Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035571.t1 | RHN64611.1 | 67.4 | 629 | 106 | 3 | 1 | 530 | 1 | 629 | 2.70E-194 | 688.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035571.t1 | Q9S9P3 | 40.7 | 631 | 267 | 10 | 5 | 529 | 4 | 633 | 4.5e-97 | 356.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035571.t1 | A0A396IIA7 | 67.4 | 629 | 106 | 3 | 1 | 530 | 1 | 629 | 2.0e-194 | 688.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene035571 | MS.gene73119 | PPI |
| MS.gene012589 | MS.gene035571 | PPI |
| MS.gene035571 | MS.gene86666 | PPI |
| MS.gene035571 | MS.gene012586 | PPI |
| MS.gene042282 | MS.gene035571 | PPI |
| MS.gene005189 | MS.gene035571 | PPI |
| MS.gene035570 | MS.gene035571 | PPI |
| MS.gene035571 | MS.gene000608 | PPI |
| MS.gene035571 | MS.gene042280 | PPI |
| MS.gene053226 | MS.gene035571 | PPI |
| MS.gene064542 | MS.gene035571 | PPI |
| MS.gene035571 | MS.gene52620 | PPI |
| MS.gene035571 | MS.gene035629 | PPI |
| MS.gene62095 | MS.gene035571 | PPI |
| MS.gene012490 | MS.gene035571 | PPI |
| MS.gene001928 | MS.gene035571 | PPI |
| MS.gene88066 | MS.gene035571 | PPI |
| MS.gene034251 | MS.gene035571 | PPI |
| MS.gene035571 | MS.gene91547 | PPI |
| MS.gene035571 | MS.gene044806 | PPI |
| MS.gene44056 | MS.gene035571 | PPI |
| MS.gene40741 | MS.gene035571 | PPI |
| MS.gene035805 | MS.gene035571 | PPI |
| MS.gene042281 | MS.gene035571 | PPI |
| MS.gene012587 | MS.gene035571 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035571.t1 | MTR_4g131350 | 87.572 | 523 | 54 | 2 | 1 | 512 | 54 | 576 | 0.0 | 867 |
| MS.gene035571.t1 | MTR_4g125920 | 85.821 | 536 | 63 | 3 | 1 | 523 | 1 | 536 | 0.0 | 865 |
| MS.gene035571.t1 | MTR_4g125920 | 94.595 | 37 | 2 | 0 | 494 | 530 | 593 | 629 | 1.37e-14 | 77.0 |
| MS.gene035571.t1 | MTR_4g006760 | 78.807 | 486 | 89 | 5 | 22 | 496 | 22 | 504 | 0.0 | 733 |
| MS.gene035571.t1 | MTR_4g131310 | 71.698 | 530 | 69 | 7 | 1 | 522 | 1 | 457 | 0.0 | 661 |
| MS.gene035571.t1 | MTR_3g067815 | 40.000 | 525 | 282 | 10 | 1 | 497 | 1 | 520 | 1.01e-115 | 356 |
| MS.gene035571.t1 | MTR_5g079940 | 38.246 | 536 | 283 | 14 | 4 | 497 | 471 | 1000 | 6.56e-94 | 310 |
| MS.gene035571.t1 | MTR_5g079940 | 33.562 | 146 | 84 | 5 | 1 | 144 | 1 | 135 | 1.66e-15 | 80.5 |
| MS.gene035571.t1 | MTR_5g079940 | 39.423 | 104 | 53 | 4 | 1 | 103 | 117 | 211 | 1.97e-14 | 77.0 |
| MS.gene035571.t1 | MTR_5g079940 | 38.372 | 86 | 48 | 2 | 19 | 103 | 247 | 328 | 2.95e-13 | 73.2 |
| MS.gene035571.t1 | MTR_5g079940 | 36.634 | 101 | 60 | 3 | 5 | 101 | 353 | 453 | 5.78e-11 | 65.9 |
| MS.gene035571.t1 | MTR_2g097020 | 31.444 | 547 | 289 | 16 | 13 | 497 | 10 | 532 | 8.27e-57 | 201 |
| MS.gene035571.t1 | MTR_4g046643 | 31.395 | 516 | 294 | 16 | 33 | 497 | 32 | 538 | 3.81e-54 | 194 |
| MS.gene035571.t1 | MTR_2g095400 | 33.652 | 523 | 294 | 18 | 13 | 497 | 10 | 517 | 2.50e-53 | 191 |
| MS.gene035571.t1 | MTR_2g097010 | 32.270 | 533 | 288 | 15 | 26 | 497 | 23 | 543 | 1.54e-50 | 184 |
| MS.gene035571.t1 | MTR_4g126200 | 41.463 | 123 | 61 | 3 | 375 | 497 | 3 | 114 | 2.42e-15 | 76.6 |
| MS.gene035571.t1 | MTR_2g097000 | 43.836 | 146 | 75 | 4 | 355 | 497 | 113 | 254 | 1.13e-13 | 73.2 |
| MS.gene035571.t1 | MTR_3g067845 | 39.370 | 127 | 71 | 2 | 372 | 495 | 6 | 129 | 7.48e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035571.t1 | AT1G15910 | 51.703 | 499 | 217 | 8 | 18 | 495 | 17 | 512 | 5.30e-164 | 480 |
| MS.gene035571.t1 | AT4G00380 | 51.102 | 499 | 219 | 7 | 19 | 495 | 18 | 513 | 1.63e-160 | 471 |
| MS.gene035571.t1 | AT4G00380 | 51.102 | 499 | 219 | 7 | 19 | 495 | 18 | 513 | 1.63e-160 | 471 |
| MS.gene035571.t1 | AT4G00380 | 47.379 | 496 | 214 | 8 | 19 | 495 | 18 | 485 | 2.99e-142 | 423 |
| MS.gene035571.t1 | AT1G80790 | 48.682 | 493 | 227 | 9 | 19 | 490 | 19 | 506 | 7.13e-140 | 418 |
| MS.gene035571.t1 | AT1G80790 | 48.682 | 493 | 227 | 9 | 19 | 490 | 19 | 506 | 7.13e-140 | 418 |
| MS.gene035571.t1 | AT1G80790 | 48.463 | 423 | 197 | 7 | 19 | 423 | 19 | 438 | 2.11e-130 | 388 |
| MS.gene035571.t1 | AT3G48670 | 37.109 | 512 | 283 | 10 | 16 | 497 | 21 | 523 | 8.43e-95 | 302 |
| MS.gene035571.t1 | AT3G48670 | 37.109 | 512 | 283 | 10 | 16 | 497 | 21 | 523 | 8.43e-95 | 302 |
| MS.gene035571.t1 | AT3G48670 | 37.109 | 512 | 283 | 10 | 16 | 497 | 21 | 523 | 8.43e-95 | 302 |
| MS.gene035571.t1 | AT3G12550 | 32.630 | 521 | 299 | 13 | 16 | 495 | 5 | 514 | 1.51e-70 | 236 |
| MS.gene035571.t1 | AT3G12550 | 33.138 | 513 | 291 | 13 | 24 | 495 | 13 | 514 | 6.00e-70 | 236 |
