Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026084.t1 | XP_003595190.1 | 91.4 | 266 | 22 | 1 | 8 | 272 | 4 | 269 | 7.30E-135 | 490 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026084.t1 | G7IIJ8 | 91.4 | 266 | 22 | 1 | 8 | 272 | 4 | 269 | 5.3e-135 | 490.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene026088 | MS.gene026084 | PPI |
MS.gene026084 | MS.gene026085 | PPI |
MS.gene051858 | MS.gene026084 | PPI |
MS.gene026084 | MS.gene85627 | PPI |
MS.gene026084 | MS.gene059902 | PPI |
MS.gene012270 | MS.gene026084 | PPI |
MS.gene85626 | MS.gene026084 | PPI |
MS.gene57567 | MS.gene026084 | PPI |
MS.gene84671 | MS.gene026084 | PPI |
MS.gene026086 | MS.gene026084 | PPI |
MS.gene57569 | MS.gene026084 | PPI |
MS.gene026084 | MS.gene83168 | PPI |
MS.gene026084 | MS.gene026088 | PPI |
MS.gene025115 | MS.gene026084 | PPI |
MS.gene026084 | MS.gene026083 | PPI |
MS.gene025118 | MS.gene026084 | PPI |
MS.gene026084 | MS.gene025116 | PPI |
MS.gene026084 | MS.gene85625 | PPI |
MS.gene025114 | MS.gene026084 | PPI |
MS.gene026083 | MS.gene026084 | PPI |
MS.gene84672 | MS.gene026084 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026084.t1 | MTR_2g039480 | 91.353 | 266 | 22 | 1 | 8 | 272 | 4 | 269 | 1.51e-178 | 492 |
MS.gene026084.t1 | MTR_2g039510 | 80.586 | 273 | 52 | 1 | 1 | 272 | 1 | 273 | 9.30e-164 | 455 |
MS.gene026084.t1 | MTR_2g039450 | 76.119 | 268 | 63 | 1 | 1 | 268 | 1 | 267 | 1.30e-146 | 412 |
MS.gene026084.t1 | MTR_2g039570 | 75.769 | 260 | 62 | 1 | 13 | 272 | 7 | 265 | 1.44e-146 | 411 |
MS.gene026084.t1 | MTR_4g126050 | 67.037 | 270 | 85 | 3 | 1 | 270 | 57 | 322 | 2.81e-130 | 372 |
MS.gene026084.t1 | MTR_4g126120 | 63.258 | 264 | 94 | 2 | 1 | 264 | 1 | 261 | 1.36e-123 | 353 |
MS.gene026084.t1 | MTR_4g126120 | 64.542 | 251 | 87 | 1 | 14 | 264 | 22 | 270 | 2.95e-120 | 345 |
MS.gene026084.t1 | MTR_1g016050 | 57.364 | 258 | 108 | 1 | 14 | 271 | 8 | 263 | 3.05e-104 | 304 |
MS.gene026084.t1 | MTR_4g126050 | 65.405 | 185 | 60 | 3 | 1 | 185 | 57 | 237 | 3.77e-81 | 244 |
MS.gene026084.t1 | MTR_1g016060 | 44.444 | 180 | 79 | 2 | 93 | 271 | 470 | 629 | 1.16e-36 | 137 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026084.t1 | AT1G29840 | 57.854 | 261 | 106 | 2 | 4 | 264 | 52 | 308 | 6.97e-110 | 320 |
MS.gene026084.t1 | AT3G47590 | 60.558 | 251 | 95 | 2 | 14 | 264 | 59 | 305 | 3.94e-109 | 318 |
MS.gene026084.t1 | AT5G11910 | 60.400 | 250 | 97 | 1 | 12 | 261 | 38 | 285 | 5.38e-109 | 318 |
MS.gene026084.t1 | AT5G11910 | 60.400 | 250 | 97 | 1 | 12 | 261 | 20 | 267 | 7.28e-109 | 317 |
MS.gene026084.t1 | AT3G47560 | 59.839 | 249 | 96 | 2 | 13 | 261 | 9 | 253 | 2.48e-107 | 312 |
MS.gene026084.t1 | AT3G47560 | 59.839 | 249 | 96 | 2 | 13 | 261 | 45 | 289 | 9.63e-107 | 311 |
MS.gene026084.t1 | AT3G47560 | 54.579 | 273 | 98 | 2 | 13 | 261 | 9 | 279 | 1.23e-103 | 303 |
MS.gene026084.t1 | AT3G47560 | 53.986 | 276 | 96 | 3 | 13 | 261 | 9 | 280 | 1.52e-100 | 295 |
MS.gene026084.t1 | AT3G47560 | 49.667 | 300 | 98 | 3 | 13 | 261 | 9 | 306 | 5.14e-97 | 288 |
MS.gene026084.t1 | AT2G19550 | 52.941 | 255 | 109 | 6 | 15 | 264 | 5 | 253 | 4.56e-90 | 270 |
MS.gene026084.t1 | AT3G47590 | 60.510 | 157 | 60 | 1 | 14 | 170 | 59 | 213 | 3.07e-65 | 203 |
MS.gene026084.t1 | AT5G11910 | 61.429 | 140 | 52 | 1 | 12 | 151 | 38 | 175 | 4.72e-58 | 183 |
MS.gene026084.t1 | AT5G11910 | 61.429 | 140 | 52 | 1 | 12 | 151 | 20 | 157 | 6.70e-58 | 182 |
Find 44 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTCCTTGGTAAAGATTATT+TGG | 0.131647 | 2.2:+47947101 | MS.gene026084:CDS |
AAGATTATTTGGAAAGAATT+AGG | 0.246216 | 2.2:+47947112 | MS.gene026084:CDS |
CTTGAACCTTGCTGTTGAAT+TGG | 0.268661 | 2.2:+47943912 | MS.gene026084:CDS |
ACACAAGATAACAATTTCTT+TGG | 0.270855 | 2.2:-47943740 | None:intergenic |
CGTGTAATCCGTGCAATTGT+TGG | 0.348094 | 2.2:+47946537 | MS.gene026084:CDS |
AGCGAAGGTTCATTTAAGTT+TGG | 0.351159 | 2.2:+47946453 | MS.gene026084:CDS |
AAAACTGTTGTCAACGTCTC+TGG | 0.357635 | 2.2:+47947048 | MS.gene026084:CDS |
TGTTACTGAGGAAAGTTTGA+TGG | 0.410920 | 2.2:+47947620 | MS.gene026084:CDS |
AGTACCCTTGTCGTGGTCAA+TGG | 0.458533 | 2.2:-47948740 | None:intergenic |
CGGAAGAACCGTGAATTGTA+AGG | 0.458915 | 2.2:-47948573 | None:intergenic |
