MS.gene012270:intron | 35.0% | |
| ATCTTGCATCAGATCAAAAC+TGG | + | chr8.1:6022813-6022832 | None:intergenic | 35.0% | |
| ATGATATGTAGTGAGTGGTT+TGG | + | chr8.1:6025894-6025913 | None:intergenic | 35.0% | |
| ATGGAAAGAATTAAGGAGGA+TGG | - | chr8.1:6024393-6024412 | MS.gene012270:intron | 35.0% | |
| ATGTTCGACTTCTATTAAGG+AGG | - | chr8.1:6025425-6025444 | MS.gene012270:intron | 35.0% | |
| ATTAAGTCTGTAGGATCGAA+AGG | + | chr8.1:6022737-6022756 | None:intergenic | 35.0% | |
| CACTCACTACATATCATAGA+AGG | - | chr8.1:6025897-6025916 | MS.gene012270:intron | 35.0% | |
| CCATTAAGTTTGTGGATACA+GGG | - | chr8.1:6022970-6022989 | MS.gene012270:intron | 35.0% | |
| CTTCTATGATATGTAGTGAG+TGG | + | chr8.1:6025899-6025918 | None:intergenic | 35.0% | |
| CTTCTTTAGACCTTCATATG+TGG | - | chr8.1:6022651-6022670 | MS.gene012270:intron | 35.0% | |
| GAAATTGGGTACAGATACAA+AGG | + | chr8.1:6021968-6021987 | None:intergenic | 35.0% | |
| GAGCTTATGGAAATAGCTTA+AGG | + | chr8.1:6022850-6022869 | None:intergenic | 35.0% | |
| GGAAATAGCTTAAGGTTGTT+TGG | + | chr8.1:6022842-6022861 | None:intergenic | 35.0% | |
| GTCATAATACCCAATAAGCA+TGG | - | chr8.1:6021831-6021850 | MS.gene012270:CDS | 35.0% | |
| GTGTATCTGTATCTTGATGT+AGG | - | chr8.1:6024255-6024274 | MS.gene012270:intron | 35.0% | |
| TAATAGGAAACAACCGAATG+AGG | - | chr8.1:6023187-6023206 | MS.gene012270:intron | 35.0% | |
| TATCTGTATCTTGATGTAGG+TGG | - | chr8.1:6024258-6024277 | MS.gene012270:intron | 35.0% | |
| TATGTTGAAGCTTTCTGACT+AGG | - | chr8.1:6022376-6022395 | MS.gene012270:intron | 35.0% | |
| TCAATAACCAGACAAATGGA+AGG | + | chr8.1:6025536-6025555 | None:intergenic | 35.0% | |
| TCTCGTAAGTATAGTTCAGA+TGG | + | chr8.1:6025011-6025030 | None:intergenic | 35.0% | |
| TCTGTATTTCATGTCGGAAT+AGG | - | chr8.1:6024057-6024076 | MS.gene012270:intron | 35.0% | |
| TGACTAAAAGATAGGTTACC+TGG | + | chr8.1:6024438-6024457 | None:intergenic | 35.0% | |
| TGATATCATCCACTTGACTA+GGG | + | chr8.1:6025726-6025745 | None:intergenic | 35.0% | |
| TGCATCTCCAACAGATATAA+CGG | + | chr8.1:6025850-6025869 | None:intergenic | 35.0% | |
| TGTGAAAGAAAAACAAGCCA+TGG | + | chr8.1:6024586-6024605 | None:intergenic | 35.0% | |
| TTAAGTCTGTAGGATCGAAA+GGG | + | chr8.1:6022736-6022755 | None:intergenic | 35.0% | |
| TTTCCTAGAATCAAACCGTT+TGG | - | chr8.1:6023555-6023574 | MS.gene012270:intron | 35.0% | |
| ! | AGTGTTTTCGTAAGCTATCA+TGG | - | chr8.1:6022201-6022220 | MS.gene012270:intron | 35.0% |