| MS.gene035571.t1 | AT3G12550 | 33.138 | 513 | 291 | 13 | 24 | 495 | 13 | 514 | 6.00e-70 | 236 |
| MS.gene035571.t1 | AT3G12550 | 33.138 | 513 | 291 | 13 | 24 | 495 | 13 | 514 | 6.00e-70 | 236 |
| MS.gene035571.t1 | AT3G12550 | 33.138 | 513 | 291 | 13 | 24 | 495 | 13 | 514 | 6.19e-70 | 236 |
| MS.gene035571.t1 | AT1G13790 | 33.167 | 401 | 230 | 8 | 118 | 491 | 219 | 608 | 1.63e-48 | 179 |
| MS.gene035571.t1 | AT1G13790 | 36.364 | 77 | 49 | 0 | 12 | 88 | 3 | 79 | 3.30e-12 | 69.7 |
| MS.gene035571.t1 | AT1G13790 | 33.167 | 401 | 230 | 8 | 118 | 491 | 219 | 608 | 1.63e-48 | 179 |
| MS.gene035571.t1 | AT1G13790 | 36.364 | 77 | 49 | 0 | 12 | 88 | 3 | 79 | 3.30e-12 | 69.7 |
| MS.gene035571.t1 | AT5G59390 | 31.325 | 415 | 237 | 11 | 112 | 495 | 28 | 425 | 1.64e-44 | 165 |
| MS.gene035571.t1 | AT5G59390 | 31.325 | 415 | 237 | 11 | 112 | 495 | 28 | 425 | 1.64e-44 | 165 |
| MS.gene035571.t1 | AT5G59390 | 31.325 | 415 | 237 | 11 | 112 | 495 | 28 | 425 | 1.64e-44 | 165 |
| MS.gene035571.t1 | AT4G01180 | 31.785 | 409 | 236 | 11 | 114 | 495 | 28 | 420 | 4.64e-43 | 161 |
| MS.gene035571.t1 | AT5G59390 | 30.952 | 420 | 237 | 12 | 112 | 495 | 28 | 430 | 1.71e-42 | 160 |
| MS.gene035571.t1 | AT5G59390 | 30.952 | 420 | 237 | 12 | 112 | 495 | 28 | 430 | 1.71e-42 | 160 |
| MS.gene035571.t1 | AT4G01780 | 28.371 | 356 | 161 | 9 | 123 | 475 | 79 | 343 | 1.53e-27 | 115 |
| MS.gene035571.t1 | AT2G16490 | 34.416 | 154 | 71 | 5 | 400 | 529 | 1 | 148 | 1.91e-14 | 72.0 |
Find 124 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTGAAGGATCTTGTTTA+AGG | 0.184121 | 8.4:-2106263 | None:intergenic |
| GGTAATAATAAAACTAATAT+TGG | 0.209949 | 8.4:+2106800 | MS.gene035571:CDS |
| CCATCCTTTAACTCCTTATA+AGG | 0.231876 | 8.4:-2103949 | None:intergenic |
| AAGAGCAACCTTAATGATTC+TGG | 0.249360 | 8.4:+2104270 | MS.gene035571:CDS |
| GAAGAAAGAGTTCAAATATA+AGG | 0.256178 | 8.4:+2104032 | MS.gene035571:CDS |
| CAAACCTTATAAGGAGTTAA+AGG | 0.267169 | 8.4:+2103945 | MS.gene035571:CDS |
| GCCAGTATCCAGAATCATTA+AGG | 0.269275 | 8.4:-2104278 | None:intergenic |
| ATGGAGATTGAGGAACTAAA+AGG | 0.270338 | 8.4:+2106319 | MS.gene035571:CDS |
| CTCCTCCAGCATCCTACTTA+TGG | 0.276527 | 8.4:-2104706 | None:intergenic |
| TACTGAATTGGAAGAAAGTT+TGG | 0.280963 | 8.4:+2106414 | MS.gene035571:CDS |
| CAGGCCAGTTCAGACATTTA+TGG | 0.299736 | 8.4:+2104477 | MS.gene035571:CDS |
| ATACTCTGACAAACCTTATA+AGG | 0.314776 | 8.4:+2103936 | MS.gene035571:CDS |
| CAGCATACCCTTCAGCATTA+AGG | 0.320481 | 8.4:-2106841 | None:intergenic |
| GGAAGAAATGAGTACTGAAT+TGG | 0.340118 | 8.4:+2106402 | MS.gene035571:CDS |
| ATTTGTAATGTCAATTTCAT+TGG | 0.353548 | 8.4:-2104637 | None:intergenic |
| GGAAAAGTTGCGTAATGAAT+TGG | 0.355859 | 8.4:+2105012 | MS.gene035571:CDS |
| TTTGGTCTGCTTCATTTACT+AGG | 0.363332 | 8.4:-2104155 | None:intergenic |
| AGGAAGGCTGAGAACAATTT+CGG | 0.365624 | 8.4:+2104563 | MS.gene035571:CDS |
| CGATCAAGAGAGGCAGAAAC+TGG | 0.373050 | 8.4:+2105096 | MS.gene035571:CDS |
| TGAGGAGGTGCGAAGGATCT+TGG | 0.385235 | 8.4:+2104982 | MS.gene035571:CDS |
| ACCTTAATGATTCTGGATAC+TGG | 0.387551 | 8.4:+2104277 | MS.gene035571:CDS |
| TTGCAAGTTATGAAACATCT+TGG | 0.395938 | 8.4:+2106346 | MS.gene035571:CDS |
| GGCCAATCGGGGAGTACCTT+CGG | 0.401670 | 8.4:+2104535 | MS.gene035571:CDS |
| CTTAAACAAGATCCTTCAAT+TGG | 0.401905 | 8.4:+2106264 | MS.gene035571:CDS |
| CTTGTAGTTCATCATTGCTC+TGG | 0.417100 | 8.4:-2106480 | None:intergenic |
| GGATGTCCATGTATTCTTCA+TGG | 0.417376 | 8.4:+2104329 | MS.gene035571:CDS |
| GAGGAATGAGTTACTCTTGT+TGG | 0.420705 | 8.4:+2106029 | MS.gene035571:CDS |
| CAGGCTTATTGAAGAGCAAA+AGG | 0.427969 | 8.4:+2106089 | MS.gene035571:CDS |
| GTAATAATAAAACTAATATT+GGG | 0.428154 | 8.4:+2106801 | MS.gene035571:CDS |
| GTCTGCTTCATTTACTAGGT+CGG | 0.430421 | 8.4:-2104151 | None:intergenic |
| CACAAAGTGAAGAATTTAAA+CGG | 0.430749 | 8.4:+2103976 | MS.gene035571:CDS |
| TGAAAGAGAAAATAGAAAAT+CGG | 0.433278 | 8.4:+2104605 | MS.gene035571:CDS |
| TTGACAGCTTCGACCAAAGC+CGG | 0.434672 | 8.4:-2104186 | None:intergenic |
| TATAATTGTGGAGGGCCAAT+CGG | 0.436933 | 8.4:+2104522 | MS.gene035571:CDS |
| CCCATGATGTTTAGTTTCAA+AGG | 0.437487 | 8.4:-2104427 | None:intergenic |
| AAACAGAAACGCCAAACAAA+AGG | 0.444045 | 8.4:+2104095 | MS.gene035571:CDS |
| AGATCCTTCGCACCTCCTCA+TGG | 0.450183 | 8.4:-2104979 | None:intergenic |
| TAATTCTCAACCTGCGGTAC+AGG | 0.455932 | 8.4:-2104213 | None:intergenic |
