AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene012587

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012587.t1 MTR_4g131350 98.410 629 10 0 1 629 54 682 0.0 1272
MS.gene012587.t1 MTR_4g125920 96.979 629 19 0 1 629 1 629 0.0 1250
MS.gene012587.t1 MTR_4g006760 86.020 608 81 4 22 629 22 625 0.0 1029
MS.gene012587.t1 MTR_4g131310 81.416 452 40 4 1 448 1 412 0.0 665
MS.gene012587.t1 MTR_4g131310 98.551 69 1 0 553 621 389 457 2.24e-36 142
MS.gene012587.t1 MTR_3g067815 42.924 643 344 9 1 626 1 637 7.64e-169 496
MS.gene012587.t1 MTR_5g079940 40.701 656 351 13 5 629 472 1120 1.16e-146 453
MS.gene012587.t1 MTR_5g079940 35.616 146 81 5 1 144 1 135 4.77e-16 82.8
MS.gene012587.t1 MTR_5g079940 41.346 104 51 4 1 103 117 211 4.37e-15 79.7
MS.gene012587.t1 MTR_5g079940 39.535 86 47 2 19 103 247 328 1.65e-13 74.7
MS.gene012587.t1 MTR_5g079940 37.255 102 60 3 4 101 352 453 6.65e-11 66.2
MS.gene012587.t1 MTR_2g097020 35.777 682 348 17 13 629 10 666 2.75e-108 341
MS.gene012587.t1 MTR_2g097010 36.527 668 345 16 26 628 23 676 5.83e-100 319
MS.gene012587.t1 MTR_4g046643 36.817 641 340 17 26 612 23 652 9.07e-100 320
MS.gene012587.t1 MTR_2g095400 36.128 656 349 20 13 628 10 635 6.56e-88 286
MS.gene012587.t1 MTR_4g126200 44.361 266 111 6 383 628 3 251 1.80e-59 200
MS.gene012587.t1 MTR_2g097000 38.583 381 191 9 268 618 10 377 2.04e-56 196
MS.gene012587.t1 MTR_3g067855 48.182 220 110 3 410 629 123 338 1.46e-54 190
MS.gene012587.t1 MTR_3g067845 40.711 253 144 4 378 629 4 251 1.37e-45 163
MS.gene012587.t1 MTR_3g067825 46.939 98 46 2 537 629 7 103 5.50e-20 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012587.t1 AT1G15910 56.361 621 257 7 18 628 17 633 0.0 682
MS.gene012587.t1 AT4G00380 55.323 620 264 6 19 628 18 634 0.0 664
MS.gene012587.t1 AT4G00380 55.323 620 264 6 19 628 18 634 0.0 664
MS.gene012587.t1 AT4G00380 52.181 619 257 6 19 628 18 606 0.0 617
MS.gene012587.t1 AT1G80790 53.140 621 276 7 19 629 19 634 0.0 607
MS.gene012587.t1 AT1G80790 53.140 621 276 7 19 629 19 634 0.0 607
MS.gene012587.t1 AT3G48670 40.630 635 346 10 16 629 21 645 1.71e-149 447
MS.gene012587.t1 AT3G48670 40.630 635 346 10 16 629 21 645 1.71e-149 447
MS.gene012587.t1 AT3G48670 40.630 635 346 10 16 629 21 645 1.71e-149 447
MS.gene012587.t1 AT1G80790 51.876 453 205 6 19 461 19 468 1.78e-148 438
MS.gene012587.t1 AT3G12550 36.364 638 369 12 16 625 5 633 4.76e-117 363
MS.gene012587.t1 AT3G12550 36.207 638 371 11 16 625 5 634 5.45e-117 363
MS.gene012587.t1 AT3G12550 36.207 638 371 11 16 625 5 634 5.45e-117 363
MS.gene012587.t1 AT3G12550 36.207 638 371 11 16 625 5 634 5.45e-117 363
MS.gene012587.t1 AT1G13790 39.768 518 282 8 118 618 219 723 1.59e-103 330
MS.gene012587.t1 AT1G13790 37.662 77 48 0 12 88 3 79 4.01e-12 69.7
MS.gene012587.t1 AT1G13790 39.768 518 282 8 118 618 219 723 1.59e-103 330
MS.gene012587.t1 AT1G13790 37.662 77 48 0 12 88 3 79 4.01e-12 69.7
MS.gene012587.t1 AT3G12550 33.510 567 342 11 16 556 5 562 1.25e-89 290
MS.gene012587.t1 AT5G59390 35.436 539 307 13 114 628 30 551 3.37e-83 272
MS.gene012587.t1 AT5G59390 35.436 539 307 13 114 628 30 551 3.37e-83 272
MS.gene012587.t1 AT5G59390 35.436 539 307 13 114 628 30 551 3.37e-83 272
MS.gene012587.t1 AT5G59390 35.110 544 307 14 114 628 30 556 5.10e-81 266
MS.gene012587.t1 AT5G59390 35.110 544 307 14 114 628 30 556 5.10e-81 266
MS.gene012587.t1 AT4G01180 33.996 553 300 14 114 628 28 553 2.75e-75 251
MS.gene012587.t1 AT4G01780 31.631 509 229 10 123 629 79 470 4.35e-65 221
MS.gene012587.t1 AT3G29375 44.335 203 105 2 426 628 32 226 2.71e-47 166
MS.gene012587.t1 AT3G29375 44.335 203 105 2 426 628 155 349 5.20e-46 167
MS.gene012587.t1 AT2G16490 45.946 74 40 0 555 628 75 148 8.44e-17 79.3
MS.gene012587.t1 AT3G29375 38.843 121 66 2 426 546 32 144 9.18e-17 79.0

Find 144 sgRNAs with CRISPR-Local

Find 229 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTGCTCTGGCAAAGTATT+TGG 0.140548 8.1:+2366957 MS.gene012587:CDS
TTCACTCTGACCACTTTAAA+AGG 0.163774 8.1:-2369571 None:intergenic
CAATTGAAGGATCTTGTTTA+AGG 0.184121 8.1:-2368821 None:intergenic
GGTAATAATAAAACTAATAT+TGG 0.209949 8.1:+2369406 MS.gene012587:CDS
CCATCCTTTAACTCCTTATA+AGG 0.231876 8.1:-2366781 None:intergenic
AAGAGCAACCTTAATGATTC+TGG 0.249360 8.1:+2367102 MS.gene012587:CDS
CAAACCTTATAAGGAGTTAA+AGG 0.267169 8.1:+2366777 MS.gene012587:CDS
GCCAGTATCCAGAATCATTA+AGG 0.269275 8.1:-2367110 None:intergenic
ATGGAGATTGAGGAACTAAA+AGG 0.270338 8.1:+2368877 MS.gene012587:CDS
