Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042282.t1 | RHN64611.1 | 71.5 | 629 | 88 | 2 | 1 | 538 | 1 | 629 | 1.00E-212 | 749.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042282.t1 | F4JH53 | 40.3 | 633 | 276 | 8 | 5 | 537 | 4 | 634 | 2.0e-108 | 394.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042282.t1 | A0A396IIA7 | 71.5 | 629 | 88 | 2 | 1 | 538 | 1 | 629 | 7.3e-213 | 749.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene042282 | MS.gene012490 | PPI |
| MS.gene042282 | MS.gene035571 | PPI |
| MS.gene042282 | MS.gene91547 | PPI |
| MS.gene042282 | MS.gene044806 | PPI |
| MS.gene042282 | MS.gene73119 | PPI |
| MS.gene053226 | MS.gene042282 | PPI |
| MS.gene042282 | MS.gene62095 | PPI |
| MS.gene62095 | MS.gene042282 | PPI |
| MS.gene042282 | MS.gene012589 | PPI |
| MS.gene001928 | MS.gene042282 | PPI |
| MS.gene042282 | MS.gene88066 | PPI |
| MS.gene042282 | MS.gene86666 | PPI |
| MS.gene042282 | MS.gene012586 | PPI |
| MS.gene034251 | MS.gene042282 | PPI |
| MS.gene44056 | MS.gene042282 | PPI |
| MS.gene40741 | MS.gene042282 | PPI |
| MS.gene035805 | MS.gene042282 | PPI |
| MS.gene042282 | MS.gene000608 | PPI |
| MS.gene042282 | MS.gene042280 | PPI |
| MS.gene042281 | MS.gene042282 | PPI |
| MS.gene012587 | MS.gene042282 | PPI |
| MS.gene042282 | MS.gene52620 | PPI |
| MS.gene042282 | MS.gene035629 | PPI |
| MS.gene042282 | MS.gene064542 | PPI |
| MS.gene005189 | MS.gene042282 | PPI |
| MS.gene035570 | MS.gene042282 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042282.t1 | MTR_4g131350 | 88.337 | 523 | 58 | 1 | 1 | 520 | 54 | 576 | 0.0 | 882 |
| MS.gene042282.t1 | MTR_4g125920 | 86.567 | 536 | 67 | 2 | 1 | 531 | 1 | 536 | 0.0 | 881 |
| MS.gene042282.t1 | MTR_4g006760 | 79.835 | 486 | 92 | 4 | 22 | 504 | 22 | 504 | 0.0 | 750 |
| MS.gene042282.t1 | MTR_4g131310 | 72.830 | 530 | 71 | 6 | 1 | 530 | 1 | 457 | 0.0 | 678 |
| MS.gene042282.t1 | MTR_3g067815 | 40.000 | 525 | 290 | 9 | 1 | 505 | 1 | 520 | 1.14e-118 | 364 |
| MS.gene042282.t1 | MTR_5g079940 | 38.246 | 536 | 291 | 13 | 4 | 505 | 471 | 1000 | 4.37e-96 | 316 |
| MS.gene042282.t1 | MTR_5g079940 | 33.562 | 146 | 84 | 5 | 1 | 144 | 1 | 135 | 1.48e-15 | 80.5 |
| MS.gene042282.t1 | MTR_5g079940 | 39.423 | 104 | 53 | 4 | 1 | 103 | 117 | 211 | 1.96e-14 | 77.0 |
| MS.gene042282.t1 | MTR_5g079940 | 38.372 | 86 | 48 | 2 | 19 | 103 | 247 | 328 | 2.90e-13 | 73.2 |
| MS.gene042282.t1 | MTR_5g079940 | 37.624 | 101 | 59 | 3 | 5 | 101 | 353 | 453 | 5.28e-11 | 66.2 |
| MS.gene042282.t1 | MTR_2g097020 | 32.000 | 550 | 290 | 15 | 13 | 505 | 10 | 532 | 2.04e-59 | 208 |
| MS.gene042282.t1 | MTR_4g046643 | 31.845 | 515 | 301 | 13 | 33 | 505 | 32 | 538 | 1.26e-56 | 202 |
| MS.gene042282.t1 | MTR_2g095400 | 33.333 | 522 | 305 | 14 | 13 | 505 | 10 | 517 | 6.62e-56 | 198 |
| MS.gene042282.t1 | MTR_2g097010 | 32.270 | 533 | 296 | 13 | 26 | 505 | 23 | 543 | 3.87e-53 | 191 |
| MS.gene042282.t1 | MTR_4g126200 | 41.463 | 123 | 61 | 3 | 383 | 505 | 3 | 114 | 3.10e-15 | 76.3 |
| MS.gene042282.t1 | MTR_2g097000 | 43.836 | 146 | 75 | 4 | 363 | 505 | 113 | 254 | 1.28e-13 | 73.2 |
| MS.gene042282.t1 | MTR_3g067845 | 38.583 | 127 | 72 | 2 | 380 | 503 | 6 | 129 | 9.29e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042282.t1 | AT1G15910 | 51.703 | 499 | 225 | 7 | 18 | 503 | 17 | 512 | 2.91e-167 | 488 |
| MS.gene042282.t1 | AT4G00380 | 51.102 | 499 | 227 | 6 | 19 | 503 | 18 | 513 | 7.98e-164 | 479 |
| MS.gene042282.t1 | AT4G00380 | 51.102 | 499 | 227 | 6 | 19 | 503 | 18 | 513 | 7.98e-164 | 479 |
| MS.gene042282.t1 | AT4G00380 | 47.379 | 496 | 222 | 7 | 19 | 503 | 18 | 485 | 2.62e-145 | 431 |
| MS.gene042282.t1 | AT1G80790 | 48.682 | 493 | 235 | 8 | 19 | 498 | 19 | 506 | 8.81e-144 | 428 |
| MS.gene042282.t1 | AT1G80790 | 48.682 | 493 | 235 | 8 | 19 | 498 | 19 | 506 | 8.81e-144 | 428 |
| MS.gene042282.t1 | AT1G80790 | 48.936 | 423 | 203 | 6 | 19 | 431 | 19 | 438 | 3.41e-134 | 398 |
| MS.gene042282.t1 | AT3G48670 | 36.523 | 512 | 294 | 8 | 16 | 505 | 21 | 523 | 2.57e-97 | 309 |
| MS.gene042282.t1 | AT3G48670 | 36.523 | 512 | 294 | 8 | 16 | 505 | 21 | 523 | 2.57e-97 | 309 |
| MS.gene042282.t1 | AT3G48670 | 36.523 | 512 | 294 | 8 | 16 | 505 | 21 | 523 | 2.57e-97 | 309 |
| MS.gene042282.t1 | AT3G12550 | 32.630 | 521 | 307 | 12 | 16 | 503 | 5 | 514 | 3.75e-73 | 243 |
| MS.gene042282.t1 | AT3G12550 | 32.630 | 521 | 307 | 12 | 16 | 503 | 5 | 514 | 2.37e-72 | 243 |
