Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85627.t1 | XP_003595190.1 | 92.2 | 269 | 20 | 1 | 1 | 268 | 1 | 269 | 3.50E-137 | 497.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85627.t1 | G7IIJ8 | 92.2 | 269 | 20 | 1 | 1 | 268 | 1 | 269 | 2.5e-137 | 497.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04919 | MS.gene85627 | 0.815336 | 9.74E-52 | -1.69E-46 |
| MS.gene04920 | MS.gene85627 | 0.824494 | 7.83E-54 | -1.69E-46 |
| MS.gene049254 | MS.gene85627 | 0.825983 | 3.48E-54 | -1.69E-46 |
| MS.gene049283 | MS.gene85627 | 0.848117 | 7.52E-60 | -1.69E-46 |
| MS.gene049499 | MS.gene85627 | 0.83897 | 2.10E-57 | -1.69E-46 |
| MS.gene050559 | MS.gene85627 | 0.819492 | 1.13E-52 | -1.69E-46 |
| MS.gene050561 | MS.gene85627 | 0.802873 | 4.56E-49 | -1.69E-46 |
| MS.gene050562 | MS.gene85627 | 0.805133 | 1.55E-49 | -1.69E-46 |
| MS.gene051699 | MS.gene85627 | 0.82188 | 3.19E-53 | -1.69E-46 |
| MS.gene051832 | MS.gene85627 | 0.856548 | 2.99E-62 | -1.69E-46 |
| MS.gene052533 | MS.gene85627 | 0.818427 | 1.97E-52 | -1.69E-46 |
| MS.gene053045 | MS.gene85627 | 0.814518 | 1.48E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene85627 | 0.800048 | 1.73E-48 | -1.69E-46 |
| MS.gene053298 | MS.gene85627 | 0.818826 | 1.60E-52 | -1.69E-46 |
| MS.gene053340 | MS.gene85627 | 0.807569 | 4.74E-50 | -1.69E-46 |
| MS.gene053963 | MS.gene85627 | 0.849293 | 3.55E-60 | -1.69E-46 |
| MS.gene054222 | MS.gene85627 | 0.845702 | 3.44E-59 | -1.69E-46 |
| MS.gene054576 | MS.gene85627 | 0.814213 | 1.73E-51 | -1.69E-46 |
| MS.gene054892 | MS.gene85627 | 0.802717 | 4.91E-49 | -1.69E-46 |
| MS.gene054957 | MS.gene85627 | 0.808981 | 2.37E-50 | -1.69E-46 |
| MS.gene055229 | MS.gene85627 | 0.802092 | 6.61E-49 | -1.69E-46 |
| MS.gene05539 | MS.gene85627 | 0.800886 | 1.17E-48 | -1.69E-46 |
| MS.gene055724 | MS.gene85627 | 0.80446 | 2.14E-49 | -1.69E-46 |
| MS.gene055841 | MS.gene85627 | 0.80511 | 1.56E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene85627 | 0.825588 | 4.32E-54 | -1.69E-46 |
| MS.gene057102 | MS.gene85627 | 0.858001 | 1.11E-62 | -1.69E-46 |
| MS.gene057155 | MS.gene85627 | 0.820966 | 5.19E-53 | -1.69E-46 |
| MS.gene057208 | MS.gene85627 | 0.827507 | 1.51E-54 | -1.69E-46 |
| MS.gene057893 | MS.gene85627 | -0.823977 | 1.04E-53 | -1.69E-46 |
| MS.gene058008 | MS.gene85627 | 0.807589 | 4.70E-50 | -1.69E-46 |
| MS.gene058159 | MS.gene85627 | 0.800032 | 1.74E-48 | -1.69E-46 |
| MS.gene058279 | MS.gene85627 | 0.813175 | 2.92E-51 | -1.69E-46 |
| MS.gene058592 | MS.gene85627 | 0.809716 | 1.65E-50 | -1.69E-46 |
| MS.gene058897 | MS.gene85627 | 0.802809 | 4.70E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene85627 | 0.843698 | 1.19E-58 | -1.69E-46 |
| MS.gene05985 | MS.gene85627 | -0.864443 | 1.21E-64 | -1.69E-46 |
| MS.gene059935 | MS.gene85627 | 0.814581 | 1.43E-51 | -1.69E-46 |
| MS.gene060012 | MS.gene85627 | 0.80758 | 4.72E-50 | -1.69E-46 |
| MS.gene060365 | MS.gene85627 | 0.84283 | 2.03E-58 | -1.69E-46 |
| MS.gene060412 | MS.gene85627 | 0.80789 | 4.05E-50 | -1.69E-46 |
| MS.gene060933 | MS.gene85627 | 0.819028 | 1.44E-52 | -1.69E-46 |
| MS.gene060935 | MS.gene85627 | 0.824486 | 7.86E-54 | -1.69E-46 |
| MS.gene060937 | MS.gene85627 | 0.840914 | 6.52E-58 | -1.69E-46 |
| MS.gene061188 | MS.gene85627 | 0.822162 | 2.75E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene026084 | MS.gene85627 | PPI |
| MS.gene025118 | MS.gene85627 | PPI |
| MS.gene85625 | MS.gene85627 | PPI |
| MS.gene025114 | MS.gene85627 | PPI |
| MS.gene059902 | MS.gene85627 | PPI |
| MS.gene026083 | MS.gene85627 | PPI |
| MS.gene026088 | MS.gene85627 | PPI |
| MS.gene051858 | MS.gene85627 | PPI |
| MS.gene026085 | MS.gene85627 | PPI |
| MS.gene012270 | MS.gene85627 | PPI |
| MS.gene85627 | MS.gene059902 | PPI |
| MS.gene84672 | MS.gene85627 | PPI |
| MS.gene85626 | MS.gene85627 | PPI |
| MS.gene83168 | MS.gene85627 | PPI |
| MS.gene57567 | MS.gene85627 | PPI |
| MS.gene84671 | MS.gene85627 | PPI |
| MS.gene026086 | MS.gene85627 | PPI |
| MS.gene57569 | MS.gene85627 | PPI |
| MS.gene025116 | MS.gene85627 | PPI |
| MS.gene025115 | MS.gene85627 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85627.t1 | MTR_2g039480 | 92.193 | 269 | 20 | 1 | 1 | 268 | 1 | 269 | 0.0 | 500 |
| MS.gene85627.t1 | MTR_2g039510 | 80.755 | 265 | 50 | 1 | 5 | 268 | 9 | 273 | 4.77e-159 | 443 |
| MS.gene85627.t1 | MTR_2g039570 | 75.954 | 262 | 62 | 1 | 7 | 268 | 5 | 265 | 2.23e-148 | 416 |
| MS.gene85627.t1 | MTR_2g039450 | 76.538 | 260 | 60 | 1 | 5 | 264 | 9 | 267 | 1.02e-143 | 405 |
| MS.gene85627.t1 | MTR_4g126050 | 68.482 | 257 | 78 | 2 | 10 | 266 | 69 | 322 | 1.11e-127 | 365 |
| MS.gene85627.t1 | MTR_4g126120 | 62.500 | 256 | 93 | 2 | 5 | 260 | 9 | 261 | 6.86e-119 | 341 |