GGATTACACGATTTGATTCA+CGG | 0.464996 | 2.2:-47946524 | None:intergenic |
TAGCAAACTCGTGTGCATCT+TGG | 0.467700 | 2.2:-47948612 | None:intergenic |
GGCAGGGTCCTTACAATTCA+CGG | 0.468516 | 2.2:+47948565 | MS.gene026084:intron |
GTGATATGCAACTTGTGGTT+TGG | 0.476829 | 2.2:-47948643 | None:intergenic |
TTGGAAAGAATTAGGAAGGA+AGG | 0.481541 | 2.2:+47947120 | MS.gene026084:CDS |
CGACAAGGGTACTGCTAGCT+AGG | 0.488825 | 2.2:+47948750 | MS.gene026084:CDS |
CTTCAGTGATATGCAACTTG+TGG | 0.490269 | 2.2:-47948648 | None:intergenic |
TACTATGTCCAACAATTGCA+CGG | 0.505039 | 2.2:-47946545 | None:intergenic |
GAAATTGTTATCTTGTGTCA+TGG | 0.508242 | 2.2:+47943745 | MS.gene026084:CDS |
CATTTAAGTTTGGTAACCAA+TGG | 0.511919 | 2.2:+47946463 | MS.gene026084:CDS |
AGTTGTTATCAGTTTCATCA+AGG | 0.520276 | 2.2:+47948714 | MS.gene026084:CDS |
TTATTTGGAAAGAATTAGGA+AGG | 0.526480 | 2.2:+47947116 | MS.gene026084:CDS |
ATTGATGTGAAGAACAGCTC+TGG | 0.527910 | 2.2:+47947147 | MS.gene026084:CDS |
AATCATCCACCTCTGTCCAT+TGG | 0.535463 | 2.2:-47946479 | None:intergenic |
GCAATTGTTGGACATAGTAA+AGG | 0.544207 | 2.2:+47946549 | MS.gene026084:CDS |
TGCATTCTCTGTCAATCTGA+AGG | 0.554266 | 2.2:-47947674 | None:intergenic |
AGAGGCATTGAAGAACTCCT+TGG | 0.556053 | 2.2:+47947087 | MS.gene026084:CDS |
TTTCCAAATAATCTTTACCA+AGG | 0.575597 | 2.2:-47947104 | None:intergenic |
TTGGACGGTGTTAATTTCGT+CGG | 0.579627 | 2.2:-47948593 | None:intergenic |
CATTTCCAGAAAAGTCAAAA+CGG | 0.584654 | 2.2:-47943957 | None:intergenic |
TTCAGATTGACAGAGAATGC+AGG | 0.596840 | 2.2:+47947676 | MS.gene026084:CDS |
ATCATAATACACAACAAAAG+CGG | 0.609993 | 2.2:+47943676 | MS.gene026084:CDS |
CACAAGTTGCATATCACTGA+AGG | 0.610229 | 2.2:+47948649 | MS.gene026084:CDS |
CCTTGCTGTTGAATTGGAGA+AGG | 0.613268 | 2.2:+47943918 | MS.gene026084:CDS |
CCTTCTCCAATTCAACAGCA+AGG | 0.620394 | 2.2:-47943918 | None:intergenic |
AGCTAGCAGTACCCTTGTCG+TGG | 0.635781 | 2.2:-47948747 | None:intergenic |
GGAAACCATTGACCACGACA+AGG | 0.643377 | 2.2:+47948735 | MS.gene026084:CDS |
AAACTCGTGTGCATCTTGGA+CGG | 0.651312 | 2.2:-47948608 | None:intergenic |
GAAACCATTGACCACGACAA+GGG | 0.658212 | 2.2:+47948736 | MS.gene026084:CDS |
GTTTGGTAACCAATGGACAG+AGG | 0.662437 | 2.2:+47946470 | MS.gene026084:CDS |
TCCCTAGCTTCACAAAACCC+AGG | 0.663130 | 2.2:+47943546 | MS.gene026084:CDS |
GATGAAACTGATAACAACTG+AGG | 0.664817 | 2.2:-47948710 | None:intergenic |
TCAAACTTTCCTCAGTAACA+CGG | 0.667092 | 2.2:-47947617 | None:intergenic |
TGGTAACCAATGGACAGAGG+TGG | 0.678620 | 2.2:+47946473 | MS.gene026084:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATAGTTTATACTAAAATT+TGG | + | chr2.2:47947368-47947387 | MS.gene026084:intron | 10.0% |
!! | AAGAGAATAATATATTTAGA+TGG | + | chr2.2:47944067-47944086 | MS.gene026084:intron | 15.0% |
!! | TATGTTCTTAATTTCTTAAT+GGG | - | chr2.2:47946057-47946076 | None:intergenic | 15.0% |
!! | TTAACATTATATATGAACAT+AGG | + | chr2.2:47946808-47946827 | MS.gene026084:intron | 15.0% |
!!! | ACTAAAATCAAATTTTGTTA+AGG | - | chr2.2:47947865-47947884 | None:intergenic | 15.0% |
!!! | CTAAAATCAAATTTTGTTAA+GGG | - | chr2.2:47947864-47947883 | None:intergenic | 15.0% |
!!! | TCTATATTTTTTACTTTCTT+AGG | + | chr2.2:47944825-47944844 | MS.gene026084:intron | 15.0% |
!! | AAAATTCCTTTATATGTAGT+AGG | - | chr2.2:47948055-47948074 | None:intergenic | 20.0% |
!! | AAACTTTATTACATGTAACT+CGG | - | chr2.2:47946386-47946405 | None:intergenic | 20.0% |
!! | AAGATTATTTGGAAAGAATT+AGG | + | chr2.2:47947112-47947131 | MS.gene026084:CDS | 20.0% |
!! | ACAAATTTGCATACTAAAAT+GGG | - | chr2.2:47948381-47948400 | None:intergenic | 20.0% |
!! | ACAATGATAAAACTATTTGA+TGG | - | chr2.2:47947208-47947227 | None:intergenic | 20.0% |
!! | ATACAATCTTGAAGTAAAAT+CGG | + | chr2.2:47946001-47946020 | MS.gene026084:intron | 20.0% |
!! | CTAATATTGATATGAAAAGT+CGG | + | chr2.2:47945050-47945069 | MS.gene026084:intron | 20.0% |
!! | GTATGTTCTTAATTTCTTAA+TGG | - | chr2.2:47946058-47946077 | None:intergenic | 20.0% |
!! | TAAGAAATTAAGAACATACT+CGG | + | chr2.2:47946059-47946078 | MS.gene026084:intron | 20.0% |
!! | TAATATTGATATGAAAAGTC+GGG | + | chr2.2:47945051-47945070 | MS.gene026084:intron | 20.0% |
!! | TCATAAATTGGACTTAAAAA+TGG | - | chr2.2:47947781-47947800 | None:intergenic | 20.0% |
