AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene042280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042280.t1 MTR_4g131350 98.410 629 10 0 1 629 54 682 0.0 1272
MS.gene042280.t1 MTR_4g125920 96.979 629 19 0 1 629 1 629 0.0 1250
MS.gene042280.t1 MTR_4g006760 86.020 608 81 4 22 629 22 625 0.0 1029
MS.gene042280.t1 MTR_4g131310 81.416 452 40 4 1 448 1 412 0.0 665
MS.gene042280.t1 MTR_4g131310 98.551 69 1 0 553 621 389 457 2.24e-36 142
MS.gene042280.t1 MTR_3g067815 42.924 643 344 9 1 626 1 637 7.64e-169 496
MS.gene042280.t1 MTR_5g079940 40.701 656 351 13 5 629 472 1120 1.16e-146 453
MS.gene042280.t1 MTR_5g079940 35.616 146 81 5 1 144 1 135 4.77e-16 82.8
MS.gene042280.t1 MTR_5g079940 41.346 104 51 4 1 103 117 211 4.37e-15 79.7
MS.gene042280.t1 MTR_5g079940 39.535 86 47 2 19 103 247 328 1.65e-13 74.7
MS.gene042280.t1 MTR_5g079940 37.255 102 60 3 4 101 352 453 6.65e-11 66.2
MS.gene042280.t1 MTR_2g097020 35.777 682 348 17 13 629 10 666 2.75e-108 341
MS.gene042280.t1 MTR_2g097010 36.527 668 345 16 26 628 23 676 5.83e-100 319
MS.gene042280.t1 MTR_4g046643 36.817 641 340 17 26 612 23 652 9.07e-100 320
MS.gene042280.t1 MTR_2g095400 36.128 656 349 20 13 628 10 635 6.56e-88 286
MS.gene042280.t1 MTR_4g126200 44.361 266 111 6 383 628 3 251 1.80e-59 200
MS.gene042280.t1 MTR_2g097000 38.583 381 191 9 268 618 10 377 2.04e-56 196
MS.gene042280.t1 MTR_3g067855 48.182 220 110 3 410 629 123 338 1.46e-54 190
MS.gene042280.t1 MTR_3g067845 40.711 253 144 4 378 629 4 251 1.37e-45 163
MS.gene042280.t1 MTR_3g067825 46.939 98 46 2 537 629 7 103 5.50e-20 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042280.t1 AT1G15910 56.361 621 257 7 18 628 17 633 0.0 682
MS.gene042280.t1 AT4G00380 55.323 620 264 6 19 628 18 634 0.0 664
MS.gene042280.t1 AT4G00380 55.323 620 264 6 19 628 18 634 0.0 664
MS.gene042280.t1 AT4G00380 52.181 619 257 6 19 628 18 606 0.0 617
MS.gene042280.t1 AT1G80790 53.140 621 276 7 19 629 19 634 0.0 607
MS.gene042280.t1 AT1G80790 53.140 621 276 7 19 629 19 634 0.0 607
MS.gene042280.t1 AT3G48670 40.630 635 346 10 16 629 21 645 1.71e-149 447
MS.gene042280.t1 AT3G48670 40.630 635 346 10 16 629 21 645 1.71e-149 447
MS.gene042280.t1 AT3G48670 40.630 635 346 10 16 629 21 645 1.71e-149 447
MS.gene042280.t1 AT1G80790 51.876 453 205 6 19 461 19 468 1.78e-148 438
MS.gene042280.t1 AT3G12550 36.364 638 369 12 16 625 5 633 4.76e-117 363
MS.gene042280.t1 AT3G12550 36.207 638 371 11 16 625 5 634 5.45e-117 363
MS.gene042280.t1 AT3G12550 36.207 638 371 11 16 625 5 634 5.45e-117 363
MS.gene042280.t1 AT3G12550 36.207 638 371 11 16 625 5 634 5.45e-117 363
MS.gene042280.t1 AT1G13790 39.768 518 282 8 118 618 219 723 1.59e-103 330
MS.gene042280.t1 AT1G13790 37.662 77 48 0 12 88 3 79 4.01e-12 69.7
MS.gene042280.t1 AT1G13790 39.768 518 282 8 118 618 219 723 1.59e-103 330
MS.gene042280.t1 AT1G13790 37.662 77 48 0 12 88 3 79 4.01e-12 69.7
MS.gene042280.t1 AT3G12550 33.510 567 342 11 16 556 5 562 1.25e-89 290
MS.gene042280.t1 AT5G59390 35.436 539 307 13 114 628 30 551 3.37e-83 272
MS.gene042280.t1 AT5G59390 35.436 539 307 13 114 628 30 551 3.37e-83 272
MS.gene042280.t1 AT5G59390 35.436 539 307 13 114 628 30 551 3.37e-83 272
MS.gene042280.t1 AT5G59390 35.110 544 307 14 114 628 30 556 5.10e-81 266
MS.gene042280.t1 AT5G59390 35.110 544 307 14 114 628 30 556 5.10e-81 266
MS.gene042280.t1 AT4G01180 33.996 553 300 14 114 628 28 553 2.75e-75 251
MS.gene042280.t1 AT4G01780 31.631 509 229 10 123 629 79 470 4.35e-65 221
MS.gene042280.t1 AT3G29375 44.335 203 105 2 426 628 32 226 2.71e-47 166
MS.gene042280.t1 AT3G29375 44.335 203 105 2 426 628 155 349 5.20e-46 167
MS.gene042280.t1 AT2G16490 45.946 74 40 0 555 628 75 148 8.44e-17 79.3
MS.gene042280.t1 AT3G29375 38.843 121 66 2 426 546 32 144 9.18e-17 79.0

Find 144 sgRNAs with CRISPR-Local

Find 227 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACTCTGACCACTTTAAA+AGG 0.163774 8.2:-3719762 None:intergenic
CAATTGAAGGATCTTGTTTA+AGG 0.184121 8.2:-3719013 None:intergenic
CCTCGCTCTGGCAAAGTATT+TGG 0.196923 8.2:+3717150 MS.gene042280:CDS
GGTAATAATAAAACTAATAT+TGG 0.209949 8.2:+3719597 MS.gene042280:CDS
CCATCCTTTAACTCCTTATA+AGG 0.231876 8.2:-3716974 None:intergenic
AAGAGCAACCTTAATGATTC+TGG 0.249360 8.2:+3717295 MS.gene042280:CDS
CAAACCTTATAAGGAGTTAA+AGG 0.267169 8.2:+3716970 MS.gene042280:CDS
GCCAGTATCCAGAATCATTA+AGG 0.269275 8.2:-3717303 None:intergenic
ATGGAGATTGAGGAACTAAA+AGG 0.270338 8.2:+3719069 MS.gene042280:CDS