| GCGAAGGATCTTGGAAGAAC+AGG | 0.456862 | 8.4:+2104991 | MS.gene035571:CDS |
| CAGTTTCTGCCTCTCTTGAT+CGG | 0.457451 | 8.4:-2105095 | None:intergenic |
| GTTACTCTTGTTGGCTTCAA+AGG | 0.458746 | 8.4:+2106038 | MS.gene035571:CDS |
| ATAATTGTGGAGGGCCAATC+GGG | 0.458752 | 8.4:+2104523 | MS.gene035571:CDS |
| TGGAGATTGAGGAACTAAAA+GGG | 0.462021 | 8.4:+2106320 | MS.gene035571:CDS |
| TAGCTGATGAGAATGTCTTC+AGG | 0.469727 | 8.4:+2106070 | MS.gene035571:CDS |
| TCCTTTGAAACTAAACATCA+TGG | 0.472800 | 8.4:+2104426 | MS.gene035571:CDS |
| ATTTGAGCTATGGAACTTCA+AGG | 0.478463 | 8.4:+2106865 | MS.gene035571:CDS |
| TTCCGAAGGTACTCCCCGAT+TGG | 0.479350 | 8.4:-2104537 | None:intergenic |
| TGCTGAACCTTTGCTTACTC+CGG | 0.483792 | 8.4:-2104073 | None:intergenic |
| CCATCCATAAATGTCTGAAC+TGG | 0.485326 | 8.4:-2104481 | None:intergenic |
| TGACAGCTTCGACCAAAGCC+GGG | 0.488259 | 8.4:-2104185 | None:intergenic |
| TAATATTGGGACGAAAAGAA+TGG | 0.490015 | 8.4:+2106814 | MS.gene035571:CDS |
| CACCATCCATGAAGAATACA+TGG | 0.492568 | 8.4:-2104335 | None:intergenic |
| AAAGGCAAACCACCTCGCTC+TGG | 0.499352 | 8.4:+2104113 | MS.gene035571:CDS |
| GATTTGATGCAACATGCAAC+CGG | 0.499938 | 8.4:+2104054 | MS.gene035571:CDS |
| AAAATTAGAAATGGAGATTG+AGG | 0.501255 | 8.4:+2106309 | MS.gene035571:CDS |
| TCAGCCTTCCTTTGTTCCGA+AGG | 0.504609 | 8.4:-2104551 | None:intergenic |
| GGATGCTGGAGGAGAAAGAC+AGG | 0.505595 | 8.4:+2104715 | MS.gene035571:CDS |
| TAATGTCAATTTCATTGGCT+AGG | 0.506445 | 8.4:-2104632 | None:intergenic |
| CAGTTCAGACATTTATGGAT+GGG | 0.508021 | 8.4:+2104482 | MS.gene035571:CDS |
| GAAGAAGGAATGGAATTCAA+TGG | 0.511745 | 8.4:+2104449 | MS.gene035571:CDS |
| CATGTCCATAAGTAGGATGC+TGG | 0.514097 | 8.4:+2104701 | MS.gene035571:CDS |
| AACATCATGGGAAGAAGGAA+TGG | 0.514921 | 8.4:+2104439 | MS.gene035571:CDS |
| CGCAGGTTGAGAATTATGTC+TGG | 0.517832 | 8.4:+2104220 | MS.gene035571:CDS |
| AATTATGTCTGGCCATGGAC+AGG | 0.519380 | 8.4:+2104231 | MS.gene035571:CDS |
| CTCAGGTGCCCATATTGTGC+TGG | 0.519768 | 8.4:+2104003 | MS.gene035571:CDS |
| AACTAAACATCATGGGAAGA+AGG | 0.520666 | 8.4:+2104434 | MS.gene035571:CDS |
| CCAGTTCAGACATTTATGGA+TGG | 0.523268 | 8.4:+2104481 | MS.gene035571:CDS |
| TATCAGTGAGTCTGAGATTG+AGG | 0.524793 | 8.4:+2103912 | MS.gene035571:CDS |
| AATATTGGGACGAAAAGAAT+GGG | 0.525422 | 8.4:+2106815 | MS.gene035571:CDS |
| ATTTGCAAAGTACAGACCAT+TGG | 0.526943 | 8.4:+2104308 | MS.gene035571:CDS |
| CTTATTTAGATCTCTGCTCC+AGG | 0.528367 | 8.4:-2105059 | None:intergenic |
| GATCCTTCGCACCTCCTCAT+GGG | 0.531486 | 8.4:-2104978 | None:intergenic |
| ATGGAATTCAATGGACATGC+AGG | 0.532227 | 8.4:+2104458 | MS.gene035571:CDS |
| GGGGTTAAATGAAATGCTGA+AGG | 0.533320 | 8.4:+2106778 | MS.gene035571:intron |
| CGTGAAGATGATTATAATTG+TGG | 0.540581 | 8.4:+2104510 | MS.gene035571:CDS |
| TGATTCTGGATACTGGCTAA+AGG | 0.547223 | 8.4:+2104284 | MS.gene035571:CDS |
| TAGTAGACTTCATCAATGAC+TGG | 0.548076 | 8.4:+2104370 | MS.gene035571:CDS |
| CTTCATGGATGGTGACACTC+AGG | 0.551198 | 8.4:+2104344 | MS.gene035571:CDS |
| AAATGCGGAAGCTTGATACC+TGG | 0.551489 | 8.4:+2105041 | MS.gene035571:CDS |
| ACTGGAAGAGGACAAGAAGA+AGG | 0.555312 | 8.4:+2105114 | MS.gene035571:CDS |
| TTGAGAATTATGTCTGGCCA+TGG | 0.559406 | 8.4:+2104226 | MS.gene035571:CDS |
| AGAGGATCATGTCCATAAGT+AGG | 0.561441 | 8.4:+2104694 | MS.gene035571:CDS |
| ATGGGAGACCTTAATGCTGA+AGG | 0.562568 | 8.4:+2106833 | MS.gene035571:CDS |
| TGAATTGGAAGAAAGTTTGG+AGG | 0.564539 | 8.4:+2106417 | MS.gene035571:CDS |
| TGTCAACCAACCTGTACCGC+AGG | 0.572117 | 8.4:+2104203 | MS.gene035571:CDS |
| TCTGGCGCTCCTTGTCAATG+AGG | 0.572379 | 8.4:-2106462 | None:intergenic |
| GGTATGCTGAATTTGAGCTA+TGG | 0.573218 | 8.4:+2106855 | MS.gene035571:CDS |
| AGCAGACCAAATACCTCCCC+CGG | 0.574685 | 8.4:+2104167 | MS.gene035571:CDS |
| GACTTCATCAATGACTGGAA+TGG | 0.577060 | 8.4:+2104375 | MS.gene035571:CDS |
| CTACAACTCTGAAGAAGAGT+CGG | 0.583611 | 8.4:+2103888 | MS.gene035571:CDS |
| ACTTAAGCGCAAGAGAGGAT+AGG | 0.584806 | 8.4:+2106946 | MS.gene035571:CDS |
| GAAGATGATTATAATTGTGG+AGG | 0.585641 | 8.4:+2104513 | MS.gene035571:CDS |
| AGAAGTTATTACTTATATCG+TGG | 0.586754 | 8.4:+2106910 | MS.gene035571:CDS |
| AGTACCTTCGGAACAAAGGA+AGG | 0.587192 | 8.4:+2104547 | MS.gene035571:CDS |
| AGAGAGGCAGAAACTGGAAG+AGG | 0.587763 | 8.4:+2105102 | MS.gene035571:CDS |
| TGGGAGACCTTAATGCTGAA+GGG | 0.590968 | 8.4:+2106834 | MS.gene035571:CDS |
| AAGAATACATGGACATCCAA+TGG | 0.592903 | 8.4:-2104324 | None:intergenic |
| GACAGCTTCGACCAAAGCCG+GGG | 0.593808 | 8.4:-2104184 | None:intergenic |