| MS.gene85627.t1 | MTR_4g126120 | 62.745 | 255 | 92 | 2 | 5 | 259 | 18 | 269 | 1.04e-118 | 341 |
| MS.gene85627.t1 | MTR_1g016050 | 57.752 | 258 | 107 | 1 | 10 | 267 | 8 | 263 | 3.18e-106 | 309 |
| MS.gene85627.t1 | MTR_4g126050 | 67.052 | 173 | 54 | 2 | 9 | 181 | 68 | 237 | 1.08e-78 | 238 |
| MS.gene85627.t1 | MTR_1g016060 | 44.444 | 180 | 79 | 2 | 89 | 267 | 470 | 629 | 1.11e-35 | 134 |
| MS.gene85627.t1 | MTR_2g039550 | 45.333 | 75 | 15 | 2 | 2 | 75 | 21 | 70 | 4.95e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85627.t1 | AT5G11910 | 60.800 | 250 | 96 | 1 | 8 | 257 | 38 | 285 | 9.18e-110 | 320 |
| MS.gene85627.t1 | AT5G11910 | 60.800 | 250 | 96 | 1 | 8 | 257 | 20 | 267 | 1.04e-109 | 319 |
| MS.gene85627.t1 | AT3G47590 | 60.159 | 251 | 96 | 2 | 10 | 260 | 59 | 305 | 4.08e-109 | 318 |
| MS.gene85627.t1 | AT1G29840 | 57.198 | 257 | 106 | 2 | 4 | 260 | 56 | 308 | 4.28e-108 | 315 |
| MS.gene85627.t1 | AT3G47560 | 58.635 | 249 | 99 | 2 | 9 | 257 | 9 | 253 | 2.75e-106 | 309 |
| MS.gene85627.t1 | AT3G47560 | 58.635 | 249 | 99 | 2 | 9 | 257 | 45 | 289 | 7.04e-106 | 309 |
| MS.gene85627.t1 | AT3G47560 | 53.480 | 273 | 101 | 2 | 9 | 257 | 9 | 279 | 1.25e-102 | 301 |
| MS.gene85627.t1 | AT3G47560 | 52.899 | 276 | 99 | 3 | 9 | 257 | 9 | 280 | 1.34e-99 | 293 |
| MS.gene85627.t1 | AT3G47560 | 48.667 | 300 | 101 | 3 | 9 | 257 | 9 | 306 | 3.40e-96 | 285 |
| MS.gene85627.t1 | AT2G19550 | 52.157 | 255 | 111 | 6 | 11 | 260 | 5 | 253 | 1.97e-89 | 268 |
| MS.gene85627.t1 | AT3G47590 | 59.873 | 157 | 61 | 1 | 10 | 166 | 59 | 213 | 2.96e-65 | 203 |
| MS.gene85627.t1 | AT5G11910 | 62.143 | 140 | 51 | 1 | 8 | 147 | 38 | 175 | 9.87e-59 | 185 |
| MS.gene85627.t1 | AT5G11910 | 62.143 | 140 | 51 | 1 | 8 | 147 | 20 | 157 | 1.06e-58 | 184 |
Find 44 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCCTTGGTAAAGATTATT+TGG | 0.131647 | 2.1:-48320851 | MS.gene85627:CDS |
| AAGATTATTTGGAAAGAATT+AGG | 0.246216 | 2.1:-48320840 | MS.gene85627:CDS |
| ACACAAGATAACAATGTCTT+TGG | 0.327545 | 2.1:+48324172 | None:intergenic |
| ATTGAACCTTGCTGTTGAAT+TGG | 0.339068 | 2.1:-48324008 | MS.gene85627:CDS |
| AGCGAAGGTTCATTTAAGTT+TGG | 0.351159 | 2.1:-48321499 | MS.gene85627:CDS |
| AAAACTGTTGTCAACGTCTC+TGG | 0.357635 | 2.1:-48320904 | MS.gene85627:CDS |
| CGTGTAATCCGTGCAATTGT+CGG | 0.375180 | 2.1:-48321415 | MS.gene85627:CDS |
| CATTTAAGTTTGGTAATCAA+TGG | 0.389653 | 2.1:-48321489 | MS.gene85627:CDS |
| GGCATATTACATGAATGTTC+TGG | 0.395114 | 2.1:-48324200 | MS.gene85627:CDS |
| TGTTACTGAGGAAAGTTTGA+TGG | 0.410920 | 2.1:-48320332 | MS.gene85627:CDS |
| GGTACCCTTGTCGTGGTCAA+TGG | 0.414635 | 2.1:+48319200 | None:intergenic |
| CGGAAGAACCGTGAATTGTA+AGG | 0.458915 | 2.1:+48319367 | None:intergenic |
| GGATTACACGATTTGATTCA+CGG | 0.464996 | 2.1:+48321428 | None:intergenic |
| TAGCAAACTCGTGTGCATCT+TGG | 0.467700 | 2.1:+48319328 | None:intergenic |
| GGCAGGGTCCTTACAATTCA+CGG | 0.468516 | 2.1:-48319375 | MS.gene85627:intron |
| GTGATATGCAACTTGTGGTT+TGG | 0.476829 | 2.1:+48319297 | None:intergenic |
| TTGGAAAGAATTAGGAAGGA+AGG | 0.481541 | 2.1:-48320832 | MS.gene85627:CDS |
| CTTCAGTGATATGCAACTTG+TGG | 0.490269 | 2.1:+48319292 | None:intergenic |
| GACATTGTTATCTTGTGTCA+TGG | 0.497471 | 2.1:-48324167 | MS.gene85627:CDS |
| CGACAAGGGTACCGCTAGCT+AGG | 0.499897 | 2.1:-48319190 | None:intergenic |
| TACTATGTCCGACAATTGCA+CGG | 0.515999 | 2.1:+48321407 | None:intergenic |
| AGTTGTTATCAGTTTCATCA+AGG | 0.520276 | 2.1:-48319226 | MS.gene85627:CDS |
| TTATTTGGAAAGAATTAGGA+AGG | 0.526480 | 2.1:-48320836 | MS.gene85627:CDS |
| ATTGATGTGAAGAACAGCTC+TGG | 0.527910 | 2.1:-48320805 | MS.gene85627:intron |
| TAATCAATGGACAGAGGTGG+AGG | 0.546091 | 2.1:-48321476 | MS.gene85627:CDS |
| TGCATTCTCTGTCAATCTGA+AGG | 0.554266 | 2.1:+48320278 | None:intergenic |
| AGAGGCATTGAAGAACTCCT+TGG | 0.556053 | 2.1:-48320865 | MS.gene85627:CDS |
| ATAACAGAAACTTACATAGG+AGG | 0.560003 | 2.1:+48324355 | None:intergenic |
| TAACAGAAACTTACATAGGA+GGG | 0.562085 | 2.1:+48324356 | None:intergenic |
| GCAATTGTCGGACATAGTAA+AGG | 0.572902 | 2.1:-48321403 | MS.gene85627:intron |
| TTTCCAAATAATCTTTACCA+AGG | 0.575597 | 2.1:+48320848 | None:intergenic |
| TTGGACGGTGTTAATTTCGT+CGG | 0.579627 | 2.1:+48319347 | None:intergenic |
| TTCAGATTGACAGAGAATGC+AGG | 0.596840 | 2.1:-48320276 | MS.gene85627:intron |
| CACAAGTTGCATATCACTGA+AGG | 0.610229 | 2.1:-48319291 | MS.gene85627:CDS |
| AGCTAGCGGTACCCTTGTCG+TGG | 0.635781 | 2.1:+48319193 | None:intergenic |
| GGAAACCATTGACCACGACA+AGG | 0.643377 | 2.1:-48319205 | MS.gene85627:CDS |
| AAACTCGTGTGCATCTTGGA+CGG | 0.651312 | 2.1:+48319332 | None:intergenic |
| GAAACCATTGACCACGACAA+GGG | 0.658212 | 2.1:-48319204 | MS.gene85627:CDS |
