Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62095.t1 | XP_024638822.1 | 96.7 | 629 | 21 | 0 | 1 | 629 | 1 | 629 | 5.2e-310 | 1073.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62095.t1 | Q9S9P3 | 56.0 | 634 | 265 | 7 | 5 | 628 | 4 | 633 | 4.3e-171 | 602.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62095.t1 | A0A396IH54 | 96.7 | 629 | 21 | 0 | 1 | 629 | 1 | 629 | 3.7e-310 | 1073.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene62095 | 0.855733 | 5.17E-62 | -1.69E-46 |
| MS.gene049824 | MS.gene62095 | 0.807676 | 4.50E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene62095 | 0.81253 | 4.05E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene62095 | 0.817157 | 3.81E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene62095 | 0.825793 | 3.86E-54 | -1.69E-46 |
| MS.gene053883 | MS.gene62095 | 0.800676 | 1.29E-48 | -1.69E-46 |
| MS.gene056050 | MS.gene62095 | 0.810551 | 1.09E-50 | -1.69E-46 |
| MS.gene059154 | MS.gene62095 | 0.832616 | 8.54E-56 | -1.69E-46 |
| MS.gene059625 | MS.gene62095 | 0.823808 | 1.13E-53 | -1.69E-46 |
| MS.gene060587 | MS.gene62095 | 0.806806 | 6.88E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene012587 | MS.gene62095 | PPI |
| MS.gene62095 | MS.gene52620 | PPI |
| MS.gene62095 | MS.gene035629 | PPI |
| MS.gene62095 | MS.gene064542 | PPI |
| MS.gene042282 | MS.gene62095 | PPI |
| MS.gene62095 | MS.gene042282 | PPI |
| MS.gene005189 | MS.gene62095 | PPI |
| MS.gene035570 | MS.gene62095 | PPI |
| MS.gene62095 | MS.gene035571 | PPI |
| MS.gene62095 | MS.gene91547 | PPI |
| MS.gene62095 | MS.gene044806 | PPI |
| MS.gene053226 | MS.gene62095 | PPI |
| MS.gene62095 | MS.gene73119 | PPI |
| MS.gene62095 | MS.gene012589 | PPI |
| MS.gene62095 | MS.gene012490 | PPI |
| MS.gene001928 | MS.gene62095 | PPI |
| MS.gene62095 | MS.gene88066 | PPI |
| MS.gene62095 | MS.gene86666 | PPI |
| MS.gene62095 | MS.gene012586 | PPI |
| MS.gene034251 | MS.gene62095 | PPI |
| MS.gene44056 | MS.gene62095 | PPI |
| MS.gene40741 | MS.gene62095 | PPI |
| MS.gene035805 | MS.gene62095 | PPI |
| MS.gene62095 | MS.gene000608 | PPI |
| MS.gene62095 | MS.gene042280 | PPI |
| MS.gene042281 | MS.gene62095 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62095.t1 | MTR_4g131350 | 98.410 | 629 | 10 | 0 | 1 | 629 | 54 | 682 | 0.0 | 1272 |