AATAGAAAGTTTGGAGGATA+TGG 0.275154 8.2:+3719182 MS.gene042280:CDS
CCATGGAGCTTTGCTCTGTT+TGG 0.285950 8.2:+3719709 MS.gene042280:CDS
CAGGCCAGTTCAGACATTTA+TGG 0.299736 8.2:+3717502 MS.gene042280:CDS
GAAGCAAGAGTTCAAATATA+AGG 0.303067 8.2:+3717057 MS.gene042280:CDS
GGCAGACAAAATAGAAAGTT+TGG 0.306256 8.2:+3719173 MS.gene042280:CDS
ATACTCTGACAAACCTTATA+AGG 0.314776 8.2:+3716961 MS.gene042280:CDS
ATTTGTAATGTCAATTTCAT+TGG 0.353548 8.2:-3717662 None:intergenic
AGAAAAGTTGCGTAATGAAT+TGG 0.355859 8.2:+3718037 MS.gene042280:CDS
GTATTCATTTACTTCTTTCA+AGG 0.362185 8.2:-3719980 None:intergenic
TTTGGTCTGCTTCATTTACT+AGG 0.363332 8.2:-3717180 None:intergenic
CTCCTCCAGCATCCTACTTA+AGG 0.373591 8.2:-3717731 None:intergenic
TGCAGGTTGGTTGACAGCTT+CGG 0.383198 8.2:-3717221 None:intergenic
ACTGGAAGAGGACAAGAAAA+AGG 0.383259 8.2:+3718139 MS.gene042280:CDS
TGATCAAGAGAGGCAGAAAC+TGG 0.385206 8.2:+3718121 MS.gene042280:CDS
ACCTTAATGATTCTGGATAC+TGG 0.387551 8.2:+3717302 MS.gene042280:CDS
TTGCAAGTTATGAAACATCT+TGG 0.395938 8.2:+3719096 MS.gene042280:CDS
GAGGAATGAATCACTCTTGT+TGG 0.397647 8.2:+3718783 MS.gene042280:CDS
GGCCAATCGGGGAGTACCTT+CGG 0.401670 8.2:+3717560 MS.gene042280:CDS
CTTAAACAAGATCCTTCAAT+TGG 0.401905 8.2:+3719014 MS.gene042280:CDS
GGAAGAAATGAGCACTGAAT+TGG 0.405229 8.2:+3719152 MS.gene042280:CDS
TTGACAGCTTCGGCCAAAGC+CGG 0.413440 8.2:-3717211 None:intergenic
GGATGTCCATGTATTCTTCA+TGG 0.417376 8.2:+3717354 MS.gene042280:CDS
GGAGCTTTGCTCTGTTTGGC+AGG 0.418461 8.2:+3719713 MS.gene042280:CDS
ATCACTCTTGTTGGCTTCAA+AGG 0.419125 8.2:+3718792 MS.gene042280:CDS
CAGGCTTGTTGAAGAGCAAA+AGG 0.422308 8.2:+3718843 MS.gene042280:CDS
TTTCTTTCTCAAGAAGAAGC+TGG 0.423912 8.2:+3719678 MS.gene042280:CDS
GTAATAATAAAACTAATATT+GGG 0.428154 8.2:+3719598 MS.gene042280:CDS
GTCTGCTTCATTTACTAGGT+CGG 0.430421 8.2:-3717176 None:intergenic
TGACAGCTTCGGCCAAAGCC+GGG 0.430548 8.2:-3717210 None:intergenic
TATAATTGTGGAGGGCCAAT+CGG 0.436933 8.2:+3717547 MS.gene042280:CDS
TACAAAGTGAAGAACTTAAA+CGG 0.437308 8.2:+3717001 MS.gene042280:CDS
CCCATGATGTTTAGTTTCAA+AGG 0.437487 8.2:-3717452 None:intergenic
TGAGGAGGTACGAAGGATCT+TGG 0.441330 8.2:+3718007 MS.gene042280:CDS
AAACAGAAACGCCAAACAAA+AGG 0.444045 8.2:+3717120 MS.gene042280:CDS
TAATTCTCAACCTGCGGTGC+AGG 0.450934 8.2:-3717238 None:intergenic
CCTGTAGTTCATCATTGCTC+TGG 0.453560 8.2:-3719239 None:intergenic
TTCTTTCTCAAGAAGAAGCT+GGG 0.457631 8.2:+3719679 MS.gene042280:CDS
ATAATTGTGGAGGGCCAATC+GGG 0.458752 8.2:+3717548 MS.gene042280:CDS
TGGAGATTGAGGAACTAAAA+GGG 0.462021 8.2:+3719070 MS.gene042280:CDS
GACATCCAATGGTCTGTACT+TGG 0.464959 8.2:-3717338 None:intergenic
TAGCTGATGAGAATGTCTTC+AGG 0.469727 8.2:+3718824 MS.gene042280:CDS
TCCTTTGAAACTAAACATCA+TGG 0.472800 8.2:+3717451 MS.gene042280:CDS
TAATGTCAATTTCATTGGCC+AGG 0.476378 8.2:-3717657 None:intergenic
TTCCGAAGGTACTCCCCGAT+TGG 0.479350 8.2:-3717562 None:intergenic
TGCTGAACCTTTGCTTACTC+CGG 0.483792 8.2:-3717098 None:intergenic
CCATCCATAAATGTCTGAAC+TGG 0.485326 8.2:-3717506 None:intergenic
TAATATTGGGACGAAAAGAA+TGG 0.490015 8.2:+3719611 MS.gene042280:CDS
CACCATCCATGAAGAATACA+TGG 0.492568 8.2:-3717360 None:intergenic
AAAGGCAAACCACCTCGCTC+TGG 0.499352 8.2:+3717138 MS.gene042280:CDS
GATTTGATGCAACATGCAAC+CGG 0.499938 8.2:+3717079 MS.gene042280:CDS
AAAATTAGAAATGGAGATTG+AGG 0.501255 8.2:+3719059 MS.gene042280:CDS
AACATCATGGGAAGAAGGAC+TGG 0.503730 8.2:+3717464 MS.gene042280:CDS
TCAGCCTTCCTTTGTTCCGA+AGG 0.504609 8.2:-3717576 None:intergenic
GGATGCTGGAGGAGAAAGAC+AGG 0.505595 8.2:+3717740 MS.gene042280:CDS
CAGTTCAGACATTTATGGAT+GGG 0.508021 8.2:+3717507 MS.gene042280:CDS
CGCAGGTTGAGAATTATGTC+TGG 0.508239 8.2:+3717245 MS.gene042280:CDS
TGTCAACCAACCTGCACCGC+AGG 0.510588 8.2:+3717228 MS.gene042280:CDS
TAGTAGACTTCAACAATGAC+TGG 0.511067 8.2:+3717395 MS.gene042280:CDS
CATGTCCTTAAGTAGGATGC+TGG 0.511615 8.2:+3717726 MS.gene042280:CDS
TCACTCTGACCACTTTAAAA+GGG 0.512768 8.2:-3719761 None:intergenic
TATCAGTGAGTCTGAGATTG+AGG 0.513014 8.2:+3716937 MS.gene042280:CDS
AATTATGTCTGGCCATGGAC+AGG 0.519380 8.2:+3717256 MS.gene042280:CDS
CTCAGGTGCCCATATTGTGC+TGG 0.519768 8.2:+3717028 MS.gene042280:CDS
AATGGGAGACCTTGATGAGA+AGG 0.520493 8.2:+3719629 MS.gene042280:CDS
TCAAGAAGAAGCTGGGATGA+AGG 0.521240 8.2:+3719686 MS.gene042280:CDS
ACATGAGCTATGGAACTTCA+AGG 0.521861 8.2:+3720026 MS.gene042280:CDS
GACAGCTTCGGCCAAAGCCG+GGG 0.523172 8.2:-3717209 None:intergenic
CCAGTTCAGACATTTATGGA+TGG 0.523268 8.2:+3717506 MS.gene042280:CDS