| TGGTAATCAATGGACAGAGG+TGG | 0.661992 | 2.1:-48321479 | MS.gene85627:CDS |
| GATGAAACTGATAACAACTG+AGG | 0.664817 | 2.1:+48319230 | None:intergenic |
| TCAAACTTTCCTCAGTAACA+CGG | 0.667092 | 2.1:+48320335 | None:intergenic |
| GTGTTAACAGGCCTAGCTAG+CGG | 0.670487 | 2.1:+48319179 | None:intergenic |
| GTTTGGTAATCAATGGACAG+AGG | 0.672141 | 2.1:-48321482 | MS.gene85627:CDS |
| CATTTCCAGAAAAGTCAAAG+CGG | 0.718998 | 2.1:+48323963 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAGTTTATACTAAAATT+TGG | - | chr2.1:48322967-48322986 | MS.gene85627:intron | 10.0% |
| !! | TATGTTCTTAATTTCTTAAT+GGG | + | chr2.1:48321631-48321650 | None:intergenic | 15.0% |
| !!! | TCTATATTTTTTACTTTCTT+AGG | - | chr2.1:48320396-48320415 | MS.gene85627:intron | 15.0% |
| !! | AAAATTCCTTTATATGTAGT+AGG | + | chr2.1:48323666-48323685 | None:intergenic | 20.0% |
| !! | AAACTTTATTACATGTAACT+CGG | + | chr2.1:48321985-48322004 | None:intergenic | 20.0% |
| !! | AAGATTATTTGGAAAGAATT+AGG | - | chr2.1:48322711-48322730 | MS.gene85627:intron | 20.0% |
| !! | ACAAATTTGCATACTAAAAT+GGG | + | chr2.1:48323992-48324011 | None:intergenic | 20.0% |
| !! | ACAATGATAAAACTATTTGA+TGG | + | chr2.1:48322807-48322826 | None:intergenic | 20.0% |
| !! | ACAATTCTTGAAGTAAAATT+CGG | - | chr2.1:48321575-48321594 | MS.gene85627:intron | 20.0% |
| !! | ACGAAATAGTGTTTATTAAA+TGG | + | chr2.1:48321180-48321199 | None:intergenic | 20.0% |
| !! | CTAATATTGATATGAAAAGT+CGG | - | chr2.1:48320621-48320640 | MS.gene85627:intron | 20.0% |
| !! | CTAATTTCATACTATAACTT+TGG | + | chr2.1:48322287-48322306 | None:intergenic | 20.0% |
| !! | GTATGTTCTTAATTTCTTAA+TGG | + | chr2.1:48321632-48321651 | None:intergenic | 20.0% |
| !! | TAATATTGATATGAAAAGTC+GGG | - | chr2.1:48320622-48320641 | MS.gene85627:intron | 20.0% |
| !! | TCTATTAATTCAAGAAGAAT+TGG | - | chr2.1:48320809-48320828 | MS.gene85627:CDS | 20.0% |
| !! | TTAGCATTATATATGAACAT+AGG | - | chr2.1:48322407-48322426 | MS.gene85627:intron | 20.0% |
| !! | TTCAAAGTAATTCTTAGAAT+TGG | - | chr2.1:48323512-48323531 | MS.gene85627:intron | 20.0% |
| !! | TTGTCTATATCATTAATCTT+GGG | - | chr2.1:48322013-48322032 | MS.gene85627:intron | 20.0% |
| !!! | AATTATTTTTCCTAAGATTG+TGG | + | chr2.1:48321011-48321030 | None:intergenic | 20.0% |
| !!! | TGATTGATCACAATTATTTT+GGG | + | chr2.1:48319631-48319650 | None:intergenic | 20.0% |
| !!! | TTAATAGTCTCCTAAAATTT+TGG | + | chr2.1:48321045-48321064 | None:intergenic | 20.0% |
| !!! | TTGATTGATCACAATTATTT+TGG | + | chr2.1:48319632-48319651 | None:intergenic | 20.0% |
| !!! | TTTATACTAAAATTTGGAAC+CGG | - | chr2.1:48322973-48322992 | MS.gene85627:intron | 20.0% |
| !!! | TTTGCTTAATTTGTTTAGTT+TGG | - | chr2.1:48320231-48320250 | MS.gene85627:intron | 20.0% |
| !!! | TTTTACTATTATGGTTTAGA+TGG | - | chr2.1:48319680-48319699 | MS.gene85627:intron | 20.0% |
| ! | AAACAATCACAGTTATAAGT+TGG | + | chr2.1:48321737-48321756 | None:intergenic | 25.0% |
| ! | AAATAATGAACTTCTTGTCT+TGG | - | chr2.1:48321929-48321948 | MS.gene85627:intron | 25.0% |
| ! | AACTCTAGATATATTTCAAC+GGG | - | chr2.1:48323084-48323103 | MS.gene85627:intron | 25.0% |
| ! | AGGAGACTATTAAGTTTATA+AGG | - | chr2.1:48321052-48321071 | MS.gene85627:intron | 25.0% |
| ! | ATAATCATCAAGTTCATCTA+TGG | + | chr2.1:48322350-48322369 | None:intergenic | 25.0% |
| ! | ATAGTAATTGTATTCATCAG+AGG | + | chr2.1:48319777-48319796 | None:intergenic | 25.0% |
| ! | ATATCAATATTAGTTCCATC+AGG | + | chr2.1:48320614-48320633 | None:intergenic | 25.0% |
| ! | ATGTTAGATTACATCCTATA+TGG | - | chr2.1:48324155-48324174 | MS.gene85627:CDS | 25.0% |
| ! | ATGTTGCTACAAATGATATA+TGG | - | chr2.1:48324069-48324088 | MS.gene85627:intron | 25.0% |
| ! | CAAATTTGTCTACAAAATCA+TGG | - | chr2.1:48324003-48324022 | MS.gene85627:CDS | 25.0% |
| ! | CAACTCTAGATATATTTCAA+CGG | - | chr2.1:48323083-48323102 | MS.gene85627:intron | 25.0% |
| ! | CAATGAGTGATTGTATAAAT+TGG | + | chr2.1:48322209-48322228 | None:intergenic | 25.0% |
| ! | CTTGTCTATATCATTAATCT+TGG | - | chr2.1:48322012-48322031 | MS.gene85627:intron | 25.0% |
| ! | GAATGAATCAACAACAATAT+CGG | + | chr2.1:48321249-48321268 | None:intergenic | 25.0% |
| ! | GACAAATTTGCATACTAAAA+TGG | + | chr2.1:48323993-48324012 | None:intergenic | 25.0% |
| ! | GATTAAATAAGCCTAAGTAA+AGG | + | chr2.1:48322777-48322796 | None:intergenic | 25.0% |
| ! | GGAGACTATTAAGTTTATAA+GGG | - | chr2.1:48321053-48321072 | MS.gene85627:intron | 25.0% |
| ! | GTGATAATACACAACAAAAA+CGG | - | chr2.1:48319315-48319334 | MS.gene85627:CDS | 25.0% |
| ! | TAGAGTAAAATAGAGAAGTT+GGG | - | chr2.1:48319914-48319933 | MS.gene85627:intron | 25.0% |
| ! | TAGTAATTGTATTCATCAGA+GGG | + | chr2.1:48319776-48319795 | None:intergenic | 25.0% |
| ! | TCAATAACAGAAACTTACAT+AGG | + | chr2.1:48319202-48319221 | None:intergenic | 25.0% |