| MS.gene62095.t1 | MTR_4g125920 | 96.979 | 629 | 19 | 0 | 1 | 629 | 1 | 629 | 0.0 | 1250 |
| MS.gene62095.t1 | MTR_4g006760 | 86.020 | 608 | 81 | 4 | 22 | 629 | 22 | 625 | 0.0 | 1029 |
| MS.gene62095.t1 | MTR_4g131310 | 81.416 | 452 | 40 | 4 | 1 | 448 | 1 | 412 | 0.0 | 665 |
| MS.gene62095.t1 | MTR_4g131310 | 98.551 | 69 | 1 | 0 | 553 | 621 | 389 | 457 | 2.24e-36 | 142 |
| MS.gene62095.t1 | MTR_3g067815 | 42.924 | 643 | 344 | 9 | 1 | 626 | 1 | 637 | 7.64e-169 | 496 |
| MS.gene62095.t1 | MTR_5g079940 | 40.701 | 656 | 351 | 13 | 5 | 629 | 472 | 1120 | 1.16e-146 | 453 |
| MS.gene62095.t1 | MTR_5g079940 | 35.616 | 146 | 81 | 5 | 1 | 144 | 1 | 135 | 4.77e-16 | 82.8 |
| MS.gene62095.t1 | MTR_5g079940 | 41.346 | 104 | 51 | 4 | 1 | 103 | 117 | 211 | 4.37e-15 | 79.7 |
| MS.gene62095.t1 | MTR_5g079940 | 39.535 | 86 | 47 | 2 | 19 | 103 | 247 | 328 | 1.65e-13 | 74.7 |
| MS.gene62095.t1 | MTR_5g079940 | 37.255 | 102 | 60 | 3 | 4 | 101 | 352 | 453 | 6.65e-11 | 66.2 |
| MS.gene62095.t1 | MTR_2g097020 | 35.777 | 682 | 348 | 17 | 13 | 629 | 10 | 666 | 2.75e-108 | 341 |
| MS.gene62095.t1 | MTR_2g097010 | 36.527 | 668 | 345 | 16 | 26 | 628 | 23 | 676 | 5.83e-100 | 319 |
| MS.gene62095.t1 | MTR_4g046643 | 36.817 | 641 | 340 | 17 | 26 | 612 | 23 | 652 | 9.07e-100 | 320 |
| MS.gene62095.t1 | MTR_2g095400 | 36.128 | 656 | 349 | 20 | 13 | 628 | 10 | 635 | 6.56e-88 | 286 |
| MS.gene62095.t1 | MTR_4g126200 | 44.361 | 266 | 111 | 6 | 383 | 628 | 3 | 251 | 1.80e-59 | 200 |
| MS.gene62095.t1 | MTR_2g097000 | 38.583 | 381 | 191 | 9 | 268 | 618 | 10 | 377 | 2.04e-56 | 196 |
| MS.gene62095.t1 | MTR_3g067855 | 48.182 | 220 | 110 | 3 | 410 | 629 | 123 | 338 | 1.46e-54 | 190 |
| MS.gene62095.t1 | MTR_3g067845 | 40.711 | 253 | 144 | 4 | 378 | 629 | 4 | 251 | 1.37e-45 | 163 |
| MS.gene62095.t1 | MTR_3g067825 | 46.939 | 98 | 46 | 2 | 537 | 629 | 7 | 103 | 5.50e-20 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62095.t1 | AT1G15910 | 56.361 | 621 | 257 | 7 | 18 | 628 | 17 | 633 | 0.0 | 682 |
| MS.gene62095.t1 | AT4G00380 | 55.323 | 620 | 264 | 6 | 19 | 628 | 18 | 634 | 0.0 | 664 |
| MS.gene62095.t1 | AT4G00380 | 55.323 | 620 | 264 | 6 | 19 | 628 | 18 | 634 | 0.0 | 664 |
| MS.gene62095.t1 | AT4G00380 | 52.181 | 619 | 257 | 6 | 19 | 628 | 18 | 606 | 0.0 | 617 |
| MS.gene62095.t1 | AT1G80790 | 53.140 | 621 | 276 | 7 | 19 | 629 | 19 | 634 | 0.0 | 607 |