| MS.gene042282.t1 | AT3G12550 | 32.630 | 521 | 307 | 12 | 16 | 503 | 5 | 514 | 2.37e-72 | 243 |
| MS.gene042282.t1 | AT3G12550 | 32.630 | 521 | 307 | 12 | 16 | 503 | 5 | 514 | 2.37e-72 | 243 |
| MS.gene042282.t1 | AT3G12550 | 32.630 | 521 | 307 | 12 | 16 | 503 | 5 | 514 | 3.45e-72 | 242 |
| MS.gene042282.t1 | AT1G13790 | 33.666 | 401 | 236 | 7 | 118 | 499 | 219 | 608 | 1.91e-51 | 187 |
| MS.gene042282.t1 | AT1G13790 | 36.364 | 77 | 49 | 0 | 12 | 88 | 3 | 79 | 4.16e-12 | 69.3 |
| MS.gene042282.t1 | AT1G13790 | 33.666 | 401 | 236 | 7 | 118 | 499 | 219 | 608 | 1.91e-51 | 187 |
| MS.gene042282.t1 | AT1G13790 | 36.364 | 77 | 49 | 0 | 12 | 88 | 3 | 79 | 4.16e-12 | 69.3 |
| MS.gene042282.t1 | AT5G59390 | 32.048 | 415 | 242 | 11 | 112 | 503 | 28 | 425 | 7.40e-47 | 172 |
| MS.gene042282.t1 | AT5G59390 | 32.048 | 415 | 242 | 11 | 112 | 503 | 28 | 425 | 7.40e-47 | 172 |
| MS.gene042282.t1 | AT5G59390 | 32.048 | 415 | 242 | 11 | 112 | 503 | 28 | 425 | 7.40e-47 | 172 |
| MS.gene042282.t1 | AT4G01180 | 31.051 | 409 | 247 | 9 | 114 | 503 | 28 | 420 | 8.01e-46 | 169 |
| MS.gene042282.t1 | AT5G59390 | 31.667 | 420 | 242 | 12 | 112 | 503 | 28 | 430 | 1.21e-44 | 166 |
| MS.gene042282.t1 | AT5G59390 | 31.667 | 420 | 242 | 12 | 112 | 503 | 28 | 430 | 1.21e-44 | 166 |
| MS.gene042282.t1 | AT4G01780 | 29.206 | 315 | 138 | 7 | 172 | 483 | 111 | 343 | 2.44e-26 | 112 |
| MS.gene042282.t1 | AT2G16490 | 35.714 | 154 | 69 | 5 | 408 | 537 | 1 | 148 | 1.89e-15 | 75.1 |
Find 124 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTGAAGGATCTTGTTTA+AGG | 0.184121 | 8.2:-3775206 | None:intergenic |
| GGTAATAATAAAACTAATAT+TGG | 0.209949 | 8.2:+3775781 | MS.gene042282:CDS |
| CCATCCTTTAACTCCTTATA+AGG | 0.231876 | 8.2:-3772891 | None:intergenic |
| AAGAGCAACCTTAATGATTC+TGG | 0.249360 | 8.2:+3773212 | MS.gene042282:CDS |
| GAAGAAAGAGTTCAAATATA+AGG | 0.256178 | 8.2:+3772974 | MS.gene042282:CDS |
| CAAACCTTATAAGGAGTTAA+AGG | 0.267169 | 8.2:+3772887 | MS.gene042282:CDS |
| GCCAGTATCCAGAATCATTA+AGG | 0.269275 | 8.2:-3773220 | None:intergenic |
| ATGGAGATTGAGGAACTAAA+AGG | 0.270338 | 8.2:+3775262 | MS.gene042282:CDS |
| CTCCTCCAGCATCCTACTTA+TGG | 0.276527 | 8.2:-3773648 | None:intergenic |
| TACTGAATTGGAAGAAAGTT+TGG | 0.280963 | 8.2:+3775357 | MS.gene042282:CDS |
| CAGGCCAGTTCAGACATTTA+TGG | 0.299736 | 8.2:+3773419 | MS.gene042282:CDS |
| ATACTCTGACAAACCTTATA+AGG | 0.314776 | 8.2:+3772878 | MS.gene042282:CDS |
| CAGCATACCCTTCAGCATTA+AGG | 0.320481 | 8.2:-3775822 | None:intergenic |
| AGAAGAAATGAGTACTGAAT+TGG | 0.330488 | 8.2:+3775345 | MS.gene042282:CDS |
| ATTTGTAATGTCAATTTCAT+TGG | 0.353548 | 8.2:-3773579 | None:intergenic |
| GGAAAAGTTGCGTAATGAAT+TGG | 0.355859 | 8.2:+3773954 | MS.gene042282:CDS |
| TTTGGTCTGCTTCATTTACT+AGG | 0.363332 | 8.2:-3773097 | None:intergenic |
| AGGAAGGCTGAGAACAATTT+CGG | 0.365624 | 8.2:+3773505 | MS.gene042282:CDS |
| CGATCAAGAGAGGCAGAAAC+TGG | 0.373050 | 8.2:+3774038 | MS.gene042282:CDS |
| GAGGAATGTGTTACTCTTGT+TGG | 0.383010 | 8.2:+3774971 | MS.gene042282:CDS |
| TGAGGAGGTGCGAAGGATCT+TGG | 0.385235 | 8.2:+3773924 | MS.gene042282:CDS |
| ACCTTAATGATTCTGGATAC+TGG | 0.387551 | 8.2:+3773219 | MS.gene042282:CDS |
| TTGCAAGTTATGAAACATCT+TGG | 0.395938 | 8.2:+3775289 | MS.gene042282:CDS |
| GGCCAATCGGGGAGTACCTT+CGG | 0.401670 | 8.2:+3773477 | MS.gene042282:CDS |
| CTTAAACAAGATCCTTCAAT+TGG | 0.401905 | 8.2:+3775207 | MS.gene042282:CDS |
| CTTGTAGTTCATCATTGCTC+TGG | 0.417100 | 8.2:-3775423 | None:intergenic |
| GGATGTCCATGTATTCTTCA+TGG | 0.417376 | 8.2:+3773271 | MS.gene042282:CDS |
| CAGGCTTATTGAAGAGCAAA+AGG | 0.427969 | 8.2:+3775031 | MS.gene042282:CDS |
| GTAATAATAAAACTAATATT+GGG | 0.428154 | 8.2:+3775782 | MS.gene042282:CDS |
| GTCTGCTTCATTTACTAGGT+CGG | 0.430421 | 8.2:-3773093 | None:intergenic |
| CACAAAGTGAAGAATTTAAA+CGG | 0.430749 | 8.2:+3772918 | MS.gene042282:CDS |
| TGAAAGAGAAAATAGAAAAT+CGG | 0.433278 | 8.2:+3773547 | MS.gene042282:CDS |
| TTGACAGCTTCGACCAAAGC+CGG | 0.434672 | 8.2:-3773128 | None:intergenic |
| TATAATTGTGGAGGGCCAAT+CGG | 0.436933 | 8.2:+3773464 | MS.gene042282:CDS |
| CCCATGATGTTTAGTTTCAA+AGG | 0.437487 | 8.2:-3773369 | None:intergenic |
| AAACAGAAACGCCAAACAAA+AGG | 0.444045 | 8.2:+3773037 | MS.gene042282:CDS |
| AGATCCTTCGCACCTCCTCA+TGG | 0.450183 | 8.2:-3773921 | None:intergenic |
| GTTACTCTTGTTGGCTTCAA+AGG | 0.451311 | 8.2:+3774980 | MS.gene042282:CDS |
| TAATTCTCAACCTGCGGTAC+AGG | 0.455932 | 8.2:-3773155 | None:intergenic |