AATAGAAAGTTTGGAGGATA+TGG 0.275154 8.1:+2368990 MS.gene012587:CDS
CCATGGAGCTTTGCTCTGTT+TGG 0.285950 8.1:+2369518 MS.gene012587:CDS
CAGGCCAGTTCAGACATTTA+TGG 0.299736 8.1:+2367309 MS.gene012587:CDS
GAAGCAAGAGTTCAAATATA+AGG 0.303067 8.1:+2366864 MS.gene012587:CDS
GGCAGACAAAATAGAAAGTT+TGG 0.306256 8.1:+2368981 MS.gene012587:CDS
ATACTCTGACAAACCTTATA+AGG 0.314776 8.1:+2366768 MS.gene012587:CDS
ATTTGTAATGTCAATTTCAT+TGG 0.353548 8.1:-2367469 None:intergenic
AGAAAAGTTGCGTAATGAAT+TGG 0.355859 8.1:+2367844 MS.gene012587:CDS
GTATTCATTTACTTCTTTCA+AGG 0.362185 8.1:-2369789 None:intergenic
TTTGGTCTGCTTCATTTACT+AGG 0.363332 8.1:-2366987 None:intergenic
CTCCTCCAGCATCCTACTTA+AGG 0.373591 8.1:-2367538 None:intergenic
TGCAGGTTGGTTGACAGCTT+CGG 0.383198 8.1:-2367028 None:intergenic
ACTGGAAGAGGACAAGAAAA+AGG 0.383259 8.1:+2367946 MS.gene012587:CDS
TGATCAAGAGAGGCAGAAAC+TGG 0.385206 8.1:+2367928 MS.gene012587:CDS
ACCTTAATGATTCTGGATAC+TGG 0.387551 8.1:+2367109 MS.gene012587:CDS
TTGCAAGTTATGAAACATCT+TGG 0.395938 8.1:+2368904 MS.gene012587:CDS
GAGGAATGAATCACTCTTGT+TGG 0.397647 8.1:+2368591 MS.gene012587:CDS
GGCCAATCGGGGAGTACCTT+CGG 0.401670 8.1:+2367367 MS.gene012587:CDS
CTTAAACAAGATCCTTCAAT+TGG 0.401905 8.1:+2368822 MS.gene012587:CDS
GGAAGAAATGAGCACTGAAT+TGG 0.405229 8.1:+2368960 MS.gene012587:CDS
TTGACAGCTTCGGCCAAAGC+CGG 0.413440 8.1:-2367018 None:intergenic
GGATGTCCATGTATTCTTCA+TGG 0.417376 8.1:+2367161 MS.gene012587:CDS
GGAGCTTTGCTCTGTTTGGC+AGG 0.418461 8.1:+2369522 MS.gene012587:CDS
ATCACTCTTGTTGGCTTCAA+AGG 0.419125 8.1:+2368600 MS.gene012587:CDS
CAGGCTTGTTGAAGAGCAAA+AGG 0.422308 8.1:+2368651 MS.gene012587:CDS
TTTCTTTCTCAAGAAGAAGC+TGG 0.423912 8.1:+2369487 MS.gene012587:CDS
GTAATAATAAAACTAATATT+GGG 0.428154 8.1:+2369407 MS.gene012587:CDS
GTCTGCTTCATTTACTAGGT+CGG 0.430421 8.1:-2366983 None:intergenic
TGACAGCTTCGGCCAAAGCC+GGG 0.430548 8.1:-2367017 None:intergenic
TATAATTGTGGAGGGCCAAT+CGG 0.436933 8.1:+2367354 MS.gene012587:CDS
TACAAAGTGAAGAACTTAAA+CGG 0.437308 8.1:+2366808 MS.gene012587:CDS
CCCATGATGTTTAGTTTCAA+AGG 0.437487 8.1:-2367259 None:intergenic
TGAGGAGGTACGAAGGATCT+TGG 0.441330 8.1:+2367814 MS.gene012587:CDS
AAACAGAAACGCCAAACAAA+AGG 0.444045 8.1:+2366927 MS.gene012587:CDS
TAATTCTCAACCTGCGGTGC+AGG 0.450934 8.1:-2367045 None:intergenic
CCTGTAGTTCATCATTGCTC+TGG 0.453560 8.1:-2369047 None:intergenic
TTCTTTCTCAAGAAGAAGCT+GGG 0.457631 8.1:+2369488 MS.gene012587:CDS
ATAATTGTGGAGGGCCAATC+GGG 0.458752 8.1:+2367355 MS.gene012587:CDS
TGGAGATTGAGGAACTAAAA+GGG 0.462021 8.1:+2368878 MS.gene012587:CDS
GACATCCAATGGTCTGTACT+TGG 0.464959 8.1:-2367145 None:intergenic
TAGCTGATGAGAATGTCTTC+AGG 0.469727 8.1:+2368632 MS.gene012587:CDS
TCCTTTGAAACTAAACATCA+TGG 0.472800 8.1:+2367258 MS.gene012587:CDS
TAATGTCAATTTCATTGGCC+AGG 0.476378 8.1:-2367464 None:intergenic
TTCCGAAGGTACTCCCCGAT+TGG 0.479350 8.1:-2367369 None:intergenic
TGCTGAACCTTTGCTTACTC+CGG 0.483792 8.1:-2366905 None:intergenic
CCATCCATAAATGTCTGAAC+TGG 0.485326 8.1:-2367313 None:intergenic
TAATATTGGGACGAAAAGAA+TGG 0.490015 8.1:+2369420 MS.gene012587:CDS
CACCATCCATGAAGAATACA+TGG 0.492568 8.1:-2367167 None:intergenic
AAAGGCAAACCACCTTGCTC+TGG 0.493903 8.1:+2366945 MS.gene012587:CDS
GATTTGATGCAACATGCAAC+CGG 0.499938 8.1:+2366886 MS.gene012587:CDS
AAAATTAGAAATGGAGATTG+AGG 0.501255 8.1:+2368867 MS.gene012587:CDS
AACATCATGGGAAGAAGGAC+TGG 0.503730 8.1:+2367271 MS.gene012587:CDS
TCAGCCTTCCTTTGTTCCGA+AGG 0.504609 8.1:-2367383 None:intergenic
GGATGCTGGAGGAGAAAGAC+AGG 0.505595 8.1:+2367547 MS.gene012587:CDS
CAGTTCAGACATTTATGGAT+GGG 0.508021 8.1:+2367314 MS.gene012587:CDS
CGCAGGTTGAGAATTATGTC+TGG 0.508239 8.1:+2367052 MS.gene012587:CDS
TGTCAACCAACCTGCACCGC+AGG 0.510588 8.1:+2367035 MS.gene012587:CDS
TAGTAGACTTCAACAATGAC+TGG 0.511067 8.1:+2367202 MS.gene012587:CDS
CATGTCCTTAAGTAGGATGC+TGG 0.511615 8.1:+2367533 MS.gene012587:CDS
TCACTCTGACCACTTTAAAA+GGG 0.512768 8.1:-2369570 None:intergenic
TATCAGTGAGTCTGAGATTG+AGG 0.513014 8.1:+2366744 MS.gene012587:CDS
AATTATGTCTGGCCATGGAC+AGG 0.519380 8.1:+2367063 MS.gene012587:CDS
CTCAGGTGCCCATATTGTGC+TGG 0.519768 8.1:+2366835 MS.gene012587:CDS
AATGGGAGACCTTGATGAGA+AGG 0.520493 8.1:+2369438 MS.gene012587:CDS
TCAAGAAGAAGCTGGGATGA+AGG 0.521240 8.1:+2369495 MS.gene012587:CDS
ACATGAGCTATGGAACTTCA+AGG 0.521861 8.1:+2369835 MS.gene012587:CDS
GACAGCTTCGGCCAAAGCCG+GGG 0.523172 8.1:-2367016 None:intergenic
CCAGTTCAGACATTTATGGA+TGG 0.523268 8.1:+2367313 MS.gene012587:CDS