| MS.gene62095.t1 | AT1G80790 | 53.140 | 621 | 276 | 7 | 19 | 629 | 19 | 634 | 0.0 | 607 |
| MS.gene62095.t1 | AT3G48670 | 40.630 | 635 | 346 | 10 | 16 | 629 | 21 | 645 | 1.71e-149 | 447 |
| MS.gene62095.t1 | AT3G48670 | 40.630 | 635 | 346 | 10 | 16 | 629 | 21 | 645 | 1.71e-149 | 447 |
| MS.gene62095.t1 | AT3G48670 | 40.630 | 635 | 346 | 10 | 16 | 629 | 21 | 645 | 1.71e-149 | 447 |
| MS.gene62095.t1 | AT1G80790 | 51.876 | 453 | 205 | 6 | 19 | 461 | 19 | 468 | 1.78e-148 | 438 |
| MS.gene62095.t1 | AT3G12550 | 36.364 | 638 | 369 | 12 | 16 | 625 | 5 | 633 | 4.76e-117 | 363 |
| MS.gene62095.t1 | AT3G12550 | 36.207 | 638 | 371 | 11 | 16 | 625 | 5 | 634 | 5.45e-117 | 363 |
| MS.gene62095.t1 | AT3G12550 | 36.207 | 638 | 371 | 11 | 16 | 625 | 5 | 634 | 5.45e-117 | 363 |
| MS.gene62095.t1 | AT3G12550 | 36.207 | 638 | 371 | 11 | 16 | 625 | 5 | 634 | 5.45e-117 | 363 |
| MS.gene62095.t1 | AT1G13790 | 39.768 | 518 | 282 | 8 | 118 | 618 | 219 | 723 | 1.59e-103 | 330 |
| MS.gene62095.t1 | AT1G13790 | 37.662 | 77 | 48 | 0 | 12 | 88 | 3 | 79 | 4.01e-12 | 69.7 |
| MS.gene62095.t1 | AT1G13790 | 39.768 | 518 | 282 | 8 | 118 | 618 | 219 | 723 | 1.59e-103 | 330 |
| MS.gene62095.t1 | AT1G13790 | 37.662 | 77 | 48 | 0 | 12 | 88 | 3 | 79 | 4.01e-12 | 69.7 |
| MS.gene62095.t1 | AT3G12550 | 33.510 | 567 | 342 | 11 | 16 | 556 | 5 | 562 | 1.25e-89 | 290 |
| MS.gene62095.t1 | AT5G59390 | 35.436 | 539 | 307 | 13 | 114 | 628 | 30 | 551 | 3.37e-83 | 272 |
| MS.gene62095.t1 | AT5G59390 | 35.436 | 539 | 307 | 13 | 114 | 628 | 30 | 551 | 3.37e-83 | 272 |
| MS.gene62095.t1 | AT5G59390 | 35.436 | 539 | 307 | 13 | 114 | 628 | 30 | 551 | 3.37e-83 | 272 |
| MS.gene62095.t1 | AT5G59390 | 35.110 | 544 | 307 | 14 | 114 | 628 | 30 | 556 | 5.10e-81 | 266 |
| MS.gene62095.t1 | AT5G59390 | 35.110 | 544 | 307 | 14 | 114 | 628 | 30 | 556 | 5.10e-81 | 266 |
| MS.gene62095.t1 | AT4G01180 | 33.996 | 553 | 300 | 14 | 114 | 628 | 28 | 553 | 2.75e-75 | 251 |
| MS.gene62095.t1 | AT4G01780 | 31.631 | 509 | 229 | 10 | 123 | 629 | 79 | 470 | 4.35e-65 | 221 |
| MS.gene62095.t1 | AT3G29375 | 44.335 | 203 | 105 | 2 | 426 | 628 | 32 | 226 | 2.71e-47 | 166 |
| MS.gene62095.t1 | AT3G29375 | 44.335 | 203 | 105 | 2 | 426 | 628 | 155 | 349 | 5.20e-46 | 167 |
| MS.gene62095.t1 | AT2G16490 | 45.946 | 74 | 40 | 0 | 555 | 628 | 75 | 148 | 8.44e-17 | 79.3 |