| GCGAAGGATCTTGGAAGAAC+AGG | 0.456862 | 8.2:+3773933 | MS.gene042282:CDS |
| CAGTTTCTGCCTCTCTTGAT+CGG | 0.457451 | 8.2:-3774037 | None:intergenic |
| ATAATTGTGGAGGGCCAATC+GGG | 0.458752 | 8.2:+3773465 | MS.gene042282:CDS |
| TGGAGATTGAGGAACTAAAA+GGG | 0.462021 | 8.2:+3775263 | MS.gene042282:CDS |
| TAGCTGATGAGAATGTCTTC+AGG | 0.469727 | 8.2:+3775012 | MS.gene042282:CDS |
| TCCTTTGAAACTAAACATCA+TGG | 0.472800 | 8.2:+3773368 | MS.gene042282:CDS |
| ATTTGAGCTATGGAACTTCA+AGG | 0.478463 | 8.2:+3775846 | MS.gene042282:CDS |
| TTCCGAAGGTACTCCCCGAT+TGG | 0.479350 | 8.2:-3773479 | None:intergenic |
| TGCTGAACCTTTGCTTACTC+CGG | 0.483792 | 8.2:-3773015 | None:intergenic |
| CCATCCATAAATGTCTGAAC+TGG | 0.485326 | 8.2:-3773423 | None:intergenic |
| TGACAGCTTCGACCAAAGCC+GGG | 0.488259 | 8.2:-3773127 | None:intergenic |
| TAATATTGGGACGAAAAGAA+TGG | 0.490015 | 8.2:+3775795 | MS.gene042282:CDS |
| CACCATCCATGAAGAATACA+TGG | 0.492568 | 8.2:-3773277 | None:intergenic |
| AAAGGCAAACCACCTCGCTC+TGG | 0.499352 | 8.2:+3773055 | MS.gene042282:CDS |
| GATTTGATGCAACATGCAAC+CGG | 0.499938 | 8.2:+3772996 | MS.gene042282:CDS |
| AAAATTAGAAATGGAGATTG+AGG | 0.501255 | 8.2:+3775252 | MS.gene042282:CDS |
| TCAGCCTTCCTTTGTTCCGA+AGG | 0.504609 | 8.2:-3773493 | None:intergenic |
| GGATGCTGGAGGAGAAAGAC+AGG | 0.505595 | 8.2:+3773657 | MS.gene042282:CDS |
| TAATGTCAATTTCATTGGCT+AGG | 0.506445 | 8.2:-3773574 | None:intergenic |
| CAGTTCAGACATTTATGGAT+GGG | 0.508021 | 8.2:+3773424 | MS.gene042282:CDS |
| GAAGAAGGAATGGAATTCAA+TGG | 0.511745 | 8.2:+3773391 | MS.gene042282:CDS |
| TATCAGTGAGTCTGAGATTG+AGG | 0.513014 | 8.2:+3772854 | MS.gene042282:CDS |
| CATGTCCATAAGTAGGATGC+TGG | 0.514097 | 8.2:+3773643 | MS.gene042282:CDS |
| AACATCATGGGAAGAAGGAA+TGG | 0.514921 | 8.2:+3773381 | MS.gene042282:CDS |
| CGCAGGTTGAGAATTATGTC+TGG | 0.517832 | 8.2:+3773162 | MS.gene042282:CDS |
| AATTATGTCTGGCCATGGAC+AGG | 0.519380 | 8.2:+3773173 | MS.gene042282:CDS |
| CTCAGGTGCCCATATTGTGC+TGG | 0.519768 | 8.2:+3772945 | MS.gene042282:CDS |
| AACTAAACATCATGGGAAGA+AGG | 0.520666 | 8.2:+3773376 | MS.gene042282:CDS |
| CCAGTTCAGACATTTATGGA+TGG | 0.523268 | 8.2:+3773423 | MS.gene042282:CDS |
| AATATTGGGACGAAAAGAAT+GGG | 0.525422 | 8.2:+3775796 | MS.gene042282:CDS |
| ATTTGCAAAGTACAGACCAT+TGG | 0.526943 | 8.2:+3773250 | MS.gene042282:CDS |
| CTTATTTAGATCTCTGCTCC+AGG | 0.528367 | 8.2:-3774001 | None:intergenic |
| GATCCTTCGCACCTCCTCAT+GGG | 0.531486 | 8.2:-3773920 | None:intergenic |
| ATGGAATTCAATGGACATGC+AGG | 0.532227 | 8.2:+3773400 | MS.gene042282:CDS |
| GGGGTTAAATGAAATGCTGA+AGG | 0.533320 | 8.2:+3775759 | MS.gene042282:intron |
| CGTGAAGATGATTATAATTG+TGG | 0.540581 | 8.2:+3773452 | MS.gene042282:CDS |
| TGATTCTGGATACTGGCTAA+AGG | 0.547223 | 8.2:+3773226 | MS.gene042282:CDS |
| TAGTAGACTTCATCAATGAC+TGG | 0.548076 | 8.2:+3773312 | MS.gene042282:CDS |
| CTTCATGGATGGTGACACTC+AGG | 0.551198 | 8.2:+3773286 | MS.gene042282:CDS |
| AAATGCGGAAGCTTGATACC+TGG | 0.551489 | 8.2:+3773983 | MS.gene042282:CDS |
| ACTGGAAGAGGACAAGAAGA+AGG | 0.555312 | 8.2:+3774056 | MS.gene042282:CDS |
| TTGAGAATTATGTCTGGCCA+TGG | 0.559406 | 8.2:+3773168 | MS.gene042282:CDS |
| AGAGGATCATGTCCATAAGT+AGG | 0.561441 | 8.2:+3773636 | MS.gene042282:CDS |
| ATGGGAGACCTTAATGCTGA+AGG | 0.562568 | 8.2:+3775814 | MS.gene042282:CDS |
| TGAATTGGAAGAAAGTTTGG+AGG | 0.564539 | 8.2:+3775360 | MS.gene042282:CDS |
| TGTCAACCAACCTGTACCGC+AGG | 0.572117 | 8.2:+3773145 | MS.gene042282:CDS |
| TCTGGCGCTCCTTGTCAATG+AGG | 0.572379 | 8.2:-3775405 | None:intergenic |
| GGTATGCTGAATTTGAGCTA+TGG | 0.573218 | 8.2:+3775836 | MS.gene042282:CDS |
| AGCAGACCAAATACCTCCCC+CGG | 0.574685 | 8.2:+3773109 | MS.gene042282:CDS |
| GACTTCATCAATGACTGGAA+TGG | 0.577060 | 8.2:+3773317 | MS.gene042282:CDS |
| ACTTAAGCGCAAGAGAGGAT+AGG | 0.584806 | 8.2:+3775927 | MS.gene042282:CDS |
| GAAGATGATTATAATTGTGG+AGG | 0.585641 | 8.2:+3773455 | MS.gene042282:CDS |
| AGAAGTTATTACTTATATCG+TGG | 0.586754 | 8.2:+3775891 | MS.gene042282:CDS |
| AGTACCTTCGGAACAAAGGA+AGG | 0.587192 | 8.2:+3773489 | MS.gene042282:CDS |
| AGAGAGGCAGAAACTGGAAG+AGG | 0.587763 | 8.2:+3774044 | MS.gene042282:CDS |
| TGGGAGACCTTAATGCTGAA+GGG | 0.590968 | 8.2:+3775815 | MS.gene042282:CDS |
| AAGAATACATGGACATCCAA+TGG | 0.592903 | 8.2:-3773266 | None:intergenic |
| GACAGCTTCGACCAAAGCCG+GGG | 0.593808 | 8.2:-3773126 | None:intergenic |
| TTAACAATTATGCCTGTCCA+TGG | 0.594850 | 8.2:-3773185 | None:intergenic |
| GTCCATGTATTCTTCATGGA+TGG | 0.597803 | 8.2:+3773275 | MS.gene042282:CDS |
