Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85625.t1 | XP_003595198.3 | 95.2 | 270 | 13 | 0 | 25 | 294 | 1 | 270 | 1.00E-142 | 516.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85625.t1 | A2Q1D0 | 95.2 | 270 | 13 | 0 | 25 | 294 | 1 | 270 | 7.4e-143 | 516.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene85625 | MS.gene026085 | PPI |
| MS.gene85625 | MS.gene85627 | PPI |
| MS.gene026083 | MS.gene85625 | PPI |
| MS.gene026088 | MS.gene85625 | PPI |
| MS.gene85625 | MS.gene059902 | PPI |
| MS.gene025118 | MS.gene85625 | PPI |
| MS.gene026085 | MS.gene85625 | PPI |
| MS.gene012270 | MS.gene85625 | PPI |
| MS.gene025114 | MS.gene85625 | PPI |
| MS.gene84672 | MS.gene85625 | PPI |
| MS.gene83168 | MS.gene85625 | PPI |
| MS.gene57567 | MS.gene85625 | PPI |
| MS.gene051858 | MS.gene85625 | PPI |
| MS.gene85625 | MS.gene83168 | PPI |
| MS.gene57569 | MS.gene85625 | PPI |
| MS.gene025116 | MS.gene85625 | PPI |
| MS.gene025115 | MS.gene85625 | PPI |
| MS.gene85626 | MS.gene85625 | PPI |
| MS.gene84671 | MS.gene85625 | PPI |
| MS.gene026086 | MS.gene85625 | PPI |
| MS.gene85625 | MS.gene025116 | PPI |
| MS.gene026084 | MS.gene85625 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85625.t1 | MTR_2g039570 | 95.094 | 265 | 13 | 0 | 30 | 294 | 1 | 265 | 0.0 | 519 |
| MS.gene85625.t1 | MTR_2g039510 | 83.142 | 261 | 42 | 1 | 36 | 294 | 13 | 273 | 5.83e-162 | 451 |
| MS.gene85625.t1 | MTR_2g039480 | 75.655 | 267 | 63 | 1 | 30 | 294 | 3 | 269 | 4.30e-148 | 416 |
| MS.gene85625.t1 | MTR_4g126050 | 64.706 | 289 | 99 | 3 | 4 | 292 | 37 | 322 | 3.53e-134 | 383 |
| MS.gene85625.t1 | MTR_2g039450 | 70.189 | 265 | 75 | 1 | 30 | 290 | 3 | 267 | 6.59e-133 | 379 |
| MS.gene85625.t1 | MTR_4g126120 | 62.977 | 262 | 96 | 1 | 25 | 286 | 1 | 261 | 1.54e-125 | 359 |
| MS.gene85625.t1 | MTR_4g126120 | 65.339 | 251 | 86 | 1 | 36 | 286 | 21 | 270 | 2.90e-125 | 358 |
| MS.gene85625.t1 | MTR_1g016050 | 59.109 | 247 | 100 | 1 | 37 | 283 | 8 | 253 | 1.67e-104 | 306 |
| MS.gene85625.t1 | MTR_4g126050 | 64.039 | 203 | 70 | 3 | 4 | 206 | 37 | 236 | 6.10e-87 | 260 |
| MS.gene85625.t1 | MTR_1g016060 | 43.407 | 182 | 82 | 2 | 112 | 292 | 467 | 628 | 3.84e-34 | 131 |
| MS.gene85625.t1 | MTR_2g039550 | 67.391 | 92 | 6 | 1 | 10 | 101 | 3 | 70 | 4.37e-33 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85625.t1 | AT3G47590 | 63.707 | 259 | 91 | 2 | 31 | 289 | 53 | 308 | 2.75e-120 | 347 |
| MS.gene85625.t1 | AT1G29840 | 60.000 | 265 | 103 | 2 | 25 | 289 | 50 | 311 | 8.30e-116 | 336 |
| MS.gene85625.t1 | AT3G47560 | 57.692 | 286 | 107 | 5 | 6 | 283 | 10 | 289 | 1.33e-113 | 330 |
| MS.gene85625.t1 | AT3G47560 | 61.004 | 259 | 95 | 3 | 25 | 283 | 1 | 253 | 2.19e-113 | 328 |
| MS.gene85625.t1 | AT5G11910 | 58.088 | 272 | 110 | 2 | 12 | 283 | 18 | 285 | 6.50e-112 | 326 |
| MS.gene85625.t1 | AT5G11910 | 58.148 | 270 | 109 | 2 | 14 | 283 | 2 | 267 | 1.53e-111 | 325 |
| MS.gene85625.t1 | AT3G47560 | 55.830 | 283 | 97 | 3 | 25 | 283 | 1 | 279 | 1.72e-109 | 319 |
| MS.gene85625.t1 | AT3G47560 | 55.245 | 286 | 95 | 4 | 25 | 283 | 1 | 280 | 9.37e-107 | 312 |
| MS.gene85625.t1 | AT3G47560 | 50.968 | 310 | 97 | 4 | 25 | 283 | 1 | 306 | 6.18e-103 | 303 |
| MS.gene85625.t1 | AT2G19550 | 55.906 | 254 | 102 | 6 | 38 | 286 | 5 | 253 | 7.49e-97 | 288 |
| MS.gene85625.t1 | AT3G47590 | 65.432 | 162 | 55 | 1 | 31 | 192 | 53 | 213 | 9.24e-74 | 226 |
| MS.gene85625.t1 | AT5G11910 | 58.182 | 165 | 65 | 2 | 12 | 176 | 18 | 178 | 1.99e-60 | 190 |
| MS.gene85625.t1 | AT5G11910 | 57.669 | 163 | 65 | 2 | 14 | 176 | 2 | 160 | 7.81e-60 | 188 |
Find 54 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGCCTTGGTAAAGATTATT+TGG | 0.161587 | 2.1:-48348324 | MS.gene85625:CDS |
| TGTTACTCATGAAAGTTTAA+TGG | 0.222591 | 2.1:-48348019 | MS.gene85625:CDS |
| CGTTCCAGTATGGTAACTAT+TGG | 0.315195 | 2.1:-48349439 | MS.gene85625:CDS |
| GGAAACCATTGACCACAATA+AGG | 0.339836 | 2.1:-48347654 | MS.gene85625:CDS |
| TTCTGAATATTCCGTTGTTT+AGG | 0.343707 | 2.1:-48351657 | MS.gene85625:CDS |
| ATGTACTGTTGCAGGAAGTT+TGG | 0.345526 | 2.1:-48348049 | MS.gene85625:intron |
| GTTCCAGTATGGTAACTATT+GGG | 0.346161 | 2.1:-48349438 | MS.gene85625:CDS |
| CGTGTAATCCGTGCAATTGT+TGG | 0.348094 | 2.1:-48349365 | MS.gene85625:CDS |