CTGGCGCTCCTTGACAATGA+GGG 0.524882 8.2:-3719220 None:intergenic
AATATTGGGACGAAAAGAAT+GGG 0.525422 8.2:+3719612 MS.gene042280:CDS
CCAGAGCAATGATGAACTAC+AGG 0.526461 8.2:+3719239 MS.gene042280:CDS
CTTATTTAGATCTCTGCTCC+AGG 0.528367 8.2:-3718084 None:intergenic
AGATCCTTCGTACCTCCTCA+CGG 0.530263 8.2:-3718004 None:intergenic
AACTAAACATCATGGGAAGA+AGG 0.530602 8.2:+3717459 MS.gene042280:CDS
GGGGTTAAATGAAATGCTGA+AGG 0.533320 8.2:+3719575 MS.gene042280:intron
AAATAGCATTGTGGAAAACC+TGG 0.534545 8.2:+3717639 MS.gene042280:CDS
ATTTGCCAAGTACAGACCAT+TGG 0.540423 8.2:+3717333 MS.gene042280:CDS
CGTGAAGATGATTATAATTG+TGG 0.540581 8.2:+3717535 MS.gene042280:CDS
TCTCAACCTGCGGTGCAGGT+TGG 0.544080 8.2:-3717234 None:intergenic
TGATTCTGGATACTGGCTAA+AGG 0.547223 8.2:+3717309 MS.gene042280:CDS
CTTCATGGATGGTGACACTC+AGG 0.551198 8.2:+3717369 MS.gene042280:CDS
AAATGCGGAAGCTTGATACC+TGG 0.551489 8.2:+3718066 MS.gene042280:CDS
AGAAGACCATGTCCTTAAGT+AGG 0.555180 8.2:+3717719 MS.gene042280:CDS
AGAAGCTGGGATGAAGGCCA+TGG 0.556908 8.2:+3719692 MS.gene042280:CDS
TCTGGCGCTCCTTGACAATG+AGG 0.559354 8.2:-3719221 None:intergenic
TTGAGAATTATGTCTGGCCA+TGG 0.559406 8.2:+3717251 MS.gene042280:CDS
TGTACAGCATACCCACCACT+TGG 0.569747 8.2:-3720006 None:intergenic
GATCCTTCGTACCTCCTCAC+GGG 0.574071 8.2:-3718003 None:intergenic
AGCAGACCAAATACCTCCCC+CGG 0.574685 8.2:+3717192 MS.gene042280:CDS
AATGAATACAACCCAAGTGG+TGG 0.575225 8.2:+3719994 MS.gene042280:CDS
GGTATGCTGTACATGAGCTA+TGG 0.579873 8.2:+3720016 MS.gene042280:CDS
ACTTAAGCGCAAGAGAGGAT+AGG 0.584806 8.2:+3720107 MS.gene042280:CDS
GAAGATGATTATAATTGTGG+AGG 0.585641 8.2:+3717538 MS.gene042280:CDS
AGAAGTTATTACTTATATCG+TGG 0.586754 8.2:+3720071 MS.gene042280:CDS
AGTACCTTCGGAACAAAGGA+AGG 0.587192 8.2:+3717572 MS.gene042280:CDS
CCAAACAGAGCAAAGCTCCA+TGG 0.587327 8.2:-3719709 None:intergenic
AGAGAGGCAGAAACTGGAAG+AGG 0.587763 8.2:+3718127 MS.gene042280:CDS
CTGGAATTCAAAGGACATGC+AGG 0.587852 8.2:+3717483 MS.gene042280:CDS
GACTTCAACAATGACTGGAA+TGG 0.589478 8.2:+3717400 MS.gene042280:CDS
GAATCAAACCCTCATTGTCA+AGG 0.592874 8.2:+3719212 MS.gene042280:CDS
AAGAATACATGGACATCCAA+TGG 0.592903 8.2:-3717349 None:intergenic
AGACAAAATAGAAAGTTTGG+AGG 0.593505 8.2:+3719176 MS.gene042280:CDS
TTAACGATTATGCCTGTCCA+TGG 0.594850 8.2:-3717268 None:intergenic
CTTTATAGTACATACCTCAT+GGG 0.595496 8.2:-3719790 None:intergenic
GAACTTCAAGGAACAGAGGA+AGG 0.596171 8.2:+3720038 MS.gene042280:CDS
GTCCATGTATTCTTCATGGA+TGG 0.597803 8.2:+3717358 MS.gene042280:CDS
CCTTATAAGGAGTTAAAGGA+TGG 0.598931 8.2:+3716974 MS.gene042280:CDS
CAGCATCCTACTTAAGGACA+TGG 0.599280 8.2:-3717725 None:intergenic
ACAGCTTCGGCCAAAGCCGG+GGG 0.602001 8.2:-3717208 None:intergenic
CCTTTGAAACTAAACATCAT+GGG 0.603923 8.2:+3717452 MS.gene042280:CDS
GGGGAGTACCTTCGGAACAA+AGG 0.609491 8.2:+3717568 MS.gene042280:CDS
AAGCAACTTAAGCGCAAGAG+AGG 0.619700 8.2:+3720102 MS.gene042280:CDS
AAGATGATTATAATTGTGGA+GGG 0.627167 8.2:+3717539 MS.gene042280:CDS
GAAGAAGGACTGGAATTCAA+AGG 0.628414 8.2:+3717474 MS.gene042280:CDS
CCAAATACTTTGCCAGAGCG+AGG 0.628747 8.2:-3717150 None:intergenic
ATGAATACAACCCAAGTGGT+GGG 0.633174 8.2:+3719995 MS.gene042280:CDS
AGAACTTAAACGGCACACTC+AGG 0.633398 8.2:+3717011 MS.gene042280:CDS
CAGACATAATTCTCAACCTG+CGG 0.633547 8.2:-3717244 None:intergenic
CATGCAACCGGAGTAAGCAA+AGG 0.637786 8.2:+3717091 MS.gene042280:CDS
GGGTTAAATGAAATGCTGAA+GGG 0.639837 8.2:+3719576 MS.gene042280:CDS
AAGCCCGTGAGGAGGTACGA+AGG 0.640443 8.2:+3718000 MS.gene042280:CDS
GACACAGTCAGTTATAGATG+AGG 0.652703 8.2:+3719891 MS.gene042280:intron
GTCCTTAAGTAGGATGCTGG+AGG 0.661594 8.2:+3717729 MS.gene042280:CDS
AGGTACTAACTGATCAAGAG+AGG 0.662179 8.2:+3718111 MS.gene042280:CDS
GTACAGCATACCCACCACTT+GGG 0.664374 8.2:-3720005 None:intergenic
CAGAGATCTAAATAAGCGTG+AGG 0.673270 8.2:+3718091 MS.gene042280:CDS
TGAAAGCAGAAATAGCATTG+TGG 0.673917 8.2:+3717630 MS.gene042280:CDS
AATACTTTGCCAGAGCGAGG+TGG 0.673965 8.2:-3717147 None:intergenic
GTAAATGAATACAACCCAAG+TGG 0.677594 8.2:+3719991 MS.gene042280:CDS
TAATTGTGGAGGGCCAATCG+GGG 0.679230 8.2:+3717549 MS.gene042280:CDS
GCAGCGTAAAGCCCGTGAGG+AGG 0.680045 8.2:+3717992 MS.gene042280:CDS
TATGGAACTTCAAGGAACAG+AGG 0.683112 8.2:+3720034 MS.gene042280:CDS
TGTCTTTCTAGAAAGACTCG+AGG 0.689901 8.2:+3718764 MS.gene042280:intron
CAGAGTGAATGATACCCATG+AGG 0.719794 8.2:+3719776 MS.gene042280:CDS
TATGCAGCGTAAAGCCCGTG+AGG 0.720834 8.2:+3717989 MS.gene042280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAGTATAATAATTAACA+CGG + chr8.2:3719853-3719872 MS.gene042280:intron 10.0%