!! | TCTATTAATTCAAGAAGAAT+TGG | + | chr2.2:47945238-47945257 | MS.gene026084:intron | 20.0% |
!! | TTCAAAGTAATTCTTAGAAT+TGG | + | chr2.2:47947901-47947920 | MS.gene026084:intron | 20.0% |
!! | TTGAACATTCTTTCATAAAT+TGG | - | chr2.2:47947793-47947812 | None:intergenic | 20.0% |
!! | TTGTCTATATCATTAATCTT+GGG | + | chr2.2:47946414-47946433 | MS.gene026084:intron | 20.0% |
!!! | AATTATTTTTCCTAAGATTG+TGG | - | chr2.2:47945440-47945459 | None:intergenic | 20.0% |
!!! | TAACTTATAACTGATTGTTT+TGG | + | chr2.2:47946160-47946179 | MS.gene026084:intron | 20.0% |
!!! | TTAATAGTCTCCTAAAATTT+TGG | - | chr2.2:47945474-47945493 | None:intergenic | 20.0% |
!!! | TTTATACTAAAATTTGGAAC+CGG | + | chr2.2:47947374-47947393 | MS.gene026084:intron | 20.0% |
!!! | TTTGCTTAATTTGTTTAGTT+TGG | + | chr2.2:47944660-47944679 | MS.gene026084:intron | 20.0% |
!!! | TTTTTTTTTTTTCCCTATGT+AGG | + | chr2.2:47943876-47943895 | MS.gene026084:intron | 20.0% |
! | AACTCTAGATATATTTCAAC+GGG | + | chr2.2:47947485-47947504 | MS.gene026084:intron | 25.0% |
! | ACACAAGATAACAATTTCTT+TGG | - | chr2.2:47943743-47943762 | None:intergenic | 25.0% |
! | ACGAAACAGTGTTTATTAAA+TGG | - | chr2.2:47945609-47945628 | None:intergenic | 25.0% |
! | AGGAGACTATTAAGTTTATA+AGG | + | chr2.2:47945481-47945500 | MS.gene026084:intron | 25.0% |
! | ATAGTAATTGTATTCACCTT+TGG | - | chr2.2:47944206-47944225 | None:intergenic | 25.0% |
! | ATATCAATATTAGTTCCATC+AGG | - | chr2.2:47945043-47945062 | None:intergenic | 25.0% |
! | ATCATAATACACAACAAAAG+CGG | + | chr2.2:47943676-47943695 | MS.gene026084:CDS | 25.0% |
! | ATGAAAAAACCTACTCTAAT+TGG | + | chr2.2:47946834-47946853 | MS.gene026084:intron | 25.0% |
! | ATGTTAGATTACATCCTATA+TGG | + | chr2.2:47948544-47948563 | MS.gene026084:intron | 25.0% |
! | ATGTTGCTACAAATGATATA+TGG | + | chr2.2:47948458-47948477 | MS.gene026084:intron | 25.0% |
! | CAAATTTGTCTACAAAATCA+TGG | + | chr2.2:47948392-47948411 | MS.gene026084:intron | 25.0% |
! | CAACTCTAGATATATTTCAA+CGG | + | chr2.2:47947484-47947503 | MS.gene026084:intron | 25.0% |
! | CAATCAGTTATAAGTTAGTT+AGG | - | chr2.2:47946157-47946176 | None:intergenic | 25.0% |
! | CAATGAGTGATTGTATAAAT+TGG | - | chr2.2:47946610-47946629 | None:intergenic | 25.0% |
! | CTTGTCTATATCATTAATCT+TGG | + | chr2.2:47946413-47946432 | MS.gene026084:intron | 25.0% |
! | GAATGAATCAACAACAATAT+CGG | - | chr2.2:47945678-47945697 | None:intergenic | 25.0% |
! | GACAAATTTGCATACTAAAA+TGG | - | chr2.2:47948382-47948401 | None:intergenic | 25.0% |
! | GATTAAATAAGCCTAAGTAA+AGG | - | chr2.2:47947178-47947197 | None:intergenic | 25.0% |
! | GGAGACTATTAAGTTTATAA+GGG | + | chr2.2:47945482-47945501 | MS.gene026084:intron | 25.0% |
! | TGAAAAAACCTACTCTAATT+GGG | + | chr2.2:47946835-47946854 | MS.gene026084:intron | 25.0% |
! | TGAATCAAATTGTTTGATAC+AGG | - | chr2.2:47944982-47945001 | None:intergenic | 25.0% |
! | TGCATGCATTAAAGTAAAAA+AGG | - | chr2.2:47943801-47943820 | None:intergenic | 25.0% |
! | TTATAGAATTCAAGCATGAA+GGG | - | chr2.2:47948212-47948231 | None:intergenic | 25.0% |
! | TTATTTGGAAAGAATTAGGA+AGG | + | chr2.2:47947116-47947135 | MS.gene026084:CDS | 25.0% |
! | TTCATACTATAACTTTGCAT+AGG | - | chr2.2:47946683-47946702 | None:intergenic | 25.0% |
! | TTGAACATAATCACGTAAAT+CGG | + | chr2.2:47947305-47947324 | MS.gene026084:intron | 25.0% |
! | TTTCCAAATAATCTTTACCA+AGG | - | chr2.2:47947107-47947126 | None:intergenic | 25.0% |
!! | ACTTTGTTTAGAATGAAGTT+AGG | + | chr2.2:47945083-47945102 | MS.gene026084:intron | 25.0% |
!! | CTACATATAAAGGAATTTTG+AGG | + | chr2.2:47948056-47948075 | MS.gene026084:intron | 25.0% |
!! | GTATATTCTAGATTTGTTCT+AGG | + | chr2.2:47944632-47944651 | MS.gene026084:intron | 25.0% |
!! | TGTCATTTCTGAAAATCAAT+TGG | - | chr2.2:47945913-47945932 | None:intergenic | 25.0% |
!! | TTATACTAAAATTTGGAACC+GGG | + | chr2.2:47947375-47947394 | MS.gene026084:intron | 25.0% |
!!! | AACTTCTACTTGTTGTTAAT+AGG | + | chr2.2:47945133-47945152 | MS.gene026084:intron | 25.0% |
!!! | ATTGTTGTTGATTCATTCAT+TGG | + | chr2.2:47945680-47945699 | MS.gene026084:intron | 25.0% |
!!! | CAAACTTGTTGTTTAAAGAT+TGG | + | chr2.2:47945164-47945183 | MS.gene026084:intron | 25.0% |
!!! | CTTTTAGCTAATTATCTAGT+AGG | - | chr2.2:47944743-47944762 | None:intergenic | 25.0% |