| CCTTATAAGGAGTTAAAGGA+TGG | 0.598931 | 8.2:+3772891 | MS.gene042282:CDS |
| GAACTTCAAGGAACAGAGGA+AGG | 0.602992 | 8.2:+3775858 | MS.gene042282:CDS |
| AGAATTTAAACGGCACACTC+AGG | 0.609073 | 8.2:+3772928 | MS.gene042282:CDS |
| GGGGAGTACCTTCGGAACAA+AGG | 0.609491 | 8.2:+3773485 | MS.gene042282:CDS |
| AAGCAACTTAAGCGCAAGAG+AGG | 0.619700 | 8.2:+3775922 | MS.gene042282:CDS |
| TGCAGTATAAGTATAATGAG+AGG | 0.621962 | 8.2:+3773618 | MS.gene042282:CDS |
| AAGCCCATGAGGAGGTGCGA+AGG | 0.622847 | 8.2:+3773917 | MS.gene042282:CDS |
| AGGTACTAACCGATCAAGAG+AGG | 0.623269 | 8.2:+3774028 | MS.gene042282:CDS |
| TATTAGAGTCAAGGAGTATG+CGG | 0.623386 | 8.2:+3773890 | MS.gene042282:intron |
| TCTCAACCTGCGGTACAGGT+TGG | 0.626635 | 8.2:-3773151 | None:intergenic |
| CCTTTGAAACTAAACATCAT+GGG | 0.626908 | 8.2:+3773369 | MS.gene042282:CDS |
| AAGATGATTATAATTGTGGA+GGG | 0.627167 | 8.2:+3773456 | MS.gene042282:CDS |
| CATGCAACCGGAGTAAGCAA+AGG | 0.637786 | 8.2:+3773008 | MS.gene042282:CDS |
| GGGTTAAATGAAATGCTGAA+GGG | 0.639837 | 8.2:+3775760 | MS.gene042282:CDS |
| GAATCAAATCCTCATTGACA+AGG | 0.659917 | 8.2:+3775396 | MS.gene042282:CDS |
| GTCCATAAGTAGGATGCTGG+AGG | 0.664077 | 8.2:+3773646 | MS.gene042282:CDS |
| AAAACTTTGCCAGAGCGAGG+TGG | 0.669720 | 8.2:-3773064 | None:intergenic |
| ACAGCTTCGACCAAAGCCGG+GGG | 0.670168 | 8.2:-3773125 | None:intergenic |
| CAGAGATCTAAATAAGCGTG+AGG | 0.673270 | 8.2:+3774008 | MS.gene042282:CDS |
| CAGACATAATTCTCAACCTG+CGG | 0.676717 | 8.2:-3773161 | None:intergenic |
| TAATTGTGGAGGGCCAATCG+GGG | 0.679230 | 8.2:+3773466 | MS.gene042282:CDS |
| GCGGCGTAAAGCCCATGAGG+AGG | 0.682401 | 8.2:+3773909 | MS.gene042282:CDS |
| TATGGAACTTCAAGGAACAG+AGG | 0.683112 | 8.2:+3775854 | MS.gene042282:CDS |
| TGTCCTTCTAGAAAGACTCG+AGG | 0.692197 | 8.2:+3774952 | MS.gene042282:intron |
| TATGCGGCGTAAAGCCCATG+AGG | 0.709522 | 8.2:+3773906 | MS.gene042282:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAATAATAAAACTAATATT+GGG | + | chr8.2:3775782-3775801 | MS.gene042282:CDS | 10.0% |
| !!! | TTTTTAATCCAAAAAAATAA+AGG | - | chr8.2:3774784-3774803 | None:intergenic | 10.0% |
| !! | ATAAATTCTATTCATTAGAT+TGG | - | chr8.2:3774619-3774638 | None:intergenic | 15.0% |
| !! | ATGCATATATAAAATAAGAT+GGG | + | chr8.2:3774549-3774568 | MS.gene042282:intron | 15.0% |
| !! | GGTAATAATAAAACTAATAT+TGG | + | chr8.2:3775781-3775800 | MS.gene042282:CDS | 15.0% |
| !! | TCTAATGAATAGAATTTATT+TGG | + | chr8.2:3774620-3774639 | MS.gene042282:intron | 15.0% |
| !!! | AAAATCATCCTTTATTTTTT+TGG | + | chr8.2:3774773-3774792 | MS.gene042282:intron | 15.0% |
| !!! | TTATTTTATTATTAGAGTCA+AGG | + | chr8.2:3773881-3773900 | MS.gene042282:intron | 15.0% |
| !!! | TTTATACAAATATATGGTTT+TGG | + | chr8.2:3774393-3774412 | MS.gene042282:intron | 15.0% |
| !! | ATTTGTAATGTCAATTTCAT+TGG | - | chr8.2:3773582-3773601 | None:intergenic | 20.0% |
| !! | CATGCATATATAAAATAAGA+TGG | + | chr8.2:3774548-3774567 | MS.gene042282:intron | 20.0% |
| !! | TCTAATGTTCTTGTAATATT+AGG | + | chr8.2:3774656-3774675 | MS.gene042282:intron | 20.0% |
| !! | TGAAAGAGAAAATAGAAAAT+CGG | + | chr8.2:3773547-3773566 | MS.gene042282:CDS | 20.0% |
| !! | TGAAATATCAATGTATACTT+TGG | + | chr8.2:3774357-3774376 | MS.gene042282:intron | 20.0% |
| !! | TGCATATATAAAATAAGATG+GGG | + | chr8.2:3774550-3774569 | MS.gene042282:intron | 20.0% |
| !!! | AATTCTTATTTCCTAAAGAA+AGG | - | chr8.2:3775653-3775672 | None:intergenic | 20.0% |
| !!! | GTCTAATTTCTATTGTTTTA+GGG | + | chr8.2:3775739-3775758 | MS.gene042282:intron | 20.0% |
| !!! | TAAAAAAAAAGCACTTTGTT+AGG | - | chr8.2:3774237-3774256 | None:intergenic | 20.0% |
| !!! | TCTAATTTCTATTGTTTTAG+GGG | + | chr8.2:3775740-3775759 | MS.gene042282:intron | 20.0% |
| !!! | TGTCTAATTTCTATTGTTTT+AGG | + | chr8.2:3775738-3775757 | MS.gene042282:intron | 20.0% |
| !!! | TTTTAAATGTTTTTTGTTGC+TGG | + | chr8.2:3774112-3774131 | MS.gene042282:intron | 20.0% |
| ! | AAAAGTTGGATTCACTTAAA+GGG | - | chr8.2:3774271-3774290 | None:intergenic | 25.0% |
| ! | AAAATTAGAAATGGAGATTG+AGG | + | chr8.2:3775252-3775271 | MS.gene042282:CDS | 25.0% |
| ! | AAACACAAAAAATGAAGGAA+AGG | + | chr8.2:3774452-3774471 | MS.gene042282:intron | 25.0% |
| ! | AAATTAGACAGAGAAAAATG+AGG | - | chr8.2:3775728-3775747 | None:intergenic | 25.0% |
| ! | AAGATGATTATAATTGTGGA+GGG | + | chr8.2:3773456-3773475 | MS.gene042282:CDS | 25.0% |
| ! | AATTAGACAGAGAAAAATGA+GGG | - | chr8.2:3775727-3775746 | None:intergenic | 25.0% |