| TTAACAATTATGCCTGTCCA+TGG | 0.594850 | 8.4:-2104243 | None:intergenic |
| GAACTTCAAGGAACAGAGGA+AGG | 0.596171 | 8.4:+2106877 | MS.gene035571:CDS |
| GTCCATGTATTCTTCATGGA+TGG | 0.597803 | 8.4:+2104333 | MS.gene035571:CDS |
| CCTTATAAGGAGTTAAAGGA+TGG | 0.598931 | 8.4:+2103949 | MS.gene035571:CDS |
| AGAATTTAAACGGCACACTC+AGG | 0.609073 | 8.4:+2103986 | MS.gene035571:CDS |
| GGGGAGTACCTTCGGAACAA+AGG | 0.609491 | 8.4:+2104543 | MS.gene035571:CDS |
| AAGCAACTTAAGCGCAAGAG+AGG | 0.619700 | 8.4:+2106941 | MS.gene035571:CDS |
| TGCAGTATAAGTATAATGAG+AGG | 0.621962 | 8.4:+2104676 | MS.gene035571:CDS |
| AAGCCCATGAGGAGGTGCGA+AGG | 0.622847 | 8.4:+2104975 | MS.gene035571:intron |
| AGGTACTAACCGATCAAGAG+AGG | 0.623269 | 8.4:+2105086 | MS.gene035571:CDS |
| TCTCAACCTGCGGTACAGGT+TGG | 0.626635 | 8.4:-2104209 | None:intergenic |
| CCTTTGAAACTAAACATCAT+GGG | 0.626908 | 8.4:+2104427 | MS.gene035571:CDS |
| AAGATGATTATAATTGTGGA+GGG | 0.627167 | 8.4:+2104514 | MS.gene035571:CDS |
| CATGCAACCGGAGTAAGCAA+AGG | 0.637786 | 8.4:+2104066 | MS.gene035571:CDS |
| GGGTTAAATGAAATGCTGAA+GGG | 0.639837 | 8.4:+2106779 | MS.gene035571:CDS |
| GAATCAAATCCTCATTGACA+AGG | 0.659917 | 8.4:+2106453 | MS.gene035571:CDS |
| GTCCATAAGTAGGATGCTGG+AGG | 0.664077 | 8.4:+2104704 | MS.gene035571:CDS |
| AAAACTTTGCCAGAGCGAGG+TGG | 0.669720 | 8.4:-2104122 | None:intergenic |
| ACAGCTTCGACCAAAGCCGG+GGG | 0.670168 | 8.4:-2104183 | None:intergenic |
| CAGAGATCTAAATAAGCGTG+AGG | 0.673270 | 8.4:+2105066 | MS.gene035571:CDS |
| CAGACATAATTCTCAACCTG+CGG | 0.676717 | 8.4:-2104219 | None:intergenic |
| TAATTGTGGAGGGCCAATCG+GGG | 0.679230 | 8.4:+2104524 | MS.gene035571:CDS |
| GCGGCGTAAAGCCCATGAGG+AGG | 0.682401 | 8.4:+2104967 | MS.gene035571:intron |
| TATGGAACTTCAAGGAACAG+AGG | 0.683112 | 8.4:+2106873 | MS.gene035571:CDS |
| TGTCCTTCTAGAAAGACTCG+AGG | 0.692197 | 8.4:+2106010 | MS.gene035571:intron |
| TATGCGGCGTAAAGCCCATG+AGG | 0.709522 | 8.4:+2104964 | MS.gene035571:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAATAATAAAACTAATATT+GGG | + | chr8.4:2106801-2106820 | MS.gene035571:CDS | 10.0% |
| !! | TTGTCAAAAAATTAATAAAA+AGG | - | chr8.4:2105744-2105763 | None:intergenic | 10.0% |
| !!! | TTTTTAATCCAAAAAAATAA+AGG | - | chr8.4:2105842-2105861 | None:intergenic | 10.0% |
| !! | ATAAATTCTATTCATTAGAT+TGG | - | chr8.4:2105677-2105696 | None:intergenic | 15.0% |
| !! | ATGCATATATAAAATAAGAT+GGG | + | chr8.4:2105607-2105626 | MS.gene035571:intron | 15.0% |
| !! | GGTAATAATAAAACTAATAT+TGG | + | chr8.4:2106800-2106819 | MS.gene035571:CDS | 15.0% |
| !! | TCTAATGAATAGAATTTATT+TGG | + | chr8.4:2105678-2105697 | MS.gene035571:intron | 15.0% |
| !!! | AAAATCATCCTTTATTTTTT+TGG | + | chr8.4:2105831-2105850 | MS.gene035571:intron | 15.0% |
| !!! | TTATTTTATTATTAGAGTCT+AGG | + | chr8.4:2104939-2104958 | MS.gene035571:intron | 15.0% |
| !!! | TTTTTACAAATATATGGTTT+TGG | + | chr8.4:2105451-2105470 | MS.gene035571:intron | 15.0% |
| !! | ATTTGTAATGTCAATTTCAT+TGG | - | chr8.4:2104640-2104659 | None:intergenic | 20.0% |
| !! | CATGCATATATAAAATAAGA+TGG | + | chr8.4:2105606-2105625 | MS.gene035571:intron | 20.0% |
| !! | TCTAATGTTCTTGTAATATT+AGG | + | chr8.4:2105714-2105733 | MS.gene035571:intron | 20.0% |
| !! | TGAAAGAGAAAATAGAAAAT+CGG | + | chr8.4:2104605-2104624 | MS.gene035571:CDS | 20.0% |
| !! | TGAAATATCAATGTATACTT+TGG | + | chr8.4:2105415-2105434 | MS.gene035571:intron | 20.0% |
| !! | TGAAGCTATTAAGAAAAAAA+TGG | + | chr8.4:2106381-2106400 | MS.gene035571:CDS | 20.0% |
| !! | TGCATATATAAAATAAGATG+GGG | + | chr8.4:2105608-2105627 | MS.gene035571:intron | 20.0% |
| !!! | GTCTAATTTCTATTGTTTTA+GGG | + | chr8.4:2106758-2106777 | MS.gene035571:intron | 20.0% |
| !!! | TAAAAAAAAAGCACTTTGTT+AGG | - | chr8.4:2105295-2105314 | None:intergenic | 20.0% |
| !!! | TCTAATTTCTATTGTTTTAG+GGG | + | chr8.4:2106759-2106778 | MS.gene035571:intron | 20.0% |
| !!! | TGTCTAATTTCTATTGTTTT+AGG | + | chr8.4:2106757-2106776 | MS.gene035571:intron | 20.0% |
| !!! | TTTTAAATGTTTTTTGTTGC+TGG | + | chr8.4:2105170-2105189 | MS.gene035571:intron | 20.0% |
| ! | AAAAGTTGGATTCACTTAAA+GGG | - | chr8.4:2105329-2105348 | None:intergenic | 25.0% |
| ! | AAAATTAGAAATGGAGATTG+AGG | + | chr8.4:2106309-2106328 | MS.gene035571:CDS | 25.0% |
| ! | AAACACAAAAAATGAAGGAA+AGG | + | chr8.4:2105510-2105529 | MS.gene035571:intron | 25.0% |
| ! | AAATTAGACAGAGAAAAATG+AGG | - | chr8.4:2106747-2106766 | None:intergenic | 25.0% |