AAAATCATGGTGTAGTTCTT+TGG | + | chr2.2:47948405-47948424 | MS.gene026084:intron | 30.0% | |
AAAGTAACTGTGATCAATCA+AGG | + | chr2.2:47944010-47944029 | MS.gene026084:intron | 30.0% | |
AAATAATGAATTCCTTGTCC+TGG | + | chr2.2:47946330-47946349 | MS.gene026084:intron | 30.0% | |
AACTCTGATCAAATGAGAAA+AGG | + | chr2.2:47948272-47948291 | MS.gene026084:intron | 30.0% | |
AATACCACTTAATTTACACC+AGG | - | chr2.2:47946351-47946370 | None:intergenic | 30.0% | |
ACACATGAAATTTGAGAAGA+AGG | - | chr2.2:47946922-47946941 | None:intergenic | 30.0% | |
ACTCCTTGGTAAAGATTATT+TGG | + | chr2.2:47947101-47947120 | MS.gene026084:CDS | 30.0% | |
AGATAATTAGCTAAAAGCTG+AGG | + | chr2.2:47944746-47944765 | MS.gene026084:intron | 30.0% | |
AGTTGTTATCAGTTTCATCA+AGG | + | chr2.2:47948714-47948733 | MS.gene026084:CDS | 30.0% | |
ATAAAGGATCAAAGGAGTTA+AGG | - | chr2.2:47944178-47944197 | None:intergenic | 30.0% | |
ATAATCATCAAGTTCGTCTA+TGG | - | chr2.2:47946751-47946770 | None:intergenic | 30.0% | |
ATCAATAACAGAAACTTACC+TGG | - | chr2.2:47943567-47943586 | None:intergenic | 30.0% | |
ATTCAGAAAACACAATCGAA+AGG | + | chr2.2:47944997-47945016 | MS.gene026084:intron | 30.0% | |
CAAAGAATGACTAATAAGAG+TGG | + | chr2.2:47945204-47945223 | MS.gene026084:intron | 30.0% | |
CATTTCCAGAAAAGTCAAAA+CGG | - | chr2.2:47943960-47943979 | None:intergenic | 30.0% | |
CCAATATTGTTTATCCAGTT+AGG | - | chr2.2:47944548-47944567 | None:intergenic | 30.0% | |
CCTAACTGGATAAACAATAT+TGG | + | chr2.2:47944545-47944564 | MS.gene026084:intron | 30.0% | |
CTAATCAACCATTACAAAAC+CGG | + | chr2.2:47948012-47948031 | MS.gene026084:intron | 30.0% | |
CTTATAGAATTCAAGCATGA+AGG | - | chr2.2:47948213-47948232 | None:intergenic | 30.0% | |
CTTCTTGAATTAATAGATCC+AGG | - | chr2.2:47945235-47945254 | None:intergenic | 30.0% | |
GAAAACTTTAGTCATGTTAC+AGG | - | chr2.2:47946027-47946046 | None:intergenic | 30.0% | |
GAAATTGTTATCTTGTGTCA+TGG | + | chr2.2:47943745-47943764 | MS.gene026084:CDS | 30.0% | |
GTATATTCTTCGTTGTGTTT+AGG | + | chr2.2:47944131-47944150 | MS.gene026084:intron | 30.0% | |
TCAATAACAGAAACTTACCT+GGG | - | chr2.2:47943566-47943585 | None:intergenic | 30.0% | |
TGTCTTTGAATTGATTGTGT+GGG | + | chr2.2:47944597-47944616 | MS.gene026084:intron | 30.0% | |
TTGAGAACATATATTGTTGC+AGG | + | chr2.2:47947582-47947601 | MS.gene026084:intron | 30.0% | |
! | AATCTTGGGTTTTTCTTCAA+GGG | + | chr2.2:47946428-47946447 | MS.gene026084:intron | 30.0% |
! | ATTTCTGAAAATCAATTGGC+AGG | - | chr2.2:47945909-47945928 | None:intergenic | 30.0% |
! | CATTTAAGTTTGGTAACCAA+TGG | + | chr2.2:47946463-47946482 | MS.gene026084:CDS | 30.0% |
! | GGTCAGCATAATTTGATTTA+GGG | + | chr2.2:47944319-47944338 | MS.gene026084:intron | 30.0% |
! | GTGACTTGAACCAAAATTTT+AGG | + | chr2.2:47945461-47945480 | MS.gene026084:intron | 30.0% |
! | TAATCTTGGGTTTTTCTTCA+AGG | + | chr2.2:47946427-47946446 | MS.gene026084:intron | 30.0% |
! | TATACTAAAATTTGGAACCG+GGG | + | chr2.2:47947376-47947395 | MS.gene026084:intron | 30.0% |
! | TGGTCAGCATAATTTGATTT+AGG | + | chr2.2:47944318-47944337 | MS.gene026084:intron | 30.0% |
!! | AATCAGTGTTTTTCAGTTTC+TGG | + | chr2.2:47944298-47944317 | MS.gene026084:intron | 30.0% |
!! | CTTGTTGTTTAAAGATTGGT+AGG | + | chr2.2:47945168-47945187 | MS.gene026084:intron | 30.0% |
!! | TACCAGTAAGTAACTTGTTA+AGG | - | chr2.2:47948505-47948524 | None:intergenic | 30.0% |
!!! | GAAACTGTCTCTGAAATTTT+TGG | + | chr2.2:47944234-47944253 | MS.gene026084:intron | 30.0% |
!!! | GTTTTGACTTTTCTGGAAAT+GGG | + | chr2.2:47943959-47943978 | MS.gene026084:CDS | 30.0% |
AAAAGCGGTGAAAAACTAGT+TGG | + | chr2.2:47943691-47943710 | MS.gene026084:CDS | 35.0% | |
AAGGGACATGATAGAAACTA+TGG | + | chr2.2:47944428-47944447 | MS.gene026084:intron | 35.0% | |
AATCATCCTAGCAAACTTTG+GGG | - | chr2.2:47946951-47946970 | None:intergenic | 35.0% | |
ACAGTTCATACTTGCAATTG+TGG | - | chr2.2:47946117-47946136 | None:intergenic | 35.0% | |
ACTAGAACTCGATTCATAGA+GGG | + | chr2.2:47945977-47945996 | MS.gene026084:intron | 35.0% | |
ACTTAATTTACACCAGGACA+AGG | - | chr2.2:47946345-47946364 | None:intergenic | 35.0% | |
AGAAAACTCAGATTCCAAGA+TGG | - | chr2.2:47947994-47948013 | None:intergenic | 35.0% | |
AGAATGACTAATAAGAGTGG+TGG | + | chr2.2:47945207-47945226 | MS.gene026084:intron | 35.0% | |