| ATACACACTCTCACACTCTA+AGG | 0.355067 | 2.1:-48351630 | MS.gene85625:CDS |
| ATGATATGCAACTTGTGATT+TGG | 0.362877 | 2.1:+48347746 | None:intergenic |
| CTCTGGACGTTATGATCTTA+AGG | 0.406623 | 2.1:-48348360 | MS.gene85625:CDS |
| AACTCGTGCGCACTTTGAAC+GGG | 0.413947 | 2.1:+48347782 | None:intergenic |
| GTTGAACCTTGTTGCTGCAT+TGG | 0.422568 | 2.1:-48351230 | MS.gene85625:CDS |
| AGTACCCTTATTGTGGTCAA+TGG | 0.432514 | 2.1:+48347649 | None:intergenic |
| ATTGATGTGAAGACGAAGTC+AGG | 0.444727 | 2.1:-48348278 | MS.gene85625:intron |
| AGCGAAGGTTCGTTCCAGTA+TGG | 0.446124 | 2.1:-48349449 | MS.gene85625:CDS |
| AAAACTGTTGTCAACCTCTC+TGG | 0.459812 | 2.1:-48348377 | MS.gene85625:CDS |
| TGCATTCTTTGTCAATCTGC+AGG | 0.462188 | 2.1:+48347965 | None:intergenic |
| GGATTACACGATTTGATTCA+CGG | 0.464996 | 2.1:+48349378 | None:intergenic |
| GGCAGGATCCTTACAGTTCA+CGG | 0.472167 | 2.1:-48347824 | MS.gene85625:intron |
| GAACACTATCTCAAAGTCAA+TGG | 0.475768 | 2.1:-48351608 | MS.gene85625:CDS |
| GAAACCATTGACCACAATAA+GGG | 0.482098 | 2.1:-48347653 | MS.gene85625:CDS |
| TTGGAAAGAATTACGAATGA+GGG | 0.484481 | 2.1:-48348305 | MS.gene85625:CDS |
| CCTTGTTGCTGCATTGGAAA+AGG | 0.484553 | 2.1:-48351224 | MS.gene85625:CDS |
| CTCCCCAATAGTTACCATAC+TGG | 0.488293 | 2.1:+48349435 | None:intergenic |
| AAACTCGTGCGCACTTTGAA+CGG | 0.492795 | 2.1:+48347781 | None:intergenic |
| AACAAGGTTCAACATGAGAT+TGG | 0.492861 | 2.1:+48351240 | None:intergenic |
| CAATAAGGGTACTGTTAGCT+AGG | 0.496770 | 2.1:-48347639 | None:intergenic |
| GACATTGTTATCTTATGTCA+TGG | 0.499984 | 2.1:-48351379 | MS.gene85625:CDS |
| TACTATGTCCAACAATTGCA+CGG | 0.505039 | 2.1:+48349357 | None:intergenic |
| CAGAAGAACCGTGAACTGTA+AGG | 0.509365 | 2.1:+48347816 | None:intergenic |
| TTTGGAAAGAATTACGAATG+AGG | 0.521449 | 2.1:-48348306 | MS.gene85625:CDS |
| AGTTGTTATGAGCTTCATCA+AGG | 0.533763 | 2.1:-48347675 | MS.gene85625:CDS |
| TGAAAGTTTAATGGATCGCA+TGG | 0.535796 | 2.1:-48348010 | MS.gene85625:CDS |
| GCAATTGTTGGACATAGTAA+AGG | 0.544207 | 2.1:-48349353 | MS.gene85625:intron |
| GGACGTTATGATCTTAAGGC+AGG | 0.563242 | 2.1:-48348356 | MS.gene85625:CDS |
| GTTGGTATATTACTTGAATG+TGG | 0.574389 | 2.1:-48351412 | MS.gene85625:CDS |
| AAGTGCGCACGAGTTTGCTA+AGG | 0.575019 | 2.1:-48347774 | MS.gene85625:CDS |
| TTTCCAAATAATCTTTACCA+AGG | 0.575682 | 2.1:+48348321 | None:intergenic |
| GGTATTATCACTCTCTGATG+AGG | 0.579146 | 2.1:+48351457 | None:intergenic |
| ACATAAGATAACAATGTCGT+TGG | 0.580798 | 2.1:+48351384 | None:intergenic |
| TGCAGATTGACAAAGAATGC+AGG | 0.585351 | 2.1:-48347963 | MS.gene85625:intron |
| GCAGGCATCGAAGAACGCCT+TGG | 0.591925 | 2.1:-48348338 | MS.gene85625:CDS |
| TTCCAGTATGGTAACTATTG+GGG | 0.594109 | 2.1:-48349437 | MS.gene85625:CDS |
| TGGTAACTATTGGGGAGAGG+TGG | 0.607132 | 2.1:-48349429 | MS.gene85625:CDS |
| GTATGGTAACTATTGGGGAG+AGG | 0.614685 | 2.1:-48349432 | MS.gene85625:CDS |
| AGCTAACAGTACCCTTATTG+TGG | 0.617553 | 2.1:+48347642 | None:intergenic |
| GTGATAATACCCAACAAGCG+CGG | 0.627473 | 2.1:-48351445 | MS.gene85625:CDS |
| ACTCGTGCGCACTTTGAACG+GGG | 0.650817 | 2.1:+48347783 | None:intergenic |
| TTACCTTCCAGGGAAAGCGA+AGG | 0.669336 | 2.1:-48349464 | MS.gene85625:intron |
| GATGAAGCTCATAACAACTG+AGG | 0.686040 | 2.1:+48347679 | None:intergenic |
| TGTGTATTTGACCTAAACAA+CGG | 0.692621 | 2.1:+48351646 | None:intergenic |
| TAAGATCATAACGTCCAGAG+AGG | 0.711327 | 2.1:+48348363 | None:intergenic |
| TTAAACTTTCATGAGTAACA+CGG | 0.711846 | 2.1:+48348022 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACCAAAATAAAATTATTATA+AGG | + | chr2.1:48349642-48349661 | None:intergenic | 10.0% |
| !!! | TCCTTATAATAATTTTATTT+TGG | - | chr2.1:48349638-48349657 | MS.gene85625:intron | 10.0% |
| !!! | TGATTATTTTTTTGTATATT+AGG | - | chr2.1:48348035-48348054 | MS.gene85625:CDS | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr2.1:48350179-48350198 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+TGG | + | chr2.1:48350179-48350198 | None:intergenic | 100.0% |
| !! | AATAATCAATGAAAATAATC+TGG | + | chr2.1:48348023-48348042 | None:intergenic | 15.0% |
| !! | AATAGAATATTAACTCAATA+TGG | + | chr2.1:48348174-48348193 | None:intergenic | 15.0% |
| !! | GATCAATTAAAATCAATAAA+TGG | + | chr2.1:48348249-48348268 | None:intergenic | 15.0% |
| !! | TATGAAAAAAAATGTATATC+TGG | - | chr2.1:48349991-48350010 | MS.gene85625:intron | 15.0% |