| ! | CTGTCTAAAACTTGTCTTGT+TGG | + | chr8.1:6023651-6023670 | None:intergenic | 35.0% |
| ! | GTGGTAGTTTCTCCATTTTA+CGG | - | chr8.1:6023363-6023382 | MS.gene012270:CDS | 35.0% |
| ! | TCATCTTGGTGATTAGTGTA+GGG | + | chr8.1:6025933-6025952 | None:intergenic | 35.0% |
| ! | TGATTTTCCTTCCATTTGTC+TGG | - | chr8.1:6025526-6025545 | MS.gene012270:intron | 35.0% |
| !! | AGGGGTTGATTATTTTCACA+AGG | - | chr8.1:6023076-6023095 | MS.gene012270:intron | 35.0% |
| !! | AGTAGGAGTGTTTATGTTGA+CGG | + | chr8.1:6024871-6024890 | None:intergenic | 35.0% |
| !! | ATTGCAAGATTCTGGAACTA+AGG | - | chr8.1:6021872-6021891 | MS.gene012270:intron | 35.0% |
| !! | GCTTTGACTTTTCTGGAAAT+GGG | - | chr8.1:6022074-6022093 | MS.gene012270:intron | 35.0% |
| !! | GGGGTTGATTATTTTCACAA+GGG | - | chr8.1:6023077-6023096 | MS.gene012270:intron | 35.0% |
| !! | GGTTATATTTTTGAGCTGCT+TGG | - | chr8.1:6023923-6023942 | MS.gene012270:intron | 35.0% |
| !! | TCTTTTCGCTTTGACTTTTC+TGG | - | chr8.1:6022067-6022086 | MS.gene012270:intron | 35.0% |
| !! | TGAGTGGTTTGGTAAAATCT+GGG | + | chr8.1:6025883-6025902 | None:intergenic | 35.0% |
| !! | TTCTCTTTTAGGGAAAGTGA+TGG | - | chr8.1:6023472-6023491 | MS.gene012270:intron | 35.0% |
| !! | TTTGGTTCTAAAGAGTCTAG+AGG | - | chr8.1:6024895-6024914 | MS.gene012270:intron | 35.0% |
| !!! | TGGCTTGTTTTTCTTTCACA+TGG | - | chr8.1:6024586-6024605 | MS.gene012270:intron | 35.0% |
| AAACCTGCTACAAAGGAACT+CGG | - | chr8.1:6023949-6023968 | MS.gene012270:intron | 40.0% | |
| AAATGATCTGGCACTTGACA+TGG | - | chr8.1:6024695-6024714 | MS.gene012270:intron | 40.0% | |
| AACATAAACCACTCAAAGCC+AGG | + | chr8.1:6022362-6022381 | None:intergenic | 40.0% | |
| AAGGAATGAGGAGAAACGAA+AGG | - | chr8.1:6025464-6025483 | MS.gene012270:intron | 40.0% | |
| ACATAAACCACTCAAAGCCA+GGG | + | chr8.1:6022361-6022380 | None:intergenic | 40.0% | |
| AGAGAAGGGAAGAAAATGAG+GGG | - | chr8.1:6025495-6025514 | MS.gene012270:intron | 40.0% | |
| AGGAATGAGGAGAAACGAAA+GGG | - | chr8.1:6025465-6025484 | MS.gene012270:intron | 40.0% | |
| AGTGATGGTTCGTTTCAGTA+TGG | - | chr8.1:6023487-6023506 | MS.gene012270:intron | 40.0% | |
| AGTTTCAATTCGTCTTTGCG+TGG | - | chr8.1:6024464-6024483 | MS.gene012270:intron | 40.0% | |
| ATGGTTTCATTGACGTGAAG+AGG | - | chr8.1:6024412-6024431 | MS.gene012270:intron | 40.0% | |
| ATGTCATGTCATGACTCATG+TGG | + | chr8.1:6024835-6024854 | None:intergenic | 40.0% | |