CTGGCGCTCCTTGACAATGA+GGG 0.524882 8.1:-2369028 None:intergenic
AATATTGGGACGAAAAGAAT+GGG 0.525422 8.1:+2369421 MS.gene012587:CDS
CCAGAGCAATGATGAACTAC+AGG 0.526461 8.1:+2369047 MS.gene012587:CDS
CTTATTTAGATCTCTGCTCC+AGG 0.528367 8.1:-2367891 None:intergenic
AGATCCTTCGTACCTCCTCA+CGG 0.530263 8.1:-2367811 None:intergenic
AACTAAACATCATGGGAAGA+AGG 0.530602 8.1:+2367266 MS.gene012587:CDS
GGGGTTAAATGAAATGCTGA+AGG 0.533320 8.1:+2369384 MS.gene012587:intron
AAATAGCATTGTGGAAAACC+TGG 0.534545 8.1:+2367446 MS.gene012587:CDS
ATTTGCCAAGTACAGACCAT+TGG 0.540423 8.1:+2367140 MS.gene012587:CDS
CGTGAAGATGATTATAATTG+TGG 0.540581 8.1:+2367342 MS.gene012587:CDS
TCTCAACCTGCGGTGCAGGT+TGG 0.544080 8.1:-2367041 None:intergenic
TGATTCTGGATACTGGCTAA+AGG 0.547223 8.1:+2367116 MS.gene012587:CDS
CTTCATGGATGGTGACACTC+AGG 0.551198 8.1:+2367176 MS.gene012587:CDS
AAATGCGGAAGCTTGATACC+TGG 0.551489 8.1:+2367873 MS.gene012587:CDS
AGAAGACCATGTCCTTAAGT+AGG 0.555180 8.1:+2367526 MS.gene012587:CDS
AGAAGCTGGGATGAAGGCCA+TGG 0.556908 8.1:+2369501 MS.gene012587:CDS
TCTGGCGCTCCTTGACAATG+AGG 0.559354 8.1:-2369029 None:intergenic
TTGAGAATTATGTCTGGCCA+TGG 0.559406 8.1:+2367058 MS.gene012587:CDS
TGTACAGCATACCCACCACT+TGG 0.569747 8.1:-2369815 None:intergenic
GATCCTTCGTACCTCCTCAC+GGG 0.574071 8.1:-2367810 None:intergenic
AGCAGACCAAATACCTCCCC+CGG 0.574685 8.1:+2366999 MS.gene012587:CDS
AATGAATACAACCCAAGTGG+TGG 0.575225 8.1:+2369803 MS.gene012587:CDS
GGTATGCTGTACATGAGCTA+TGG 0.579873 8.1:+2369825 MS.gene012587:CDS
CCAAATACTTTGCCAGAGCA+AGG 0.580035 8.1:-2366957 None:intergenic
ACTTAAGCGCAAGAGAGGAT+AGG 0.584806 8.1:+2369916 MS.gene012587:CDS
GAAGATGATTATAATTGTGG+AGG 0.585641 8.1:+2367345 MS.gene012587:CDS
AGAAGTTATTACTTATATCG+TGG 0.586754 8.1:+2369880 MS.gene012587:CDS
AGTACCTTCGGAACAAAGGA+AGG 0.587192 8.1:+2367379 MS.gene012587:CDS
CCAAACAGAGCAAAGCTCCA+TGG 0.587327 8.1:-2369518 None:intergenic
AGAGAGGCAGAAACTGGAAG+AGG 0.587763 8.1:+2367934 MS.gene012587:CDS
CTGGAATTCAAAGGACATGC+AGG 0.587852 8.1:+2367290 MS.gene012587:CDS
GACTTCAACAATGACTGGAA+TGG 0.589478 8.1:+2367207 MS.gene012587:CDS
GAATCAAACCCTCATTGTCA+AGG 0.592874 8.1:+2369020 MS.gene012587:CDS
AAGAATACATGGACATCCAA+TGG 0.592903 8.1:-2367156 None:intergenic
AGACAAAATAGAAAGTTTGG+AGG 0.593505 8.1:+2368984 MS.gene012587:CDS
TTAACGATTATGCCTGTCCA+TGG 0.594850 8.1:-2367075 None:intergenic
CTTTATAGTACATACCTCAT+GGG 0.595496 8.1:-2369599 None:intergenic
GAACTTCAAGGAACAGAGGA+AGG 0.596171 8.1:+2369847 MS.gene012587:CDS
GTCCATGTATTCTTCATGGA+TGG 0.597803 8.1:+2367165 MS.gene012587:CDS
CCTTATAAGGAGTTAAAGGA+TGG 0.598931 8.1:+2366781 MS.gene012587:CDS
CAGCATCCTACTTAAGGACA+TGG 0.599280 8.1:-2367532 None:intergenic
ACAGCTTCGGCCAAAGCCGG+GGG 0.602001 8.1:-2367015 None:intergenic
CCTTTGAAACTAAACATCAT+GGG 0.603923 8.1:+2367259 MS.gene012587:CDS
GGGGAGTACCTTCGGAACAA+AGG 0.609491 8.1:+2367375 MS.gene012587:CDS
AAGCAACTTAAGCGCAAGAG+AGG 0.619700 8.1:+2369911 MS.gene012587:CDS
AAGATGATTATAATTGTGGA+GGG 0.627167 8.1:+2367346 MS.gene012587:CDS
GAAGAAGGACTGGAATTCAA+AGG 0.628414 8.1:+2367281 MS.gene012587:CDS
ATGAATACAACCCAAGTGGT+GGG 0.633174 8.1:+2369804 MS.gene012587:CDS
AGAACTTAAACGGCACACTC+AGG 0.633398 8.1:+2366818 MS.gene012587:CDS
CAGACATAATTCTCAACCTG+CGG 0.633547 8.1:-2367051 None:intergenic
CATGCAACCGGAGTAAGCAA+AGG 0.637786 8.1:+2366898 MS.gene012587:CDS
GGGTTAAATGAAATGCTGAA+GGG 0.639837 8.1:+2369385 MS.gene012587:CDS
AAGCCCGTGAGGAGGTACGA+AGG 0.640443 8.1:+2367807 MS.gene012587:CDS
GACACAGTCAGTTATAGATG+AGG 0.652703 8.1:+2369700 MS.gene012587:intron
GTCCTTAAGTAGGATGCTGG+AGG 0.661594 8.1:+2367536 MS.gene012587:CDS
AGGTACTAACTGATCAAGAG+AGG 0.662179 8.1:+2367918 MS.gene012587:CDS
GTACAGCATACCCACCACTT+GGG 0.664374 8.1:-2369814 None:intergenic
CAGAGATCTAAATAAGCGTG+AGG 0.673270 8.1:+2367898 MS.gene012587:CDS
TGAAAGCAGAAATAGCATTG+TGG 0.673917 8.1:+2367437 MS.gene012587:CDS
GTAAATGAATACAACCCAAG+TGG 0.677594 8.1:+2369800 MS.gene012587:CDS
TAATTGTGGAGGGCCAATCG+GGG 0.679230 8.1:+2367356 MS.gene012587:CDS
GCAGCGTAAAGCCCGTGAGG+AGG 0.680045 8.1:+2367799 MS.gene012587:CDS
TATGGAACTTCAAGGAACAG+AGG 0.683112 8.1:+2369843 MS.gene012587:CDS
TGTCTTTCTAGAAAGACTCG+AGG 0.689901 8.1:+2368572 MS.gene012587:intron
CAGAGTGAATGATACCCATG+AGG 0.719794 8.1:+2369585 MS.gene012587:CDS
TATGCAGCGTAAAGCCCGTG+AGG 0.720834 8.1:+2367796 MS.gene012587:CDS
AATACTTTGCCAGAGCAAGG+TGG 0.722505 8.1:-2366954 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAATTAAAAAAATAAA+AGG - chr8.1:2368406-2368425 None:intergenic 0.0%