| !!! | AATTTTATTTTGGTATTAGT+TGG | - | chr2.1:48349648-48349667 | MS.gene85625:intron | 15.0% |
| !!! | ATATTCTATTTTACTATGTT+TGG | - | chr2.1:48348184-48348203 | MS.gene85625:intron | 15.0% |
| !!! | ATTAGTTTATCAAAAAGAAA+TGG | + | chr2.1:48351408-48351427 | None:intergenic | 15.0% |
| !! | ACTAATCTCATTTATAAGTT+TGG | + | chr2.1:48350646-48350665 | None:intergenic | 20.0% |
| !! | ATACCAAATTACATCATATA+TGG | - | chr2.1:48351456-48351475 | MS.gene85625:CDS | 20.0% |
| !! | ATACTTAAGTCGAAATAAAA+AGG | + | chr2.1:48347978-48347997 | None:intergenic | 20.0% |
| !! | TTGATGAATATGAATGAAAT+GGG | + | chr2.1:48348733-48348752 | None:intergenic | 20.0% |
| !! | TTTGATGAATATGAATGAAA+TGG | + | chr2.1:48348734-48348753 | None:intergenic | 20.0% |
| !!! | AGTTTTAATGTCATGATATT+TGG | + | chr2.1:48350910-48350929 | None:intergenic | 20.0% |
| !!! | TTCTAGTCTTTTAAATAATG+TGG | + | chr2.1:48350269-48350288 | None:intergenic | 20.0% |
| ! | AAGCTGAGAAATATAGAAAA+TGG | - | chr2.1:48348325-48348344 | MS.gene85625:CDS | 25.0% |
| ! | AGAAATTACTCTTACAATAG+TGG | - | chr2.1:48349556-48349575 | MS.gene85625:intron | 25.0% |
| ! | AGTCGAAATAAAAAGGAAAA+AGG | + | chr2.1:48347971-48347990 | None:intergenic | 25.0% |
| ! | ATAAGTTTGGATAGGAAATT+AGG | + | chr2.1:48350633-48350652 | None:intergenic | 25.0% |
| ! | GAAAAATTAAGGTTAAGGAT+TGG | + | chr2.1:48350334-48350353 | None:intergenic | 25.0% |
| ! | GTCTATTAAATGATCATTTG+AGG | - | chr2.1:48351227-48351246 | MS.gene85625:CDS | 25.0% |
| ! | TAATTGAAATAGTGTGTTTC+TGG | - | chr2.1:48349469-48349488 | MS.gene85625:intron | 25.0% |
| ! | TCTCATTTATAAGTTTGGAT+AGG | + | chr2.1:48350641-48350660 | None:intergenic | 25.0% |
| ! | TGTTACTCATGAAAGTTTAA+TGG | - | chr2.1:48351282-48351301 | MS.gene85625:intron | 25.0% |
| ! | TTAAACTTTCATGAGTAACA+CGG | + | chr2.1:48351282-48351301 | None:intergenic | 25.0% |
| ! | TTTCCAAATAATCTTTACCA+AGG | + | chr2.1:48350983-48351002 | None:intergenic | 25.0% |
| !! | AAATTTTCAACGGAATCAAA+GGG | - | chr2.1:48350082-48350101 | MS.gene85625:intron | 25.0% |
| !! | AACAAAAGAATTTGAGATGA+TGG | + | chr2.1:48350797-48350816 | None:intergenic | 25.0% |
| !! | CAATAGTTTGATTCAGTTTT+TGG | + | chr2.1:48348409-48348428 | None:intergenic | 25.0% |
| !! | CATCTTTTTCTTTTCTTTTC+TGG | + | chr2.1:48349090-48349109 | None:intergenic | 25.0% |
| ACAATTATGTTCAGTGCATT+TGG | + | chr2.1:48350110-48350129 | None:intergenic | 30.0% | |
| ACATAAGATAACAATGTCGT+TGG | + | chr2.1:48347920-48347939 | None:intergenic | 30.0% | |
| AGAATGAATTGAACCCAAAT+TGG | - | chr2.1:48348530-48348549 | MS.gene85625:intron | 30.0% | |
| AGCTAAGGAGAGAAAAATTA+AGG | + | chr2.1:48350345-48350364 | None:intergenic | 30.0% | |
| ATAATGATCAAGCACATATC+TGG | + | chr2.1:48350711-48350730 | None:intergenic | 30.0% | |
| ATGATATGCAACTTGTGATT+TGG | + | chr2.1:48351558-48351577 | None:intergenic | 30.0% | |
| CAAATTACATCATATATGGC+AGG | - | chr2.1:48351460-48351479 | MS.gene85625:CDS | 30.0% | |
| CAATCGTAACATCTAATTCA+GGG | + | chr2.1:48350516-48350535 | None:intergenic | 30.0% | |
| CAATGAAAATAATCTGGCAA+AGG | + | chr2.1:48348017-48348036 | None:intergenic | 30.0% | |
| CAATGAATTTGGTCCAATTT+GGG | + | chr2.1:48348546-48348565 | None:intergenic | 30.0% | |
| CATATTCATCCATCTATTGA+AGG | + | chr2.1:48349431-48349450 | None:intergenic | 30.0% | |
| CTGCCATATATGATGTAATT+TGG | + | chr2.1:48351462-48351481 | None:intergenic | 30.0% | |
| GACATTGTTATCTTATGTCA+TGG | - | chr2.1:48347922-48347941 | MS.gene85625:intron | 30.0% | |
| GATTATATGTGTCTTGACTT+TGG | - | chr2.1:48350020-48350039 | MS.gene85625:intron | 30.0% | |
| GGAGAGAAAAATTAAGGTTA+AGG | + | chr2.1:48350339-48350358 | None:intergenic | 30.0% | |
| GTAAATTTGTCTAGACTGAT+TGG | - | chr2.1:48350824-48350843 | MS.gene85625:intron | 30.0% | |
| GTTGGTATATTACTTGAATG+TGG | - | chr2.1:48347889-48347908 | MS.gene85625:intron | 30.0% | |
| TATGTTTGGATGTATAGAGA+TGG | - | chr2.1:48348198-48348217 | MS.gene85625:intron | 30.0% | |
| TCAATTGGATAGGTGTATTT+GGG | + | chr2.1:48350233-48350252 | None:intergenic | 30.0% | |
| TCTTCATATTGCATCAATCA+AGG | + | chr2.1:48350542-48350561 | None:intergenic | 30.0% | |
| TGAAAATTTCAGTGATGGTT+TGG | + | chr2.1:48350071-48350090 | None:intergenic | 30.0% | |