| ! | TCACAAATTGGACTTAATAA+TGG | + | chr2.1:48323392-48323411 | None:intergenic | 25.0% |
| ! | TGAAAAAACCTACTCTAATT+GGG | - | chr2.1:48322434-48322453 | MS.gene85627:intron | 25.0% |
| ! | TGAATCAAATTGTTTGATAC+AGG | + | chr2.1:48320553-48320572 | None:intergenic | 25.0% |
| ! | TGCATGCATTAAAGTAAAAA+AGG | + | chr2.1:48319440-48319459 | None:intergenic | 25.0% |
| ! | TTAGAGTAAAATAGAGAAGT+TGG | - | chr2.1:48319913-48319932 | MS.gene85627:intron | 25.0% |
| ! | TTATAGAATTCAAGCATGAA+GGG | + | chr2.1:48323823-48323842 | None:intergenic | 25.0% |
| ! | TTATTTGGAAAGAATTAGGA+AGG | - | chr2.1:48322715-48322734 | MS.gene85627:intron | 25.0% |
| ! | TTCATACTATAACTTTGGAT+AGG | + | chr2.1:48322282-48322301 | None:intergenic | 25.0% |
| ! | TTGAACATAATCACGTAAAT+CGG | - | chr2.1:48322904-48322923 | MS.gene85627:intron | 25.0% |
| ! | TTGAACATTCTTTCACAAAT+TGG | + | chr2.1:48323404-48323423 | None:intergenic | 25.0% |
| ! | TTTCCAAATAATCTTTACCA+AGG | + | chr2.1:48322706-48322725 | None:intergenic | 25.0% |
| !! | ACTTATAACTGTGATTGTTT+TGG | - | chr2.1:48321737-48321756 | MS.gene85627:intron | 25.0% |
| !! | ACTTTGTTTAGAATGAAGTT+AGG | - | chr2.1:48320654-48320673 | MS.gene85627:intron | 25.0% |
| !! | CATTTAAGTTTGGTAATCAA+TGG | - | chr2.1:48322062-48322081 | MS.gene85627:intron | 25.0% |
| !! | CTACATATAAAGGAATTTTG+AGG | - | chr2.1:48323667-48323686 | MS.gene85627:intron | 25.0% |
| !! | GTATATTCTAGATTTGTTCT+AGG | - | chr2.1:48320203-48320222 | MS.gene85627:intron | 25.0% |
| !! | TATCATTTCTGAAAACCAAT+TGG | + | chr2.1:48321484-48321503 | None:intergenic | 25.0% |
| !! | TTATACTAAAATTTGGAACC+GGG | - | chr2.1:48322974-48322993 | MS.gene85627:intron | 25.0% |
| !!! | AACTTCTACTTGTTGTTAAT+AGG | - | chr2.1:48320704-48320723 | MS.gene85627:intron | 25.0% |
| !!! | ATATGTCTATGTTTTGAGTT+TGG | - | chr2.1:48321799-48321818 | MS.gene85627:intron | 25.0% |
| !!! | ATTGTTGTTGATTCATTCAT+TGG | - | chr2.1:48321251-48321270 | MS.gene85627:intron | 25.0% |
| !!! | CAAACTTGTTGTTTAAAGAT+TGG | - | chr2.1:48320735-48320754 | MS.gene85627:intron | 25.0% |
| !!! | CTTTTAGCTAATTATCTAGT+AGG | + | chr2.1:48320314-48320333 | None:intergenic | 25.0% |
| !!! | GAAATTGTCTCTGAAATTTT+TGG | - | chr2.1:48319805-48319824 | MS.gene85627:intron | 25.0% |
| !!! | TTACTTTTTTTTCCCTATGT+AGG | - | chr2.1:48319507-48319526 | MS.gene85627:intron | 25.0% |
| AAAAACGGTGAAAAACTTGT+TGG | - | chr2.1:48319330-48319349 | MS.gene85627:CDS | 30.0% | |
| AAAATCATGGTGTAGTTCTT+TGG | - | chr2.1:48324016-48324035 | MS.gene85627:CDS | 30.0% | |
| AACTCTGATCAAATGAGAAA+AGG | - | chr2.1:48323883-48323902 | MS.gene85627:intron | 30.0% | |
| ACACAAGATAACAATGTCTT+TGG | + | chr2.1:48319382-48319401 | None:intergenic | 30.0% | |
| ACACATGAAATTTGAGAAGA+AGG | + | chr2.1:48322521-48322540 | None:intergenic | 30.0% | |
| ACTCCTTGGTAAAGATTATT+TGG | - | chr2.1:48322700-48322719 | MS.gene85627:intron | 30.0% | |
| AGAGTAAAATAGAGAAGTTG+GGG | - | chr2.1:48319915-48319934 | MS.gene85627:intron | 30.0% | |
| AGATAATTAGCTAAAAGCTG+AGG | - | chr2.1:48320317-48320336 | MS.gene85627:CDS | 30.0% | |
| AGTAATTGTATTCATCAGAG+GGG | + | chr2.1:48319775-48319794 | None:intergenic | 30.0% | |
| AGTTGTTATCAGTTTCATCA+AGG | - | chr2.1:48324325-48324344 | MS.gene85627:intron | 30.0% | |
| ATAACAGAAACTTACATAGG+AGG | + | chr2.1:48319199-48319218 | None:intergenic | 30.0% | |
| ATTCAGAAAACACAATCGAA+AGG | - | chr2.1:48320568-48320587 | MS.gene85627:intron | 30.0% | |
| CAAAGAATGACTAATAAGAG+TGG | - | chr2.1:48320775-48320794 | MS.gene85627:intron | 30.0% | |
| CAATTCATACTTTGCAATTG+TGG | + | chr2.1:48321691-48321710 | None:intergenic | 30.0% | |
| CACAATTGCAAAGTATGAAT+TGG | - | chr2.1:48321689-48321708 | MS.gene85627:intron | 30.0% | |
| CCAATATTGTTTATCCAGTT+AGG | + | chr2.1:48320119-48320138 | None:intergenic | 30.0% | |
| CCTAACTGGATAAACAATAT+TGG | - | chr2.1:48320116-48320135 | MS.gene85627:intron | 30.0% | |
| CTAATCAACCATTACAAAAC+CGG | - | chr2.1:48323623-48323642 | MS.gene85627:intron | 30.0% | |
| CTTATAGAATTCAAGCATGA+AGG | + | chr2.1:48323824-48323843 | None:intergenic | 30.0% | |
| CTTCTTGAATTAATAGATCC+AGG | + | chr2.1:48320806-48320825 | None:intergenic | 30.0% | |
| GGTCAGCATAATTTGAATTA+GGG | - | chr2.1:48319890-48319909 | MS.gene85627:intron | 30.0% | |
| GTGAAAAAACCTACTCTAAT+TGG | - | chr2.1:48322433-48322452 | MS.gene85627:intron | 30.0% | |
| GTTAAATGAATACACATTCC+TGG | + | chr2.1:48322240-48322259 | None:intergenic | 30.0% | |
| TAACAGAAACTTACATAGGA+GGG | + | chr2.1:48319198-48319217 | None:intergenic | 30.0% | |
| TGGTCAGCATAATTTGAATT+AGG | - | chr2.1:48319889-48319908 | MS.gene85627:intron | 30.0% | |
| TGTCTTTGAATTGATTGTGT+GGG | - | chr2.1:48320168-48320187 | MS.gene85627:intron | 30.0% | |