| ! | AAGATGATTATAATTGTGGA+GGG | + | chr8.4:2104514-2104533 | MS.gene035571:CDS | 25.0% |
| ! | AATTAGACAGAGAAAAATGA+GGG | - | chr8.4:2106746-2106765 | None:intergenic | 25.0% |
| ! | ACAAGAAGATAAAGGTTAAA+AGG | - | chr8.4:2106606-2106625 | None:intergenic | 25.0% |
| ! | AGAAGTTATTACTTATATCG+TGG | + | chr8.4:2106910-2106929 | MS.gene035571:CDS | 25.0% |
| ! | ATGAATTGGATGAAAAAATG+CGG | + | chr8.4:2105026-2105045 | MS.gene035571:CDS | 25.0% |
| ! | CACAAAGTGAAGAATTTAAA+CGG | + | chr8.4:2103976-2103995 | MS.gene035571:CDS | 25.0% |
| ! | GAAGAAAGAGTTCAAATATA+AGG | + | chr8.4:2104032-2104051 | MS.gene035571:CDS | 25.0% |
| ! | GAAGTAATATTTGAATCTTG+AGG | - | chr8.4:2105988-2106007 | None:intergenic | 25.0% |
| ! | TAAAAGTTGGATTCACTTAA+AGG | - | chr8.4:2105330-2105349 | None:intergenic | 25.0% |
| ! | TATAAACGAGAGTAAATAGA+GGG | - | chr8.4:2106119-2106138 | None:intergenic | 25.0% |
| ! | TATCCAAACACAAAAAATGA+AGG | + | chr8.4:2105505-2105524 | MS.gene035571:intron | 25.0% |
| ! | TCAAGAATACAAGAAGATAA+AGG | - | chr8.4:2106614-2106633 | None:intergenic | 25.0% |
| ! | TGCCAAACAAAAATTAGAAA+TGG | + | chr8.4:2106300-2106319 | MS.gene035571:CDS | 25.0% |
| ! | TTATAAACGAGAGTAAATAG+AGG | - | chr8.4:2106120-2106139 | None:intergenic | 25.0% |
| !! | CTCCATTTCTAATTTTTGTT+TGG | - | chr8.4:2106305-2106324 | None:intergenic | 25.0% |
| !! | TAAGTGAATCCAACTTTTAT+TGG | + | chr8.4:2105331-2105350 | MS.gene035571:intron | 25.0% |
| !! | TAGAAAAGCATAAATGATCA+AGG | + | chr8.4:2105567-2105586 | MS.gene035571:intron | 25.0% |
| !! | TCACAATAATCAAAAGCTTT+TGG | - | chr8.4:2105395-2105414 | None:intergenic | 25.0% |
| !! | TTTCTATTTTCTCTTTCAGA+TGG | - | chr8.4:2104603-2104622 | None:intergenic | 25.0% |
| !!! | TTTCCTTCATTTTTTGTGTT+TGG | - | chr8.4:2105511-2105530 | None:intergenic | 25.0% |
| !!! | TTTTGCCTTATTGTATGTAA+AGG | + | chr8.4:2104787-2104806 | MS.gene035571:intron | 25.0% |
| AATATTGGGACGAAAAGAAT+GGG | + | chr8.4:2106815-2106834 | MS.gene035571:CDS | 30.0% | |
| ACGAAATTTCGACATAAATG+AGG | - | chr8.4:2105486-2105505 | None:intergenic | 30.0% | |
| AGAACAACAAAATATCATGC+AGG | - | chr8.4:2106689-2106708 | None:intergenic | 30.0% | |
| ATACTCTGACAAACCTTATA+AGG | + | chr8.4:2103936-2103955 | MS.gene035571:CDS | 30.0% | |
| ATGAAGGAAAGGAAAGTAAA+AGG | + | chr8.4:2105521-2105540 | MS.gene035571:intron | 30.0% | |
| ATTAGACAGAGAAAAATGAG+GGG | - | chr8.4:2106745-2106764 | None:intergenic | 30.0% | |
| CAAACCTTATAAGGAGTTAA+AGG | + | chr8.4:2103945-2103964 | MS.gene035571:CDS | 30.0% | |
| CGTGAAGATGATTATAATTG+TGG | + | chr8.4:2104510-2104529 | MS.gene035571:CDS | 30.0% | |
| CTTAAACAAGATCCTTCAAT+TGG | + | chr8.4:2106264-2106283 | MS.gene035571:CDS | 30.0% | |
| GAAGATGATTATAATTGTGG+AGG | + | chr8.4:2104513-2104532 | MS.gene035571:CDS | 30.0% | |
| GAGTAGAAAAAAACTTGCAT+AGG | + | chr8.4:2104871-2104890 | MS.gene035571:intron | 30.0% | |
| TAATATTGGGACGAAAAGAA+TGG | + | chr8.4:2106814-2106833 | MS.gene035571:CDS | 30.0% | |
| TACTGAATTGGAAGAAAGTT+TGG | + | chr8.4:2106414-2106433 | MS.gene035571:CDS | 30.0% | |
| TATATAAAATAAGATGGGGC+AGG | + | chr8.4:2105612-2105631 | MS.gene035571:intron | 30.0% | |
| TGCAGTATAAGTATAATGAG+AGG | + | chr8.4:2104676-2104695 | MS.gene035571:CDS | 30.0% | |
| TGGGATGAAAAAAAACACAT+CGG | - | chr8.4:2105900-2105919 | None:intergenic | 30.0% | |
| TTGCAAGTTATGAAACATCT+TGG | + | chr8.4:2106346-2106365 | MS.gene035571:CDS | 30.0% | |
| ! | ACTTATACTGCATTTTGTAG+AGG | - | chr8.4:2104668-2104687 | None:intergenic | 30.0% |
| ! | CAATTGAAGGATCTTGTTTA+AGG | - | chr8.4:2106266-2106285 | None:intergenic | 30.0% |
| ! | TAATGTCAATTTCATTGGCT+AGG | - | chr8.4:2104635-2104654 | None:intergenic | 30.0% |
| ! | TATGCTTTTCTACTTTGCTA+AGG | - | chr8.4:2105559-2105578 | None:intergenic | 30.0% |
| !! | AATCTATGCAACTTGTTAGT+TGG | - | chr8.4:2106643-2106662 | None:intergenic | 30.0% |
| !! | CCTTTGAAACTAAACATCAT+GGG | + | chr8.4:2104427-2104446 | MS.gene035571:CDS | 30.0% |
| !! | CTAATCTTTTAGAAGGACAA+TGG | - | chr8.4:2105220-2105239 | None:intergenic | 30.0% |
| !! | TCCTTTGAAACTAAACATCA+TGG | + | chr8.4:2104426-2104445 | MS.gene035571:CDS | 30.0% |
| !!! | CTGATGATTTTAAAGTATCG+AGG | - | chr8.4:2105950-2105969 | None:intergenic | 30.0% |
| !!! | TCTTTTTTCCAGCACAATAT+GGG | - | chr8.4:2104014-2104033 | None:intergenic | 30.0% |
| !!! | TTCTTTTTTCCAGCACAATA+TGG | - | chr8.4:2104015-2104034 | None:intergenic | 30.0% |
| AAACAGAAACGCCAAACAAA+AGG | + | chr8.4:2104095-2104114 | MS.gene035571:CDS | 35.0% | |