!! AAATAGTATAATAATTAACA+CGG + chr8.1:2369662-2369681 MS.gene012587:intron 10.0%
!! GTAATAATAAAACTAATATT+GGG + chr8.1:2369407-2369426 MS.gene012587:CDS 10.0%
!! ATCAATGTATACTATATATA+TGG + chr8.1:2368251-2368270 MS.gene012587:intron 15.0%
!! GGTAATAATAAAACTAATAT+TGG + chr8.1:2369406-2369425 MS.gene012587:CDS 15.0%
!!! ATTATACTATTTCTAAATTG+AGG - chr8.1:2369654-2369673 None:intergenic 15.0%
!!! TTATTTTATTATTAGAGTCA+AGG + chr8.1:2367771-2367790 MS.gene012587:intron 15.0%
!!! TTTTAAATATTTTTTGTTGC+TGG + chr8.1:2368002-2368021 MS.gene012587:intron 15.0%
!! ATTTGTAATGTCAATTTCAT+TGG - chr8.1:2367472-2367491 None:intergenic 20.0%
!! TATAAACAAGAGTAAATAGA+GGG - chr8.1:2368681-2368700 None:intergenic 20.0%
!! TGAAGCTATTAAGAAAAAAA+TGG + chr8.1:2368939-2368958 MS.gene012587:CDS 20.0%
!! TTATAAACAAGAGTAAATAG+AGG - chr8.1:2368682-2368701 None:intergenic 20.0%
!!! AATTCTTATTTCCTAAAGAA+AGG - chr8.1:2369276-2369295 None:intergenic 20.0%
!!! CTCTAATTTCTATTGTTTTA+GGG + chr8.1:2369364-2369383 MS.gene012587:intron 20.0%
!!! TCTAATTTCTATTGTTTTAG+GGG + chr8.1:2369365-2369384 MS.gene012587:intron 20.0%
!!! TCTCTAATTTCTATTGTTTT+AGG + chr8.1:2369363-2369382 MS.gene012587:intron 20.0%
! AAAATTAGAAATGGAGATTG+AGG + chr8.1:2368867-2368886 MS.gene012587:CDS 25.0%
! AAATTAGAGAGAGAAAAATG+AGG - chr8.1:2369353-2369372 None:intergenic 25.0%
! AAGATGATTATAATTGTGGA+GGG + chr8.1:2367346-2367365 MS.gene012587:CDS 25.0%
! AATTAGAGAGAGAAAAATGA+GGG - chr8.1:2369352-2369371 None:intergenic 25.0%
! ACGAAATTTCAACATAAATG+TGG - chr8.1:2368330-2368349 None:intergenic 25.0%
! AGAAGTTATTACTTATATCG+TGG + chr8.1:2369880-2369899 MS.gene012587:CDS 25.0%
! ATGAATTGGATGAAAAAATG+CGG + chr8.1:2367858-2367877 MS.gene012587:CDS 25.0%
! CAAGAATAGAAAAACATACA+TGG - chr8.1:2367664-2367683 None:intergenic 25.0%
! GAAGTAATATTTGAATCTTG+AGG - chr8.1:2368552-2368571 None:intergenic 25.0%
! GTATTCATTTACTTCTTTCA+AGG - chr8.1:2369792-2369811 None:intergenic 25.0%
! TACAAAGTGAAGAACTTAAA+CGG + chr8.1:2366808-2366827 MS.gene012587:CDS 25.0%
! TGCCAAACAAAAATTAGAAA+TGG + chr8.1:2368858-2368877 MS.gene012587:CDS 25.0%
! TTAAGAATACAAGACGATAA+AGG - chr8.1:2369180-2369199 None:intergenic 25.0%
!! CTCCATTTCTAATTTTTGTT+TGG - chr8.1:2368863-2368882 None:intergenic 25.0%
!! TCACAATAATCAAAAGCTTT+TGG - chr8.1:2368225-2368244 None:intergenic 25.0%
!!! AAAAGCTTTTGATTATTGTG+AGG + chr8.1:2368224-2368243 MS.gene012587:intron 25.0%
!!! ATGATGATTTTAAAGTCTTG+AGG - chr8.1:2368514-2368533 None:intergenic 25.0%
!!! TTTTGCCTTATTGTATGTAA+AGG + chr8.1:2367619-2367638 MS.gene012587:intron 25.0%
AAAGTTGGGATTCACTTAAA+GGG - chr8.1:2368158-2368177 None:intergenic 30.0%
AATAGAAAGTTTGGAGGATA+TGG + chr8.1:2368990-2369009 MS.gene012587:CDS 30.0%
AATATTGGGACGAAAAGAAT+GGG + chr8.1:2369421-2369440 MS.gene012587:CDS 30.0%
ACAAGACGATAAAGGTTAAA+AGG - chr8.1:2369172-2369191 None:intergenic 30.0%
AGAAAAGTTGCGTAATGAAT+TGG + chr8.1:2367844-2367863 MS.gene012587:CDS 30.0%
AGAATGTGAAAAATTCAGCA+TGG + chr8.1:2369545-2369564 MS.gene012587:CDS 30.0%
AGACAAAATAGAAAGTTTGG+AGG + chr8.1:2368984-2369003 MS.gene012587:CDS 30.0%
ATACTCTGACAAACCTTATA+AGG + chr8.1:2366768-2366787 MS.gene012587:CDS 30.0%
ATTAGAGAGAGAAAAATGAG+GGG - chr8.1:2369351-2369370 None:intergenic 30.0%
CAAACCTTATAAGGAGTTAA+AGG + chr8.1:2366777-2366796 MS.gene012587:CDS 30.0%
CGTGAAGATGATTATAATTG+TGG + chr8.1:2367342-2367361 MS.gene012587:CDS 30.0%
CTTAAACAAGATCCTTCAAT+TGG + chr8.1:2368822-2368841 MS.gene012587:CDS 30.0%
CTTTATAGTACATACCTCAT+GGG - chr8.1:2369602-2369621 None:intergenic 30.0%
GAAATTAAAAAAGCTCAAGC+AGG + chr8.1:2369730-2369749 MS.gene012587:CDS 30.0%
GAAGATGATTATAATTGTGG+AGG + chr8.1:2367345-2367364 MS.gene012587:CDS 30.0%
GAAGCAAGAGTTCAAATATA+AGG + chr8.1:2366864-2366883 MS.gene012587:CDS 30.0%
GAGTAGAAAAAAACTTGCAT+AGG + chr8.1:2367703-2367722 MS.gene012587:intron 30.0%
TAATATTGGGACGAAAAGAA+TGG + chr8.1:2369420-2369439 MS.gene012587:CDS 30.0%
TCTTTATAGTACATACCTCA+TGG - chr8.1:2369603-2369622 None:intergenic 30.0%
TTCTGCTGTGAATATATTGT+GGG + chr8.1:2369310-2369329 MS.gene012587:intron 30.0%
TTGCAAGTTATGAAACATCT+TGG + chr8.1:2368904-2368923 MS.gene012587:CDS 30.0%
! ACTTATACTGCATTTTGTTG+AGG - chr8.1:2367500-2367519 None:intergenic 30.0%
! CAATTGAAGGATCTTGTTTA+AGG - chr8.1:2368824-2368843 None:intergenic 30.0%
!! AATCTATGCAACTTGTTAGT+TGG - chr8.1:2369209-2369228 None:intergenic 30.0%
!! CCTTTGAAACTAAACATCAT+GGG + chr8.1:2367259-2367278 MS.gene012587:CDS 30.0%