| ! | ACAAGAAGATAAAGGTTAAA+AGG | - | chr8.2:3775549-3775568 | None:intergenic | 25.0% |
| ! | AGAAGTTATTACTTATATCG+TGG | + | chr8.2:3775891-3775910 | MS.gene042282:CDS | 25.0% |
| ! | ATGAATTGGATGAAAAAATG+CGG | + | chr8.2:3773968-3773987 | MS.gene042282:CDS | 25.0% |
| ! | CACAAAGTGAAGAATTTAAA+CGG | + | chr8.2:3772918-3772937 | MS.gene042282:CDS | 25.0% |
| ! | GAAGAAAGAGTTCAAATATA+AGG | + | chr8.2:3772974-3772993 | MS.gene042282:CDS | 25.0% |
| ! | GAAGTAATATTTGAATCTTG+AGG | - | chr8.2:3774930-3774949 | None:intergenic | 25.0% |
| ! | TAAAAGTTGGATTCACTTAA+AGG | - | chr8.2:3774272-3774291 | None:intergenic | 25.0% |
| ! | TATAAACGAGAGTAAATAGA+GGG | - | chr8.2:3775061-3775080 | None:intergenic | 25.0% |
| ! | TATCCAAACACAAAAAATGA+AGG | + | chr8.2:3774447-3774466 | MS.gene042282:intron | 25.0% |
| ! | TCAAGAATACAAGAAGATAA+AGG | - | chr8.2:3775557-3775576 | None:intergenic | 25.0% |
| ! | TGCCAAACAAAAATTAGAAA+TGG | + | chr8.2:3775243-3775262 | MS.gene042282:CDS | 25.0% |
| ! | TTATAAACGAGAGTAAATAG+AGG | - | chr8.2:3775062-3775081 | None:intergenic | 25.0% |
| !! | AGTAATAACTTCTTTTAGTG+TGG | - | chr8.2:3775884-3775903 | None:intergenic | 25.0% |
| !! | CTCCATTTCTAATTTTTGTT+TGG | - | chr8.2:3775248-3775267 | None:intergenic | 25.0% |
| !! | TAAGTGAATCCAACTTTTAT+TGG | + | chr8.2:3774273-3774292 | MS.gene042282:intron | 25.0% |
| !! | TAGAAAAGCATAAATGATCA+AGG | + | chr8.2:3774509-3774528 | MS.gene042282:intron | 25.0% |
| !! | TCACAATAATCAAAAGCTTT+TGG | - | chr8.2:3774337-3774356 | None:intergenic | 25.0% |
| !! | TTTCTATTTTCTCTTTCAGA+TGG | - | chr8.2:3773545-3773564 | None:intergenic | 25.0% |
| !!! | TTTCCTTCATTTTTTGTGTT+TGG | - | chr8.2:3774453-3774472 | None:intergenic | 25.0% |
| !!! | TTTTGCCTTATTGTATGTAA+AGG | + | chr8.2:3773729-3773748 | MS.gene042282:intron | 25.0% |
| AATATTGGGACGAAAAGAAT+GGG | + | chr8.2:3775796-3775815 | MS.gene042282:CDS | 30.0% | |
| ACGAAATTTCGACATAAATG+AGG | - | chr8.2:3774428-3774447 | None:intergenic | 30.0% | |
| ATACTCTGACAAACCTTATA+AGG | + | chr8.2:3772878-3772897 | MS.gene042282:CDS | 30.0% | |
| ATGAAGGAAAGGAAAGTAAA+AGG | + | chr8.2:3774463-3774482 | MS.gene042282:intron | 30.0% | |
| ATTAGACAGAGAAAAATGAG+GGG | - | chr8.2:3775726-3775745 | None:intergenic | 30.0% | |
| CAAACCTTATAAGGAGTTAA+AGG | + | chr8.2:3772887-3772906 | MS.gene042282:CDS | 30.0% | |
| CGTGAAGATGATTATAATTG+TGG | + | chr8.2:3773452-3773471 | MS.gene042282:CDS | 30.0% | |
| CTTAAACAAGATCCTTCAAT+TGG | + | chr8.2:3775207-3775226 | MS.gene042282:CDS | 30.0% | |
| GAAGATGATTATAATTGTGG+AGG | + | chr8.2:3773455-3773474 | MS.gene042282:CDS | 30.0% | |
| GAGTAGAAAAAAACTTGCAT+AGG | + | chr8.2:3773813-3773832 | MS.gene042282:intron | 30.0% | |
| TAATATTGGGACGAAAAGAA+TGG | + | chr8.2:3775795-3775814 | MS.gene042282:CDS | 30.0% | |
| TACTGAATTGGAAGAAAGTT+TGG | + | chr8.2:3775357-3775376 | MS.gene042282:CDS | 30.0% | |
| TATATAAAATAAGATGGGGC+AGG | + | chr8.2:3774554-3774573 | MS.gene042282:intron | 30.0% | |
| TGCAGTATAAGTATAATGAG+AGG | + | chr8.2:3773618-3773637 | MS.gene042282:CDS | 30.0% | |
| TGGGATGAAAAAAAACACAT+CGG | - | chr8.2:3774842-3774861 | None:intergenic | 30.0% | |
| TTGCAAGTTATGAAACATCT+TGG | + | chr8.2:3775289-3775308 | MS.gene042282:CDS | 30.0% | |
| ! | ACTTATACTGCATTTTGTAG+AGG | - | chr8.2:3773610-3773629 | None:intergenic | 30.0% |
| ! | CAATTGAAGGATCTTGTTTA+AGG | - | chr8.2:3775209-3775228 | None:intergenic | 30.0% |
| ! | TAATGTCAATTTCATTGGCT+AGG | - | chr8.2:3773577-3773596 | None:intergenic | 30.0% |
| ! | TATGCTTTTCTACTTTGCTA+AGG | - | chr8.2:3774501-3774520 | None:intergenic | 30.0% |
| !! | AATCTATGCAACTTGTTAGT+TGG | - | chr8.2:3775586-3775605 | None:intergenic | 30.0% |
| !! | AGAAGAAATGAGTACTGAAT+TGG | + | chr8.2:3775345-3775364 | MS.gene042282:CDS | 30.0% |
| !! | CCTTTGAAACTAAACATCAT+GGG | + | chr8.2:3773369-3773388 | MS.gene042282:CDS | 30.0% |
| !! | CTAATCTTTTAGAAGGACAA+TGG | - | chr8.2:3774162-3774181 | None:intergenic | 30.0% |
| !! | TCCTTTGAAACTAAACATCA+TGG | + | chr8.2:3773368-3773387 | MS.gene042282:CDS | 30.0% |
| !!! | TCTTTTTTCCAGCACAATAT+GGG | - | chr8.2:3772956-3772975 | None:intergenic | 30.0% |
| !!! | TTCTTTTTTCCAGCACAATA+TGG | - | chr8.2:3772957-3772976 | None:intergenic | 30.0% |
| AAACAGAAACGCCAAACAAA+AGG | + | chr8.2:3773037-3773056 | MS.gene042282:CDS | 35.0% | |
| AACTAAACATCATGGGAAGA+AGG | + | chr8.2:3773376-3773395 | MS.gene042282:CDS | 35.0% | |
| AAGAATACATGGACATCCAA+TGG | - | chr8.2:3773269-3773288 | None:intergenic | 35.0% | |