| TGAATGTAGAAATTTGTGAC+AGG | - | chr2.1:48349393-48349412 | MS.gene85625:CDS | 30.0% | |
| TGGTTCAAACTATTGCATTA+TGG | - | chr2.1:48349182-48349201 | MS.gene85625:intron | 30.0% | |
| TGTGTATTTGACCTAAACAA+CGG | + | chr2.1:48347658-48347677 | None:intergenic | 30.0% | |
| TTCTGAATATTCCGTTGTTT+AGG | - | chr2.1:48347644-48347663 | MS.gene85625:CDS | 30.0% | |
| TTGGAAAGAATTACGAATGA+GGG | - | chr2.1:48350996-48351015 | MS.gene85625:intron | 30.0% | |
| TTTATTAGATTTCAGACCCA+TGG | - | chr2.1:48349016-48349035 | MS.gene85625:intron | 30.0% | |
| TTTGGAAAGAATTACGAATG+AGG | - | chr2.1:48350995-48351014 | MS.gene85625:intron | 30.0% | |
| ! | AACAGTTCACGTCATAATTT+TGG | + | chr2.1:48350469-48350488 | None:intergenic | 30.0% |
| ! | ACCATCACTGAAATTTTCAA+CGG | - | chr2.1:48350072-48350091 | MS.gene85625:intron | 30.0% |
| ! | ATCTCTTCTCCTTTTACTTT+TGG | - | chr2.1:48351380-48351399 | MS.gene85625:CDS | 30.0% |
| ! | GAAATTTTCAACGGAATCAA+AGG | - | chr2.1:48350081-48350100 | MS.gene85625:intron | 30.0% |
| ! | GTTCTTTGTTTCAATCTATG+TGG | - | chr2.1:48351179-48351198 | MS.gene85625:intron | 30.0% |
| ! | TCAATTTCATATGCCTTTTG+AGG | - | chr2.1:48348761-48348780 | MS.gene85625:intron | 30.0% |
| !! | AAGAATTTGAGATGATGGAT+TGG | + | chr2.1:48350792-48350811 | None:intergenic | 30.0% |
| !! | ACGTCATAATTTTGGTGTAT+GGG | + | chr2.1:48350461-48350480 | None:intergenic | 30.0% |
| !! | ATGGATTCTACAATTTTGAC+AGG | - | chr2.1:48347712-48347731 | MS.gene85625:CDS | 30.0% |
| !! | TATGTTTTAAGCACACCAAA+CGG | + | chr2.1:48349311-48349330 | None:intergenic | 30.0% |
| !! | TTTCTCTTAACTTTAGCTTG+CGG | - | chr2.1:48349812-48349831 | MS.gene85625:intron | 30.0% |
| !! | TTTTGAAAACCAGTTCAGTT+TGG | - | chr2.1:48349162-48349181 | MS.gene85625:intron | 30.0% |
| !!! | CAGTTTTGAACTTTTACACA+CGG | + | chr2.1:48348449-48348468 | None:intergenic | 30.0% |
| !!! | TCTGGTTTTTATGTGTGTTT+CGG | - | chr2.1:48348801-48348820 | MS.gene85625:intron | 30.0% |
| !!! | TCTTTTCGTTTTGACTTTTC+TGG | - | chr2.1:48348111-48348130 | MS.gene85625:intron | 30.0% |
| AACAAGGTTCAACATGAGAT+TGG | + | chr2.1:48348064-48348083 | None:intergenic | 35.0% | |
| AATACCATCCAATTTACACC+AGG | + | chr2.1:48349715-48349734 | None:intergenic | 35.0% | |
| ACGCCTTGGTAAAGATTATT+TGG | - | chr2.1:48350977-48350996 | MS.gene85625:intron | 35.0% | |
| AGGAATGAATCATGCTTTGT+AGG | + | chr2.1:48348594-48348613 | None:intergenic | 35.0% | |
| ATAGGTGTATTTGGGTAGAT+GGG | + | chr2.1:48350225-48350244 | None:intergenic | 35.0% | |
| ATATGTGTCTTGACTTTGGT+TGG | - | chr2.1:48350024-48350043 | MS.gene85625:intron | 35.0% | |
| ATGACAGAACAGAAGCTATT+GGG | - | chr2.1:48348863-48348882 | MS.gene85625:intron | 35.0% | |
| ATTGACAAAGAATGCAGGTT+AGG | - | chr2.1:48351343-48351362 | MS.gene85625:intron | 35.0% | |
| CTCAATTGGATAGGTGTATT+TGG | + | chr2.1:48350234-48350253 | None:intergenic | 35.0% | |
| GAAACCATTGACCACAATAA+GGG | - | chr2.1:48351648-48351667 | MS.gene85625:CDS | 35.0% | |
| GAAATGGAGCCAAAAGTAAA+AGG | + | chr2.1:48351392-48351411 | None:intergenic | 35.0% | |
| GAACACTATCTCAAAGTCAA+TGG | - | chr2.1:48347693-48347712 | MS.gene85625:CDS | 35.0% | |
| GAACTACACTGCAAATAGAT+AGG | - | chr2.1:48348298-48348317 | MS.gene85625:CDS | 35.0% | |
| GAAGAGAGTTGTGTAATTTC+TGG | - | chr2.1:48350557-48350576 | MS.gene85625:intron | 35.0% | |
| GATACATGTATTCTCAGTAG+GGG | - | chr2.1:48348371-48348390 | MS.gene85625:CDS | 35.0% | |
| GCAATCGTAACATCTAATTC+AGG | + | chr2.1:48350517-48350536 | None:intergenic | 35.0% | |
| GCAATGAATTTGGTCCAATT+TGG | + | chr2.1:48348547-48348566 | None:intergenic | 35.0% | |
| GCAATTGTTGGACATAGTAA+AGG | - | chr2.1:48349948-48349967 | MS.gene85625:intron | 35.0% | |
| GGATACATGTATTCTCAGTA+GGG | - | chr2.1:48348370-48348389 | MS.gene85625:CDS | 35.0% | |
| GGATTACACGATTTGATTCA+CGG | + | chr2.1:48349926-48349945 | None:intergenic | 35.0% | |
| GGATTTCAGAAAGACTCAAT+TGG | + | chr2.1:48350248-48350267 | None:intergenic | 35.0% | |
| GTTCCAGTATGGTAACTATT+GGG | - | chr2.1:48349863-48349882 | MS.gene85625:intron | 35.0% | |
| TACTATGTCCAACAATTGCA+CGG | + | chr2.1:48349947-48349966 | None:intergenic | 35.0% | |
| TAGTTTGAACCAAACTGAAC+TGG | + | chr2.1:48349174-48349193 | None:intergenic | 35.0% | |
| TATGAATGAAATGGGTACCT+CGG | + | chr2.1:48348725-48348744 | None:intergenic | 35.0% | |