| MS.gene62095.t1 | AT3G29375 | 38.843 | 121 | 66 | 2 | 426 | 546 | 32 | 144 | 9.18e-17 | 79.0 |
Find 144 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCACTCTGACCACTTTAAA+AGG | 0.163774 | 8.2:-3751113 | None:intergenic |
| CAATTGAAGGATCTTGTTTA+AGG | 0.184121 | 8.2:-3750364 | None:intergenic |
| CCTCGCTCTGGCAAAGTATT+TGG | 0.196923 | 8.2:+3748502 | MS.gene62095:CDS |
| GGTAATAATAAAACTAATAT+TGG | 0.209949 | 8.2:+3750948 | MS.gene62095:CDS |
| CCATCCTTTAACTCCTTATA+AGG | 0.231876 | 8.2:-3748326 | None:intergenic |
| AAGAGCAACCTTAATGATTC+TGG | 0.249360 | 8.2:+3748647 | MS.gene62095:CDS |
| CAAACCTTATAAGGAGTTAA+AGG | 0.267169 | 8.2:+3748322 | MS.gene62095:CDS |
| GCCAGTATCCAGAATCATTA+AGG | 0.269275 | 8.2:-3748655 | None:intergenic |
| ATGGAGATTGAGGAACTAAA+AGG | 0.270338 | 8.2:+3750420 | MS.gene62095:CDS |
| AATAGAAAGTTTGGAGGATA+TGG | 0.275154 | 8.2:+3750533 | MS.gene62095:CDS |
| CCATGGAGCTTTGCTCTGTT+TGG | 0.285950 | 8.2:+3751060 | MS.gene62095:CDS |
| CAGGCCAGTTCAGACATTTA+TGG | 0.299736 | 8.2:+3748854 | MS.gene62095:CDS |
| GAAGCAAGAGTTCAAATATA+AGG | 0.303067 | 8.2:+3748409 | MS.gene62095:CDS |
| GGCAGACAAAATAGAAAGTT+TGG | 0.306256 | 8.2:+3750524 | MS.gene62095:CDS |
| ATACTCTGACAAACCTTATA+AGG | 0.314776 | 8.2:+3748313 | MS.gene62095:CDS |
| ATTTGTAATGTCAATTTCAT+TGG | 0.353548 | 8.2:-3749014 | None:intergenic |
| AGAAAAGTTGCGTAATGAAT+TGG | 0.355859 | 8.2:+3749389 | MS.gene62095:CDS |
| GTATTCATTTACTTCTTTCA+AGG | 0.362185 | 8.2:-3751331 | None:intergenic |
| TTTGGTCTGCTTCATTTACT+AGG | 0.363332 | 8.2:-3748532 | None:intergenic |
| CTCCTCCAGCATCCTACTTA+AGG | 0.373591 | 8.2:-3749083 | None:intergenic |
| TGCAGGTTGGTTGACAGCTT+CGG | 0.383198 | 8.2:-3748573 | None:intergenic |
| ACTGGAAGAGGACAAGAAAA+AGG | 0.383259 | 8.2:+3749491 | MS.gene62095:CDS |
| TGATCAAGAGAGGCAGAAAC+TGG | 0.385206 | 8.2:+3749473 | MS.gene62095:CDS |
| ACCTTAATGATTCTGGATAC+TGG | 0.387551 | 8.2:+3748654 | MS.gene62095:CDS |
| TTGCAAGTTATGAAACATCT+TGG | 0.395938 | 8.2:+3750447 | MS.gene62095:CDS |
| GAGGAATGAATCACTCTTGT+TGG | 0.397647 | 8.2:+3750134 | MS.gene62095:CDS |
| GGCCAATCGGGGAGTACCTT+CGG | 0.401670 | 8.2:+3748912 | MS.gene62095:CDS |
| CTTAAACAAGATCCTTCAAT+TGG | 0.401905 | 8.2:+3750365 | MS.gene62095:CDS |
| GGAAGAAATGAGCACTGAAT+TGG | 0.405229 | 8.2:+3750503 | MS.gene62095:CDS |
| TTGACAGCTTCGGCCAAAGC+CGG | 0.413440 | 8.2:-3748563 | None:intergenic |