!! TCCTTTGAAACTAAACATCA+TGG + chr8.1:2367258-2367277 MS.gene012587:CDS 30.0%
!!! CTAATTTTTTGCAAGGACAA+TGG - chr8.1:2368049-2368068 None:intergenic 30.0%
!!! TCTTTTTTCCAGCACAATAT+GGG - chr8.1:2366846-2366865 None:intergenic 30.0%
!!! TTCTTTTTTCCAGCACAATA+TGG - chr8.1:2366847-2366866 None:intergenic 30.0%
AAAAAAGCTCAAGCAGGAAT+GGG + chr8.1:2369736-2369755 MS.gene012587:CDS 35.0%
AAACAGAAACGCCAAACAAA+AGG + chr8.1:2366927-2366946 MS.gene012587:CDS 35.0%
AAATAGCATTGTGGAAAACC+TGG + chr8.1:2367446-2367465 MS.gene012587:CDS 35.0%
AACTAAACATCATGGGAAGA+AGG + chr8.1:2367266-2367285 MS.gene012587:CDS 35.0%
AAGAATACATGGACATCCAA+TGG - chr8.1:2367159-2367178 None:intergenic 35.0%
AAGAGCAACCTTAATGATTC+TGG + chr8.1:2367102-2367121 MS.gene012587:CDS 35.0%
ACCTTAATGATTCTGGATAC+TGG + chr8.1:2367109-2367128 MS.gene012587:CDS 35.0%
AGCAAGTAGAGATTAGAAAG+TGG - chr8.1:2368484-2368503 None:intergenic 35.0%
ATGGAGATTGAGGAACTAAA+AGG + chr8.1:2368877-2368896 MS.gene012587:CDS 35.0%
CAAGTTGCATAGATTTCTTC+AGG + chr8.1:2369214-2369233 MS.gene012587:intron 35.0%
CACAGCCTTTACATACAATA+AGG - chr8.1:2367627-2367646 None:intergenic 35.0%
CAGTTCAGACATTTATGGAT+GGG + chr8.1:2367314-2367333 MS.gene012587:CDS 35.0%
CCATCCTTTAACTCCTTATA+AGG - chr8.1:2366784-2366803 None:intergenic 35.0%
CCTTATAAGGAGTTAAAGGA+TGG + chr8.1:2366781-2366800 MS.gene012587:CDS 35.0%
GAAAGTTGGGATTCACTTAA+AGG - chr8.1:2368159-2368178 None:intergenic 35.0%
GATCATCTCTACCTTTCTTT+AGG + chr8.1:2369262-2369281 MS.gene012587:intron 35.0%
GCAAGTAGAGATTAGAAAGT+GGG - chr8.1:2368483-2368502 None:intergenic 35.0%
GGCAGACAAAATAGAAAGTT+TGG + chr8.1:2368981-2369000 MS.gene012587:CDS 35.0%
GGGTTAAATGAAATGCTGAA+GGG + chr8.1:2369385-2369404 MS.gene012587:CDS 35.0%
GTAAATGAATACAACCCAAG+TGG + chr8.1:2369800-2369819 MS.gene012587:CDS 35.0%
GTTCTGCTGTGAATATATTG+TGG + chr8.1:2369309-2369328 MS.gene012587:intron 35.0%
TAAAAAAGCTCAAGCAGGAA+TGG + chr8.1:2369735-2369754 MS.gene012587:CDS 35.0%
TAATGTCAATTTCATTGGCC+AGG - chr8.1:2367467-2367486 None:intergenic 35.0%
TAGTAGACTTCAACAATGAC+TGG + chr8.1:2367202-2367221 MS.gene012587:CDS 35.0%
TCACAAAAACCTTCTCATCA+AGG - chr8.1:2369450-2369469 None:intergenic 35.0%
TGAAAGCAGAAATAGCATTG+TGG + chr8.1:2367437-2367456 MS.gene012587:CDS 35.0%
TGGAGATTGAGGAACTAAAA+GGG + chr8.1:2368878-2368897 MS.gene012587:CDS 35.0%
TGGGATGAAAGAAAACACAT+CGG - chr8.1:2368464-2368483 None:intergenic 35.0%
TTAGAGAGAGAAAAATGAGG+GGG - chr8.1:2369350-2369369 None:intergenic 35.0%
TTCACTCTGACCACTTTAAA+AGG - chr8.1:2369574-2369593 None:intergenic 35.0%
TTCACTTAAAGGGAGTGAAT+AGG - chr8.1:2368148-2368167 None:intergenic 35.0%
TTCTTTCTCAAGAAGAAGCT+GGG + chr8.1:2369488-2369507 MS.gene012587:CDS 35.0%
TTTCTTTCTCAAGAAGAAGC+TGG + chr8.1:2369487-2369506 MS.gene012587:CDS 35.0%
TTTGGTCTGCTTCATTTACT+AGG - chr8.1:2366990-2367009 None:intergenic 35.0%
! CCCATGATGTTTAGTTTCAA+AGG - chr8.1:2367262-2367281 None:intergenic 35.0%
! CTTCACAATGCTTTTGTTGA+AGG + chr8.1:2367570-2367589 MS.gene012587:CDS 35.0%
! TCACTCTGACCACTTTAAAA+GGG - chr8.1:2369573-2369592 None:intergenic 35.0%
! TCTTTTTCTCTCTGGTAGTT+TGG - chr8.1:2368796-2368815 None:intergenic 35.0%
!!! CTAGTTGCTTTTCCAATTGA+AGG - chr8.1:2368837-2368856 None:intergenic 35.0%
!!! GACAGGTCTAATTTTTTGCA+AGG - chr8.1:2368056-2368075 None:intergenic 35.0%
AAAAAGCTCAAGCAGGAATG+GGG + chr8.1:2369737-2369756 MS.gene012587:CDS 40.0%
AAGTGAATCCCAACTTTCGT+TGG + chr8.1:2368161-2368180 MS.gene012587:intron 40.0%
AATGAATACAACCCAAGTGG+TGG + chr8.1:2369803-2369822 MS.gene012587:CDS 40.0%
ACATGAGCTATGGAACTTCA+AGG + chr8.1:2369835-2369854 MS.gene012587:CDS 40.0%
ACTGGAAGAGGACAAGAAAA+AGG + chr8.1:2367946-2367965 MS.gene012587:CDS 40.0%
AGAAGACCATGTCCTTAAGT+AGG + chr8.1:2367526-2367545 MS.gene012587:CDS 40.0%
AGGTACTAACTGATCAAGAG+AGG + chr8.1:2367918-2367937 MS.gene012587:CDS 40.0%
ATGAATACAACCCAAGTGGT+GGG + chr8.1:2369804-2369823 MS.gene012587:CDS 40.0%
ATGCAAATCAAGAGCAACCA+AGG - chr8.1:2368104-2368123 None:intergenic 40.0%
ATTAGACCTGTCTTTGTCGA+TGG + chr8.1:2368064-2368083 MS.gene012587:intron 40.0%
ATTTGCCAAGTACAGACCAT+TGG + chr8.1:2367140-2367159 MS.gene012587:CDS 40.0%
CACCATCCATGAAGAATACA+TGG - chr8.1:2367170-2367189 None:intergenic 40.0%
CAGACATAATTCTCAACCTG+CGG - chr8.1:2367054-2367073 None:intergenic 40.0%
CAGAGATCTAAATAAGCGTG+AGG + chr8.1:2367898-2367917 MS.gene012587:CDS 40.0%
CCAGTTCAGACATTTATGGA+TGG + chr8.1:2367313-2367332 MS.gene012587:CDS 40.0%
CCATCCATAAATGTCTGAAC+TGG - chr8.1:2367316-2367335 None:intergenic 40.0%