| ATTGGAGCTAGCTATAGATG+TGG | + | chr8.1:6023244-6023263 | None:intergenic | 40.0% | |
| CCCTGTATCCACAAACTTAA+TGG | + | chr8.1:6022973-6022992 | None:intergenic | 40.0% | |
| GACACCACTTGTGTATCATT+GGG | + | chr8.1:6022714-6022733 | None:intergenic | 40.0% | |
| GAGAGAAGGGAAGAAAATGA+GGG | - | chr8.1:6025494-6025513 | MS.gene012270:intron | 40.0% | |
| GAGATTGTAATCTTGTGCCA+TGG | - | chr8.1:6021894-6021913 | MS.gene012270:intron | 40.0% | |
| GCCATTAAGTTTGTGGATAC+AGG | - | chr8.1:6022969-6022988 | MS.gene012270:intron | 40.0% | |
| GTATCCCAATGATACACAAG+TGG | - | chr8.1:6022707-6022726 | MS.gene012270:intron | 40.0% | |
| GTGATATCATCCACTTGACT+AGG | + | chr8.1:6025727-6025746 | None:intergenic | 40.0% | |
| GTGGGTATATTGCAAGATTC+TGG | - | chr8.1:6021864-6021883 | MS.gene012270:CDS | 40.0% | |
| GTTGCAATTCATGAACCCAA+TGG | + | chr8.1:6023022-6023041 | None:intergenic | 40.0% | |
| GTTTCAATTCGTCTTTGCGT+GGG | - | chr8.1:6024465-6024484 | MS.gene012270:intron | 40.0% | |
| TCAGACACCGTTATATCTGT+TGG | - | chr8.1:6025840-6025859 | MS.gene012270:CDS | 40.0% | |
| TCTCATTCATGCTCTCCATT+GGG | - | chr8.1:6023004-6023023 | MS.gene012270:intron | 40.0% | |
| TCTCTCTCTTCAGAAAAACC+AGG | - | chr8.1:6021691-6021710 | MS.gene012270:CDS | 40.0% | |
| TCTTCAGGAATCAAAAACCC+TGG | - | chr8.1:6022006-6022025 | MS.gene012270:intron | 40.0% | |
| TCTTGCATTATGTGGATGAC+TGG | - | chr8.1:6024104-6024123 | MS.gene012270:CDS | 40.0% | |
| TGGGCACAGTAAAGGTAAAT+TGG | - | chr8.1:6023591-6023610 | MS.gene012270:intron | 40.0% | |
| TTGGAGCTAGCTATAGATGT+GGG | + | chr8.1:6023243-6023262 | None:intergenic | 40.0% | |
| TTGGCAAAAACCTGCTACAA+AGG | - | chr8.1:6023942-6023961 | MS.gene012270:intron | 40.0% | |
| TTTCAATTCGTCTTTGCGTG+GGG | - | chr8.1:6024466-6024485 | MS.gene012270:intron | 40.0% | |
| ! | ACATTTTCATGCGATTTCGC+AGG | + | chr8.1:6022306-6022325 | None:intergenic | 40.0% |
| ! | AGTATCCCTATCTTGGTGTA+TGG | + | chr8.1:6025991-6026010 | None:intergenic | 40.0% |
| ! | CAGGGATTTTACTCACGATT+TGG | + | chr8.1:6022287-6022306 | None:intergenic | 40.0% |
| ! | CATTTTCATGCGATTTCGCA+GGG | + | chr8.1:6022305-6022324 | None:intergenic | 40.0% |
| ! | CCACATAATGCAAGAGCATA+GGG | + | chr8.1:6024099-6024118 | None:intergenic | 40.0% |
| ! | CTAAAACTTGTCTTGTTGGC+AGG | + | chr8.1:6023647-6023666 | None:intergenic | 40.0% |
| ! | CTCATCTTGGTGATTAGTGT+AGG | + | chr8.1:6025934-6025953 | None:intergenic | 40.0% |