| TCAGAAAGACTCAATTGGAT+AGG | + | chr2.1:48350243-48350262 | None:intergenic | 35.0% | |
| TCCGTTGAAAATTTCAGTGA+TGG | + | chr2.1:48350076-48350095 | None:intergenic | 35.0% | |
| TGTATCCGTCCAAACATAAA+TGG | + | chr2.1:48348357-48348376 | None:intergenic | 35.0% | |
| TTCCAGTATGGTAACTATTG+GGG | - | chr2.1:48349864-48349883 | MS.gene85625:intron | 35.0% | |
| TTGACAAAGAATGCAGGTTA+GGG | - | chr2.1:48351344-48351363 | MS.gene85625:intron | 35.0% | |
| TTGGAGAAGAGTTATTCCAA+TGG | + | chr2.1:48350315-48350334 | None:intergenic | 35.0% | |
| TTTCTTTGCCTGGTGTAAAT+TGG | - | chr2.1:48349704-48349723 | MS.gene85625:intron | 35.0% | |
| ! | TCATTCACTATTTCTTTGCC+TGG | - | chr2.1:48349694-48349713 | MS.gene85625:intron | 35.0% |
| ! | TGAAAGTTTAATGGATCGCA+TGG | - | chr2.1:48351291-48351310 | MS.gene85625:intron | 35.0% |
| !! | ATGTTTTAAGCACACCAAAC+GGG | + | chr2.1:48349310-48349329 | None:intergenic | 35.0% |
| !! | CAAACATTTTTGACTGCACA+TGG | + | chr2.1:48348271-48348290 | None:intergenic | 35.0% |
| !! | CACGTCATAATTTTGGTGTA+TGG | + | chr2.1:48350462-48350481 | None:intergenic | 35.0% |
| !! | CGTCATAATTTTGGTGTATG+GGG | + | chr2.1:48350460-48350479 | None:intergenic | 35.0% |
| !! | GTTCAGTTTTGACACAGTTT+TGG | - | chr2.1:48349209-48349228 | MS.gene85625:intron | 35.0% |
| !! | TCATGCTTTGTAGGTTTTGT+TGG | + | chr2.1:48348585-48348604 | None:intergenic | 35.0% |
| !! | TTCACATTGACTCATTGACA+CGG | - | chr2.1:48349345-48349364 | MS.gene85625:intron | 35.0% |
| !! | TTCTCTTAACTTTAGCTTGC+GGG | - | chr2.1:48349813-48349832 | MS.gene85625:intron | 35.0% |
| !!! | CGTTTTGACTTTTCTGGAAA+CGG | - | chr2.1:48348117-48348136 | MS.gene85625:intron | 35.0% |
| !!! | CTCTCATTTGTTTTTGTAGC+TGG | - | chr2.1:48347817-48347836 | MS.gene85625:CDS | 35.0% |
| !!! | GTTTTGACTTTTCTGGAAAC+GGG | - | chr2.1:48348118-48348137 | MS.gene85625:intron | 35.0% |
| AAAACTGTTGTCAACCTCTC+TGG | - | chr2.1:48350924-48350943 | MS.gene85625:intron | 40.0% | |
| AGCTAACAGTACCCTTATTG+TGG | + | chr2.1:48351662-48351681 | None:intergenic | 40.0% | |
| AGTACCCTTATTGTGGTCAA+TGG | + | chr2.1:48351655-48351674 | None:intergenic | 40.0% | |
| ATACACACTCTCACACTCTA+AGG | - | chr2.1:48347671-48347690 | MS.gene85625:CDS | 40.0% | |
| ATGTACTGTTGCAGGAAGTT+TGG | - | chr2.1:48351252-48351271 | MS.gene85625:intron | 40.0% | |
| ATTGATGTGAAGACGAAGTC+AGG | - | chr2.1:48351023-48351042 | MS.gene85625:intron | 40.0% | |
| CATAGCTAGCAATGAAGACA+AGG | + | chr2.1:48349779-48349798 | None:intergenic | 40.0% | |
| CATGACAGAACAGAAGCTAT+TGG | - | chr2.1:48348862-48348881 | MS.gene85625:intron | 40.0% | |
| CCTAACGATCCTGAGAATTA+GGG | + | chr2.1:48349256-48349275 | None:intergenic | 40.0% | |
| CGGATACATGTATTCTCAGT+AGG | - | chr2.1:48348369-48348388 | MS.gene85625:CDS | 40.0% | |
| CGTTCCAGTATGGTAACTAT+TGG | - | chr2.1:48349862-48349881 | MS.gene85625:intron | 40.0% | |
| CTCTGGACGTTATGATCTTA+AGG | - | chr2.1:48350941-48350960 | MS.gene85625:intron | 40.0% | |
| GATAGGTGTATTTGGGTAGA+TGG | + | chr2.1:48350226-48350245 | None:intergenic | 40.0% | |
| GCTGTTTGATGCGATTTCTT+TGG | - | chr2.1:48349491-48349510 | MS.gene85625:intron | 40.0% | |
| GGAAACCATTGACCACAATA+AGG | - | chr2.1:48351647-48351666 | MS.gene85625:CDS | 40.0% | |
| GGAACAAAAACCAAACAGCA+AGG | + | chr2.1:48349048-48349067 | None:intergenic | 40.0% | |
| GGTATTATCACTCTCTGATG+AGG | + | chr2.1:48347847-48347866 | None:intergenic | 40.0% | |
| GTCAATGTGAATGTCAACAC+AGG | + | chr2.1:48349336-48349355 | None:intergenic | 40.0% | |
| TAAGATCATAACGTCCAGAG+AGG | + | chr2.1:48350941-48350960 | None:intergenic | 40.0% | |
| TAGGTGTATTTGGGTAGATG+GGG | + | chr2.1:48350224-48350243 | None:intergenic | 40.0% | |
| TCCTAACGATCCTGAGAATT+AGG | + | chr2.1:48349257-48349276 | None:intergenic | 40.0% | |
| TCGCAAGAGAGCAATGAATT+TGG | + | chr2.1:48348557-48348576 | None:intergenic | 40.0% | |
| TGACAAAGAATGCAGGTTAG+GGG | - | chr2.1:48351345-48351364 | MS.gene85625:intron | 40.0% | |
| TGACAGAACAGAAGCTATTG+GGG | - | chr2.1:48348864-48348883 | MS.gene85625:intron | 40.0% | |
| TGCAGATTGACAAAGAATGC+AGG | - | chr2.1:48351338-48351357 | MS.gene85625:intron | 40.0% | |
| TGCATTCTTTGTCAATCTGC+AGG | + | chr2.1:48351339-48351358 | None:intergenic | 40.0% | |
| TTTATGTGTGTTTCGGCTGT+GGG | - | chr2.1:48348808-48348827 | MS.gene85625:intron | 40.0% | |