!! GTAATAATAAAACTAATATT+GGG + chr8.2:3719598-3719617 MS.gene042280:CDS 10.0%
!! ATCAATGTATACTATATATA+TGG + chr8.2:3718444-3718463 MS.gene042280:intron 15.0%
!! GGTAATAATAAAACTAATAT+TGG + chr8.2:3719597-3719616 MS.gene042280:CDS 15.0%
!!! ATTATACTATTTCTAAATTG+AGG - chr8.2:3719845-3719864 None:intergenic 15.0%
!!! TTATTTTATTATTAGAGTCA+AGG + chr8.2:3717964-3717983 MS.gene042280:intron 15.0%
!!! TTTTAAATATTTTTTGTTGC+TGG + chr8.2:3718195-3718214 MS.gene042280:intron 15.0%
!! ATTTGTAATGTCAATTTCAT+TGG - chr8.2:3717665-3717684 None:intergenic 20.0%
!! TATAAACAAGAGTAAATAGA+GGG - chr8.2:3718873-3718892 None:intergenic 20.0%
!! TGAAGCTATTAAGAAAAAAA+TGG + chr8.2:3719131-3719150 MS.gene042280:CDS 20.0%
!! TTATAAACAAGAGTAAATAG+AGG - chr8.2:3718874-3718893 None:intergenic 20.0%
!!! AATTCTTATTTCCTAAAGAA+AGG - chr8.2:3719468-3719487 None:intergenic 20.0%
!!! CTCTAATTTCTATTGTTTTA+GGG + chr8.2:3719555-3719574 MS.gene042280:intron 20.0%
!!! TCTAATTTCTATTGTTTTAG+GGG + chr8.2:3719556-3719575 MS.gene042280:intron 20.0%
!!! TCTCTAATTTCTATTGTTTT+AGG + chr8.2:3719554-3719573 MS.gene042280:intron 20.0%
! AAAATTAGAAATGGAGATTG+AGG + chr8.2:3719059-3719078 MS.gene042280:CDS 25.0%
! AAATTAGAGAGAGAAAAATG+AGG - chr8.2:3719544-3719563 None:intergenic 25.0%
! AAGATGATTATAATTGTGGA+GGG + chr8.2:3717539-3717558 MS.gene042280:CDS 25.0%
! AATTAGAGAGAGAAAAATGA+GGG - chr8.2:3719543-3719562 None:intergenic 25.0%
! ACGAAATTTCAACATAAATG+TGG - chr8.2:3718522-3718541 None:intergenic 25.0%
! AGAAGTTATTACTTATATCG+TGG + chr8.2:3720071-3720090 MS.gene042280:CDS 25.0%
! ATGAATTGGATGAAAAAATG+CGG + chr8.2:3718051-3718070 MS.gene042280:CDS 25.0%
! CAAGAATAGAAAAACATACA+TGG - chr8.2:3717857-3717876 None:intergenic 25.0%
! GAAGTAATATTTGAATCTTG+AGG - chr8.2:3718744-3718763 None:intergenic 25.0%
! GTATTCATTTACTTCTTTCA+AGG - chr8.2:3719983-3720002 None:intergenic 25.0%
! TACAAAGTGAAGAACTTAAA+CGG + chr8.2:3717001-3717020 MS.gene042280:CDS 25.0%
! TGCCAAACAAAAATTAGAAA+TGG + chr8.2:3719050-3719069 MS.gene042280:CDS 25.0%
! TTAAGAATACAAGACGATAA+AGG - chr8.2:3719372-3719391 None:intergenic 25.0%
!! CTCCATTTCTAATTTTTGTT+TGG - chr8.2:3719055-3719074 None:intergenic 25.0%
!! TCACAATAATCAAAAGCTTT+TGG - chr8.2:3718418-3718437 None:intergenic 25.0%
!!! AAAAGCTTTTGATTATTGTG+AGG + chr8.2:3718417-3718436 MS.gene042280:intron 25.0%
!!! ATGATGATTTTAAAGTCTTG+AGG - chr8.2:3718706-3718725 None:intergenic 25.0%
!!! TTTTGCCTTATTGTATGTAA+AGG + chr8.2:3717812-3717831 MS.gene042280:intron 25.0%
AAAGTTGGGATTCACTTAAA+GGG - chr8.2:3718351-3718370 None:intergenic 30.0%
AATAGAAAGTTTGGAGGATA+TGG + chr8.2:3719182-3719201 MS.gene042280:CDS 30.0%
AATATTGGGACGAAAAGAAT+GGG + chr8.2:3719612-3719631 MS.gene042280:CDS 30.0%
ACAAGACGATAAAGGTTAAA+AGG - chr8.2:3719364-3719383 None:intergenic 30.0%
AGAAAAGTTGCGTAATGAAT+TGG + chr8.2:3718037-3718056 MS.gene042280:CDS 30.0%
AGAATGTGAAAAATTCAGCA+TGG + chr8.2:3719736-3719755 MS.gene042280:CDS 30.0%
AGACAAAATAGAAAGTTTGG+AGG + chr8.2:3719176-3719195 MS.gene042280:CDS 30.0%
ATACTCTGACAAACCTTATA+AGG + chr8.2:3716961-3716980 MS.gene042280:CDS 30.0%
ATTAGAGAGAGAAAAATGAG+GGG - chr8.2:3719542-3719561 None:intergenic 30.0%
CAAACCTTATAAGGAGTTAA+AGG + chr8.2:3716970-3716989 MS.gene042280:CDS 30.0%
CGTGAAGATGATTATAATTG+TGG + chr8.2:3717535-3717554 MS.gene042280:CDS 30.0%
CTTAAACAAGATCCTTCAAT+TGG + chr8.2:3719014-3719033 MS.gene042280:CDS 30.0%
CTTTATAGTACATACCTCAT+GGG - chr8.2:3719793-3719812 None:intergenic 30.0%
GAAATTAAAAAAGCTCAAGC+AGG + chr8.2:3719921-3719940 MS.gene042280:CDS 30.0%
GAAGATGATTATAATTGTGG+AGG + chr8.2:3717538-3717557 MS.gene042280:CDS 30.0%
GAAGCAAGAGTTCAAATATA+AGG + chr8.2:3717057-3717076 MS.gene042280:CDS 30.0%
GAGTAGAAAAAAACTTGCAT+AGG + chr8.2:3717896-3717915 MS.gene042280:intron 30.0%
TAATATTGGGACGAAAAGAA+TGG + chr8.2:3719611-3719630 MS.gene042280:CDS 30.0%
TCTTTATAGTACATACCTCA+TGG - chr8.2:3719794-3719813 None:intergenic 30.0%
TTGCAAGTTATGAAACATCT+TGG + chr8.2:3719096-3719115 MS.gene042280:CDS 30.0%
! ACTTATACTGCATTTTGTTG+AGG - chr8.2:3717693-3717712 None:intergenic 30.0%
! CAATTGAAGGATCTTGTTTA+AGG - chr8.2:3719016-3719035 None:intergenic 30.0%
!! AATCTATGCAACTTGTTAGT+TGG - chr8.2:3719401-3719420 None:intergenic 30.0%
!! CCTTTGAAACTAAACATCAT+GGG + chr8.2:3717452-3717471 MS.gene042280:CDS 30.0%
!! TCCTTTGAAACTAAACATCA+TGG + chr8.2:3717451-3717470 MS.gene042280:CDS 30.0%