| TTGAGAACATATATTGTTGC+AGG | - | chr2.1:48323181-48323200 | MS.gene85627:intron | 30.0% | |
| ! | AATCTTGGGTTTTTCTTCAA+GGG | - | chr2.1:48322027-48322046 | MS.gene85627:intron | 30.0% |
| ! | GTGACTTGAACCAAAATTTT+AGG | - | chr2.1:48321032-48321051 | MS.gene85627:intron | 30.0% |
| ! | TAATCTTGGGTTTTTCTTCA+AGG | - | chr2.1:48322026-48322045 | MS.gene85627:intron | 30.0% |
| ! | TATACTAAAATTTGGAACCG+GGG | - | chr2.1:48322975-48322994 | MS.gene85627:intron | 30.0% |
| ! | TTGTCTTGGTGTAAATTAAG+CGG | - | chr2.1:48321943-48321962 | MS.gene85627:intron | 30.0% |
| !! | AATCAGTGTTTTTCAGTTTC+TGG | - | chr2.1:48319869-48319888 | MS.gene85627:intron | 30.0% |
| !! | CTTGTTGTTTAAAGATTGGT+AGG | - | chr2.1:48320739-48320758 | MS.gene85627:intron | 30.0% |
| !! | TACCAGTAAGTAACTTGTTA+AGG | + | chr2.1:48324116-48324135 | None:intergenic | 30.0% |
| !!! | TATGTTTTGAGTTTGGACAT+AGG | - | chr2.1:48321806-48321825 | MS.gene85627:intron | 30.0% |
| !!! | TGATCACAATTATTTTGGGA+CGG | + | chr2.1:48319627-48319646 | None:intergenic | 30.0% |
| AAGGGACATGATAGAAACTA+TGG | - | chr2.1:48319999-48320018 | MS.gene85627:intron | 35.0% | |
| AATCATCCTAGCAAACTTTG+GGG | + | chr2.1:48322550-48322569 | None:intergenic | 35.0% | |
| AGAAAACTCAGATTCCAAGA+TGG | + | chr2.1:48323605-48323624 | None:intergenic | 35.0% | |
| AGAACTGCTTTCTTTAGTCT+TGG | - | chr2.1:48321289-48321308 | MS.gene85627:intron | 35.0% | |
| AGAATGACTAATAAGAGTGG+TGG | - | chr2.1:48320778-48320797 | MS.gene85627:intron | 35.0% | |
| AGATTACATCCTATATGGCA+GGG | - | chr2.1:48324160-48324179 | MS.gene85627:CDS | 35.0% | |
| ATAACTTTGGATAGGCAATG+AGG | + | chr2.1:48322274-48322293 | None:intergenic | 35.0% | |
| ATTTACTCCCTAATCAAGTG+AGG | - | chr2.1:48323962-48323981 | MS.gene85627:CDS | 35.0% | |
| CAAGTAGAAGTTTCAGATGT+AGG | + | chr2.1:48320696-48320715 | None:intergenic | 35.0% | |
| CAATCATCCTAGCAAACTTT+GGG | + | chr2.1:48322551-48322570 | None:intergenic | 35.0% | |
| CATTTCCAGAAAAGTCAAAG+CGG | + | chr2.1:48319591-48319610 | None:intergenic | 35.0% | |
| CTCTGGTAAATCCTTTACTT+AGG | - | chr2.1:48322763-48322782 | MS.gene85627:intron | 35.0% | |
| CTGATAGAAACACAGGAATT+AGG | + | chr2.1:48321205-48321224 | None:intergenic | 35.0% | |
| CTGTCTTTGAATTGATTGTG+TGG | - | chr2.1:48320167-48320186 | MS.gene85627:intron | 35.0% | |
| GACAAATGCTATAAGCTTGA+TGG | + | chr2.1:48321359-48321378 | None:intergenic | 35.0% | |
| GACAGTGATAAAAAGAGAAG+AGG | + | chr2.1:48320152-48320171 | None:intergenic | 35.0% | |
| GACATTGTTATCTTGTGTCA+TGG | - | chr2.1:48319384-48319403 | MS.gene85627:intron | 35.0% | |
| GACCTTAACAAGTTACTTAC+TGG | - | chr2.1:48324111-48324130 | MS.gene85627:intron | 35.0% | |
| GATGAAACTGATAACAACTG+AGG | + | chr2.1:48324324-48324343 | None:intergenic | 35.0% | |
| GCTAGAACTCAATTCATAGA+GGG | - | chr2.1:48321549-48321568 | MS.gene85627:intron | 35.0% | |
| GCTGAGGAATATAGCAAAAA+TGG | - | chr2.1:48320333-48320352 | MS.gene85627:CDS | 35.0% | |
| GGATTACACGATTTGATTCA+CGG | + | chr2.1:48322126-48322145 | None:intergenic | 35.0% | |
| GGCATATTACATGAATGTTC+TGG | - | chr2.1:48319351-48319370 | MS.gene85627:CDS | 35.0% | |
| GTAAGATAAATCAGAGCCTA+AGG | + | chr2.1:48321127-48321146 | None:intergenic | 35.0% | |
| GTGAATTCAAACAAGACAAG+TGG | + | chr2.1:48320275-48320294 | None:intergenic | 35.0% | |
| TAGATTACATCCTATATGGC+AGG | - | chr2.1:48324159-48324178 | MS.gene85627:CDS | 35.0% | |
| TCAAACTTTCCTCAGTAACA+CGG | + | chr2.1:48323219-48323238 | None:intergenic | 35.0% | |
| TCACTCATTGAAGAAAAACC+AGG | - | chr2.1:48322219-48322238 | MS.gene85627:intron | 35.0% | |
| TCTAGAAATCATGCTTGTGT+GGG | + | chr2.1:48320952-48320971 | None:intergenic | 35.0% | |
| TGCAGAAGAAACAGTTACAT+CGG | + | chr2.1:48321902-48321921 | None:intergenic | 35.0% | |
| TGCTAGAACTCAATTCATAG+AGG | - | chr2.1:48321548-48321567 | MS.gene85627:intron | 35.0% | |
| TGTAACTCTCTTGAGAGAAA+GGG | - | chr2.1:48319981-48320000 | MS.gene85627:intron | 35.0% | |
| TGTTACTGAGGAAAGTTTGA+TGG | - | chr2.1:48323219-48323238 | MS.gene85627:intron | 35.0% | |
| TTCATACTTTGCAATTGTGG+TGG | + | chr2.1:48321688-48321707 | None:intergenic | 35.0% | |
| TTGGAAAGAATTAGGAAGGA+AGG | - | chr2.1:48322719-48322738 | MS.gene85627:intron | 35.0% | |
| TTGTAACTCTCTTGAGAGAA+AGG | - | chr2.1:48319980-48319999 | MS.gene85627:intron | 35.0% | |
| TTTACCAATGTCAACGTGTT+TGG | + | chr2.1:48322865-48322884 | None:intergenic | 35.0% | |
| TTTACTCCCTAATCAAGTGA+GGG | - | chr2.1:48323963-48323982 | MS.gene85627:CDS | 35.0% | |
| ! | AGCGAAGGTTCATTTAAGTT+TGG | - | chr2.1:48322052-48322071 | MS.gene85627:intron | 35.0% |
| ! | AGTTTTCACGTCGTGATATT+TGG | + | chr2.1:48322633-48322652 | None:intergenic | 35.0% |
| ! | ATTTCTGAAAACCAATTGGC+AGG | + | chr2.1:48321480-48321499 | None:intergenic | 35.0% |