CTACCAGAGAGAAAAAGAAG+AGG + chr8.1:2368798-2368817 MS.gene012587:intron 40.0%
CTCTTAGTCCAATTAGCAGA+TGG - chr8.1:2368194-2368213 None:intergenic 40.0%
CTTATTTAGATCTCTGCTCC+AGG - chr8.1:2367894-2367913 None:intergenic 40.0%
GAAGAAGGACTGGAATTCAA+AGG + chr8.1:2367281-2367300 MS.gene012587:CDS 40.0%
GAATCAAACCCTCATTGTCA+AGG + chr8.1:2369020-2369039 MS.gene012587:CDS 40.0%
GACACAGTCAGTTATAGATG+AGG + chr8.1:2369700-2369719 MS.gene012587:intron 40.0%
GACTTCAACAATGACTGGAA+TGG + chr8.1:2367207-2367226 MS.gene012587:CDS 40.0%
GAGGAATGAATCACTCTTGT+TGG + chr8.1:2368591-2368610 MS.gene012587:CDS 40.0%
GATTTGATGCAACATGCAAC+CGG + chr8.1:2366886-2366905 MS.gene012587:CDS 40.0%
GCCAGTATCCAGAATCATTA+AGG - chr8.1:2367113-2367132 None:intergenic 40.0%
GGATGTCCATGTATTCTTCA+TGG + chr8.1:2367161-2367180 MS.gene012587:CDS 40.0%
GGGATGAAAGAAAACACATC+GGG - chr8.1:2368463-2368482 None:intergenic 40.0%
GGGGTTAAATGAAATGCTGA+AGG + chr8.1:2369384-2369403 MS.gene012587:intron 40.0%
GTCCATGTATTCTTCATGGA+TGG + chr8.1:2367165-2367184 MS.gene012587:CDS 40.0%
GTCTGCTTCATTTACTAGGT+CGG - chr8.1:2366986-2367005 None:intergenic 40.0%
TAGCTGATGAGAATGTCTTC+AGG + chr8.1:2368632-2368651 MS.gene012587:CDS 40.0%
TATAATTGTGGAGGGCCAAT+CGG + chr8.1:2367354-2367373 MS.gene012587:CDS 40.0%
TATGGAACTTCAAGGAACAG+AGG + chr8.1:2369843-2369862 MS.gene012587:CDS 40.0%
TCAGCAGAAGACATTCACAA+TGG - chr8.1:2368764-2368783 None:intergenic 40.0%
TTAACGATTATGCCTGTCCA+TGG - chr8.1:2367078-2367097 None:intergenic 40.0%
TTAGTCCAATTAGCAGATGG+TGG - chr8.1:2368191-2368210 None:intergenic 40.0%
TTGAGAATTATGTCTGGCCA+TGG + chr8.1:2367058-2367077 MS.gene012587:CDS 40.0%
! GTGAATGTCTTCTGCTGATT+TGG + chr8.1:2368766-2368785 MS.gene012587:intron 40.0%
! TATCAGTGAGTCTGAGATTG+AGG + chr8.1:2366744-2366763 MS.gene012587:CDS 40.0%
! TGATTCTGGATACTGGCTAA+AGG + chr8.1:2367116-2367135 MS.gene012587:CDS 40.0%
! TGTCTTTCTAGAAAGACTCG+AGG + chr8.1:2368572-2368591 MS.gene012587:intron 40.0%
!! AAGGTGGTTTGCCTTTTGTT+TGG - chr8.1:2366941-2366960 None:intergenic 40.0%
!! ATCACTCTTGTTGGCTTCAA+AGG + chr8.1:2368600-2368619 MS.gene012587:CDS 40.0%
!! GGAAGAAATGAGCACTGAAT+TGG + chr8.1:2368960-2368979 MS.gene012587:CDS 40.0%
AAATGCGGAAGCTTGATACC+TGG + chr8.1:2367873-2367892 MS.gene012587:CDS 45.0%
AACATCATGGGAAGAAGGAC+TGG + chr8.1:2367271-2367290 MS.gene012587:CDS 45.0%
AAGCAACTTAAGCGCAAGAG+AGG + chr8.1:2369911-2369930 MS.gene012587:CDS 45.0%
AAGGCTGTGTGCTTCATGTT+TGG + chr8.1:2367638-2367657 MS.gene012587:intron 45.0%
AATACTTTGCCAGAGCAAGG+TGG - chr8.1:2366957-2366976 None:intergenic 45.0%
AATGGGAGACCTTGATGAGA+AGG + chr8.1:2369438-2369457 MS.gene012587:CDS 45.0%
AATTATGTCTGGCCATGGAC+AGG + chr8.1:2367063-2367082 MS.gene012587:CDS 45.0%
AGAACTTAAACGGCACACTC+AGG + chr8.1:2366818-2366837 MS.gene012587:CDS 45.0%
AGGATACCATCGACAAAGAC+AGG - chr8.1:2368073-2368092 None:intergenic 45.0%
AGTACCTTCGGAACAAAGGA+AGG + chr8.1:2367379-2367398 MS.gene012587:CDS 45.0%
ATAATTGTGGAGGGCCAATC+GGG + chr8.1:2367355-2367374 MS.gene012587:CDS 45.0%
CAGAGTGAATGATACCCATG+AGG + chr8.1:2369585-2369604 MS.gene012587:CDS 45.0%
CAGCATCCTACTTAAGGACA+TGG - chr8.1:2367535-2367554 None:intergenic 45.0%
CAGGCCAGTTCAGACATTTA+TGG + chr8.1:2367309-2367328 MS.gene012587:CDS 45.0%
CATGTCCTTAAGTAGGATGC+TGG + chr8.1:2367533-2367552 MS.gene012587:CDS 45.0%
CCAAATACTTTGCCAGAGCA+AGG - chr8.1:2366960-2366979 None:intergenic 45.0%
CCAGAGCAATGATGAACTAC+AGG + chr8.1:2369047-2369066 MS.gene012587:CDS 45.0%
CCTGTAGTTCATCATTGCTC+TGG - chr8.1:2369050-2369069 None:intergenic 45.0%
CTGGAATTCAAAGGACATGC+AGG + chr8.1:2367290-2367309 MS.gene012587:CDS 45.0%
GAACTTCAAGGAACAGAGGA+AGG + chr8.1:2369847-2369866 MS.gene012587:CDS 45.0%
GACATCCAATGGTCTGTACT+TGG - chr8.1:2367148-2367167 None:intergenic 45.0%
GGTATGCTGTACATGAGCTA+TGG + chr8.1:2369825-2369844 MS.gene012587:CDS 45.0%
TCAAGAAGAAGCTGGGATGA+AGG + chr8.1:2369495-2369514 MS.gene012587:CDS 45.0%
TCAAGAGCAACCAAGGACAT+TGG - chr8.1:2368097-2368116 None:intergenic 45.0%
TGATCAAGAGAGGCAGAAAC+TGG + chr8.1:2367928-2367947 MS.gene012587:CDS 45.0%
TGCTGAACCTTTGCTTACTC+CGG - chr8.1:2366908-2366927 None:intergenic 45.0%
TGGTATCCTACCAATGTCCT+TGG + chr8.1:2368084-2368103 MS.gene012587:intron 45.0%
! AGGCCTCTTCTTTTTCTCTC+TGG - chr8.1:2368804-2368823 None:intergenic 45.0%
! CCTTGCTCTGGCAAAGTATT+TGG + chr8.1:2366957-2366976 MS.gene012587:CDS 45.0%
! CGCAGGTTGAGAATTATGTC+TGG + chr8.1:2367052-2367071 MS.gene012587:CDS 45.0%