| AACTAAACATCATGGGAAGA+AGG | + | chr8.4:2104434-2104453 | MS.gene035571:CDS | 35.0% | |
| AAGAATACATGGACATCCAA+TGG | - | chr8.4:2104327-2104346 | None:intergenic | 35.0% | |
| AAGAGCAACCTTAATGATTC+TGG | + | chr8.4:2104270-2104289 | MS.gene035571:CDS | 35.0% | |
| ACCTTAATGATTCTGGATAC+TGG | + | chr8.4:2104277-2104296 | MS.gene035571:CDS | 35.0% | |
| AGCAAGTAGAGATTAGAATG+TGG | - | chr8.4:2105920-2105939 | None:intergenic | 35.0% | |
| ATGGAGATTGAGGAACTAAA+AGG | + | chr8.4:2106319-2106338 | MS.gene035571:CDS | 35.0% | |
| ATTTGAGCTATGGAACTTCA+AGG | + | chr8.4:2106865-2106884 | MS.gene035571:CDS | 35.0% | |
| ATTTGCAAAGTACAGACCAT+TGG | + | chr8.4:2104308-2104327 | MS.gene035571:CDS | 35.0% | |
| CACAGCCTTTACATACAATA+AGG | - | chr8.4:2104795-2104814 | None:intergenic | 35.0% | |
| CAGTTCAGACATTTATGGAT+GGG | + | chr8.4:2104482-2104501 | MS.gene035571:CDS | 35.0% | |
| CCATCCTTTAACTCCTTATA+AGG | - | chr8.4:2103952-2103971 | None:intergenic | 35.0% | |
| CCTTATAAGGAGTTAAAGGA+TGG | + | chr8.4:2103949-2103968 | MS.gene035571:CDS | 35.0% | |
| GAAGAAGGAATGGAATTCAA+TGG | + | chr8.4:2104449-2104468 | MS.gene035571:CDS | 35.0% | |
| GAATCAAATCCTCATTGACA+AGG | + | chr8.4:2106453-2106472 | MS.gene035571:CDS | 35.0% | |
| GCAAGTAGAGATTAGAATGT+GGG | - | chr8.4:2105919-2105938 | None:intergenic | 35.0% | |
| GGAAAAGTTGCGTAATGAAT+TGG | + | chr8.4:2105012-2105031 | MS.gene035571:CDS | 35.0% | |
| GGGATGAAAAAAAACACATC+GGG | - | chr8.4:2105899-2105918 | None:intergenic | 35.0% | |
| GGGTTAAATGAAATGCTGAA+GGG | + | chr8.4:2106779-2106798 | MS.gene035571:CDS | 35.0% | |
| GTTCTGCTGTGAATATATTG+TGG | + | chr8.4:2106704-2106723 | MS.gene035571:intron | 35.0% | |
| TAGTAGACTTCATCAATGAC+TGG | + | chr8.4:2104370-2104389 | MS.gene035571:CDS | 35.0% | |
| TGAATTGGAAGAAAGTTTGG+AGG | + | chr8.4:2106417-2106436 | MS.gene035571:CDS | 35.0% | |
| TGGAGATTGAGGAACTAAAA+GGG | + | chr8.4:2106320-2106339 | MS.gene035571:CDS | 35.0% | |
| TTAACAATTATGCCTGTCCA+TGG | - | chr8.4:2104246-2104265 | None:intergenic | 35.0% | |
| TTAGACAGAGAAAAATGAGG+GGG | - | chr8.4:2106744-2106763 | None:intergenic | 35.0% | |
| TTCACTTAAAGGGAGTCAAT+AGG | - | chr8.4:2105319-2105338 | None:intergenic | 35.0% | |
| TTTGGTCTGCTTCATTTACT+AGG | - | chr8.4:2104158-2104177 | None:intergenic | 35.0% | |
| ! | CCCATGATGTTTAGTTTCAA+AGG | - | chr8.4:2104430-2104449 | None:intergenic | 35.0% |
| ! | CTTCACAATGCTTTTGTTGA+AGG | + | chr8.4:2104738-2104757 | MS.gene035571:CDS | 35.0% |
| ! | GACAGGTCTAATCTTTTAGA+AGG | - | chr8.4:2105227-2105246 | None:intergenic | 35.0% |
| ! | TATTAGAGTCTAGGAGTATG+CGG | + | chr8.4:2104948-2104967 | MS.gene035571:intron | 35.0% |
| ! | TCTTTTTCTCTCTGGTAGTT+TGG | - | chr8.4:2106238-2106257 | None:intergenic | 35.0% |
| !! | GGAAGAAATGAGTACTGAAT+TGG | + | chr8.4:2106402-2106421 | MS.gene035571:CDS | 35.0% |
| !!! | CTAGTTGCTTTTCCAATTGA+AGG | - | chr8.4:2106279-2106298 | None:intergenic | 35.0% |
| AACATCATGGGAAGAAGGAA+TGG | + | chr8.4:2104439-2104458 | MS.gene035571:CDS | 40.0% | |
| AAGATGGGGCAGGATTTAAT+TGG | + | chr8.4:2105622-2105641 | MS.gene035571:intron | 40.0% | |
| AGAATTTAAACGGCACACTC+AGG | + | chr8.4:2103986-2104005 | MS.gene035571:CDS | 40.0% | |
| AGAGGATCATGTCCATAAGT+AGG | + | chr8.4:2104694-2104713 | MS.gene035571:CDS | 40.0% | |
| AGGAAGGCTGAGAACAATTT+CGG | + | chr8.4:2104563-2104582 | MS.gene035571:CDS | 40.0% | |
| ATGGAATTCAATGGACATGC+AGG | + | chr8.4:2104458-2104477 | MS.gene035571:CDS | 40.0% | |
| ATTAGACCTGTCTTTGTCGA+TGG | + | chr8.4:2105235-2105254 | MS.gene035571:intron | 40.0% | |
| ATTCCTCGAGTCTTTCTAGA+AGG | - | chr8.4:2106016-2106035 | None:intergenic | 40.0% | |
| CACCATCCATGAAGAATACA+TGG | - | chr8.4:2104338-2104357 | None:intergenic | 40.0% | |
| CAGACATAATTCTCAACCTG+CGG | - | chr8.4:2104222-2104241 | None:intergenic | 40.0% | |
| CAGAGATCTAAATAAGCGTG+AGG | + | chr8.4:2105066-2105085 | MS.gene035571:CDS | 40.0% | |
| CAGGCTTATTGAAGAGCAAA+AGG | + | chr8.4:2106089-2106108 | MS.gene035571:CDS | 40.0% | |
| CCAGTTCAGACATTTATGGA+TGG | + | chr8.4:2104481-2104500 | MS.gene035571:CDS | 40.0% | |
| CCATCCATAAATGTCTGAAC+TGG | - | chr8.4:2104484-2104503 | None:intergenic | 40.0% | |
| CTACCAGAGAGAAAAAGAAG+AGG | + | chr8.4:2106240-2106259 | MS.gene035571:intron | 40.0% | |
| CTTATTTAGATCTCTGCTCC+AGG | - | chr8.4:2105062-2105081 | None:intergenic | 40.0% | |
| CTTGTAGTTCATCATTGCTC+TGG | - | chr8.4:2106483-2106502 | None:intergenic | 40.0% | |