| TTTGCCTGGTGTAAATTGGA+TGG | - | chr2.1:48349708-48349727 | MS.gene85625:intron | 40.0% | |
| ! | ATAGCTAGGGGCTTGAATTT+TGG | - | chr2.1:48348988-48349007 | MS.gene85625:intron | 40.0% |
| ! | ATTGGTTTAGGCATAGCTAG+GGG | - | chr2.1:48348976-48348995 | MS.gene85625:intron | 40.0% |
| ! | CACCAGCAACACTCTATTTT+GGG | + | chr2.1:48350426-48350445 | None:intergenic | 40.0% |
| ! | CCATGCCATTTATGTTTGGA+CGG | - | chr2.1:48348349-48348368 | MS.gene85625:CDS | 40.0% |
| ! | CTTTTACACACGGTTCAGTT+TGG | + | chr2.1:48348439-48348458 | None:intergenic | 40.0% |
| ! | TATCTGGCACGGTTTTACAA+AGG | + | chr2.1:48350695-48350714 | None:intergenic | 40.0% |
| ! | TGGACCATGCCATTTATGTT+TGG | - | chr2.1:48348345-48348364 | MS.gene85625:CDS | 40.0% |
| ! | TTTTATGTGTGTTTCGGCTG+TGG | - | chr2.1:48348807-48348826 | MS.gene85625:intron | 40.0% |
| !! | ACACTCAGTCATTTTGCCAT+TGG | - | chr2.1:48350296-48350315 | MS.gene85625:intron | 40.0% |
| !! | GATTGGTTTAGGCATAGCTA+GGG | - | chr2.1:48348975-48348994 | MS.gene85625:intron | 40.0% |
| !!! | CAGTAGCTGTTTTCTGGTTT+GGG | - | chr2.1:48348931-48348950 | MS.gene85625:intron | 40.0% |
| !!! | GCTTTGTAGGTTTTGTTGGA+TGG | + | chr2.1:48348581-48348600 | None:intergenic | 40.0% |
| AAACTCGTGCGCACTTTGAA+CGG | + | chr2.1:48351523-48351542 | None:intergenic | 45.0% | |
| ACATGTATTCTCAGTAGGGG+TGG | - | chr2.1:48348374-48348393 | MS.gene85625:CDS | 45.0% | |
| ACGATCCTGAGAATTAGGGA+TGG | + | chr2.1:48349252-48349271 | None:intergenic | 45.0% | |
| ACTTTGAACTTGTGCCCGTT+TGG | - | chr2.1:48349293-48349312 | MS.gene85625:intron | 45.0% | |
| AGCAACAGCGTTACCTCAAA+AGG | + | chr2.1:48348777-48348796 | None:intergenic | 45.0% | |
| AGGTGTATTTGGGTAGATGG+GGG | + | chr2.1:48350223-48350242 | None:intergenic | 45.0% | |
| CAGAAGAACCGTGAACTGTA+AGG | + | chr2.1:48351488-48351507 | None:intergenic | 45.0% | |
| CAGGCTGTACATAGTAGCTA+AGG | + | chr2.1:48350360-48350379 | None:intergenic | 45.0% | |
| CATGTATTCTCAGTAGGGGT+GGG | - | chr2.1:48348375-48348394 | MS.gene85625:CDS | 45.0% | |
| CCCTAATTCTCAGGATCGTT+AGG | - | chr2.1:48349253-48349272 | MS.gene85625:intron | 45.0% | |
| CCGTCCAAACATAAATGGCA+TGG | + | chr2.1:48348352-48348371 | None:intergenic | 45.0% | |
| CCTTGTTGCTGCATTGGAAA+AGG | - | chr2.1:48348077-48348096 | MS.gene85625:intron | 45.0% | |
| CGATCCTGAGAATTAGGGAT+GGG | + | chr2.1:48349251-48349270 | None:intergenic | 45.0% | |
| CGTGTAATCCGTGCAATTGT+TGG | - | chr2.1:48349936-48349955 | MS.gene85625:intron | 45.0% | |
| CTCCCCAATAGTTACCATAC+TGG | + | chr2.1:48349869-48349888 | None:intergenic | 45.0% | |
| CTGCACATGCCTTCAATAGA+TGG | - | chr2.1:48349419-48349438 | MS.gene85625:CDS | 45.0% | |
| GACTGAAAGACAGTGTTAGC+AGG | + | chr2.1:48350379-48350398 | None:intergenic | 45.0% | |
| GATCAAGCACATATCTGGCA+CGG | + | chr2.1:48350706-48350725 | None:intergenic | 45.0% | |
| GCAGTGGAGATGAATCACTA+CGG | + | chr2.1:48348695-48348714 | None:intergenic | 45.0% | |
| GGACGTTATGATCTTAAGGC+AGG | - | chr2.1:48350945-48350964 | MS.gene85625:intron | 45.0% | |
| GGTGATAGAGAAAGCAAGAC+AGG | + | chr2.1:48349069-48349088 | None:intergenic | 45.0% | |
| GTATGGTAACTATTGGGGAG+AGG | - | chr2.1:48349869-48349888 | MS.gene85625:intron | 45.0% | |
| GTGATAATACCCAACAAGCG+CGG | - | chr2.1:48347856-48347875 | MS.gene85625:intron | 45.0% | |
| GTTGAACCTTGTTGCTGCAT+TGG | - | chr2.1:48348071-48348090 | MS.gene85625:intron | 45.0% | |
| TGACCGGAGATGAATCGTTA+CGG | + | chr2.1:48348631-48348650 | None:intergenic | 45.0% | |
| TGGAGATGAATCACTACGGA+GGG | + | chr2.1:48348691-48348710 | None:intergenic | 45.0% | |
| TTATGTGTGTTTCGGCTGTG+GGG | - | chr2.1:48348809-48348828 | MS.gene85625:intron | 45.0% | |
| TTGAGGACATGTACTGTTGC+AGG | - | chr2.1:48351244-48351263 | MS.gene85625:CDS | 45.0% | |
| TTTGCCCATCCCTAATTCTC+AGG | - | chr2.1:48349244-48349263 | MS.gene85625:intron | 45.0% | |
| ! | CCTTTTCCAATGCAGCAACA+AGG | + | chr2.1:48348080-48348099 | None:intergenic | 45.0% |
| ! | GCACCAGCAACACTCTATTT+TGG | + | chr2.1:48350427-48350446 | None:intergenic | 45.0% |
| !! | CAGCAACACTCTATTTTGGG+AGG | + | chr2.1:48350423-48350442 | None:intergenic | 45.0% |
| !! | CTCCCAAAATAGAGTGTTGC+TGG | - | chr2.1:48350421-48350440 | MS.gene85625:intron | 45.0% |