| ! | CAAAGCTTTAGTCATGTTAC+AGG | + | chr2.1:48321601-48321620 | None:intergenic | 35.0% |
| ! | CACAAGCATGATTTCTAGAA+AGG | - | chr2.1:48320953-48320972 | MS.gene85627:intron | 35.0% |
| ! | CTTGCAAAAATTAGCTTCGA+GGG | + | chr2.1:48320040-48320059 | None:intergenic | 35.0% |
| ! | TCTTGCAAAAATTAGCTTCG+AGG | + | chr2.1:48320041-48320060 | None:intergenic | 35.0% |
| ! | TCTTTTCCAATTCAACAGCA+AGG | + | chr2.1:48319552-48319571 | None:intergenic | 35.0% |
| ! | TTCTAGAAATCATGCTTGTG+TGG | + | chr2.1:48320953-48320972 | None:intergenic | 35.0% |
| !! | ACTCTCAATCAAAAGTGTCA+AGG | + | chr2.1:48320458-48320477 | None:intergenic | 35.0% |
| !! | ATTGAACCTTGCTGTTGAAT+TGG | - | chr2.1:48319543-48319562 | MS.gene85627:intron | 35.0% |
| !! | GCTTTGACTTTTCTGGAAAT+GGG | - | chr2.1:48319590-48319609 | MS.gene85627:intron | 35.0% |
| !! | GTTCTTGATAGTTGACTTGT+GGG | - | chr2.1:48322478-48322497 | MS.gene85627:intron | 35.0% |
| !! | GTTGATAATAGCTGCATGAT+TGG | - | chr2.1:48321764-48321783 | MS.gene85627:intron | 35.0% |
| !! | TGTTCTTGATAGTTGACTTG+TGG | - | chr2.1:48322477-48322496 | MS.gene85627:intron | 35.0% |
| !! | TTCTTGATAGTTGACTTGTG+GGG | - | chr2.1:48322479-48322498 | MS.gene85627:intron | 35.0% |
| !! | TTTTGATTACCGTGTTACTG+AGG | - | chr2.1:48323207-48323226 | MS.gene85627:intron | 35.0% |
| !!! | TTTTGAGTTTGGACATAGGA+TGG | - | chr2.1:48321810-48321829 | MS.gene85627:intron | 35.0% |
| AAAACTGTTGTCAACGTCTC+TGG | - | chr2.1:48322647-48322666 | MS.gene85627:intron | 40.0% | |
| AAATCATGCTTGTGTGGGTT+AGG | + | chr2.1:48320947-48320966 | None:intergenic | 40.0% | |
| AAGCACTACTGATACAGACA+CGG | - | chr2.1:48322836-48322855 | MS.gene85627:intron | 40.0% | |
| AGACCACAGTGAGAAAACAT+TGG | - | chr2.1:48321396-48321415 | MS.gene85627:intron | 40.0% | |
| ATAAACACATGCAGAACGCA+AGG | + | chr2.1:48322951-48322970 | None:intergenic | 40.0% | |
| ATCAGAGGGGTTAAAGATCA+TGG | + | chr2.1:48319762-48319781 | None:intergenic | 40.0% | |
| ATCATCCTAGCAAACTTTGG+GGG | + | chr2.1:48322549-48322568 | None:intergenic | 40.0% | |
| ATCATTAAGCACCAACTCTC+TGG | - | chr2.1:48321095-48321114 | MS.gene85627:intron | 40.0% | |
| ATGAGATCAGTGTCCTACAT+AGG | + | chr2.1:48319523-48319542 | None:intergenic | 40.0% | |
| ATTGATGTGAAGAACAGCTC+TGG | - | chr2.1:48322746-48322765 | MS.gene85627:intron | 40.0% | |
| ATTGCTCTTGGTGAGCAATA+GGG | - | chr2.1:48319938-48319957 | MS.gene85627:intron | 40.0% | |
| CACAAGTTGCATATCACTGA+AGG | - | chr2.1:48324260-48324279 | MS.gene85627:intron | 40.0% | |
| CATCAAGTTCATCTATGGCA+TGG | + | chr2.1:48322345-48322364 | None:intergenic | 40.0% | |
| CCAATCATCCTAGCAAACTT+TGG | + | chr2.1:48322552-48322571 | None:intergenic | 40.0% | |
| CCACAACTTGAATCTTCTTG+TGG | - | chr2.1:48321321-48321340 | MS.gene85627:intron | 40.0% | |
| CTCAGATTCCAAGATGGTAT+CGG | + | chr2.1:48323599-48323618 | None:intergenic | 40.0% | |
| CTGTATCAGTAGTGCTTCAT+AGG | + | chr2.1:48322833-48322852 | None:intergenic | 40.0% | |
| CTTCAGTGATATGCAACTTG+TGG | + | chr2.1:48324262-48324281 | None:intergenic | 40.0% | |
| GAAACTAAAGCAACCATGTC+AGG | + | chr2.1:48321880-48321899 | None:intergenic | 40.0% | |
| GATTAACTCCGATACCATCT+TGG | - | chr2.1:48323588-48323607 | MS.gene85627:intron | 40.0% | |
| GCAATTGTCGGACATAGTAA+AGG | - | chr2.1:48322148-48322167 | MS.gene85627:intron | 40.0% | |
| GGGATGCCTACTACATATAA+AGG | - | chr2.1:48323657-48323676 | MS.gene85627:intron | 40.0% | |
| GTGATATGCAACTTGTGGTT+TGG | + | chr2.1:48324257-48324276 | None:intergenic | 40.0% | |
| TAATTGAGAGAGAGAGAGAG+AGG | + | chr2.1:48323358-48323377 | None:intergenic | 40.0% | |
| TACTATGTCCGACAATTGCA+CGG | + | chr2.1:48322147-48322166 | None:intergenic | 40.0% | |
| TAGAAAGGAGTAGAAGCTGA+GGG | - | chr2.1:48320968-48320987 | MS.gene85627:intron | 40.0% | |
| TAGGTCAATTTGAGCCTAAC+TGG | - | chr2.1:48320102-48320121 | MS.gene85627:intron | 40.0% | |
| TCTAGCACTACTTCAACAAG+AGG | + | chr2.1:48321535-48321554 | None:intergenic | 40.0% | |
| TCTCTCTTTCTTGATAGAGG+TGG | - | chr2.1:48321419-48321438 | MS.gene85627:CDS | 40.0% | |
| TCTTCAGCTGATAGAAACAC+AGG | + | chr2.1:48321212-48321231 | None:intergenic | 40.0% | |
| TGAGATCAGTGTCCTACATA+GGG | + | chr2.1:48319522-48319541 | None:intergenic | 40.0% | |
| TGCATTCTCTGTCAATCTGA+AGG | + | chr2.1:48323276-48323295 | None:intergenic | 40.0% | |
| TGCTTGTAATTGTGTATCCC+CGG | + | chr2.1:48322995-48323014 | None:intergenic | 40.0% | |
| TGGTCTCTCTTTCTTGATAG+AGG | - | chr2.1:48321416-48321435 | MS.gene85627:CDS | 40.0% | |
| TTACTCCCTAATCAAGTGAG+GGG | - | chr2.1:48323964-48323983 | MS.gene85627:CDS | 40.0% | |
| TTATCCACTATCGAGCAACT+CGG | + | chr2.1:48323554-48323573 | None:intergenic | 40.0% | |