!!! CTAATTTTTTGCAAGGACAA+TGG - chr8.2:3718242-3718261 None:intergenic 30.0%
!!! TCTTTTTTCCAGCACAATAT+GGG - chr8.2:3717039-3717058 None:intergenic 30.0%
!!! TTCTTTTTTCCAGCACAATA+TGG - chr8.2:3717040-3717059 None:intergenic 30.0%
AAAAAAGCTCAAGCAGGAAT+GGG + chr8.2:3719927-3719946 MS.gene042280:CDS 35.0%
AAACAGAAACGCCAAACAAA+AGG + chr8.2:3717120-3717139 MS.gene042280:CDS 35.0%
AAATAGCATTGTGGAAAACC+TGG + chr8.2:3717639-3717658 MS.gene042280:CDS 35.0%
AACTAAACATCATGGGAAGA+AGG + chr8.2:3717459-3717478 MS.gene042280:CDS 35.0%
AAGAATACATGGACATCCAA+TGG - chr8.2:3717352-3717371 None:intergenic 35.0%
AAGAGCAACCTTAATGATTC+TGG + chr8.2:3717295-3717314 MS.gene042280:CDS 35.0%
ACCTTAATGATTCTGGATAC+TGG + chr8.2:3717302-3717321 MS.gene042280:CDS 35.0%
AGCAAGTAGAGATTAGAAAG+TGG - chr8.2:3718676-3718695 None:intergenic 35.0%
ATGGAGATTGAGGAACTAAA+AGG + chr8.2:3719069-3719088 MS.gene042280:CDS 35.0%
CAAGTTGCATAGATTTCTTC+AGG + chr8.2:3719406-3719425 MS.gene042280:intron 35.0%
CACAGCCTTTACATACAATA+AGG - chr8.2:3717820-3717839 None:intergenic 35.0%
CAGTTCAGACATTTATGGAT+GGG + chr8.2:3717507-3717526 MS.gene042280:CDS 35.0%
CCATCCTTTAACTCCTTATA+AGG - chr8.2:3716977-3716996 None:intergenic 35.0%
CCTTATAAGGAGTTAAAGGA+TGG + chr8.2:3716974-3716993 MS.gene042280:CDS 35.0%
GAAAGTTGGGATTCACTTAA+AGG - chr8.2:3718352-3718371 None:intergenic 35.0%
GATCATCTCTACCTTTCTTT+AGG + chr8.2:3719454-3719473 MS.gene042280:intron 35.0%
GCAAGTAGAGATTAGAAAGT+GGG - chr8.2:3718675-3718694 None:intergenic 35.0%
GGCAGACAAAATAGAAAGTT+TGG + chr8.2:3719173-3719192 MS.gene042280:CDS 35.0%
GGGTTAAATGAAATGCTGAA+GGG + chr8.2:3719576-3719595 MS.gene042280:CDS 35.0%
GTAAATGAATACAACCCAAG+TGG + chr8.2:3719991-3720010 MS.gene042280:CDS 35.0%
TAAAAAAGCTCAAGCAGGAA+TGG + chr8.2:3719926-3719945 MS.gene042280:CDS 35.0%
TAATGTCAATTTCATTGGCC+AGG - chr8.2:3717660-3717679 None:intergenic 35.0%
TAGTAGACTTCAACAATGAC+TGG + chr8.2:3717395-3717414 MS.gene042280:CDS 35.0%
TCACAAAAACCTTCTCATCA+AGG - chr8.2:3719641-3719660 None:intergenic 35.0%
TGAAAGCAGAAATAGCATTG+TGG + chr8.2:3717630-3717649 MS.gene042280:CDS 35.0%
TGGAGATTGAGGAACTAAAA+GGG + chr8.2:3719070-3719089 MS.gene042280:CDS 35.0%
TGGGATGAAAGAAAACACAT+CGG - chr8.2:3718656-3718675 None:intergenic 35.0%
TTAGAGAGAGAAAAATGAGG+GGG - chr8.2:3719541-3719560 None:intergenic 35.0%
TTCACTCTGACCACTTTAAA+AGG - chr8.2:3719765-3719784 None:intergenic 35.0%
TTCACTTAAAGGGAGTGAAT+AGG - chr8.2:3718341-3718360 None:intergenic 35.0%
TTCTTTCTCAAGAAGAAGCT+GGG + chr8.2:3719679-3719698 MS.gene042280:CDS 35.0%
TTTCTTTCTCAAGAAGAAGC+TGG + chr8.2:3719678-3719697 MS.gene042280:CDS 35.0%
TTTGGTCTGCTTCATTTACT+AGG - chr8.2:3717183-3717202 None:intergenic 35.0%
! CCCATGATGTTTAGTTTCAA+AGG - chr8.2:3717455-3717474 None:intergenic 35.0%
! CTTCACAATGCTTTTGTTGA+AGG + chr8.2:3717763-3717782 MS.gene042280:CDS 35.0%
! TCACTCTGACCACTTTAAAA+GGG - chr8.2:3719764-3719783 None:intergenic 35.0%
! TCTTTTTCTCTCTGGTAGTT+TGG - chr8.2:3718988-3719007 None:intergenic 35.0%
!!! CTAGTTGCTTTTCCAATTGA+AGG - chr8.2:3719029-3719048 None:intergenic 35.0%
!!! GACAGGTCTAATTTTTTGCA+AGG - chr8.2:3718249-3718268 None:intergenic 35.0%
AAAAAGCTCAAGCAGGAATG+GGG + chr8.2:3719928-3719947 MS.gene042280:CDS 40.0%
AAGTGAATCCCAACTTTCGT+TGG + chr8.2:3718354-3718373 MS.gene042280:intron 40.0%
AATGAATACAACCCAAGTGG+TGG + chr8.2:3719994-3720013 MS.gene042280:CDS 40.0%
ACATGAGCTATGGAACTTCA+AGG + chr8.2:3720026-3720045 MS.gene042280:CDS 40.0%
ACTGGAAGAGGACAAGAAAA+AGG + chr8.2:3718139-3718158 MS.gene042280:CDS 40.0%
AGAAGACCATGTCCTTAAGT+AGG + chr8.2:3717719-3717738 MS.gene042280:CDS 40.0%
AGGTACTAACTGATCAAGAG+AGG + chr8.2:3718111-3718130 MS.gene042280:CDS 40.0%
ATGAATACAACCCAAGTGGT+GGG + chr8.2:3719995-3720014 MS.gene042280:CDS 40.0%
ATGCAAATCAAGAGCAACCA+AGG - chr8.2:3718297-3718316 None:intergenic 40.0%
ATTAGACCTGTCTTTGTCGA+TGG + chr8.2:3718257-3718276 MS.gene042280:intron 40.0%
ATTTGCCAAGTACAGACCAT+TGG + chr8.2:3717333-3717352 MS.gene042280:CDS 40.0%
CACCATCCATGAAGAATACA+TGG - chr8.2:3717363-3717382 None:intergenic 40.0%
CAGACATAATTCTCAACCTG+CGG - chr8.2:3717247-3717266 None:intergenic 40.0%
CAGAGATCTAAATAAGCGTG+AGG + chr8.2:3718091-3718110 MS.gene042280:CDS 40.0%
CCAGTTCAGACATTTATGGA+TGG + chr8.2:3717506-3717525 MS.gene042280:CDS 40.0%
CCATCCATAAATGTCTGAAC+TGG - chr8.2:3717509-3717528 None:intergenic 40.0%
CTACCAGAGAGAAAAAGAAG+AGG + chr8.2:3718990-3719009 MS.gene042280:intron 40.0%
CTTATTTAGATCTCTGCTCC+AGG - chr8.2:3718087-3718106 None:intergenic 40.0%