| GGATGTCCATGTATTCTTCA+TGG | 0.417376 | 8.2:+3748706 | MS.gene62095:CDS |
| GGAGCTTTGCTCTGTTTGGC+AGG | 0.418461 | 8.2:+3751064 | MS.gene62095:CDS |
| ATCACTCTTGTTGGCTTCAA+AGG | 0.419125 | 8.2:+3750143 | MS.gene62095:CDS |
| CAGGCTTGTTGAAGAGCAAA+AGG | 0.422308 | 8.2:+3750194 | MS.gene62095:CDS |
| TTTCTTTCTCAAGAAGAAGC+TGG | 0.423912 | 8.2:+3751029 | MS.gene62095:CDS |
| GTAATAATAAAACTAATATT+GGG | 0.428154 | 8.2:+3750949 | MS.gene62095:CDS |
| GTCTGCTTCATTTACTAGGT+CGG | 0.430421 | 8.2:-3748528 | None:intergenic |
| TGACAGCTTCGGCCAAAGCC+GGG | 0.430548 | 8.2:-3748562 | None:intergenic |
| TATAATTGTGGAGGGCCAAT+CGG | 0.436933 | 8.2:+3748899 | MS.gene62095:CDS |
| TACAAAGTGAAGAACTTAAA+CGG | 0.437308 | 8.2:+3748353 | MS.gene62095:CDS |
| CCCATGATGTTTAGTTTCAA+AGG | 0.437487 | 8.2:-3748804 | None:intergenic |
| TGAGGAGGTACGAAGGATCT+TGG | 0.441330 | 8.2:+3749359 | MS.gene62095:CDS |
| AAACAGAAACGCCAAACAAA+AGG | 0.444045 | 8.2:+3748472 | MS.gene62095:CDS |
| TAATTCTCAACCTGCGGTGC+AGG | 0.450934 | 8.2:-3748590 | None:intergenic |
| CCTGTAGTTCATCATTGCTC+TGG | 0.453560 | 8.2:-3750590 | None:intergenic |
| TTCTTTCTCAAGAAGAAGCT+GGG | 0.457631 | 8.2:+3751030 | MS.gene62095:CDS |
| ATAATTGTGGAGGGCCAATC+GGG | 0.458752 | 8.2:+3748900 | MS.gene62095:CDS |
| TGGAGATTGAGGAACTAAAA+GGG | 0.462021 | 8.2:+3750421 | MS.gene62095:CDS |
| GACATCCAATGGTCTGTACT+TGG | 0.464959 | 8.2:-3748690 | None:intergenic |
| TAGCTGATGAGAATGTCTTC+AGG | 0.469727 | 8.2:+3750175 | MS.gene62095:CDS |
| TCCTTTGAAACTAAACATCA+TGG | 0.472800 | 8.2:+3748803 | MS.gene62095:CDS |
| TAATGTCAATTTCATTGGCC+AGG | 0.476378 | 8.2:-3749009 | None:intergenic |
| TTCCGAAGGTACTCCCCGAT+TGG | 0.479350 | 8.2:-3748914 | None:intergenic |
| TGCTGAACCTTTGCTTACTC+CGG | 0.483792 | 8.2:-3748450 | None:intergenic |
| CCATCCATAAATGTCTGAAC+TGG | 0.485326 | 8.2:-3748858 | None:intergenic |
| TAATATTGGGACGAAAAGAA+TGG | 0.490015 | 8.2:+3750962 | MS.gene62095:CDS |
| CACCATCCATGAAGAATACA+TGG | 0.492568 | 8.2:-3748712 | None:intergenic |
| AAAGGCAAACCACCTCGCTC+TGG | 0.499352 | 8.2:+3748490 | MS.gene62095:CDS |
| GATTTGATGCAACATGCAAC+CGG | 0.499938 | 8.2:+3748431 | MS.gene62095:CDS |
| AAAATTAGAAATGGAGATTG+AGG | 0.501255 | 8.2:+3750410 | MS.gene62095:CDS |
| AACATCATGGGAAGAAGGAC+TGG | 0.503730 | 8.2:+3748816 | MS.gene62095:CDS |
| TCAGCCTTCCTTTGTTCCGA+AGG | 0.504609 | 8.2:-3748928 | None:intergenic |