| TTCAGATTGACAGAGAATGC+AGG | - | chr2.1:48323275-48323294 | MS.gene85627:intron | 40.0% | |
| ! | AGACCAATGTTTTCTCACTG+TGG | + | chr2.1:48321402-48321421 | None:intergenic | 40.0% |
| ! | GTTTGGTAATCAATGGACAG+AGG | - | chr2.1:48322069-48322088 | MS.gene85627:intron | 40.0% |
| ! | TCTTTGGAGAAGAGATGTGA+AGG | - | chr2.1:48324032-48324051 | MS.gene85627:intron | 40.0% |
| ! | TTGGACGGTGTTAATTTCGT+CGG | + | chr2.1:48324207-48324226 | None:intergenic | 40.0% |
| ! | TTTTCTCACTGTGGTCTAGT+CGG | + | chr2.1:48321393-48321412 | None:intergenic | 40.0% |
| ! | TTTTCTTCAAGGGAAAGCGA+AGG | - | chr2.1:48322037-48322056 | MS.gene85627:intron | 40.0% |
| !! | AAATCGGTATCGACACATGT+TGG | - | chr2.1:48322920-48322939 | MS.gene85627:intron | 40.0% |
| !! | CCAAAGTTTGCTAGGATGAT+TGG | - | chr2.1:48322549-48322568 | MS.gene85627:intron | 40.0% |
| !! | CCACAAGAAGATTCAAGTTG+TGG | + | chr2.1:48321324-48321343 | None:intergenic | 40.0% |
| !! | CGCTTTGACTTTTCTGGAAA+TGG | - | chr2.1:48319589-48319608 | MS.gene85627:intron | 40.0% |
| !! | TCTATGGCATGGTTTTGCAA+AGG | + | chr2.1:48322334-48322353 | None:intergenic | 40.0% |
| !! | TCTTGATAGTTGACTTGTGG+GGG | - | chr2.1:48322480-48322499 | MS.gene85627:intron | 40.0% |
| !! | TCTTTCCGCTTTGACTTTTC+TGG | - | chr2.1:48319583-48319602 | MS.gene85627:intron | 40.0% |
| AAACTCGTGTGCATCTTGGA+CGG | + | chr2.1:48324222-48324241 | None:intergenic | 45.0% | |
| AATTGTTTGTGCCCTGATGC+AGG | - | chr2.1:48322581-48322600 | MS.gene85627:intron | 45.0% | |
| ACTAAAGCAACCATGTCAGG+CGG | + | chr2.1:48321877-48321896 | None:intergenic | 45.0% | |
| ACTGAACAGTACCTGCCAAT+TGG | - | chr2.1:48321466-48321485 | MS.gene85627:CDS | 45.0% | |
| ACTGTTCAGTCTTCTCAGCA+AGG | + | chr2.1:48321456-48321475 | None:intergenic | 45.0% | |
| ACTTGAATCTTCTTGTGGCC+TGG | - | chr2.1:48321326-48321345 | MS.gene85627:intron | 45.0% | |
| AGGCTGTATCTCATTCGATG+TGG | - | chr2.1:48323687-48323706 | MS.gene85627:intron | 45.0% | |
| ATATGACACCGTGGTCCAAT+AGG | - | chr2.1:48320912-48320931 | MS.gene85627:CDS | 45.0% | |
| ATGTCGCAAGAACGGATAGT+GGG | + | chr2.1:48320484-48320503 | None:intergenic | 45.0% | |
| ATGTGAGAGTAGAGACCTGA+TGG | - | chr2.1:48320596-48320615 | MS.gene85627:intron | 45.0% | |
| ATTGTCGCATGTCGCAAGAA+CGG | + | chr2.1:48320492-48320511 | None:intergenic | 45.0% | |
| CAGTGACACCCAATTAGAGT+AGG | + | chr2.1:48322445-48322464 | None:intergenic | 45.0% | |
| CCATCAATCCTATTGGACCA+CGG | + | chr2.1:48320923-48320942 | None:intergenic | 45.0% | |
| CGGAAGAACCGTGAATTGTA+AGG | + | chr2.1:48324187-48324206 | None:intergenic | 45.0% | |
| CGTGGTCCAATAGGATTGAT+GGG | - | chr2.1:48320921-48320940 | MS.gene85627:CDS | 45.0% | |
| CGTGTAATCCGTGCAATTGT+CGG | - | chr2.1:48322136-48322155 | MS.gene85627:intron | 45.0% | |
| CTAGAAAGGAGTAGAAGCTG+AGG | - | chr2.1:48320967-48320986 | MS.gene85627:intron | 45.0% | |
| CTATGTTACCTCCTGCATCA+GGG | + | chr2.1:48322595-48322614 | None:intergenic | 45.0% | |
| GAAACCATTGACCACGACAA+GGG | - | chr2.1:48324347-48324366 | MS.gene85627:intron | 45.0% | |
| GACACCAAACACGTTGACAT+TGG | - | chr2.1:48322858-48322877 | MS.gene85627:intron | 45.0% | |
| GATGTAGGTACTATCACTGC+AGG | + | chr2.1:48320681-48320700 | None:intergenic | 45.0% | |
| GATTGCTCTTGGTGAGCAAT+AGG | - | chr2.1:48319937-48319956 | MS.gene85627:intron | 45.0% | |
| GCAGTGAATCGAGTGAATCT+TGG | + | chr2.1:48320873-48320892 | None:intergenic | 45.0% | |
| GGCTGTATCTCATTCGATGT+GGG | - | chr2.1:48323688-48323707 | MS.gene85627:intron | 45.0% | |
| GTTAGGCCCATCAATCCTAT+TGG | + | chr2.1:48320930-48320949 | None:intergenic | 45.0% | |
| TAATCAATGGACAGAGGTGG+AGG | - | chr2.1:48322075-48322094 | MS.gene85627:intron | 45.0% | |
| TACTCCCTAATCAAGTGAGG+GGG | - | chr2.1:48323965-48323984 | MS.gene85627:CDS | 45.0% | |
| TAGCAAACTCGTGTGCATCT+TGG | + | chr2.1:48324226-48324245 | None:intergenic | 45.0% | |
| TATCCACTATCGAGCAACTC+GGG | + | chr2.1:48323553-48323572 | None:intergenic | 45.0% | |
| TGACAGAGAATGCAGGTTAG+AGG | - | chr2.1:48323282-48323301 | MS.gene85627:intron | 45.0% | |
| TGGTAATCAATGGACAGAGG+TGG | - | chr2.1:48322072-48322091 | MS.gene85627:intron | 45.0% | |
| TTAAGCACCAACTCTCTGGT+AGG | - | chr2.1:48321099-48321118 | MS.gene85627:intron | 45.0% | |
| TTGCTCTTGGTGAGCAATAG+GGG | - | chr2.1:48319939-48319958 | MS.gene85627:intron | 45.0% | |
| TTGTAAGGACCCTGCCATAT+AGG | + | chr2.1:48324172-48324191 | None:intergenic | 45.0% | |
| ! | AAGCTTGATGGTTATCCACC+AGG | + | chr2.1:48321347-48321366 | None:intergenic | 45.0% |
| !! | AGAGGCATTGAAGAACTCCT+TGG | - | chr2.1:48322686-48322705 | MS.gene85627:intron | 45.0% |
| !! | CACACAAGCCGGTTTTGTAA+TGG | + | chr2.1:48323634-48323653 | None:intergenic | 45.0% |
| !! | CTAATAAGAGTGGTGGATCC+TGG | - | chr2.1:48320785-48320804 | MS.gene85627:intron | 45.0% |