| AAGAGCAACCTTAATGATTC+TGG | + | chr8.2:3773212-3773231 | MS.gene042282:CDS | 35.0% | |
| ACCTTAATGATTCTGGATAC+TGG | + | chr8.2:3773219-3773238 | MS.gene042282:CDS | 35.0% | |
| AGCAAGTAGAGATTAGAAAG+TGG | - | chr8.2:3774862-3774881 | None:intergenic | 35.0% | |
| ATGGAGATTGAGGAACTAAA+AGG | + | chr8.2:3775262-3775281 | MS.gene042282:CDS | 35.0% | |
| ATTTGAGCTATGGAACTTCA+AGG | + | chr8.2:3775846-3775865 | MS.gene042282:CDS | 35.0% | |
| ATTTGCAAAGTACAGACCAT+TGG | + | chr8.2:3773250-3773269 | MS.gene042282:CDS | 35.0% | |
| CACAGCCTTTACATACAATA+AGG | - | chr8.2:3773737-3773756 | None:intergenic | 35.0% | |
| CAGTTCAGACATTTATGGAT+GGG | + | chr8.2:3773424-3773443 | MS.gene042282:CDS | 35.0% | |
| CCATCCTTTAACTCCTTATA+AGG | - | chr8.2:3772894-3772913 | None:intergenic | 35.0% | |
| CCTTATAAGGAGTTAAAGGA+TGG | + | chr8.2:3772891-3772910 | MS.gene042282:CDS | 35.0% | |
| GAAGAAGGAATGGAATTCAA+TGG | + | chr8.2:3773391-3773410 | MS.gene042282:CDS | 35.0% | |
| GAATCAAATCCTCATTGACA+AGG | + | chr8.2:3775396-3775415 | MS.gene042282:CDS | 35.0% | |
| GATCATCTCTACCTTTCTTT+AGG | + | chr8.2:3775639-3775658 | MS.gene042282:intron | 35.0% | |
| GCAAGTAGAGATTAGAAAGT+GGG | - | chr8.2:3774861-3774880 | None:intergenic | 35.0% | |
| GGAAAAGTTGCGTAATGAAT+TGG | + | chr8.2:3773954-3773973 | MS.gene042282:CDS | 35.0% | |
| GGGATGAAAAAAAACACATC+GGG | - | chr8.2:3774841-3774860 | None:intergenic | 35.0% | |
| GGGTTAAATGAAATGCTGAA+GGG | + | chr8.2:3775760-3775779 | MS.gene042282:CDS | 35.0% | |
| GTTCTGCTGTGAATATATTG+TGG | + | chr8.2:3775685-3775704 | MS.gene042282:intron | 35.0% | |
| TAGTAGACTTCATCAATGAC+TGG | + | chr8.2:3773312-3773331 | MS.gene042282:CDS | 35.0% | |
| TGAATTGGAAGAAAGTTTGG+AGG | + | chr8.2:3775360-3775379 | MS.gene042282:CDS | 35.0% | |
| TGGAGATTGAGGAACTAAAA+GGG | + | chr8.2:3775263-3775282 | MS.gene042282:CDS | 35.0% | |
| TTAACAATTATGCCTGTCCA+TGG | - | chr8.2:3773188-3773207 | None:intergenic | 35.0% | |
| TTAGACAGAGAAAAATGAGG+GGG | - | chr8.2:3775725-3775744 | None:intergenic | 35.0% | |
| TTCACTTAAAGGGAGTCAAT+AGG | - | chr8.2:3774261-3774280 | None:intergenic | 35.0% | |
| TTTGGTCTGCTTCATTTACT+AGG | - | chr8.2:3773100-3773119 | None:intergenic | 35.0% | |
| ! | CCCATGATGTTTAGTTTCAA+AGG | - | chr8.2:3773372-3773391 | None:intergenic | 35.0% |
| ! | CTTCACAATGCTTTTGTTGA+AGG | + | chr8.2:3773680-3773699 | MS.gene042282:CDS | 35.0% |
| ! | GACAGGTCTAATCTTTTAGA+AGG | - | chr8.2:3774169-3774188 | None:intergenic | 35.0% |
| ! | TATTAGAGTCAAGGAGTATG+CGG | + | chr8.2:3773890-3773909 | MS.gene042282:intron | 35.0% |
| ! | TCTTTTTCTCTCTGGTAGTT+TGG | - | chr8.2:3775181-3775200 | None:intergenic | 35.0% |
| !!! | CTAGTTGCTTTTCCAATTGA+AGG | - | chr8.2:3775222-3775241 | None:intergenic | 35.0% |
| !!! | CTGATGATTTTAAAGTCTCG+AGG | - | chr8.2:3774892-3774911 | None:intergenic | 35.0% |
| AAAAACACATCGGGCATTTG+TGG | - | chr8.2:3774832-3774851 | None:intergenic | 40.0% | |
| AACATCATGGGAAGAAGGAA+TGG | + | chr8.2:3773381-3773400 | MS.gene042282:CDS | 40.0% | |
| AAGATGGGGCAGGATTTAAT+TGG | + | chr8.2:3774564-3774583 | MS.gene042282:intron | 40.0% | |
| AGAATTTAAACGGCACACTC+AGG | + | chr8.2:3772928-3772947 | MS.gene042282:CDS | 40.0% | |
| AGAGGATCATGTCCATAAGT+AGG | + | chr8.2:3773636-3773655 | MS.gene042282:CDS | 40.0% | |
| AGGAAGGCTGAGAACAATTT+CGG | + | chr8.2:3773505-3773524 | MS.gene042282:CDS | 40.0% | |
| ATGGAATTCAATGGACATGC+AGG | + | chr8.2:3773400-3773419 | MS.gene042282:CDS | 40.0% | |
| ATTAGACCTGTCTTTGTCGA+TGG | + | chr8.2:3774177-3774196 | MS.gene042282:intron | 40.0% | |
| ATTCCTCGAGTCTTTCTAGA+AGG | - | chr8.2:3774958-3774977 | None:intergenic | 40.0% | |
| CACCATCCATGAAGAATACA+TGG | - | chr8.2:3773280-3773299 | None:intergenic | 40.0% | |
| CAGACATAATTCTCAACCTG+CGG | - | chr8.2:3773164-3773183 | None:intergenic | 40.0% | |
| CAGAGATCTAAATAAGCGTG+AGG | + | chr8.2:3774008-3774027 | MS.gene042282:CDS | 40.0% | |
| CAGGCTTATTGAAGAGCAAA+AGG | + | chr8.2:3775031-3775050 | MS.gene042282:CDS | 40.0% | |
| CCAGTTCAGACATTTATGGA+TGG | + | chr8.2:3773423-3773442 | MS.gene042282:CDS | 40.0% | |
| CCATCCATAAATGTCTGAAC+TGG | - | chr8.2:3773426-3773445 | None:intergenic | 40.0% | |
| CTACCAGAGAGAAAAAGAAG+AGG | + | chr8.2:3775183-3775202 | MS.gene042282:intron | 40.0% | |
| CTTATTTAGATCTCTGCTCC+AGG | - | chr8.2:3774004-3774023 | None:intergenic | 40.0% | |
| CTTGTAGTTCATCATTGCTC+TGG | - | chr8.2:3775426-3775445 | None:intergenic | 40.0% | |