| ! | TATGCATGTGAAGTGCTATG+CGG | + | chr8.1:6022619-6022638 | None:intergenic | 40.0% |
| ! | TCCACATAATGCAAGAGCAT+AGG | + | chr8.1:6024100-6024119 | None:intergenic | 40.0% |
| !! | ACACACTAAGTGTTGAGAAG+TGG | - | chr8.1:6024928-6024947 | MS.gene012270:intron | 40.0% |
| !! | ACACTAAGTGTTGAGAAGTG+GGG | - | chr8.1:6024930-6024949 | MS.gene012270:intron | 40.0% |
| !! | CACACTAAGTGTTGAGAAGT+GGG | - | chr8.1:6024929-6024948 | MS.gene012270:intron | 40.0% |
| !! | CGCTTTGACTTTTCTGGAAA+TGG | - | chr8.1:6022073-6022092 | MS.gene012270:intron | 40.0% |
| !! | GTGAGTGGTTTGGTAAAATC+TGG | + | chr8.1:6025884-6025903 | None:intergenic | 40.0% |
| !!! | AGGTTTTAGATGTTGGGAGA+AGG | - | chr8.1:6025445-6025464 | MS.gene012270:intron | 40.0% |
| AAAGCAGTCGTCAATCTCTC+TGG | - | chr8.1:6024321-6024340 | MS.gene012270:intron | 45.0% | |
| AATGGTACACAAGTGGTGTC+CGG | + | chr8.1:6022556-6022575 | None:intergenic | 45.0% | |
| AGAGCATGAGCTACCTCATT+CGG | + | chr8.1:6023203-6023222 | None:intergenic | 45.0% | |
| AGATGTTGGGAGAAGGAATG+AGG | - | chr8.1:6025452-6025471 | MS.gene012270:intron | 45.0% | |
| AGGAGAAACGAAAGGGGAAT+GGG | - | chr8.1:6025472-6025491 | MS.gene012270:intron | 45.0% | |
| AGGAGCGATGCCACAAAATT+TGG | - | chr8.1:6023101-6023120 | MS.gene012270:intron | 45.0% | |
| ATCTTTACAGCCCAACCAAC+AGG | + | chr8.1:6023788-6023807 | None:intergenic | 45.0% | |
| ATGTGGCAGATCATCTATGG+TGG | + | chr8.1:6024818-6024837 | None:intergenic | 45.0% | |
| CAACAATTGCAGTCGCCAAA+CGG | + | chr8.1:6023573-6023592 | None:intergenic | 45.0% | |
| CATATGTGGCACACCTTCAT+TGG | - | chr8.1:6022665-6022684 | MS.gene012270:intron | 45.0% | |
| CATGCTCTTGCAAGTTGCAA+GGG | - | chr8.1:6023215-6023234 | MS.gene012270:intron | 45.0% | |
| CATTTGATATGCTGTGGTGC+GGG | + | chr8.1:6024972-6024991 | None:intergenic | 45.0% | |
| CCCTATGCTCTTGCATTATG+TGG | - | chr8.1:6024096-6024115 | MS.gene012270:intron | 45.0% | |
| CGTTTCAGTATGGCAACTAC+TGG | - | chr8.1:6023497-6023516 | MS.gene012270:intron | 45.0% | |
| CTAACGAAGCTAGCTCATCT+TGG | + | chr8.1:6025947-6025966 | None:intergenic | 45.0% | |
| CTCATGTGGCAGATCATCTA+TGG | + | chr8.1:6024821-6024840 | None:intergenic | 45.0% | |
| CTGAAGAACCGTGAACTGTA+AGG | + | chr8.1:6025824-6025843 | None:intergenic | 45.0% | |
| CTGTATCTTGATGTAGGTGG+TGG | - | chr8.1:6024261-6024280 | MS.gene012270:intron | 45.0% | |
| GACACCACTTGTGTACCATT+GGG | - | chr8.1:6022556-6022575 | MS.gene012270:intron | 45.0% | |