| !! | GGACGTTTTGATCTGAAGAG+AGG | - | chr2.1:48322668-48322687 | MS.gene85627:intron | 45.0% |
| !!! | AATTAATATTTTTACTATTA+TGG | - | chr2.1:48319671-48319690 | MS.gene85627:intron | 5.0% |
| !!! | TTTAGTTTTAAAAATTTATA+TGG | + | chr2.1:48323438-48323457 | None:intergenic | 5.0% |
| AACTCTCTGGTAGGAGCCTT+AGG | - | chr2.1:48321108-48321127 | MS.gene85627:intron | 50.0% | |
| AGAAGCTGAGGGAAGCTTTG+TGG | - | chr2.1:48320979-48320998 | MS.gene85627:intron | 50.0% | |
| CAGAACAACCACGACAGAGA+TGG | + | chr2.1:48320365-48320384 | None:intergenic | 50.0% | |
| CATGTCGCAAGAACGGATAG+TGG | + | chr2.1:48320485-48320504 | None:intergenic | 50.0% | |
| CCGTGGTCCAATAGGATTGA+TGG | - | chr2.1:48320920-48320939 | MS.gene85627:CDS | 50.0% | |
| CGACTGTTGATATGACACCG+TGG | - | chr2.1:48320903-48320922 | MS.gene85627:CDS | 50.0% | |
| CTCTGTCGTGGTTGTTCTGT+TGG | - | chr2.1:48320366-48320385 | MS.gene85627:intron | 50.0% | |
| GAGAAGTTGGGGATTGCTCT+TGG | - | chr2.1:48319926-48319945 | MS.gene85627:intron | 50.0% | |
| GCTATGTTACCTCCTGCATC+AGG | + | chr2.1:48322596-48322615 | None:intergenic | 50.0% | |
| GGAAACCATTGACCACGACA+AGG | - | chr2.1:48324346-48324365 | MS.gene85627:intron | 50.0% | |
| GGCAGGGTCCTTACAATTCA+CGG | - | chr2.1:48324176-48324195 | MS.gene85627:CDS | 50.0% | |
| GGCTCAAATTGACCTACGAC+TGG | + | chr2.1:48320098-48320117 | None:intergenic | 50.0% | |
| GTCGTGGTTGTTCTGTTGGA+AGG | - | chr2.1:48320370-48320389 | MS.gene85627:intron | 50.0% | |
| GTGGCTTGAGCCACAATCTT+AGG | - | chr2.1:48320998-48321017 | MS.gene85627:intron | 50.0% | |
| TAAGGCTCCTACCAGAGAGT+TGG | + | chr2.1:48321109-48321128 | None:intergenic | 50.0% | |
| TGAATCTTCTTGTGGCCTGG+TGG | - | chr2.1:48321329-48321348 | MS.gene85627:intron | 50.0% | |
| TGTCGCAAGAACGGATAGTG+GGG | + | chr2.1:48320483-48320502 | None:intergenic | 50.0% | |
| ! | CCTAGCAAACTTTGGGGGAA+AGG | + | chr2.1:48322544-48322563 | None:intergenic | 50.0% |
| ! | CCTTTCCCCCAAAGTTTGCT+AGG | - | chr2.1:48322541-48322560 | MS.gene85627:intron | 50.0% |
| GGACAAAGCCATCTCTGTCG+TGG | - | chr2.1:48320354-48320373 | MS.gene85627:intron | 55.0% | |
| GGGTCCCCCTCACTTGATTA+GGG | + | chr2.1:48323972-48323991 | None:intergenic | 55.0% | |
| GGTACCCTTGTCGTGGTCAA+TGG | + | chr2.1:48324354-48324373 | None:intergenic | 55.0% | |
| TGACCCGAGTTGCTCGATAG+TGG | - | chr2.1:48323547-48323566 | MS.gene85627:intron | 55.0% | |
| TGGGTCCCCCTCACTTGATT+AGG | + | chr2.1:48323973-48323992 | None:intergenic | 55.0% | |
| TGTTTGTGCCCTGATGCAGG+AGG | - | chr2.1:48322584-48322603 | MS.gene85627:intron | 55.0% | |
| ! | GTGTTTCTGACCGCCTGACA+TGG | - | chr2.1:48321864-48321883 | MS.gene85627:intron | 55.0% |
| !! | ACAAAACCGGCTTGTGTGCG+AGG | - | chr2.1:48323636-48323655 | MS.gene85627:intron | 55.0% |
| !! | CAAAACCGGCTTGTGTGCGA+GGG | - | chr2.1:48323637-48323656 | MS.gene85627:intron | 55.0% |
| AGCTAGCGGTACCCTTGTCG+TGG | + | chr2.1:48324361-48324380 | None:intergenic | 60.0% | |
| GAGCTGCTCTCTCCAGTCGT+AGG | - | chr2.1:48320083-48320102 | MS.gene85627:intron | 60.0% | |
| GGCATCCCTCGCACACAAGC+CGG | + | chr2.1:48323645-48323664 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 48319191 | 48324382 | 48319191 | ID=MS.gene85627 |
| chr2.1 | mRNA | 48319191 | 48324382 | 48319191 | ID=MS.gene85627.t1;Parent=MS.gene85627 |
| chr2.1 | exon | 48324370 | 48324382 | 48324370 | ID=MS.gene85627.t1.exon1;Parent=MS.gene85627.t1 |
| chr2.1 | CDS | 48324370 | 48324382 | 48324370 | ID=cds.MS.gene85627.t1;Parent=MS.gene85627.t1 |
| chr2.1 | exon | 48324151 | 48324278 | 48324151 | ID=MS.gene85627.t1.exon2;Parent=MS.gene85627.t1 |
| chr2.1 | CDS | 48324151 | 48324278 | 48324151 | ID=cds.MS.gene85627.t1;Parent=MS.gene85627.t1 |
| chr2.1 | exon | 48323962 | 48324044 | 48323962 | ID=MS.gene85627.t1.exon3;Parent=MS.gene85627.t1 |
| chr2.1 | CDS | 48323962 | 48324044 | 48323962 | ID=cds.MS.gene85627.t1;Parent=MS.gene85627.t1 |
| chr2.1 | exon | 48321404 | 48321525 | 48321404 | ID=MS.gene85627.t1.exon4;Parent=MS.gene85627.t1 |
| chr2.1 | CDS | 48321404 | 48321525 | 48321404 | ID=cds.MS.gene85627.t1;Parent=MS.gene85627.t1 |
| chr2.1 | exon | 48320806 | 48320970 | 48320806 | ID=MS.gene85627.t1.exon5;Parent=MS.gene85627.t1 |
| chr2.1 | CDS | 48320806 | 48320970 | 48320806 | ID=cds.MS.gene85627.t1;Parent=MS.gene85627.t1 |
| chr2.1 | exon | 48320277 | 48320370 | 48320277 | ID=MS.gene85627.t1.exon6;Parent=MS.gene85627.t1 |
| chr2.1 | CDS | 48320277 | 48320370 | 48320277 | ID=cds.MS.gene85627.t1;Parent=MS.gene85627.t1 |
| chr2.1 | exon | 48319191 | 48319392 | 48319191 | ID=MS.gene85627.t1.exon7;Parent=MS.gene85627.t1 |
| chr2.1 | CDS | 48319191 | 48319392 | 48319191 | ID=cds.MS.gene85627.t1;Parent=MS.gene85627.t1 |
| Gene Sequence |
| Protein sequence |