GAAGAAGGACTGGAATTCAA+AGG + chr8.2:3717474-3717493 MS.gene042280:CDS 40.0%
GAATCAAACCCTCATTGTCA+AGG + chr8.2:3719212-3719231 MS.gene042280:CDS 40.0%
GACACAGTCAGTTATAGATG+AGG + chr8.2:3719891-3719910 MS.gene042280:intron 40.0%
GACTTCAACAATGACTGGAA+TGG + chr8.2:3717400-3717419 MS.gene042280:CDS 40.0%
GAGGAATGAATCACTCTTGT+TGG + chr8.2:3718783-3718802 MS.gene042280:CDS 40.0%
GATTTGATGCAACATGCAAC+CGG + chr8.2:3717079-3717098 MS.gene042280:CDS 40.0%
GCCAGTATCCAGAATCATTA+AGG - chr8.2:3717306-3717325 None:intergenic 40.0%
GGATGTCCATGTATTCTTCA+TGG + chr8.2:3717354-3717373 MS.gene042280:CDS 40.0%
GGGATGAAAGAAAACACATC+GGG - chr8.2:3718655-3718674 None:intergenic 40.0%
GGGGTTAAATGAAATGCTGA+AGG + chr8.2:3719575-3719594 MS.gene042280:intron 40.0%
GTCCATGTATTCTTCATGGA+TGG + chr8.2:3717358-3717377 MS.gene042280:CDS 40.0%
GTCTGCTTCATTTACTAGGT+CGG - chr8.2:3717179-3717198 None:intergenic 40.0%
TAGCTGATGAGAATGTCTTC+AGG + chr8.2:3718824-3718843 MS.gene042280:CDS 40.0%
TATAATTGTGGAGGGCCAAT+CGG + chr8.2:3717547-3717566 MS.gene042280:CDS 40.0%
TATGGAACTTCAAGGAACAG+AGG + chr8.2:3720034-3720053 MS.gene042280:CDS 40.0%
TCAGCAGAAGACATTCACAA+TGG - chr8.2:3718956-3718975 None:intergenic 40.0%
TTAACGATTATGCCTGTCCA+TGG - chr8.2:3717271-3717290 None:intergenic 40.0%
TTGAGAATTATGTCTGGCCA+TGG + chr8.2:3717251-3717270 MS.gene042280:CDS 40.0%
! GTGAATGTCTTCTGCTGATT+TGG + chr8.2:3718958-3718977 MS.gene042280:intron 40.0%
! TATCAGTGAGTCTGAGATTG+AGG + chr8.2:3716937-3716956 MS.gene042280:CDS 40.0%
! TGATTCTGGATACTGGCTAA+AGG + chr8.2:3717309-3717328 MS.gene042280:CDS 40.0%
! TGTCTTTCTAGAAAGACTCG+AGG + chr8.2:3718764-3718783 MS.gene042280:intron 40.0%
!! ATCACTCTTGTTGGCTTCAA+AGG + chr8.2:3718792-3718811 MS.gene042280:CDS 40.0%
!! GGAAGAAATGAGCACTGAAT+TGG + chr8.2:3719152-3719171 MS.gene042280:CDS 40.0%
AAATGCGGAAGCTTGATACC+TGG + chr8.2:3718066-3718085 MS.gene042280:CDS 45.0%
AACATCATGGGAAGAAGGAC+TGG + chr8.2:3717464-3717483 MS.gene042280:CDS 45.0%
AAGCAACTTAAGCGCAAGAG+AGG + chr8.2:3720102-3720121 MS.gene042280:CDS 45.0%
AAGGCTGTGTGCTTCATGTT+TGG + chr8.2:3717831-3717850 MS.gene042280:intron 45.0%
AATGGGAGACCTTGATGAGA+AGG + chr8.2:3719629-3719648 MS.gene042280:CDS 45.0%
AATTATGTCTGGCCATGGAC+AGG + chr8.2:3717256-3717275 MS.gene042280:CDS 45.0%
AGAACTTAAACGGCACACTC+AGG + chr8.2:3717011-3717030 MS.gene042280:CDS 45.0%
AGGATACCATCGACAAAGAC+AGG - chr8.2:3718266-3718285 None:intergenic 45.0%
AGTACCTTCGGAACAAAGGA+AGG + chr8.2:3717572-3717591 MS.gene042280:CDS 45.0%
ATAATTGTGGAGGGCCAATC+GGG + chr8.2:3717548-3717567 MS.gene042280:CDS 45.0%
CAGAGTGAATGATACCCATG+AGG + chr8.2:3719776-3719795 MS.gene042280:CDS 45.0%
CAGCATCCTACTTAAGGACA+TGG - chr8.2:3717728-3717747 None:intergenic 45.0%
CAGGCCAGTTCAGACATTTA+TGG + chr8.2:3717502-3717521 MS.gene042280:CDS 45.0%
CATGTCCTTAAGTAGGATGC+TGG + chr8.2:3717726-3717745 MS.gene042280:CDS 45.0%
CCAGAGCAATGATGAACTAC+AGG + chr8.2:3719239-3719258 MS.gene042280:CDS 45.0%
CCTGTAGTTCATCATTGCTC+TGG - chr8.2:3719242-3719261 None:intergenic 45.0%
CTCTCAGTCCAATTAGCAGA+TGG - chr8.2:3718387-3718406 None:intergenic 45.0%
CTGGAATTCAAAGGACATGC+AGG + chr8.2:3717483-3717502 MS.gene042280:CDS 45.0%
GAACTTCAAGGAACAGAGGA+AGG + chr8.2:3720038-3720057 MS.gene042280:CDS 45.0%
GACATCCAATGGTCTGTACT+TGG - chr8.2:3717341-3717360 None:intergenic 45.0%
GGTATGCTGTACATGAGCTA+TGG + chr8.2:3720016-3720035 MS.gene042280:CDS 45.0%
TCAAGAAGAAGCTGGGATGA+AGG + chr8.2:3719686-3719705 MS.gene042280:CDS 45.0%
TCAAGAGCAACCAAGGACAT+TGG - chr8.2:3718290-3718309 None:intergenic 45.0%
TCAGTCCAATTAGCAGATGG+TGG - chr8.2:3718384-3718403 None:intergenic 45.0%
TGATCAAGAGAGGCAGAAAC+TGG + chr8.2:3718121-3718140 MS.gene042280:CDS 45.0%
TGCTGAACCTTTGCTTACTC+CGG - chr8.2:3717101-3717120 None:intergenic 45.0%
TGGTATCCTACCAATGTCCT+TGG + chr8.2:3718277-3718296 MS.gene042280:intron 45.0%
! AGGCCTCTTCTTTTTCTCTC+TGG - chr8.2:3718996-3719015 None:intergenic 45.0%
! CGCAGGTTGAGAATTATGTC+TGG + chr8.2:3717245-3717264 MS.gene042280:CDS 45.0%
!! AGCATGGCACCCTTTTAAAG+TGG + chr8.2:3719752-3719771 MS.gene042280:CDS 45.0%
!! CAGGCTTGTTGAAGAGCAAA+AGG + chr8.2:3718843-3718862 MS.gene042280:CDS 45.0%
!! GAGGTGGTTTGCCTTTTGTT+TGG - chr8.2:3717134-3717153 None:intergenic 45.0%
!! TCCAATTAGCAGATGGTGGA+AGG - chr8.2:3718380-3718399 None:intergenic 45.0%
!!! CGGGCAGATGTGGTTTTTTA+TGG - chr8.2:3718636-3718655 None:intergenic 45.0%
!!! TTTTTAATCAAAAAAATAAA+AGG - chr8.2:3718598-3718617 None:intergenic 5.0%