!! AGCATGGCACCCTTTTAAAG+TGG + chr8.1:2369561-2369580 MS.gene012587:CDS 45.0%
!! CAGGCTTGTTGAAGAGCAAA+AGG + chr8.1:2368651-2368670 MS.gene012587:CDS 45.0%
!! TCCAATTAGCAGATGGTGGA+AGG - chr8.1:2368187-2368206 None:intergenic 45.0%
!!! CGGGCAGATGTGGTTTTTTA+TGG - chr8.1:2368444-2368463 None:intergenic 45.0%
!!! TTTTTTTAATTCTATATAAA+AGG + chr8.1:2369122-2369141 MS.gene012587:intron 5.0%
!!! TTTTTTTTTTAACAAATATA+TGG + chr8.1:2368289-2368308 MS.gene012587:intron 5.0%
AAAGGCAAACCACCTTGCTC+TGG + chr8.1:2366945-2366964 MS.gene012587:CDS 50.0%
AGAGAGGCAGAAACTGGAAG+AGG + chr8.1:2367934-2367953 MS.gene012587:CDS 50.0%
AGATCCTTCGTACCTCCTCA+CGG - chr8.1:2367814-2367833 None:intergenic 50.0%
CATGCAACCGGAGTAAGCAA+AGG + chr8.1:2366898-2366917 MS.gene012587:CDS 50.0%
CCAAACAGAGCAAAGCTCCA+TGG - chr8.1:2369521-2369540 None:intergenic 50.0%
CCATGGAGCTTTGCTCTGTT+TGG + chr8.1:2369518-2369537 MS.gene012587:CDS 50.0%
CTCCTCCAGCATCCTACTTA+AGG - chr8.1:2367541-2367560 None:intergenic 50.0%
CTTCATGGATGGTGACACTC+AGG + chr8.1:2367176-2367195 MS.gene012587:CDS 50.0%
GAAAACACATCGGGCAGATG+TGG - chr8.1:2368454-2368473 None:intergenic 50.0%
GAGCAACCAAGGACATTGGT+AGG - chr8.1:2368093-2368112 None:intergenic 50.0%
GCCTTCCACCATCTGCTAAT+TGG + chr8.1:2368183-2368202 MS.gene012587:intron 50.0%
GGTAGAGATGATCTTCACGC+AGG - chr8.1:2369255-2369274 None:intergenic 50.0%
GTACAGCATACCCACCACTT+GGG - chr8.1:2369817-2369836 None:intergenic 50.0%
GTCCTTAAGTAGGATGCTGG+AGG + chr8.1:2367536-2367555 MS.gene012587:CDS 50.0%
GTGGAAGGCCAACGAAAGTT+GGG - chr8.1:2368172-2368191 None:intergenic 50.0%
TAATTCTCAACCTGCGGTGC+AGG - chr8.1:2367048-2367067 None:intergenic 50.0%
TAATTGTGGAGGGCCAATCG+GGG + chr8.1:2367356-2367375 MS.gene012587:CDS 50.0%
TCAGCCTTCCTTTGTTCCGA+AGG - chr8.1:2367386-2367405 None:intergenic 50.0%
TGTACAGCATACCCACCACT+TGG - chr8.1:2369818-2369837 None:intergenic 50.0%
! TGAGGAGGTACGAAGGATCT+TGG + chr8.1:2367814-2367833 MS.gene012587:CDS 50.0%
!! TGCAGGTTGGTTGACAGCTT+CGG - chr8.1:2367031-2367050 None:intergenic 50.0%
AGAAGCTGGGATGAAGGCCA+TGG + chr8.1:2369501-2369520 MS.gene012587:CDS 55.0%
AGCAGACCAAATACCTCCCC+CGG + chr8.1:2366999-2367018 MS.gene012587:CDS 55.0%
CTCAGGTGCCCATATTGTGC+TGG + chr8.1:2366835-2366854 MS.gene012587:CDS 55.0%
CTGGCGCTCCTTGACAATGA+GGG - chr8.1:2369031-2369050 None:intergenic 55.0%
GATCCTTCGTACCTCCTCAC+GGG - chr8.1:2367813-2367832 None:intergenic 55.0%
GGAGCTTTGCTCTGTTTGGC+AGG + chr8.1:2369522-2369541 MS.gene012587:CDS 55.0%
GGATGCTGGAGGAGAAAGAC+AGG + chr8.1:2367547-2367566 MS.gene012587:CDS 55.0%
GGTGGAAGGCCAACGAAAGT+TGG - chr8.1:2368173-2368192 None:intergenic 55.0%
TATGCAGCGTAAAGCCCGTG+AGG + chr8.1:2367796-2367815 MS.gene012587:CDS 55.0%
TCTGGCGCTCCTTGACAATG+AGG - chr8.1:2369032-2369051 None:intergenic 55.0%
TTGACAGCTTCGGCCAAAGC+CGG - chr8.1:2367021-2367040 None:intergenic 55.0%
!! GGGGAGTACCTTCGGAACAA+AGG + chr8.1:2367375-2367394 MS.gene012587:CDS 55.0%
!! TTCCGAAGGTACTCCCCGAT+TGG - chr8.1:2367372-2367391 None:intergenic 55.0%
CCAAATACCTCCCCCGGCTT+TGG + chr8.1:2367005-2367024 MS.gene012587:CDS 60.0%
TCTCAACCTGCGGTGCAGGT+TGG - chr8.1:2367044-2367063 None:intergenic 60.0%
TGACAGCTTCGGCCAAAGCC+GGG - chr8.1:2367020-2367039 None:intergenic 60.0%
TGTCAACCAACCTGCACCGC+AGG + chr8.1:2367035-2367054 MS.gene012587:CDS 60.0%
! AAGCCCGTGAGGAGGTACGA+AGG + chr8.1:2367807-2367826 MS.gene012587:CDS 60.0%
!! CCAAAGCCGGGGGAGGTATT+TGG - chr8.1:2367008-2367027 None:intergenic 60.0%
!! GGCCAATCGGGGAGTACCTT+CGG + chr8.1:2367367-2367386 MS.gene012587:CDS 60.0%
ACAGCTTCGGCCAAAGCCGG+GGG - chr8.1:2367018-2367037 None:intergenic 65.0%
GACAGCTTCGGCCAAAGCCG+GGG - chr8.1:2367019-2367038 None:intergenic 65.0%
GCAGCGTAAAGCCCGTGAGG+AGG + chr8.1:2367799-2367818 MS.gene012587:CDS 65.0%
GCTTCGGCCAAAGCCGGGGG+AGG - chr8.1:2367015-2367034 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 2366715 2369937 2366715 ID=MS.gene012587
chr8.1 mRNA 2366715 2369937 2366715 ID=MS.gene012587.t1;Parent=MS.gene012587
chr8.1 exon 2366715 2367591 2366715 ID=MS.gene012587.t1.exon1;Parent=MS.gene012587.t1
chr8.1 CDS 2366715 2367591 2366715 ID=cds.MS.gene012587.t1;Parent=MS.gene012587.t1
chr8.1 exon 2367786 2367967 2367786 ID=MS.gene012587.t1.exon2;Parent=MS.gene012587.t1
chr8.1 CDS 2367786 2367967 2367786 ID=cds.MS.gene012587.t1;Parent=MS.gene012587.t1
chr8.1 exon 2368583 2368672 2368583 ID=MS.gene012587.t1.exon3;Parent=MS.gene012587.t1
chr8.1 CDS 2368583 2368672 2368583 ID=cds.MS.gene012587.t1;Parent=MS.gene012587.t1