AGATTACATCCTATATGGCA+GGG | + | chr2.2:47948549-47948568 | MS.gene026084:intron | 35.0% | |
ATAACTTTGCATAGGCAATG+AGG | - | chr2.2:47946675-47946694 | None:intergenic | 35.0% | |
ATTTACTCCCTAATCAAGTG+AGG | + | chr2.2:47948351-47948370 | MS.gene026084:intron | 35.0% | |
CAAGTAGAAGTTTCAGATGT+AGG | - | chr2.2:47945125-47945144 | None:intergenic | 35.0% | |
CAATCATCCTAGCAAACTTT+GGG | - | chr2.2:47946952-47946971 | None:intergenic | 35.0% | |
CTCTGGTAAATCCTTTACTT+AGG | + | chr2.2:47947164-47947183 | MS.gene026084:intron | 35.0% | |
CTGATAGAAACACAGGAATT+AGG | - | chr2.2:47945634-47945653 | None:intergenic | 35.0% | |
CTGTCTTTGAATTGATTGTG+TGG | + | chr2.2:47944596-47944615 | MS.gene026084:intron | 35.0% | |
GACAAATGCTATAAGCTTGA+TGG | - | chr2.2:47945788-47945807 | None:intergenic | 35.0% | |
GACAGTGATAAAAAGAGAAG+AGG | - | chr2.2:47944581-47944600 | None:intergenic | 35.0% | |
GACCTTAACAAGTTACTTAC+TGG | + | chr2.2:47948500-47948519 | MS.gene026084:intron | 35.0% | |
GAGTTAAGGAGTTAAAGATC+AGG | - | chr2.2:47944164-47944183 | None:intergenic | 35.0% | |
GATGAAACTGATAACAACTG+AGG | - | chr2.2:47948713-47948732 | None:intergenic | 35.0% | |
GCAATTGTTGGACATAGTAA+AGG | + | chr2.2:47946549-47946568 | MS.gene026084:CDS | 35.0% | |
GCTGAGGAATATAGCAAAAA+TGG | + | chr2.2:47944762-47944781 | MS.gene026084:intron | 35.0% | |
GGATTACACGATTTGATTCA+CGG | - | chr2.2:47946527-47946546 | None:intergenic | 35.0% | |
GTAAGATAAATCAGAGCCTA+AGG | - | chr2.2:47945556-47945575 | None:intergenic | 35.0% | |
GTGAATTCAAACAAGACAAG+TGG | - | chr2.2:47944704-47944723 | None:intergenic | 35.0% | |
GTTAAATGAATGCACATTCC+TGG | - | chr2.2:47946641-47946660 | None:intergenic | 35.0% | |
TACTAGAACTCGATTCATAG+AGG | + | chr2.2:47945976-47945995 | MS.gene026084:intron | 35.0% | |
TACTATGTCCAACAATTGCA+CGG | - | chr2.2:47946548-47946567 | None:intergenic | 35.0% | |
TAGATTACATCCTATATGGC+AGG | + | chr2.2:47948548-47948567 | MS.gene026084:intron | 35.0% | |
TCAAACTTTCCTCAGTAACA+CGG | - | chr2.2:47947620-47947639 | None:intergenic | 35.0% | |
TCACTCATTGAAGAAAAACC+AGG | + | chr2.2:47946620-47946639 | MS.gene026084:intron | 35.0% | |
TCTAGAAATCATGCTTGTGT+GGG | - | chr2.2:47945381-47945400 | None:intergenic | 35.0% | |
TCTAGTACTACTTCAACAAG+AGG | - | chr2.2:47945963-47945982 | None:intergenic | 35.0% | |
TCTTTCTTTCTTATCAGAGG+TGG | + | chr2.2:47945848-47945867 | MS.gene026084:intron | 35.0% | |
TGATCCTTTATCTCAACCAA+AGG | + | chr2.2:47944187-47944206 | MS.gene026084:intron | 35.0% | |
TGCAGAAGAAACAGTTACAT+CGG | - | chr2.2:47946303-47946322 | None:intergenic | 35.0% | |
TGGTCTTTCTTTCTTATCAG+AGG | + | chr2.2:47945845-47945864 | MS.gene026084:intron | 35.0% | |
TGGTTGAGATAAAGGATCAA+AGG | - | chr2.2:47944186-47944205 | None:intergenic | 35.0% | |
TGTAACTCTCTTGAGAGAAA+GGG | + | chr2.2:47944410-47944429 | MS.gene026084:intron | 35.0% | |
TGTTACTGAGGAAAGTTTGA+TGG | + | chr2.2:47947620-47947639 | MS.gene026084:CDS | 35.0% | |
TTCACCTTTGGTTGAGATAA+AGG | - | chr2.2:47944194-47944213 | None:intergenic | 35.0% | |
TTGGAAAGAATTAGGAAGGA+AGG | + | chr2.2:47947120-47947139 | MS.gene026084:CDS | 35.0% | |
TTGTAACTCTCTTGAGAGAA+AGG | + | chr2.2:47944409-47944428 | MS.gene026084:intron | 35.0% | |
TTGTCCTGGTGTAAATTAAG+TGG | + | chr2.2:47946344-47946363 | MS.gene026084:intron | 35.0% | |
TTTACTCCCTAATCAAGTGA+GGG | + | chr2.2:47948352-47948371 | MS.gene026084:intron | 35.0% | |
! | AGAGTAATGGAGAGAAGTTA+GGG | + | chr2.2:47944344-47944363 | MS.gene026084:intron | 35.0% |
! | AGCGAAGGTTCATTTAAGTT+TGG | + | chr2.2:47946453-47946472 | MS.gene026084:CDS | 35.0% |
! | AGTTTTCACGTCGTGATATT+TGG | - | chr2.2:47947034-47947053 | None:intergenic | 35.0% |
! | CACAAGCATGATTTCTAGAA+AGG | + | chr2.2:47945382-47945401 | MS.gene026084:intron | 35.0% |
! | CTTGCAAAAATTAGCTTCGA+GGG | - | chr2.2:47944469-47944488 | None:intergenic | 35.0% |
! | TCTTGCAAAAATTAGCTTCG+AGG | - | chr2.2:47944470-47944489 | None:intergenic | 35.0% |
! | TTCTAGAAATCATGCTTGTG+TGG | - | chr2.2:47945382-47945401 | None:intergenic | 35.0% |
! | TTGATTTAGGGTCAGAGTAA+TGG | + | chr2.2:47944331-47944350 | MS.gene026084:intron | 35.0% |
!! | ACTCTCAATCAAAAGTGTCA+AGG | - | chr2.2:47944887-47944906 | None:intergenic | 35.0% |