| GCAAACTTTCCAGAGTCACA+CGG | + | chr8.1:6025063-6025082 | None:intergenic | 45.0% | |
| GCAATTGTTGGGCACAGTAA+AGG | - | chr8.1:6023583-6023602 | MS.gene012270:intron | 45.0% | |
| GCATTATGTGGATGACTGGA+TGG | - | chr8.1:6024108-6024127 | MS.gene012270:CDS | 45.0% | |
| GCATTTGATATGCTGTGGTG+CGG | + | chr8.1:6024973-6024992 | None:intergenic | 45.0% | |
| GCGCCTTGGAAAAGGTTATA+TGG | - | chr8.1:6024374-6024393 | MS.gene012270:intron | 45.0% | |
| GGAATGAGGAGAAACGAAAG+GGG | - | chr8.1:6025466-6025485 | MS.gene012270:intron | 45.0% | |
| GGACACCACTTGTGTATCAT+TGG | + | chr8.1:6022715-6022734 | None:intergenic | 45.0% | |
| GGAGAGAAGGGAAGAAAATG+AGG | - | chr8.1:6025493-6025512 | MS.gene012270:intron | 45.0% | |
| GTATCCCAATGGTACACAAG+TGG | + | chr8.1:6022563-6022582 | None:intergenic | 45.0% | |
| GTCTCATTCATGCTCTCCAT+TGG | - | chr8.1:6023003-6023022 | MS.gene012270:intron | 45.0% | |
| GTTTGGCGACTGCAATTGTT+GGG | - | chr8.1:6023572-6023591 | MS.gene012270:intron | 45.0% | |
| TAGGTACGATCCTTCAATCC+TGG | - | chr8.1:6022489-6022508 | MS.gene012270:intron | 45.0% | |
| TCATGCTCTTGCAAGTTGCA+AGG | - | chr8.1:6023214-6023233 | MS.gene012270:intron | 45.0% | |
| TCGCCAAACGGTTTGATTCT+AGG | + | chr8.1:6023561-6023580 | None:intergenic | 45.0% | |
| TGGTTTACTCCCTAGTCAAG+TGG | - | chr8.1:6025714-6025733 | MS.gene012270:intron | 45.0% | |
| TTCAATTCGTCTTTGCGTGG+GGG | - | chr8.1:6024467-6024486 | MS.gene012270:intron | 45.0% | |
| TTCAGATGGTAAAAGGCTGC+AGG | + | chr8.1:6024997-6025016 | None:intergenic | 45.0% | |
| ! | ACTCACGATTTGGATCGGTA+GGG | + | chr8.1:6022277-6022296 | None:intergenic | 45.0% |
| ! | CTTTTTCCAATGCAGCAGCA+AGG | + | chr8.1:6022036-6022055 | None:intergenic | 45.0% |
| ! | TACTCACGATTTGGATCGGT+AGG | + | chr8.1:6022278-6022297 | None:intergenic | 45.0% |
| ! | TGAAGGTGTGCCACATATGA+AGG | + | chr8.1:6022664-6022683 | None:intergenic | 45.0% |
| ! | TGTGACTCTGGAAAGTTTGC+TGG | - | chr8.1:6025063-6025082 | MS.gene012270:intron | 45.0% |
| !! | ATTGAAGAGCGCCTTGGAAA+AGG | - | chr8.1:6024366-6024385 | MS.gene012270:intron | 45.0% |
| !! | CACTAAGTGTTGAGAAGTGG+GGG | - | chr8.1:6024931-6024950 | MS.gene012270:intron | 45.0% |
| !! | CAGGAGCATTTGATATGCTG+TGG | + | chr8.1:6024978-6024997 | None:intergenic | 45.0% |
| !! | CTTTTGAGGAGCGAAAACCA+TGG | + | chr8.1:6021914-6021933 | None:intergenic | 45.0% |