| GACTTCATCAATGACTGGAA+TGG | + | chr8.4:2104375-2104394 | MS.gene035571:CDS | 40.0% | |
| GAGGAATGAGTTACTCTTGT+TGG | + | chr8.4:2106029-2106048 | MS.gene035571:CDS | 40.0% | |
| GATTTGATGCAACATGCAAC+CGG | + | chr8.4:2104054-2104073 | MS.gene035571:CDS | 40.0% | |
| GCCAGTATCCAGAATCATTA+AGG | - | chr8.4:2104281-2104300 | None:intergenic | 40.0% | |
| GGATGTCCATGTATTCTTCA+TGG | + | chr8.4:2104329-2104348 | MS.gene035571:CDS | 40.0% | |
| GGGGTTAAATGAAATGCTGA+AGG | + | chr8.4:2106778-2106797 | MS.gene035571:intron | 40.0% | |
| GGTAGAAGGCCAATAAAAGT+TGG | - | chr8.4:2105343-2105362 | None:intergenic | 40.0% | |
| GGTATGCTGAATTTGAGCTA+TGG | + | chr8.4:2106855-2106874 | MS.gene035571:CDS | 40.0% | |
| GTCCATGTATTCTTCATGGA+TGG | + | chr8.4:2104333-2104352 | MS.gene035571:CDS | 40.0% | |
| GTCTGCTTCATTTACTAGGT+CGG | - | chr8.4:2104154-2104173 | None:intergenic | 40.0% | |
| TAGCTGATGAGAATGTCTTC+AGG | + | chr8.4:2106070-2106089 | MS.gene035571:CDS | 40.0% | |
| TATAATTGTGGAGGGCCAAT+CGG | + | chr8.4:2104522-2104541 | MS.gene035571:CDS | 40.0% | |
| TATGGAACTTCAAGGAACAG+AGG | + | chr8.4:2106873-2106892 | MS.gene035571:CDS | 40.0% | |
| TCCAAATAGCAGATGGTAGA+AGG | - | chr8.4:2105357-2105376 | None:intergenic | 40.0% | |
| TTGAGAATTATGTCTGGCCA+TGG | + | chr8.4:2104226-2104245 | MS.gene035571:CDS | 40.0% | |
| ! | CTACAACTCTGAAGAAGAGT+CGG | + | chr8.4:2103888-2103907 | MS.gene035571:CDS | 40.0% |
| ! | GCTTTTGGCATATAGACTCT+CGG | - | chr8.4:2105380-2105399 | None:intergenic | 40.0% |
| ! | TATCAGTGAGTCTGAGATTG+AGG | + | chr8.4:2103912-2103931 | MS.gene035571:CDS | 40.0% |
| ! | TGATTCTGGATACTGGCTAA+AGG | + | chr8.4:2104284-2104303 | MS.gene035571:CDS | 40.0% |
| !! | GTTACTCTTGTTGGCTTCAA+AGG | + | chr8.4:2106038-2106057 | MS.gene035571:CDS | 40.0% |
| AAAAACACATCGGGCAGATG+TGG | - | chr8.4:2105890-2105909 | None:intergenic | 45.0% | |
| AAATGCGGAAGCTTGATACC+TGG | + | chr8.4:2105041-2105060 | MS.gene035571:CDS | 45.0% | |
| AAGCAACTTAAGCGCAAGAG+AGG | + | chr8.4:2106941-2106960 | MS.gene035571:CDS | 45.0% | |
| AAGGCTGTGTGCTTCATGTT+TGG | + | chr8.4:2104806-2104825 | MS.gene035571:intron | 45.0% | |
| AATTATGTCTGGCCATGGAC+AGG | + | chr8.4:2104231-2104250 | MS.gene035571:CDS | 45.0% | |
| ACTGGAAGAGGACAAGAAGA+AGG | + | chr8.4:2105114-2105133 | MS.gene035571:CDS | 45.0% | |
| AGGATACCATCGACAAAGAC+AGG | - | chr8.4:2105244-2105263 | None:intergenic | 45.0% | |
| AGGCAAATCAAGAGCAACCA+AGG | - | chr8.4:2105275-2105294 | None:intergenic | 45.0% | |
| AGGTACTAACCGATCAAGAG+AGG | + | chr8.4:2105086-2105105 | MS.gene035571:CDS | 45.0% | |
| AGTACCTTCGGAACAAAGGA+AGG | + | chr8.4:2104547-2104566 | MS.gene035571:CDS | 45.0% | |
| ATAATTGTGGAGGGCCAATC+GGG | + | chr8.4:2104523-2104542 | MS.gene035571:CDS | 45.0% | |
| ATGGGAGACCTTAATGCTGA+AGG | + | chr8.4:2106833-2106852 | MS.gene035571:CDS | 45.0% | |
| CAGCATACCCTTCAGCATTA+AGG | - | chr8.4:2106844-2106863 | None:intergenic | 45.0% | |
| CAGGCCAGTTCAGACATTTA+TGG | + | chr8.4:2104477-2104496 | MS.gene035571:CDS | 45.0% | |
| CAGTTTCTGCCTCTCTTGAT+CGG | - | chr8.4:2105098-2105117 | None:intergenic | 45.0% | |
| CATGTCCATAAGTAGGATGC+TGG | + | chr8.4:2104701-2104720 | MS.gene035571:CDS | 45.0% | |
| GAACTTCAAGGAACAGAGGA+AGG | + | chr8.4:2106877-2106896 | MS.gene035571:CDS | 45.0% | |
| GCCTTCTACCATCTGCTATT+TGG | + | chr8.4:2105353-2105372 | MS.gene035571:intron | 45.0% | |
| TAATTCTCAACCTGCGGTAC+AGG | - | chr8.4:2104216-2104235 | None:intergenic | 45.0% | |
| TCAAGAGCAACCAAGGACAT+TGG | - | chr8.4:2105268-2105287 | None:intergenic | 45.0% | |
| TGCTGAACCTTTGCTTACTC+CGG | - | chr8.4:2104076-2104095 | None:intergenic | 45.0% | |
| TGGGAGACCTTAATGCTGAA+GGG | + | chr8.4:2106834-2106853 | MS.gene035571:CDS | 45.0% | |
| TGGTATCCTACCAATGTCCT+TGG | + | chr8.4:2105255-2105274 | MS.gene035571:intron | 45.0% | |
| ! | AGGCCTCTTCTTTTTCTCTC+TGG | - | chr8.4:2106246-2106265 | None:intergenic | 45.0% |
| ! | CGCAGGTTGAGAATTATGTC+TGG | + | chr8.4:2104220-2104239 | MS.gene035571:CDS | 45.0% |
| ! | GCGAATGTCTTCTGCTGATT+TGG | + | chr8.4:2106208-2106227 | MS.gene035571:intron | 45.0% |
| ! | TGTCCTTCTAGAAAGACTCG+AGG | + | chr8.4:2106010-2106029 | MS.gene035571:intron | 45.0% |
| !! | GAGGTGGTTTGCCTTTTGTT+TGG | - | chr8.4:2104109-2104128 | None:intergenic | 45.0% |
| !!! | CGGGCAGATGTGGTTTTTTA+TGG | - | chr8.4:2105880-2105899 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTTACAAATATA+TGG | + | chr8.4:2105445-2105464 | MS.gene035571:intron | 5.0% |