!! | GTTCTTGATAGTTGACTTGT+GGG | + | chr2.2:47946879-47946898 | MS.gene026084:intron | 35.0% |
!! | GTTGATAATAGCTGCATGAT+TGG | + | chr2.2:47946187-47946206 | MS.gene026084:intron | 35.0% |
!! | TGTTCTTGATAGTTGACTTG+TGG | + | chr2.2:47946878-47946897 | MS.gene026084:intron | 35.0% |
!! | TTCTTGATAGTTGACTTGTG+GGG | + | chr2.2:47946880-47946899 | MS.gene026084:intron | 35.0% |
!! | TTTTGATTACCGTGTTACTG+AGG | + | chr2.2:47947608-47947627 | MS.gene026084:CDS | 35.0% |
!!! | CGTTTTGACTTTTCTGGAAA+TGG | + | chr2.2:47943958-47943977 | MS.gene026084:CDS | 35.0% |
!!! | TCTTTCCGTTTTGACTTTTC+TGG | + | chr2.2:47943952-47943971 | MS.gene026084:CDS | 35.0% |
AAAACTGTTGTCAACGTCTC+TGG | + | chr2.2:47947048-47947067 | MS.gene026084:CDS | 40.0% | |
AAATCATGCTTGTGTGGGTT+AGG | - | chr2.2:47945376-47945395 | None:intergenic | 40.0% | |
AAGCACTACTGATACAGACA+CGG | + | chr2.2:47947237-47947256 | MS.gene026084:intron | 40.0% | |
AGACCACAGTGAGAAAACAT+TGG | + | chr2.2:47945825-47945844 | MS.gene026084:intron | 40.0% | |
ATAAACACATGCAGAACGCA+AGG | - | chr2.2:47947352-47947371 | None:intergenic | 40.0% | |
ATCATCCTAGCAAACTTTGG+GGG | - | chr2.2:47946950-47946969 | None:intergenic | 40.0% | |
ATCATTAAGCACCAACTCTC+TGG | + | chr2.2:47945524-47945543 | MS.gene026084:intron | 40.0% | |
ATGAGATCAGTGTCCTACAT+AGG | - | chr2.2:47943892-47943911 | None:intergenic | 40.0% | |
ATGTGAGAGTAAAGACCTGA+TGG | + | chr2.2:47945025-47945044 | MS.gene026084:intron | 40.0% | |
ATTGATGTGAAGAACAGCTC+TGG | + | chr2.2:47947147-47947166 | MS.gene026084:CDS | 40.0% | |
CACAAGTTGCATATCACTGA+AGG | + | chr2.2:47948649-47948668 | MS.gene026084:CDS | 40.0% | |
CCAATCATCCTAGCAAACTT+TGG | - | chr2.2:47946953-47946972 | None:intergenic | 40.0% | |
CTCAGATTCCAAGATGGTAT+CGG | - | chr2.2:47947988-47948007 | None:intergenic | 40.0% | |
CTGTATCAGTAGTGCTTCAT+AGG | - | chr2.2:47947234-47947253 | None:intergenic | 40.0% | |
CTTCAGTGATATGCAACTTG+TGG | - | chr2.2:47948651-47948670 | None:intergenic | 40.0% | |
GATTAACTCCGATACCATCT+TGG | + | chr2.2:47947977-47947996 | MS.gene026084:intron | 40.0% | |
GGGATGCCTACTACATATAA+AGG | + | chr2.2:47948046-47948065 | MS.gene026084:intron | 40.0% | |
GTGATATGCAACTTGTGGTT+TGG | - | chr2.2:47948646-47948665 | None:intergenic | 40.0% | |
GTTCATACTTGCAATTGTGG+TGG | - | chr2.2:47946114-47946133 | None:intergenic | 40.0% | |
TAGAAAGGAGTAGAAGCTGA+GGG | + | chr2.2:47945397-47945416 | MS.gene026084:intron | 40.0% | |
TAGGTCAATTTGAGCCTAAC+TGG | + | chr2.2:47944531-47944550 | MS.gene026084:intron | 40.0% | |
TCTTCAGCTGATAGAAACAC+AGG | - | chr2.2:47945641-47945660 | None:intergenic | 40.0% | |
TGAGATCAGTGTCCTACATA+GGG | - | chr2.2:47943891-47943910 | None:intergenic | 40.0% | |
TGCATTCTCTGTCAATCTGA+AGG | - | chr2.2:47947677-47947696 | None:intergenic | 40.0% | |
TGCTTGTAATTGTGTATCCC+CGG | - | chr2.2:47947396-47947415 | None:intergenic | 40.0% | |
TTACTCCCTAATCAAGTGAG+GGG | + | chr2.2:47948353-47948372 | MS.gene026084:intron | 40.0% | |
TTATCCACTATCGAGCAACT+CGG | - | chr2.2:47947943-47947962 | None:intergenic | 40.0% | |
TTCAGATTGACAGAGAATGC+AGG | + | chr2.2:47947676-47947695 | MS.gene026084:CDS | 40.0% | |
TTGCTCTTGGTGAGAAATTG+AGG | + | chr2.2:47944368-47944387 | MS.gene026084:intron | 40.0% | |
! | AGACCAATGTTTTCTCACTG+TGG | - | chr2.2:47945831-47945850 | None:intergenic | 40.0% |
! | CAGAGTAATGGAGAGAAGTT+AGG | + | chr2.2:47944343-47944362 | MS.gene026084:intron | 40.0% |
! | CTACAAGGAGAATCAAGTTG+TGG | - | chr2.2:47945753-47945772 | None:intergenic | 40.0% |
! | TCTTTGGAGAAGAGATGTGA+AGG | + | chr2.2:47948421-47948440 | MS.gene026084:intron | 40.0% |
! | TTGGACGGTGTTAATTTCGT+CGG | - | chr2.2:47948596-47948615 | None:intergenic | 40.0% |
! | TTTTCTCACTGTGGTCTAGT+CGG | - | chr2.2:47945822-47945841 | None:intergenic | 40.0% |
! | TTTTCTTCAAGGGAAAGCGA+AGG | + | chr2.2:47946438-47946457 | MS.gene026084:intron | 40.0% |
!! | AAATCGGTATCGACACATGT+TGG | + | chr2.2:47947321-47947340 | MS.gene026084:intron | 40.0% |
!! | CCAAAGTTTGCTAGGATGAT+TGG | + | chr2.2:47946950-47946969 | MS.gene026084:intron | 40.0% |
!! | CTTGAACCTTGCTGTTGAAT+TGG | + | chr2.2:47943912-47943931 | MS.gene026084:CDS | 40.0% |
!! | TCTATGGCATGGTTTTGCAA+AGG | - | chr2.2:47946735-47946754 | None:intergenic | 40.0% |