!!! TTTTTTTAATTCTATATAAA+AGG + chr8.2:3719314-3719333 MS.gene042280:intron 5.0%
!!! TTTTTTTTTTAACAAATATA+TGG + chr8.2:3718481-3718500 MS.gene042280:intron 5.0%
AATACTTTGCCAGAGCGAGG+TGG - chr8.2:3717150-3717169 None:intergenic 50.0%
AGAGAGGCAGAAACTGGAAG+AGG + chr8.2:3718127-3718146 MS.gene042280:CDS 50.0%
AGATCCTTCGTACCTCCTCA+CGG - chr8.2:3718007-3718026 None:intergenic 50.0%
CATGCAACCGGAGTAAGCAA+AGG + chr8.2:3717091-3717110 MS.gene042280:CDS 50.0%
CCAAACAGAGCAAAGCTCCA+TGG - chr8.2:3719712-3719731 None:intergenic 50.0%
CCAAATACTTTGCCAGAGCG+AGG - chr8.2:3717153-3717172 None:intergenic 50.0%
CCATGGAGCTTTGCTCTGTT+TGG + chr8.2:3719709-3719728 MS.gene042280:CDS 50.0%
CTCCTCCAGCATCCTACTTA+AGG - chr8.2:3717734-3717753 None:intergenic 50.0%
CTTCATGGATGGTGACACTC+AGG + chr8.2:3717369-3717388 MS.gene042280:CDS 50.0%
GAAAACACATCGGGCAGATG+TGG - chr8.2:3718646-3718665 None:intergenic 50.0%
GAGCAACCAAGGACATTGGT+AGG - chr8.2:3718286-3718305 None:intergenic 50.0%
GCCTTCCACCATCTGCTAAT+TGG + chr8.2:3718376-3718395 MS.gene042280:intron 50.0%
GGTAGAGATGATCTTCACGC+AGG - chr8.2:3719447-3719466 None:intergenic 50.0%
GTACAGCATACCCACCACTT+GGG - chr8.2:3720008-3720027 None:intergenic 50.0%
GTCCTTAAGTAGGATGCTGG+AGG + chr8.2:3717729-3717748 MS.gene042280:CDS 50.0%
GTGGAAGGCCAACGAAAGTT+GGG - chr8.2:3718365-3718384 None:intergenic 50.0%
TAATTCTCAACCTGCGGTGC+AGG - chr8.2:3717241-3717260 None:intergenic 50.0%
TAATTGTGGAGGGCCAATCG+GGG + chr8.2:3717549-3717568 MS.gene042280:CDS 50.0%
TCAGCCTTCCTTTGTTCCGA+AGG - chr8.2:3717579-3717598 None:intergenic 50.0%
TGTACAGCATACCCACCACT+TGG - chr8.2:3720009-3720028 None:intergenic 50.0%
! CCTCGCTCTGGCAAAGTATT+TGG + chr8.2:3717150-3717169 MS.gene042280:CDS 50.0%
! TGAGGAGGTACGAAGGATCT+TGG + chr8.2:3718007-3718026 MS.gene042280:CDS 50.0%
!! TGCAGGTTGGTTGACAGCTT+CGG - chr8.2:3717224-3717243 None:intergenic 50.0%
AAAGGCAAACCACCTCGCTC+TGG + chr8.2:3717138-3717157 MS.gene042280:CDS 55.0%
AGAAGCTGGGATGAAGGCCA+TGG + chr8.2:3719692-3719711 MS.gene042280:CDS 55.0%
AGCAGACCAAATACCTCCCC+CGG + chr8.2:3717192-3717211 MS.gene042280:CDS 55.0%
CTCAGGTGCCCATATTGTGC+TGG + chr8.2:3717028-3717047 MS.gene042280:CDS 55.0%
CTGGCGCTCCTTGACAATGA+GGG - chr8.2:3719223-3719242 None:intergenic 55.0%
GATCCTTCGTACCTCCTCAC+GGG - chr8.2:3718006-3718025 None:intergenic 55.0%
GGAGCTTTGCTCTGTTTGGC+AGG + chr8.2:3719713-3719732 MS.gene042280:CDS 55.0%
GGATGCTGGAGGAGAAAGAC+AGG + chr8.2:3717740-3717759 MS.gene042280:CDS 55.0%
GGTGGAAGGCCAACGAAAGT+TGG - chr8.2:3718366-3718385 None:intergenic 55.0%
TATGCAGCGTAAAGCCCGTG+AGG + chr8.2:3717989-3718008 MS.gene042280:CDS 55.0%
TCTGGCGCTCCTTGACAATG+AGG - chr8.2:3719224-3719243 None:intergenic 55.0%
TTGACAGCTTCGGCCAAAGC+CGG - chr8.2:3717214-3717233 None:intergenic 55.0%
!! GGGGAGTACCTTCGGAACAA+AGG + chr8.2:3717568-3717587 MS.gene042280:CDS 55.0%
!! TTCCGAAGGTACTCCCCGAT+TGG - chr8.2:3717565-3717584 None:intergenic 55.0%
CCAAATACCTCCCCCGGCTT+TGG + chr8.2:3717198-3717217 MS.gene042280:CDS 60.0%
TCTCAACCTGCGGTGCAGGT+TGG - chr8.2:3717237-3717256 None:intergenic 60.0%
TGACAGCTTCGGCCAAAGCC+GGG - chr8.2:3717213-3717232 None:intergenic 60.0%
TGTCAACCAACCTGCACCGC+AGG + chr8.2:3717228-3717247 MS.gene042280:CDS 60.0%
! AAGCCCGTGAGGAGGTACGA+AGG + chr8.2:3718000-3718019 MS.gene042280:CDS 60.0%
!! CCAAAGCCGGGGGAGGTATT+TGG - chr8.2:3717201-3717220 None:intergenic 60.0%
!! GGCCAATCGGGGAGTACCTT+CGG + chr8.2:3717560-3717579 MS.gene042280:CDS 60.0%
ACAGCTTCGGCCAAAGCCGG+GGG - chr8.2:3717211-3717230 None:intergenic 65.0%
GACAGCTTCGGCCAAAGCCG+GGG - chr8.2:3717212-3717231 None:intergenic 65.0%
GCAGCGTAAAGCCCGTGAGG+AGG + chr8.2:3717992-3718011 MS.gene042280:CDS 65.0%
GCTTCGGCCAAAGCCGGGGG+AGG - chr8.2:3717208-3717227 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 3716908 3720128 3716908 ID=MS.gene042280
chr8.2 mRNA 3716908 3720128 3716908 ID=MS.gene042280.t1;Parent=MS.gene042280
chr8.2 exon 3716908 3717784 3716908 ID=MS.gene042280.t1.exon1;Parent=MS.gene042280.t1
chr8.2 CDS 3716908 3717784 3716908 ID=cds.MS.gene042280.t1;Parent=MS.gene042280.t1
chr8.2 exon 3717979 3718160 3717979 ID=MS.gene042280.t1.exon2;Parent=MS.gene042280.t1
chr8.2 CDS 3717979 3718160 3717979 ID=cds.MS.gene042280.t1;Parent=MS.gene042280.t1
chr8.2 exon 3718775 3718864 3718775 ID=MS.gene042280.t1.exon3;Parent=MS.gene042280.t1
chr8.2 CDS 3718775 3718864 3718775 ID=cds.MS.gene042280.t1;Parent=MS.gene042280.t1