| !! | GCATCTGTGTGTTGGTGTTT+TGG | - | chr2.1:48348905-48348924 | MS.gene85625:intron | 45.0% |
| !! | GGATTGGTTTAGGCATAGCT+AGG | - | chr2.1:48348974-48348993 | MS.gene85625:intron | 45.0% |
| !! | TTGTTTCTGTGTCGTGATGC+AGG | - | chr2.1:48350858-48350877 | MS.gene85625:intron | 45.0% |
| !!! | GCAGTAGCTGTTTTCTGGTT+TGG | - | chr2.1:48348930-48348949 | MS.gene85625:intron | 45.0% |
| AAACAGCAAGGCAACAGCCA+TGG | + | chr2.1:48349036-48349055 | None:intergenic | 50.0% | |
| AACAGCAAGGCAACAGCCAT+GGG | + | chr2.1:48349035-48349054 | None:intergenic | 50.0% | |
| AACTCGTGCGCACTTTGAAC+GGG | + | chr2.1:48351522-48351541 | None:intergenic | 50.0% | |
| AGCGAAGGTTCGTTCCAGTA+TGG | - | chr2.1:48349852-48349871 | MS.gene85625:intron | 50.0% | |
| AGTCCTCCACCATCTAACCA+AGG | - | chr2.1:48350395-48350414 | MS.gene85625:intron | 50.0% | |
| CCTCCGTAACGATTCATCTC+CGG | - | chr2.1:48348625-48348644 | MS.gene85625:intron | 50.0% | |
| CGGAGATGAATCGTTACGGA+GGG | + | chr2.1:48348627-48348646 | None:intergenic | 50.0% | |
| GAATCGTTACGGAGGGATCA+AGG | + | chr2.1:48348620-48348639 | None:intergenic | 50.0% | |
| GGCAGGATCCTTACAGTTCA+CGG | - | chr2.1:48351477-48351496 | MS.gene85625:intron | 50.0% | |
| GGTGTATTTGGGTAGATGGG+GGG | + | chr2.1:48350222-48350241 | None:intergenic | 50.0% | |
| GTCCTCCACCATCTAACCAA+GGG | - | chr2.1:48350396-48350415 | MS.gene85625:intron | 50.0% | |
| GTGGAGATGAATCACTACGG+AGG | + | chr2.1:48348692-48348711 | None:intergenic | 50.0% | |
| GTGTATTTGGGTAGATGGGG+GGG | + | chr2.1:48350221-48350240 | None:intergenic | 50.0% | |
| TCAGCTGTGCATCTGTGTGT+TGG | - | chr2.1:48348897-48348916 | MS.gene85625:intron | 50.0% | |
| TGGTAACTATTGGGGAGAGG+TGG | - | chr2.1:48349872-48349891 | MS.gene85625:intron | 50.0% | |
| TGTATTTGGGTAGATGGGGG+GGG | + | chr2.1:48350220-48350239 | None:intergenic | 50.0% | |
| TTACCTTCCAGGGAAAGCGA+AGG | - | chr2.1:48349837-48349856 | MS.gene85625:intron | 50.0% | |
| TTTCTGTGTCGTGATGCAGG+AGG | - | chr2.1:48350861-48350880 | MS.gene85625:intron | 50.0% | |
| ! | AGTTTTTCGCCGCGCTTGTT+GGG | + | chr2.1:48347868-48347887 | None:intergenic | 50.0% |
| !! | AAGTGCGCACGAGTTTGCTA+AGG | - | chr2.1:48351527-48351546 | MS.gene85625:intron | 50.0% |
| !! | ATGGCTGTTGCCTTGCTGTT+TGG | - | chr2.1:48349035-48349054 | MS.gene85625:intron | 50.0% |
| !! | CTCTATTTTGGGAGGACCCT+TGG | + | chr2.1:48350415-48350434 | None:intergenic | 50.0% |
| !! | TCTGGTTTGGGAGCTGTGAT+GGG | - | chr2.1:48348943-48348962 | MS.gene85625:intron | 50.0% |
| !! | TGGCTGCAGTAGCTGTTTTC+TGG | - | chr2.1:48348925-48348944 | MS.gene85625:intron | 50.0% |
| !! | TTCTGGTTTGGGAGCTGTGA+TGG | - | chr2.1:48348942-48348961 | MS.gene85625:intron | 50.0% |
| AAGCGCGGCGAAAAACTCGT+TGG | - | chr2.1:48347871-48347890 | MS.gene85625:intron | 55.0% | |
| ACTCGTGCGCACTTTGAACG+GGG | + | chr2.1:48351521-48351540 | None:intergenic | 55.0% | |
| AGCTTGCGGGTTTACCTTCC+AGG | - | chr2.1:48349826-48349845 | MS.gene85625:intron | 55.0% | |
| CCGGAGATGAATCGTTACGG+AGG | + | chr2.1:48348628-48348647 | None:intergenic | 55.0% | |
| GAACCTTCGCTTTCCCTGGA+AGG | + | chr2.1:48349843-48349862 | None:intergenic | 55.0% | |
| GAACGAACCTTCGCTTTCCC+TGG | + | chr2.1:48349847-48349866 | None:intergenic | 55.0% | |
| GAGGACCCTTGGTTAGATGG+TGG | + | chr2.1:48350404-48350423 | None:intergenic | 55.0% | |
| GCTTGCGGGTTTACCTTCCA+GGG | - | chr2.1:48349827-48349846 | MS.gene85625:intron | 55.0% | |
| GTAACGCTGTTGCTGTCGTC+TGG | - | chr2.1:48348783-48348802 | MS.gene85625:intron | 55.0% | |
| GTATTTGGGTAGATGGGGGG+GGG | + | chr2.1:48350219-48350238 | None:intergenic | 55.0% | |
| TATTTGGGTAGATGGGGGGG+GGG | + | chr2.1:48350218-48350237 | None:intergenic | 55.0% | |
| TCGTTACGGAGGGATCAAGG+CGG | + | chr2.1:48348617-48348636 | None:intergenic | 55.0% | |
| TGGGAGGACCCTTGGTTAGA+TGG | + | chr2.1:48350407-48350426 | None:intergenic | 55.0% | |
| TGTCGTGATCCCTCCATCTC+CGG | - | chr2.1:48348652-48348671 | MS.gene85625:intron | 55.0% | |
| ! | GACCCTTGGTTAGATGGTGG+AGG | + | chr2.1:48350401-48350420 | None:intergenic | 55.0% |
| ! | GAGTTTTTCGCCGCGCTTGT+TGG | + | chr2.1:48347869-48347888 | None:intergenic | 55.0% |
| !! | CTGGTTTGGGAGCTGTGATG+GGG | - | chr2.1:48348944-48348963 | MS.gene85625:intron | 55.0% |
| !! | GGGCTGTTGCGGATTGGTTT+AGG | - | chr2.1:48348964-48348983 | MS.gene85625:intron | 55.0% |