!! | TCTTGATAGTTGACTTGTGG+GGG | + | chr2.2:47946881-47946900 | MS.gene026084:intron | 40.0% |
AAACTCGTGTGCATCTTGGA+CGG | - | chr2.2:47948611-47948630 | None:intergenic | 45.0% | |
AATCATCCACCTCTGTCCAT+TGG | - | chr2.2:47946482-47946501 | None:intergenic | 45.0% | |
AATTGTTTGTGCCCTGATGC+AGG | + | chr2.2:47946982-47947001 | MS.gene026084:intron | 45.0% | |
ACTTGATTCTCCTTGTAGCC+TGG | + | chr2.2:47945755-47945774 | MS.gene026084:intron | 45.0% | |
AGGCTGTATCTCATTCGATG+TGG | + | chr2.2:47948076-47948095 | MS.gene026084:intron | 45.0% | |
ATATGACACCGTGGTCCAAT+AGG | + | chr2.2:47945341-47945360 | MS.gene026084:intron | 45.0% | |
ATTGTCGCATGTCGCAAGAA+CGG | - | chr2.2:47944921-47944940 | None:intergenic | 45.0% | |
CAGTGACACCCAATTAGAGT+AGG | - | chr2.2:47946846-47946865 | None:intergenic | 45.0% | |
CATCAAGTTCGTCTATGGCA+TGG | - | chr2.2:47946746-47946765 | None:intergenic | 45.0% | |
CCATCAATCCTATTGGACCA+CGG | - | chr2.2:47945352-47945371 | None:intergenic | 45.0% | |
CCTTCTCCAATTCAACAGCA+AGG | - | chr2.2:47943921-47943940 | None:intergenic | 45.0% | |
CGGAAGAACCGTGAATTGTA+AGG | - | chr2.2:47948576-47948595 | None:intergenic | 45.0% | |
CGTGGTCCAATAGGATTGAT+GGG | + | chr2.2:47945350-47945369 | MS.gene026084:intron | 45.0% | |
CGTGTAATCCGTGCAATTGT+TGG | + | chr2.2:47946537-47946556 | MS.gene026084:CDS | 45.0% | |
CTAGAAAGGAGTAGAAGCTG+AGG | + | chr2.2:47945396-47945415 | MS.gene026084:intron | 45.0% | |
CTATGTTACCTCCTGCATCA+GGG | - | chr2.2:47946996-47947015 | None:intergenic | 45.0% | |
GAAACCATTGACCACGACAA+GGG | + | chr2.2:47948736-47948755 | MS.gene026084:CDS | 45.0% | |
GAAACTAAAGCAACCACGTC+AGG | - | chr2.2:47946281-47946300 | None:intergenic | 45.0% | |
GAGAAGTTAGGGATTGCTCT+TGG | + | chr2.2:47944355-47944374 | MS.gene026084:intron | 45.0% | |
GATGTAGGTACTATCACTGC+AGG | - | chr2.2:47945110-47945129 | None:intergenic | 45.0% | |
GCAGTGAATCGAGTGAATCT+TGG | - | chr2.2:47945302-47945321 | None:intergenic | 45.0% | |
GGCTGTATCTCATTCGATGT+GGG | + | chr2.2:47948077-47948096 | MS.gene026084:intron | 45.0% | |
GTTAGGCCCATCAATCCTAT+TGG | - | chr2.2:47945359-47945378 | None:intergenic | 45.0% | |
TACTCCCTAATCAAGTGAGG+GGG | + | chr2.2:47948354-47948373 | MS.gene026084:intron | 45.0% | |
TAGCAAACTCGTGTGCATCT+TGG | - | chr2.2:47948615-47948634 | None:intergenic | 45.0% | |
TATCCACTATCGAGCAACTC+GGG | - | chr2.2:47947942-47947961 | None:intergenic | 45.0% | |
TGACAGAGAATGCAGGTTAG+AGG | + | chr2.2:47947683-47947702 | MS.gene026084:intron | 45.0% | |
TTAAGCACCAACTCTCTGGT+AGG | + | chr2.2:47945528-47945547 | MS.gene026084:intron | 45.0% | |
TTGTAAGGACCCTGCCATAT+AGG | - | chr2.2:47948561-47948580 | None:intergenic | 45.0% | |
TTTACCAGCGTCAACGTGTT+TGG | - | chr2.2:47947266-47947285 | None:intergenic | 45.0% | |
! | AAGCTTGATGGTTATCCACC+AGG | - | chr2.2:47945776-47945795 | None:intergenic | 45.0% |
! | GTTTGGTAACCAATGGACAG+AGG | + | chr2.2:47946470-47946489 | MS.gene026084:CDS | 45.0% |
!! | ACCTGGGTTTTGTGAAGCTA+GGG | - | chr2.2:47943550-47943569 | None:intergenic | 45.0% |
!! | AGAGGCATTGAAGAACTCCT+TGG | + | chr2.2:47947087-47947106 | MS.gene026084:CDS | 45.0% |
!! | CACACAAGCCGGTTTTGTAA+TGG | - | chr2.2:47948023-47948042 | None:intergenic | 45.0% |
!! | CCTTGCTGTTGAATTGGAGA+AGG | + | chr2.2:47943918-47943937 | MS.gene026084:CDS | 45.0% |
!! | CTAATAAGAGTGGTGGATCC+TGG | + | chr2.2:47945214-47945233 | MS.gene026084:intron | 45.0% |
!! | GGACGTTTTGATCTGAAGAG+AGG | + | chr2.2:47947069-47947088 | MS.gene026084:CDS | 45.0% |
!! | TACCTGGGTTTTGTGAAGCT+AGG | - | chr2.2:47943551-47943570 | None:intergenic | 45.0% |
AACTCTCTGGTAGGAGCCTT+AGG | + | chr2.2:47945537-47945556 | MS.gene026084:intron | 50.0% | |
ACTAAAGCAACCACGTCAGG+CGG | - | chr2.2:47946278-47946297 | None:intergenic | 50.0% | |
AGAAGCTGAGGGAAGCTTTG+TGG | + | chr2.2:47945408-47945427 | MS.gene026084:intron | 50.0% | |
AGTACCCTTGTCGTGGTCAA+TGG | - | chr2.2:47948743-47948762 | None:intergenic | 50.0% | |
ATGTCGCAAGAACGGATAGC+GGG | - | chr2.2:47944913-47944932 | None:intergenic | 50.0% | |
CAGAACAACCACGACAGAGA+TGG | - | chr2.2:47944794-47944813 | None:intergenic | 50.0% | |
CATGTCGCAAGAACGGATAG+CGG | - | chr2.2:47944914-47944933 | None:intergenic | 50.0% | |
CCGTGGTCCAATAGGATTGA+TGG | + | chr2.2:47945349-47945368 | MS.gene026084:intron | 50.0% | |