| GACTTCATCAATGACTGGAA+TGG | + | chr8.2:3773317-3773336 | MS.gene042282:CDS | 40.0% | |
| GATTTGATGCAACATGCAAC+CGG | + | chr8.2:3772996-3773015 | MS.gene042282:CDS | 40.0% | |
| GCCAGTATCCAGAATCATTA+AGG | - | chr8.2:3773223-3773242 | None:intergenic | 40.0% | |
| GGATGTCCATGTATTCTTCA+TGG | + | chr8.2:3773271-3773290 | MS.gene042282:CDS | 40.0% | |
| GGGGTTAAATGAAATGCTGA+AGG | + | chr8.2:3775759-3775778 | MS.gene042282:intron | 40.0% | |
| GGTAGAAGGCCAATAAAAGT+TGG | - | chr8.2:3774285-3774304 | None:intergenic | 40.0% | |
| GGTATGCTGAATTTGAGCTA+TGG | + | chr8.2:3775836-3775855 | MS.gene042282:CDS | 40.0% | |
| GTCCATGTATTCTTCATGGA+TGG | + | chr8.2:3773275-3773294 | MS.gene042282:CDS | 40.0% | |
| GTCTGCTTCATTTACTAGGT+CGG | - | chr8.2:3773096-3773115 | None:intergenic | 40.0% | |
| TAGCTGATGAGAATGTCTTC+AGG | + | chr8.2:3775012-3775031 | MS.gene042282:CDS | 40.0% | |
| TATAATTGTGGAGGGCCAAT+CGG | + | chr8.2:3773464-3773483 | MS.gene042282:CDS | 40.0% | |
| TATGGAACTTCAAGGAACAG+AGG | + | chr8.2:3775854-3775873 | MS.gene042282:CDS | 40.0% | |
| TCCAATTAGCAGATGGTAGA+AGG | - | chr8.2:3774299-3774318 | None:intergenic | 40.0% | |
| TTGAGAATTATGTCTGGCCA+TGG | + | chr8.2:3773168-3773187 | MS.gene042282:CDS | 40.0% | |
| ! | GAGGAATGTGTTACTCTTGT+TGG | + | chr8.2:3774971-3774990 | MS.gene042282:CDS | 40.0% |
| ! | GCTTTTGGCATATAGACTCT+CGG | - | chr8.2:3774322-3774341 | None:intergenic | 40.0% |
| ! | TATCAGTGAGTCTGAGATTG+AGG | + | chr8.2:3772854-3772873 | MS.gene042282:CDS | 40.0% |
| ! | TGATTCTGGATACTGGCTAA+AGG | + | chr8.2:3773226-3773245 | MS.gene042282:CDS | 40.0% |
| !! | GTTACTCTTGTTGGCTTCAA+AGG | + | chr8.2:3774980-3774999 | MS.gene042282:CDS | 40.0% |
| !!! | CGGGCATTTGTGGTTTTTTA+TGG | - | chr8.2:3774822-3774841 | None:intergenic | 40.0% |
| AAATGCGGAAGCTTGATACC+TGG | + | chr8.2:3773983-3774002 | MS.gene042282:CDS | 45.0% | |
| AAGCAACTTAAGCGCAAGAG+AGG | + | chr8.2:3775922-3775941 | MS.gene042282:CDS | 45.0% | |
| AAGGCTGTGTGCTTCATGTT+TGG | + | chr8.2:3773748-3773767 | MS.gene042282:intron | 45.0% | |
| AATTATGTCTGGCCATGGAC+AGG | + | chr8.2:3773173-3773192 | MS.gene042282:CDS | 45.0% | |
| ACTGGAAGAGGACAAGAAGA+AGG | + | chr8.2:3774056-3774075 | MS.gene042282:CDS | 45.0% | |
| AGGATACCATCGACAAAGAC+AGG | - | chr8.2:3774186-3774205 | None:intergenic | 45.0% | |
| AGGCAAATCAAGAGCAACCA+AGG | - | chr8.2:3774217-3774236 | None:intergenic | 45.0% | |
| AGGTACTAACCGATCAAGAG+AGG | + | chr8.2:3774028-3774047 | MS.gene042282:CDS | 45.0% | |
| AGTACCTTCGGAACAAAGGA+AGG | + | chr8.2:3773489-3773508 | MS.gene042282:CDS | 45.0% | |
| ATAATTGTGGAGGGCCAATC+GGG | + | chr8.2:3773465-3773484 | MS.gene042282:CDS | 45.0% | |
| ATGGGAGACCTTAATGCTGA+AGG | + | chr8.2:3775814-3775833 | MS.gene042282:CDS | 45.0% | |
| CAGCATACCCTTCAGCATTA+AGG | - | chr8.2:3775825-3775844 | None:intergenic | 45.0% | |
| CAGGCCAGTTCAGACATTTA+TGG | + | chr8.2:3773419-3773438 | MS.gene042282:CDS | 45.0% | |
| CAGTTTCTGCCTCTCTTGAT+CGG | - | chr8.2:3774040-3774059 | None:intergenic | 45.0% | |
| CATGTCCATAAGTAGGATGC+TGG | + | chr8.2:3773643-3773662 | MS.gene042282:CDS | 45.0% | |
| GAACTTCAAGGAACAGAGGA+AGG | + | chr8.2:3775858-3775877 | MS.gene042282:CDS | 45.0% | |
| GCCTTCTACCATCTGCTAAT+TGG | + | chr8.2:3774295-3774314 | MS.gene042282:intron | 45.0% | |
| TAATTCTCAACCTGCGGTAC+AGG | - | chr8.2:3773158-3773177 | None:intergenic | 45.0% | |
| TCAAGAGCAACCAAGGACAT+TGG | - | chr8.2:3774210-3774229 | None:intergenic | 45.0% | |
| TCAGCAGAAGACATTCGCAA+TGG | - | chr8.2:3775149-3775168 | None:intergenic | 45.0% | |
| TGCTGAACCTTTGCTTACTC+CGG | - | chr8.2:3773018-3773037 | None:intergenic | 45.0% | |
| TGGGAGACCTTAATGCTGAA+GGG | + | chr8.2:3775815-3775834 | MS.gene042282:CDS | 45.0% | |
| TGGTATCCTACCAATGTCCT+TGG | + | chr8.2:3774197-3774216 | MS.gene042282:intron | 45.0% | |
| ! | AGGCCTCTTCTTTTTCTCTC+TGG | - | chr8.2:3775189-3775208 | None:intergenic | 45.0% |
| ! | CGCAGGTTGAGAATTATGTC+TGG | + | chr8.2:3773162-3773181 | MS.gene042282:CDS | 45.0% |
| ! | GCGAATGTCTTCTGCTGATT+TGG | + | chr8.2:3775151-3775170 | MS.gene042282:intron | 45.0% |
| ! | TGTCCTTCTAGAAAGACTCG+AGG | + | chr8.2:3774952-3774971 | MS.gene042282:intron | 45.0% |
| !! | GAGGTGGTTTGCCTTTTGTT+TGG | - | chr8.2:3773051-3773070 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTATACAAATATA+TGG | + | chr8.2:3774387-3774406 | MS.gene042282:intron | 5.0% |
| AAAACTTTGCCAGAGCGAGG+TGG | - | chr8.2:3773067-3773086 | None:intergenic | 50.0% | |