| ATTTGGGTAGATGGGGGGGG+GGG | + | chr2.1:48350217-48350236 | None:intergenic | 60.0% | |
| GGAGGGATCACGACAGTGAC+CGG | + | chr2.1:48348647-48348666 | None:intergenic | 60.0% | |
| TCACTACGGAGGGATCCCGA+CGG | + | chr2.1:48348681-48348700 | None:intergenic | 60.0% | |
| TGTGTGTTTCGGCTGTGGGG+TGG | - | chr2.1:48348812-48348831 | MS.gene85625:intron | 60.0% | |
| TTACGGAGGGATCAAGGCGG+AGG | + | chr2.1:48348614-48348633 | None:intergenic | 60.0% | |
| ! | GAGCTGTGATGGGGCTGTTG+CGG | - | chr2.1:48348953-48348972 | MS.gene85625:intron | 60.0% |
| ! | GTGATGGGGCTGTTGCGGAT+TGG | - | chr2.1:48348958-48348977 | MS.gene85625:intron | 60.0% |
| !! | GCAGGCATCGAAGAACGCCT+TGG | - | chr2.1:48350963-48350982 | MS.gene85625:intron | 60.0% |
| ATCCCGACGGTGACCGGAGA+TGG | + | chr2.1:48348668-48348687 | None:intergenic | 65.0% | |
| CCTCCATCTCCGGTCACCGT+CGG | - | chr2.1:48348662-48348681 | MS.gene85625:intron | 65.0% | |
| CGACGGTGACCGGAGATGGA+GGG | + | chr2.1:48348664-48348683 | None:intergenic | 65.0% | |
| CTCCATCTCCGGTCACCGTC+GGG | - | chr2.1:48348663-48348682 | MS.gene85625:intron | 65.0% | |
| GTACCTCGGAGCTGCAGCAG+TGG | + | chr2.1:48348711-48348730 | None:intergenic | 65.0% | |
| TCTCCACTGCTGCAGCTCCG+AGG | - | chr2.1:48348705-48348724 | MS.gene85625:intron | 65.0% | |
| TTTGGGTAGATGGGGGGGGG+GGG | + | chr2.1:48350216-48350235 | None:intergenic | 65.0% | |
| CCGACGGTGACCGGAGATGG+AGG | + | chr2.1:48348665-48348684 | None:intergenic | 70.0% | |
| GGAGGGATCCCGACGGTGAC+CGG | + | chr2.1:48348674-48348693 | None:intergenic | 70.0% | |
| TTGGGTAGATGGGGGGGGGG+GGG | + | chr2.1:48350215-48350234 | None:intergenic | 70.0% | |
| ! | TCGGCTGTGGGGTGGCTTGC+TGG | - | chr2.1:48348820-48348839 | MS.gene85625:intron | 70.0% |
| TGGGTAGATGGGGGGGGGGG+GGG | + | chr2.1:48350214-48350233 | None:intergenic | 75.0% | |
| ! | GGGTAGATGGGGGGGGGGGG+GGG | + | chr2.1:48350213-48350232 | None:intergenic | 80.0% |
| ! | GGTAGATGGGGGGGGGGGGG+GGG | + | chr2.1:48350212-48350231 | None:intergenic | 80.0% |
| ! | GTAGATGGGGGGGGGGGGGG+GGG | + | chr2.1:48350211-48350230 | None:intergenic | 80.0% |
| ! | TAGATGGGGGGGGGGGGGGG+GGG | + | chr2.1:48350210-48350229 | None:intergenic | 80.0% |
| ! | AGATGGGGGGGGGGGGGGGG+GGG | + | chr2.1:48350209-48350228 | None:intergenic | 85.0% |
| ! | ATGGGGGGGGGGGGGGGGGG+GGG | + | chr2.1:48350207-48350226 | None:intergenic | 90.0% |
| ! | GATGGGGGGGGGGGGGGGGG+GGG | + | chr2.1:48350208-48350227 | None:intergenic | 90.0% |
| ! | GGGGGGGGGGGGGGGGGGGT+GGG | + | chr2.1:48350178-48350197 | None:intergenic | 95.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | + | chr2.1:48350206-48350225 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 48347640 | 48351683 | 48347640 | ID=MS.gene85625 |
| chr2.1 | mRNA | 48347640 | 48351683 | 48347640 | ID=MS.gene85625.t1;Parent=MS.gene85625 |
| chr2.1 | exon | 48351590 | 48351683 | 48351590 | ID=MS.gene85625.t1.exon1;Parent=MS.gene85625.t1 |
| chr2.1 | CDS | 48351590 | 48351683 | 48351590 | ID=cds.MS.gene85625.t1;Parent=MS.gene85625.t1 |
| chr2.1 | exon | 48351363 | 48351487 | 48351363 | ID=MS.gene85625.t1.exon2;Parent=MS.gene85625.t1 |
| chr2.1 | CDS | 48351363 | 48351487 | 48351363 | ID=cds.MS.gene85625.t1;Parent=MS.gene85625.t1 |
| chr2.1 | exon | 48351184 | 48351266 | 48351184 | ID=MS.gene85625.t1.exon3;Parent=MS.gene85625.t1 |
| chr2.1 | CDS | 48351184 | 48351266 | 48351184 | ID=cds.MS.gene85625.t1;Parent=MS.gene85625.t1 |
| chr2.1 | exon | 48349354 | 48349475 | 48349354 | ID=MS.gene85625.t1.exon4;Parent=MS.gene85625.t1 |
| chr2.1 | CDS | 48349354 | 48349475 | 48349354 | ID=cds.MS.gene85625.t1;Parent=MS.gene85625.t1 |
| chr2.1 | exon | 48348279 | 48348443 | 48348279 | ID=MS.gene85625.t1.exon5;Parent=MS.gene85625.t1 |
| chr2.1 | CDS | 48348279 | 48348443 | 48348279 | ID=cds.MS.gene85625.t1;Parent=MS.gene85625.t1 |
| chr2.1 | exon | 48347964 | 48348057 | 48347964 | ID=MS.gene85625.t1.exon6;Parent=MS.gene85625.t1 |
| chr2.1 | CDS | 48347964 | 48348057 | 48347964 | ID=cds.MS.gene85625.t1;Parent=MS.gene85625.t1 |
| chr2.1 | exon | 48347640 | 48347841 | 48347640 | ID=MS.gene85625.t1.exon7;Parent=MS.gene85625.t1 |
| chr2.1 | CDS | 48347640 | 48347841 | 48347640 | ID=cds.MS.gene85625.t1;Parent=MS.gene85625.t1 |
| Gene Sequence |
| Protein sequence |