CGACTGTTGATATGACACCG+TGG | + | chr2.2:47945332-47945351 | MS.gene026084:intron | 50.0% | |
CTCTGTCGTGGTTGTTCTGT+TGG | + | chr2.2:47944795-47944814 | MS.gene026084:intron | 50.0% | |
GCTATGTTACCTCCTGCATC+AGG | - | chr2.2:47946997-47947016 | None:intergenic | 50.0% | |
GCTGTTCAGTCTTCACAGCA+AGG | - | chr2.2:47945885-47945904 | None:intergenic | 50.0% | |
GGAAACCATTGACCACGACA+AGG | + | chr2.2:47948735-47948754 | MS.gene026084:CDS | 50.0% | |
GGCAGGGTCCTTACAATTCA+CGG | + | chr2.2:47948565-47948584 | MS.gene026084:intron | 50.0% | |
GGCTCAAATTGACCTACGAC+TGG | - | chr2.2:47944527-47944546 | None:intergenic | 50.0% | |
GTCGTGGTTGTTCTGTTGGA+AGG | + | chr2.2:47944799-47944818 | MS.gene026084:intron | 50.0% | |
GTGGCTTGAGCCACAATCTT+AGG | + | chr2.2:47945427-47945446 | MS.gene026084:intron | 50.0% | |
TAAGGCTCCTACCAGAGAGT+TGG | - | chr2.2:47945538-47945557 | None:intergenic | 50.0% | |
TCCCTAGCTTCACAAAACCC+AGG | + | chr2.2:47943546-47943565 | MS.gene026084:CDS | 50.0% | |
TGATTCTCCTTGTAGCCTGG+TGG | + | chr2.2:47945758-47945777 | MS.gene026084:intron | 50.0% | |
TGGTAACCAATGGACAGAGG+TGG | + | chr2.2:47946473-47946492 | MS.gene026084:CDS | 50.0% | |
TGGTTATCCACCAGGCTACA+AGG | - | chr2.2:47945768-47945787 | None:intergenic | 50.0% | |
! | CCTAGCAAACTTTGGGGGAA+AGG | - | chr2.2:47946945-47946964 | None:intergenic | 50.0% |
! | CCTTTCCCCCAAAGTTTGCT+AGG | + | chr2.2:47946942-47946961 | MS.gene026084:intron | 50.0% |
AGCTAGCAGTACCCTTGTCG+TGG | - | chr2.2:47948750-47948769 | None:intergenic | 55.0% | |
GACACCAAACACGTTGACGC+TGG | + | chr2.2:47947259-47947278 | MS.gene026084:intron | 55.0% | |
GGACAAAGCCATCTCTGTCG+TGG | + | chr2.2:47944783-47944802 | MS.gene026084:intron | 55.0% | |
GGGTCCCCCTCACTTGATTA+GGG | - | chr2.2:47948361-47948380 | None:intergenic | 55.0% | |
TGACCCGAGTTGCTCGATAG+TGG | + | chr2.2:47947936-47947955 | MS.gene026084:intron | 55.0% | |
TGGGTCCCCCTCACTTGATT+AGG | - | chr2.2:47948362-47948381 | None:intergenic | 55.0% | |
TGTCGCAAGAACGGATAGCG+GGG | - | chr2.2:47944912-47944931 | None:intergenic | 55.0% | |
TGTTTGTGCCCTGATGCAGG+AGG | + | chr2.2:47946985-47947004 | MS.gene026084:intron | 55.0% | |
!! | ACAAAACCGGCTTGTGTGCG+AGG | + | chr2.2:47948025-47948044 | MS.gene026084:intron | 55.0% |
!! | CAAAACCGGCTTGTGTGCGA+GGG | + | chr2.2:47948026-47948045 | MS.gene026084:intron | 55.0% |
GAGCTGCTCTCTCCAGTCGT+AGG | + | chr2.2:47944512-47944531 | MS.gene026084:intron | 60.0% | |
! | GTGTTTCTGACCGCCTGACG+TGG | + | chr2.2:47946265-47946284 | MS.gene026084:intron | 60.0% |
GGCATCCCTCGCACACAAGC+CGG | - | chr2.2:47948034-47948053 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 47943543 | 47948771 | 47943543 | ID=MS.gene026084 |
chr2.2 | mRNA | 47943543 | 47948771 | 47943543 | ID=MS.gene026084.t1;Parent=MS.gene026084 |
chr2.2 | exon | 47943543 | 47943567 | 47943543 | ID=MS.gene026084.t1.exon1;Parent=MS.gene026084.t1 |
chr2.2 | CDS | 47943543 | 47943567 | 47943543 | ID=cds.MS.gene026084.t1;Parent=MS.gene026084.t1 |
chr2.2 | exon | 47943656 | 47943783 | 47943656 | ID=MS.gene026084.t1.exon2;Parent=MS.gene026084.t1 |
chr2.2 | CDS | 47943656 | 47943783 | 47943656 | ID=cds.MS.gene026084.t1;Parent=MS.gene026084.t1 |
chr2.2 | exon | 47943898 | 47943980 | 47943898 | ID=MS.gene026084.t1.exon3;Parent=MS.gene026084.t1 |
chr2.2 | CDS | 47943898 | 47943980 | 47943898 | ID=cds.MS.gene026084.t1;Parent=MS.gene026084.t1 |
chr2.2 | exon | 47946449 | 47946570 | 47946449 | ID=MS.gene026084.t1.exon4;Parent=MS.gene026084.t1 |
chr2.2 | CDS | 47946449 | 47946570 | 47946449 | ID=cds.MS.gene026084.t1;Parent=MS.gene026084.t1 |
chr2.2 | exon | 47947004 | 47947168 | 47947004 | ID=MS.gene026084.t1.exon5;Parent=MS.gene026084.t1 |
chr2.2 | CDS | 47947004 | 47947168 | 47947004 | ID=cds.MS.gene026084.t1;Parent=MS.gene026084.t1 |
chr2.2 | exon | 47947604 | 47947697 | 47947604 | ID=MS.gene026084.t1.exon6;Parent=MS.gene026084.t1 |
chr2.2 | CDS | 47947604 | 47947697 | 47947604 | ID=cds.MS.gene026084.t1;Parent=MS.gene026084.t1 |
chr2.2 | exon | 47948570 | 47948771 | 47948570 | ID=MS.gene026084.t1.exon7;Parent=MS.gene026084.t1 |
chr2.2 | CDS | 47948570 | 47948771 | 47948570 | ID=cds.MS.gene026084.t1;Parent=MS.gene026084.t1 |
Gene Sequence |
Protein sequence |