| AAGTGGTGTCCGGATCGAAA+GGG | + | chr8.1:6022546-6022565 | None:intergenic | 50.0% | |
| ACGAGACTAAGCACACTTGC+AGG | - | chr8.1:6025025-6025044 | MS.gene012270:intron | 50.0% | |
| ATGGTGGTTCCAGAGTCACA+CGG | + | chr8.1:6024802-6024821 | None:intergenic | 50.0% | |
| CGTTTGGCGACTGCAATTGT+TGG | - | chr8.1:6023571-6023590 | MS.gene012270:intron | 50.0% | |
| CTCTGGACGCTATGATCTGA+AGG | - | chr8.1:6024338-6024357 | MS.gene012270:intron | 50.0% | |
| GAAAGGGGAATGGGAGAGAA+GGG | - | chr8.1:6025481-6025500 | MS.gene012270:intron | 50.0% | |
| GACAGGGTCCTTACAGTTCA+CGG | - | chr8.1:6025813-6025832 | MS.gene012270:CDS | 50.0% | |
| GAGGAGAAACGAAAGGGGAA+TGG | - | chr8.1:6025471-6025490 | MS.gene012270:intron | 50.0% | |
| GCTGCTGCATTGGAAAAAGC+TGG | - | chr8.1:6022037-6022056 | MS.gene012270:intron | 50.0% | |
| GGACACCACTTGTGTACCAT+TGG | - | chr8.1:6022555-6022574 | MS.gene012270:intron | 50.0% | |
| GGACGCTATGATCTGAAGGA+TGG | - | chr8.1:6024342-6024361 | MS.gene012270:intron | 50.0% | |
| GTATGGCAACTACTGGAGAG+AGG | - | chr8.1:6023504-6023523 | MS.gene012270:intron | 50.0% | |
| GTTGAGAAGTGGGGGAATTG+CGG | - | chr8.1:6024939-6024958 | MS.gene012270:intron | 50.0% | |
| TCGTGCGATTCTAACAACCC+TGG | - | chr8.1:6022341-6022360 | MS.gene012270:intron | 50.0% | |
| TGACCGAGTTCCTTTGTAGC+AGG | + | chr8.1:6023955-6023974 | None:intergenic | 50.0% | |
| TTCATTGACGTGAAGAGGCC+AGG | - | chr8.1:6024417-6024436 | MS.gene012270:intron | 50.0% | |
| TTCCAGAGTCACACGGTAGT+CGG | + | chr8.1:6025056-6025075 | None:intergenic | 50.0% | |
| TTGAGAAGTGGGGGAATTGC+GGG | - | chr8.1:6024940-6024959 | MS.gene012270:intron | 50.0% | |
| ! | CTCACGATTTGGATCGGTAG+GGG | + | chr8.1:6022276-6022295 | None:intergenic | 50.0% |
| ! | CTTGCTATCCCCTTTCGATC+CGG | - | chr8.1:6022534-6022553 | MS.gene012270:intron | 50.0% |
| ! | GCGTGGGGGCATGTTATATT+AGG | - | chr8.1:6024481-6024500 | MS.gene012270:intron | 50.0% |
| ! | GTGTATTTGCTGCGAGACCA+TGG | - | chr8.1:6024566-6024585 | MS.gene012270:intron | 50.0% |
| ! | TCTTGATGTAGGTGGTGGTG+TGG | - | chr8.1:6024266-6024285 | MS.gene012270:intron | 50.0% |
| ! | TTCTGAGTACCGTGTGACTC+TGG | - | chr8.1:6024790-6024809 | MS.gene012270:intron | 50.0% |
| !! | CTAACAACCCTGGCTTTGAG+TGG | - | chr8.1:6022351-6022370 | MS.gene012270:intron | 50.0% |
| !! | GATGGAATTGAAGAGCGCCT+TGG | - | chr8.1:6024360-6024379 | MS.gene012270:intron | 50.0% |
| AGTGGTGTCCGGATCGAAAG+GGG | + | chr8.1:6022545-6022564 | None:intergenic | 55.0% | |