| AAAACTTTGCCAGAGCGAGG+TGG | - | chr8.4:2104125-2104144 | None:intergenic | 50.0% | |
| AGAGAGGCAGAAACTGGAAG+AGG | + | chr8.4:2105102-2105121 | MS.gene035571:CDS | 50.0% | |
| CATGCAACCGGAGTAAGCAA+AGG | + | chr8.4:2104066-2104085 | MS.gene035571:CDS | 50.0% | |
| CCAAAAACTTTGCCAGAGCG+AGG | - | chr8.4:2104128-2104147 | None:intergenic | 50.0% | |
| CGATCAAGAGAGGCAGAAAC+TGG | + | chr8.4:2105096-2105115 | MS.gene035571:CDS | 50.0% | |
| CTCCTCCAGCATCCTACTTA+TGG | - | chr8.4:2104709-2104728 | None:intergenic | 50.0% | |
| CTCTCGGTCCAAATAGCAGA+TGG | - | chr8.4:2105364-2105383 | None:intergenic | 50.0% | |
| CTTCATGGATGGTGACACTC+AGG | + | chr8.4:2104344-2104363 | MS.gene035571:CDS | 50.0% | |
| GAGCAACCAAGGACATTGGT+AGG | - | chr8.4:2105264-2105283 | None:intergenic | 50.0% | |
| GCGAAGGATCTTGGAAGAAC+AGG | + | chr8.4:2104991-2105010 | MS.gene035571:CDS | 50.0% | |
| GTCCATAAGTAGGATGCTGG+AGG | + | chr8.4:2104704-2104723 | MS.gene035571:CDS | 50.0% | |
| TAATTGTGGAGGGCCAATCG+GGG | + | chr8.4:2104524-2104543 | MS.gene035571:CDS | 50.0% | |
| TCAGCCTTCCTTTGTTCCGA+AGG | - | chr8.4:2104554-2104573 | None:intergenic | 50.0% | |
| TTGACAGCTTCGACCAAAGC+CGG | - | chr8.4:2104189-2104208 | None:intergenic | 50.0% | |
| ! | CCTCGCTCTGGCAAAGTTTT+TGG | + | chr8.4:2104125-2104144 | MS.gene035571:CDS | 50.0% |
| AAAGGCAAACCACCTCGCTC+TGG | + | chr8.4:2104113-2104132 | MS.gene035571:CDS | 55.0% | |
| AGATCCTTCGCACCTCCTCA+TGG | - | chr8.4:2104982-2105001 | None:intergenic | 55.0% | |
| AGCAGACCAAATACCTCCCC+CGG | + | chr8.4:2104167-2104186 | MS.gene035571:CDS | 55.0% | |
| CTCAGGTGCCCATATTGTGC+TGG | + | chr8.4:2104003-2104022 | MS.gene035571:CDS | 55.0% | |
| GATCCTTCGCACCTCCTCAT+GGG | - | chr8.4:2104981-2105000 | None:intergenic | 55.0% | |
| GGATGCTGGAGGAGAAAGAC+AGG | + | chr8.4:2104715-2104734 | MS.gene035571:CDS | 55.0% | |
| TATGCGGCGTAAAGCCCATG+AGG | + | chr8.4:2104964-2104983 | MS.gene035571:intron | 55.0% | |
| TCTCAACCTGCGGTACAGGT+TGG | - | chr8.4:2104212-2104231 | None:intergenic | 55.0% | |
| TCTGGCGCTCCTTGTCAATG+AGG | - | chr8.4:2106465-2106484 | None:intergenic | 55.0% | |
| TGACAGCTTCGACCAAAGCC+GGG | - | chr8.4:2104188-2104207 | None:intergenic | 55.0% | |
| TGTCAACCAACCTGTACCGC+AGG | + | chr8.4:2104203-2104222 | MS.gene035571:CDS | 55.0% | |
| ! | TGAGGAGGTGCGAAGGATCT+TGG | + | chr8.4:2104982-2105001 | MS.gene035571:CDS | 55.0% |
| !! | GGGGAGTACCTTCGGAACAA+AGG | + | chr8.4:2104543-2104562 | MS.gene035571:CDS | 55.0% |
| !! | TTCCGAAGGTACTCCCCGAT+TGG | - | chr8.4:2104540-2104559 | None:intergenic | 55.0% |
| ACAGCTTCGACCAAAGCCGG+GGG | - | chr8.4:2104186-2104205 | None:intergenic | 60.0% | |
| CCAAATACCTCCCCCGGCTT+TGG | + | chr8.4:2104173-2104192 | MS.gene035571:CDS | 60.0% | |
| GACAGCTTCGACCAAAGCCG+GGG | - | chr8.4:2104187-2104206 | None:intergenic | 60.0% | |
| ! | AAGCCCATGAGGAGGTGCGA+AGG | + | chr8.4:2104975-2104994 | MS.gene035571:intron | 60.0% |
| !! | CCAAAGCCGGGGGAGGTATT+TGG | - | chr8.4:2104176-2104195 | None:intergenic | 60.0% |
| !! | GGCCAATCGGGGAGTACCTT+CGG | + | chr8.4:2104535-2104554 | MS.gene035571:CDS | 60.0% |
| GCGGCGTAAAGCCCATGAGG+AGG | + | chr8.4:2104967-2104986 | MS.gene035571:intron | 65.0% | |
| GCTTCGACCAAAGCCGGGGG+AGG | - | chr8.4:2104183-2104202 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 2103883 | 2106967 | 2103883 | ID=MS.gene035571 |
| chr8.4 | mRNA | 2103883 | 2106967 | 2103883 | ID=MS.gene035571.t1;Parent=MS.gene035571 |
| chr8.4 | exon | 2103883 | 2104759 | 2103883 | ID=MS.gene035571.t1.exon1;Parent=MS.gene035571.t1 |
| chr8.4 | CDS | 2103883 | 2104759 | 2103883 | ID=cds.MS.gene035571.t1;Parent=MS.gene035571.t1 |
| chr8.4 | exon | 2104978 | 2105135 | 2104978 | ID=MS.gene035571.t1.exon2;Parent=MS.gene035571.t1 |
| chr8.4 | CDS | 2104978 | 2105135 | 2104978 | ID=cds.MS.gene035571.t1;Parent=MS.gene035571.t1 |
| chr8.4 | exon | 2106021 | 2106110 | 2106021 | ID=MS.gene035571.t1.exon3;Parent=MS.gene035571.t1 |
| chr8.4 | CDS | 2106021 | 2106110 | 2106021 | ID=cds.MS.gene035571.t1;Parent=MS.gene035571.t1 |
| chr8.4 | exon | 2106247 | 2106525 | 2106247 | ID=MS.gene035571.t1.exon4;Parent=MS.gene035571.t1 |
| chr8.4 | CDS | 2106247 | 2106525 | 2106247 | ID=cds.MS.gene035571.t1;Parent=MS.gene035571.t1 |
| chr8.4 | exon | 2106779 | 2106967 | 2106779 | ID=MS.gene035571.t1.exon5;Parent=MS.gene035571.t1 |
| chr8.4 | CDS | 2106779 | 2106967 | 2106779 | ID=cds.MS.gene035571.t1;Parent=MS.gene035571.t1 |
| Gene Sequence |
| Protein sequence |