chr8.2 exon 3718997 3719284 3718997 ID=MS.gene042280.t1.exon4;Parent=MS.gene042280.t1
chr8.2 CDS 3718997 3719284 3718997 ID=cds.MS.gene042280.t1;Parent=MS.gene042280.t1
chr8.2 exon 3719576 3719797 3719576 ID=MS.gene042280.t1.exon5;Parent=MS.gene042280.t1
chr8.2 CDS 3719576 3719797 3719576 ID=cds.MS.gene042280.t1;Parent=MS.gene042280.t1
chr8.2 exon 3719898 3720128 3719898 ID=MS.gene042280.t1.exon6;Parent=MS.gene042280.t1
chr8.2 CDS 3719898 3720128 3719898 ID=cds.MS.gene042280.t1;Parent=MS.gene042280.t1
Gene Sequence

>MS.gene042280

ATGGACTACAGCTCTGAAGAAGAGTCAGATATCAGTGAGTCTGAGATTGAGGAATACTCTGACAAACCTTATAAGGAGTTAAAGGATGGTAAATACAAAGTGAAGAACTTAAACGGCACACTCAGGTGCCCATATTGTGCTGGAAAAAAGAAGCAAGAGTTCAAATATAAGGATTTGATGCAACATGCAACCGGAGTAAGCAAAGGTTCAGCAAACAGAAACGCCAAACAAAAGGCAAACCACCTCGCTCTGGCAAAGTATTTGGAGACCGACCTAGTAAATGAAGCAGACCAAATACCTCCCCCGGCTTTGGCCGAAGCTGTCAACCAACCTGCACCGCAGGTTGAGAATTATGTCTGGCCATGGACAGGCATAATCGTTAACATTAAGAGCAACCTTAATGATTCTGGATACTGGCTAAAGGAATTTGCCAAGTACAGACCATTGGATGTCCATGTATTCTTCATGGATGGTGACACTCAGGCTGTAGTAGACTTCAACAATGACTGGAATGGTTTCATGAATGCAAGTGAATTTGAGAAATCCTTTGAAACTAAACATCATGGGAAGAAGGACTGGAATTCAAAGGACATGCAGGCCAGTTCAGACATTTATGGATGGGTTGCACGTGAAGATGATTATAATTGTGGAGGGCCAATCGGGGAGTACCTTCGGAACAAAGGAAGGCTGAGAACAATTTCAGATATTGTTCAAGAAGCATCTGAAAGCAGAAATAGCATTGTGGAAAACCTGGCCAATGAAATTGACATTACAAATGAAAACCTCAACAAAATGCAGTATAAGTATAATGAGAAGACCATGTCCTTAAGTAGGATGCTGGAGGAGAAAGACAGGCTTCACAATGCTTTTGTTGAAGGTTTGTATAATGTCTGTTAGAATCTGATTTTGCCTTATTGTATGTAAAGGCTGTGTGCTTCATGTTTGGCCATGTATGTTTTTCTATTCTTGTACGTTCATTGAAGCAGAAGAGTAGAAAAAAACTTGCATAGGTTTTAATGCTACAAAAATGTCTCTCTCACTTTTTTATTTTTATTTTTATTTTATTATTAGAGTCAAGGAGTATGCAGCGTAAAGCCCGTGAGGAGGTACGAAGGATCTTGGAAGAACAAGAAAAGTTGCGTAATGAATTGGATGAAAAAATGCGGAAGCTTGATACCTGGAGCAGAGATCTAAATAAGCGTGAGGTACTAACTGATCAAGAGAGGCAGAAACTGGAAGAGGACAAGAAAAAGGTATATTTTGCATTTTTCAATTAGTATATGCACATTTTAAATATTTTTTGTTGCTGGTCATAACTCATACGTTATCTACCATTGTCCTTGCAAAAAATTAGACCTGTCTTTGTCGATGGTATCCTACCAATGTCCTTGGTTGCTCTTGATTTGCATAACAAAGTGCTTTATTTTGATCCTATTCACTCCCTTTAAGTGAATCCCAACTTTCGTTGGCCTTCCACCATCTGCTAATTGGACTGAGAGTCTATATGCCAAAAGCTTTTGATTATTGTGAGGAAATATCAATGTATACTATATATATGGTTTTAGTTTTTTTTTTTTTTTTTTAACAAATATATGGTTTTAGTTTTAACTACCACATTTATGTTGAAATTTCGTTATAAAGATTTGTAGTTAAATATTAGTGTGCATTTTTTCATTTGAAAAATCATCCTTTTATTTTTTTGATTAAAAAGTCATCTTTCAAAATCCATAAAAAACCACATCTGCCCGATGTGTTTTCTTTCATCCCACTTTCTAATCTCTACTTGCTTGATGTGCCTCAAGACTTTAAAATCATCATCATGTATGTGTACTTCCTCAAGATTCAAATATTACTTCTGTCTTTCTAGAAAGACTCGAGGAATGAATCACTCTTGTTGGCTTCAAAGGAGCAGAAGATAGCTGATGAGAATGTCTTCAGGCTTGTTGAAGAGCAAAAGGTTTGCCCTCTATTTACTCTTGTTTATAAAAAGACAACACTACAACAGCGTATGCTTTTTTCTTTTAATCACTTATCAATGTTATCATCCATTGTGAATGTCTTCTGCTGATTTGGATTTCCAAACTACCAGAGAGAAAAAGAAGAGGCCTTAAACAAGATCCTTCAATTGGAAAAGCAACTAGATGCCAAACAAAAATTAGAAATGGAGATTGAGGAACTAAAAGGGAAATTGCAAGTTATGAAACATCTTGGAGATCAAGATGATGAAGCTATTAAGAAAAAAATGGAAGAAATGAGCACTGAATTGGCAGACAAAATAGAAAGTTTGGAGGATATGGAGTCTATGAATCAAACCCTCATTGTCAAGGAGCGCCAGAGCAATGATGAACTACAGGAAGCTCGTAAAGAGTTAATAATTGTATGATCTCATTTACTTTATCTCAATTTTTTTTTTAATTCTATATAAAAGGAAATGTTACTCGTACTTGTTGCATCCTTTTAACCTTTATCGTCTTGTATTCTTAACGATAACCAACTAACAAGTTGCATAGATTTCTTCAGGCTAAGTTATAAAGTACCTGCGTGAAGATCATCTCTACCTTTCTTTAGGAAATAAGAATTTTGATATTTTGTTGTTCTGCTGTGAATATATTGTGAAGACTAAAGTTGTTCCCCCTCATTTTTCTCTCTCTAATTTCTATTGTTTTAGGGGTTAAATGAAATGCTGAAGGGTAATAATAAAACTAATATTGGGACGAAAAGAATGGGAGACCTTGATGAGAAGGTTTTTGTGAAAGTCTGCAAGAAAAGATTTCTTTCTCAAGAAGAAGCTGGGATGAAGGCCATGGAGCTTTGCTCTGTTTGGCAGGAGAATGTGAAAAATTCAGCATGGCACCCTTTTAAAGTGGTCAGAGTGAATGATACCCATGAGGTATGTACTATAAAGACATGCTCTGTGTGTTTGAAGTAGTTATGCCTCAATTTAGAAATAGTATAATAATTAACACGGTAATACTGTTATATTGACACAGTCAGTTATAGATGAGGAAGATGAGAAATTAAAAAAGCTCAAGCAGGAATGGGGAGATGAGATATATTCAGCTGTTGAAACAGCCTTGAAAGAAGTAAATGAATACAACCCAAGTGGTGGGTATGCTGTACATGAGCTATGGAACTTCAAGGAACAGAGGAAGGCAACACTAAAAGAAGTTATTACTTATATCGTGGAACATATGAAGCAACTTAAGCGCAAGAGAGGATAG
Protein sequence

>MS.gene042280.t1

MDYSSEEESDISESEIEEYSDKPYKELKDGKYKVKNLNGTLRCPYCAGKKKQEFKYKDLMQHATGVSKGSANRNAKQKANHLALAKYLETDLVNEADQIPPPALAEAVNQPAPQVENYVWPWTGIIVNIKSNLNDSGYWLKEFAKYRPLDVHVFFMDGDTQAVVDFNNDWNGFMNASEFEKSFETKHHGKKDWNSKDMQASSDIYGWVAREDDYNCGGPIGEYLRNKGRLRTISDIVQEASESRNSIVENLANEIDITNENLNKMQYKYNEKTMSLSRMLEEKDRLHNAFVEESRSMQRKAREEVRRILEEQEKLRNELDEKMRKLDTWSRDLNKREVLTDQERQKLEEDKKKKDSRNESLLLASKEQKIADENVFRLVEEQKREKEEALNKILQLEKQLDAKQKLEMEIEELKGKLQVMKHLGDQDDEAIKKKMEEMSTELADKIESLEDMESMNQTLIVKERQSNDELQEARKELIIGLNEMLKGNNKTNIGTKRMGDLDEKVFVKVCKKRFLSQEEAGMKAMELCSVWQENVKNSAWHPFKVVRVNDTHESVIDEEDEKLKKLKQEWGDEIYSAVETALKEVNEYNPSGGYAVHELWNFKEQRKATLKEVITYIVEHMKQLKRKRG