chr8.1 exon 2368805 2369092 2368805 ID=MS.gene012587.t1.exon4;Parent=MS.gene012587.t1
chr8.1 CDS 2368805 2369092 2368805 ID=cds.MS.gene012587.t1;Parent=MS.gene012587.t1
chr8.1 exon 2369385 2369606 2369385 ID=MS.gene012587.t1.exon5;Parent=MS.gene012587.t1
chr8.1 CDS 2369385 2369606 2369385 ID=cds.MS.gene012587.t1;Parent=MS.gene012587.t1
chr8.1 exon 2369707 2369937 2369707 ID=MS.gene012587.t1.exon6;Parent=MS.gene012587.t1
chr8.1 CDS 2369707 2369937 2369707 ID=cds.MS.gene012587.t1;Parent=MS.gene012587.t1
Gene Sequence

>MS.gene012587

ATGGACTACAGCTCTGAAGAAGAGTCAGATATCAGTGAGTCTGAGATTGAGGAATACTCTGACAAACCTTATAAGGAGTTAAAGGATGGTAAATACAAAGTGAAGAACTTAAACGGCACACTCAGGTGCCCATATTGTGCTGGAAAAAAGAAGCAAGAGTTCAAATATAAGGATTTGATGCAACATGCAACCGGAGTAAGCAAAGGTTCAGCAAACAGAAACGCCAAACAAAAGGCAAACCACCTTGCTCTGGCAAAGTATTTGGAGACCGACCTAGTAAATGAAGCAGACCAAATACCTCCCCCGGCTTTGGCCGAAGCTGTCAACCAACCTGCACCGCAGGTTGAGAATTATGTCTGGCCATGGACAGGCATAATCGTTAACATTAAGAGCAACCTTAATGATTCTGGATACTGGCTAAAGGAATTTGCCAAGTACAGACCATTGGATGTCCATGTATTCTTCATGGATGGTGACACTCAGGCTGTAGTAGACTTCAACAATGACTGGAATGGTTTCATGAATGCAAGTGAATTTGAGAAATCCTTTGAAACTAAACATCATGGGAAGAAGGACTGGAATTCAAAGGACATGCAGGCCAGTTCAGACATTTATGGATGGGTTGCACGTGAAGATGATTATAATTGTGGAGGGCCAATCGGGGAGTACCTTCGGAACAAAGGAAGGCTGAGAACAATTTCTGATATTGTTCAAGAAGCATCTGAAAGCAGAAATAGCATTGTGGAAAACCTGGCCAATGAAATTGACATTACAAATGAAAACCTCAACAAAATGCAGTATAAGTATAATGAGAAGACCATGTCCTTAAGTAGGATGCTGGAGGAGAAAGACAGGCTTCACAATGCTTTTGTTGAAGGTTTGTATAATGTCTGTTAGAATCTGATTTTGCCTTATTGTATGTAAAGGCTGTGTGCTTCATGTTTGGCCATGTATGTTTTTCTATTCTTGTACGTTCATTGAAGCAGAAGAGTAGAAAAAAACTTGCATAGGTTTTAATGCTACAAAAATGTCTCTCTCACTTTTTTTTTTTTTTTTTTATTTTATTATTAGAGTCAAGGAGTATGCAGCGTAAAGCCCGTGAGGAGGTACGAAGGATCTTGGAAGAACAAGAAAAGTTGCGTAATGAATTGGATGAAAAAATGCGGAAGCTTGATACCTGGAGCAGAGATCTAAATAAGCGTGAGGTACTAACTGATCAAGAGAGGCAGAAACTGGAAGAGGACAAGAAAAAGGTATATTTTGCATTTTTCAATTAGTATATGCACATTTTAAATATTTTTTGTTGCTGGTCATAACTCATACGTTATCTACCATTGTCCTTGCAAAAAATTAGACCTGTCTTTGTCGATGGTATCCTACCAATGTCCTTGGTTGCTCTTGATTTGCATAACAAAGTGCTTTATTTTGATCCTATTCACTCCCTTTAAGTGAATCCCAACTTTCGTTGGCCTTCCACCATCTGCTAATTGGACTAAGAGTCTATATGCCAAAAGCTTTTGATTATTGTGAGGAAATATCAATGTATACTATATATATGGTTTTAGTTTTTTTTTTTTTTTTTTTAACAAATATATGGTTTTAGTTTTAACTACCACATTTATGTTGAAATTTCGTTATAAAGATTTGTAGTTAAATATTAGTGTGCATTTTTTCATTTGAAAAATCATCCTTTTATTTTTTTAATTAAAAAGTCATCTTTCAAAATCCATAAAAAACCACATCTGCCCGATGTGTTTTCTTTCATCCCACTTTCTAATCTCTACTTGCTTGATGTGCCTCAAGACTTTAAAATCATCATCATGTATGTGTACTTCCTCAAGATTCAAATATTACTTCTGTCTTTCTAGAAAGACTCGAGGAATGAATCACTCTTGTTGGCTTCAAAGGAGCAGAAGATAGCTGATGAGAATGTCTTCAGGCTTGTTGAAGAGCAAAAGGTTTGCCCTCTATTTACTCTTGTTTATAAAAAGACAACACTACAACAGCGTATGCTTTTTTCTTTTAATCACTTATCAATGTTATCATCCATTGTGAATGTCTTCTGCTGATTTGGATTTCCAAACTACCAGAGAGAAAAAGAAGAGGCCTTAAACAAGATCCTTCAATTGGAAAAGCAACTAGATGCCAAACAAAAATTAGAAATGGAGATTGAGGAACTAAAAGGGAAATTGCAAGTTATGAAACATCTTGGAGATCAAGATGATGAAGCTATTAAGAAAAAAATGGAAGAAATGAGCACTGAATTGGCAGACAAAATAGAAAGTTTGGAGGATATGGAGTCTATGAATCAAACCCTCATTGTCAAGGAGCGCCAGAGCAATGATGAACTACAGGAAGCTCGTAAAGAGTTAATAATTGTATGATCTCATTTACTTTATCTCAATTTTTTTTTTAATTCTATATAAAAGGAAATGTTACTCGTACTTGTTGCATCCTTTTAACCTTTATCGTCTTGTATTCTTAACGATAACCAACTAACAAGTTGCATAGATTTCTTCAGGCTAAGTTGTAAAGTACCTGCGTGAAGATCATCTCTACCTTTCTTTAGGAAATAAGAATTTTGATATTTTGTTGTTCTGCTGTGAATATATTGTGGGAGACTAAAGTTGTTCCCCCTCATTTTTCTCTCTCTAATTTCTATTGTTTTAGGGGTTAAATGAAATGCTGAAGGGTAATAATAAAACTAATATTGGGACGAAAAGAATGGGAGACCTTGATGAGAAGGTTTTTGTGAAAGTCTGCAAGAAAAGATTTCTTTCTCAAGAAGAAGCTGGGATGAAGGCCATGGAGCTTTGCTCTGTTTGGCAGGAGAATGTGAAAAATTCAGCATGGCACCCTTTTAAAGTGGTCAGAGTGAATGATACCCATGAGGTATGTACTATAAAGACATGCTCTGTGTGTTTGTAGTAGTTATGCCTCAATTTAGAAATAGTATAATAATTAACACGGTAATACTGTTATATTGACACAGTCAGTTATAGATGAGGAAGATGAGAAATTAAAAAAGCTCAAGCAGGAATGGGGAGATGAGATATATTCAGCTGTTGAAACAGCCTTGAAAGAAGTAAATGAATACAACCCAAGTGGTGGGTATGCTGTACATGAGCTATGGAACTTCAAGGAACAGAGGAAGGCAACACTAAAAGAAGTTATTACTTATATCGTGGAACATATGAAGCAACTTAAGCGCAAGAGAGGATAG
Protein sequence

>MS.gene012587.t1

MDYSSEEESDISESEIEEYSDKPYKELKDGKYKVKNLNGTLRCPYCAGKKKQEFKYKDLMQHATGVSKGSANRNAKQKANHLALAKYLETDLVNEADQIPPPALAEAVNQPAPQVENYVWPWTGIIVNIKSNLNDSGYWLKEFAKYRPLDVHVFFMDGDTQAVVDFNNDWNGFMNASEFEKSFETKHHGKKDWNSKDMQASSDIYGWVAREDDYNCGGPIGEYLRNKGRLRTISDIVQEASESRNSIVENLANEIDITNENLNKMQYKYNEKTMSLSRMLEEKDRLHNAFVEESRSMQRKAREEVRRILEEQEKLRNELDEKMRKLDTWSRDLNKREVLTDQERQKLEEDKKKKDSRNESLLLASKEQKIADENVFRLVEEQKREKEEALNKILQLEKQLDAKQKLEMEIEELKGKLQVMKHLGDQDDEAIKKKMEEMSTELADKIESLEDMESMNQTLIVKERQSNDELQEARKELIIGLNEMLKGNNKTNIGTKRMGDLDEKVFVKVCKKRFLSQEEAGMKAMELCSVWQENVKNSAWHPFKVVRVNDTHESVIDEEDEKLKKLKQEWGDEIYSAVETALKEVNEYNPSGGYAVHELWNFKEQRKATLKEVITYIVEHMKQLKRKRG