| ATGCAGCAGCAAGGTTCACC+AGG | + | chr8.1:6022027-6022046 | None:intergenic | 55.0% | |
| CAACTACTGGAGAGAGGCTG+AGG | - | chr8.1:6023510-6023529 | MS.gene012270:intron | 55.0% | |
| CAAGTGGTGTCCGGATCGAA+AGG | + | chr8.1:6022547-6022566 | None:intergenic | 55.0% | |
| CGAAAGGGGAATGGGAGAGA+AGG | - | chr8.1:6025480-6025499 | MS.gene012270:intron | 55.0% | |
| GCTATGCGGCACACCTTCAT+TGG | + | chr8.1:6022605-6022624 | None:intergenic | 55.0% | |
| GGTGAACCTTGCTGCTGCAT+TGG | - | chr8.1:6022027-6022046 | MS.gene012270:intron | 55.0% | |
| TGATATGCTGTGGTGCGGGT+TGG | + | chr8.1:6024968-6024987 | None:intergenic | 55.0% | |
| TGCAGCAGCAAGGTTCACCA+GGG | + | chr8.1:6022026-6022045 | None:intergenic | 55.0% | |
| TTCCGACTACCGTGTGACTC+TGG | - | chr8.1:6025051-6025070 | MS.gene012270:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 6021688 | 6026013 | 6021688 | ID=MS.gene012270 |
| chr8.1 | mRNA | 6021688 | 6026013 | 6021688 | ID=MS.gene012270.t1;Parent=MS.gene012270 |
| chr8.1 | exon | 6025989 | 6026013 | 6025989 | ID=MS.gene012270.t1.exon1;Parent=MS.gene012270.t1 |
| chr8.1 | CDS | 6025989 | 6026013 | 6025989 | ID=cds.MS.gene012270.t1;Parent=MS.gene012270.t1 |
| chr8.1 | exon | 6025769 | 6025887 | 6025769 | ID=MS.gene012270.t1.exon2;Parent=MS.gene012270.t1 |
| chr8.1 | CDS | 6025769 | 6025887 | 6025769 | ID=cds.MS.gene012270.t1;Parent=MS.gene012270.t1 |
| chr8.1 | exon | 6025606 | 6025688 | 6025606 | ID=MS.gene012270.t1.exon3;Parent=MS.gene012270.t1 |
| chr8.1 | CDS | 6025606 | 6025688 | 6025606 | ID=cds.MS.gene012270.t1;Parent=MS.gene012270.t1 |
| chr8.1 | exon | 6024097 | 6024218 | 6024097 | ID=MS.gene012270.t1.exon4;Parent=MS.gene012270.t1 |
| chr8.1 | CDS | 6024097 | 6024218 | 6024097 | ID=cds.MS.gene012270.t1;Parent=MS.gene012270.t1 |
| chr8.1 | exon | 6023263 | 6023424 | 6023263 | ID=MS.gene012270.t1.exon5;Parent=MS.gene012270.t1 |
| chr8.1 | CDS | 6023263 | 6023424 | 6023263 | ID=cds.MS.gene012270.t1;Parent=MS.gene012270.t1 |
| chr8.1 | exon | 6022561 | 6022654 | 6022561 | ID=MS.gene012270.t1.exon6;Parent=MS.gene012270.t1 |
| chr8.1 | CDS | 6022561 | 6022654 | 6022561 | ID=cds.MS.gene012270.t1;Parent=MS.gene012270.t1 |
| chr8.1 | exon | 6021688 | 6021883 | 6021688 | ID=MS.gene012270.t1.exon7;Parent=MS.gene012270.t1 |
| chr8.1 | CDS | 6021688 | 6021883 | 6021688 | ID=cds.MS.gene012270.t1;Parent=MS.gene012270.t1 |
| Gene Sequence |
| Protein sequence |