| AGAGAGGCAGAAACTGGAAG+AGG | + | chr8.2:3774044-3774063 | MS.gene042282:CDS | 50.0% | |
| CATGCAACCGGAGTAAGCAA+AGG | + | chr8.2:3773008-3773027 | MS.gene042282:CDS | 50.0% | |
| CCAAAAACTTTGCCAGAGCG+AGG | - | chr8.2:3773070-3773089 | None:intergenic | 50.0% | |
| CGATCAAGAGAGGCAGAAAC+TGG | + | chr8.2:3774038-3774057 | MS.gene042282:CDS | 50.0% | |
| CTCCTCCAGCATCCTACTTA+TGG | - | chr8.2:3773651-3773670 | None:intergenic | 50.0% | |
| CTCTCGGTCCAATTAGCAGA+TGG | - | chr8.2:3774306-3774325 | None:intergenic | 50.0% | |
| CTTCATGGATGGTGACACTC+AGG | + | chr8.2:3773286-3773305 | MS.gene042282:CDS | 50.0% | |
| GAGCAACCAAGGACATTGGT+AGG | - | chr8.2:3774206-3774225 | None:intergenic | 50.0% | |
| GCGAAGGATCTTGGAAGAAC+AGG | + | chr8.2:3773933-3773952 | MS.gene042282:CDS | 50.0% | |
| GGTAGAGATGATCTTCACGC+AGG | - | chr8.2:3775632-3775651 | None:intergenic | 50.0% | |
| GTCCATAAGTAGGATGCTGG+AGG | + | chr8.2:3773646-3773665 | MS.gene042282:CDS | 50.0% | |
| TAATTGTGGAGGGCCAATCG+GGG | + | chr8.2:3773466-3773485 | MS.gene042282:CDS | 50.0% | |
| TCAGCCTTCCTTTGTTCCGA+AGG | - | chr8.2:3773496-3773515 | None:intergenic | 50.0% | |
| TTGACAGCTTCGACCAAAGC+CGG | - | chr8.2:3773131-3773150 | None:intergenic | 50.0% | |
| ! | CCTCGCTCTGGCAAAGTTTT+TGG | + | chr8.2:3773067-3773086 | MS.gene042282:CDS | 50.0% |
| AAAGGCAAACCACCTCGCTC+TGG | + | chr8.2:3773055-3773074 | MS.gene042282:CDS | 55.0% | |
| AGATCCTTCGCACCTCCTCA+TGG | - | chr8.2:3773924-3773943 | None:intergenic | 55.0% | |
| AGCAGACCAAATACCTCCCC+CGG | + | chr8.2:3773109-3773128 | MS.gene042282:CDS | 55.0% | |
| CTCAGGTGCCCATATTGTGC+TGG | + | chr8.2:3772945-3772964 | MS.gene042282:CDS | 55.0% | |
| GATCCTTCGCACCTCCTCAT+GGG | - | chr8.2:3773923-3773942 | None:intergenic | 55.0% | |
| GGATGCTGGAGGAGAAAGAC+AGG | + | chr8.2:3773657-3773676 | MS.gene042282:CDS | 55.0% | |
| TATGCGGCGTAAAGCCCATG+AGG | + | chr8.2:3773906-3773925 | MS.gene042282:CDS | 55.0% | |
| TCTCAACCTGCGGTACAGGT+TGG | - | chr8.2:3773154-3773173 | None:intergenic | 55.0% | |
| TCTGGCGCTCCTTGTCAATG+AGG | - | chr8.2:3775408-3775427 | None:intergenic | 55.0% | |
| TGACAGCTTCGACCAAAGCC+GGG | - | chr8.2:3773130-3773149 | None:intergenic | 55.0% | |
| TGTCAACCAACCTGTACCGC+AGG | + | chr8.2:3773145-3773164 | MS.gene042282:CDS | 55.0% | |
| ! | TGAGGAGGTGCGAAGGATCT+TGG | + | chr8.2:3773924-3773943 | MS.gene042282:CDS | 55.0% |
| !! | GGGGAGTACCTTCGGAACAA+AGG | + | chr8.2:3773485-3773504 | MS.gene042282:CDS | 55.0% |
| !! | TTCCGAAGGTACTCCCCGAT+TGG | - | chr8.2:3773482-3773501 | None:intergenic | 55.0% |
| ACAGCTTCGACCAAAGCCGG+GGG | - | chr8.2:3773128-3773147 | None:intergenic | 60.0% | |
| CCAAATACCTCCCCCGGCTT+TGG | + | chr8.2:3773115-3773134 | MS.gene042282:CDS | 60.0% | |
| GACAGCTTCGACCAAAGCCG+GGG | - | chr8.2:3773129-3773148 | None:intergenic | 60.0% | |
| ! | AAGCCCATGAGGAGGTGCGA+AGG | + | chr8.2:3773917-3773936 | MS.gene042282:CDS | 60.0% |
| !! | CCAAAGCCGGGGGAGGTATT+TGG | - | chr8.2:3773118-3773137 | None:intergenic | 60.0% |
| !! | GGCCAATCGGGGAGTACCTT+CGG | + | chr8.2:3773477-3773496 | MS.gene042282:CDS | 60.0% |
| GCGGCGTAAAGCCCATGAGG+AGG | + | chr8.2:3773909-3773928 | MS.gene042282:CDS | 65.0% | |
| GCTTCGACCAAAGCCGGGGG+AGG | - | chr8.2:3773125-3773144 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 3772825 | 3775948 | 3772825 | ID=MS.gene042282 |
| chr8.2 | mRNA | 3772825 | 3775948 | 3772825 | ID=MS.gene042282.t1;Parent=MS.gene042282 |
| chr8.2 | exon | 3772825 | 3773701 | 3772825 | ID=MS.gene042282.t1.exon1;Parent=MS.gene042282.t1 |
| chr8.2 | CDS | 3772825 | 3773701 | 3772825 | ID=cds.MS.gene042282.t1;Parent=MS.gene042282.t1 |
| chr8.2 | exon | 3773896 | 3774077 | 3773896 | ID=MS.gene042282.t1.exon2;Parent=MS.gene042282.t1 |
| chr8.2 | CDS | 3773896 | 3774077 | 3773896 | ID=cds.MS.gene042282.t1;Parent=MS.gene042282.t1 |
| chr8.2 | exon | 3774963 | 3775052 | 3774963 | ID=MS.gene042282.t1.exon3;Parent=MS.gene042282.t1 |
| chr8.2 | CDS | 3774963 | 3775052 | 3774963 | ID=cds.MS.gene042282.t1;Parent=MS.gene042282.t1 |
| chr8.2 | exon | 3775190 | 3775468 | 3775190 | ID=MS.gene042282.t1.exon4;Parent=MS.gene042282.t1 |
| chr8.2 | CDS | 3775190 | 3775468 | 3775190 | ID=cds.MS.gene042282.t1;Parent=MS.gene042282.t1 |
| chr8.2 | exon | 3775760 | 3775948 | 3775760 | ID=MS.gene042282.t1.exon5;Parent=MS.gene042282.t1 |
| chr8.2 | CDS | 3775760 | 3775948 | 3775760 | ID=cds.MS.gene042282.t1;Parent=MS.gene042282.t1 |
| Gene Sequence |
| Protein sequence |