| GGATGCTGGAGGAGAAAGAC+AGG | 0.505595 | 8.2:+3749092 | MS.gene62095:CDS |
| CAGTTCAGACATTTATGGAT+GGG | 0.508021 | 8.2:+3748859 | MS.gene62095:CDS |
| CGCAGGTTGAGAATTATGTC+TGG | 0.508239 | 8.2:+3748597 | MS.gene62095:CDS |
| TGTCAACCAACCTGCACCGC+AGG | 0.510588 | 8.2:+3748580 | MS.gene62095:CDS |
| TAGTAGACTTCAACAATGAC+TGG | 0.511067 | 8.2:+3748747 | MS.gene62095:CDS |
| CATGTCCTTAAGTAGGATGC+TGG | 0.511615 | 8.2:+3749078 | MS.gene62095:CDS |
| TCACTCTGACCACTTTAAAA+GGG | 0.512768 | 8.2:-3751112 | None:intergenic |
| TATCAGTGAGTCTGAGATTG+AGG | 0.513014 | 8.2:+3748289 | MS.gene62095:CDS |
| AATTATGTCTGGCCATGGAC+AGG | 0.519380 | 8.2:+3748608 | MS.gene62095:CDS |
| CTCAGGTGCCCATATTGTGC+TGG | 0.519768 | 8.2:+3748380 | MS.gene62095:CDS |
| AATGGGAGACCTTGATGAGA+AGG | 0.520493 | 8.2:+3750980 | MS.gene62095:CDS |
| TCAAGAAGAAGCTGGGATGA+AGG | 0.521240 | 8.2:+3751037 | MS.gene62095:CDS |
| ACATGAGCTATGGAACTTCA+AGG | 0.521861 | 8.2:+3751377 | MS.gene62095:CDS |
| GACAGCTTCGGCCAAAGCCG+GGG | 0.523172 | 8.2:-3748561 | None:intergenic |
| CCAGTTCAGACATTTATGGA+TGG | 0.523268 | 8.2:+3748858 | MS.gene62095:CDS |
| CTGGCGCTCCTTGACAATGA+GGG | 0.524882 | 8.2:-3750571 | None:intergenic |
| AATATTGGGACGAAAAGAAT+GGG | 0.525422 | 8.2:+3750963 | MS.gene62095:CDS |
| CCAGAGCAATGATGAACTAC+AGG | 0.526461 | 8.2:+3750590 | MS.gene62095:CDS |
| CTTATTTAGATCTCTGCTCC+AGG | 0.528367 | 8.2:-3749436 | None:intergenic |
| AGATCCTTCGTACCTCCTCA+CGG | 0.530263 | 8.2:-3749356 | None:intergenic |
| AACTAAACATCATGGGAAGA+AGG | 0.530602 | 8.2:+3748811 | MS.gene62095:CDS |
| GGGGTTAAATGAAATGCTGA+AGG | 0.533320 | 8.2:+3750926 | MS.gene62095:intron |
| AAATAGCATTGTGGAAAACC+TGG | 0.534545 | 8.2:+3748991 | MS.gene62095:CDS |
| ATTTGCCAAGTACAGACCAT+TGG | 0.540423 | 8.2:+3748685 | MS.gene62095:CDS |
| CGTGAAGATGATTATAATTG+TGG | 0.540581 | 8.2:+3748887 | MS.gene62095:CDS |
| TCTCAACCTGCGGTGCAGGT+TGG | 0.544080 | 8.2:-3748586 | None:intergenic |
| TGATTCTGGATACTGGCTAA+AGG | 0.547223 | 8.2:+3748661 | MS.gene62095:CDS |
| CTTCATGGATGGTGACACTC+AGG | 0.551198 | 8.2:+3748721 | MS.gene62095:CDS |
| AAATGCGGAAGCTTGATACC+TGG | 0.551489 | 8.2:+3749418 | MS.gene62095:CDS |
| AGAAGACCATGTCCTTAAGT+AGG | 0.555180 | 8.2:+3749071 | MS.gene62095:CDS |
| AGAAGCTGGGATGAAGGCCA+TGG | 0.556908 | 8.2:+3751043 | MS.gene62095:CDS |
| TCTGGCGCTCCTTGACAATG+AGG | 0.559354 | 8.2:-3750572 | None:intergenic |
| TTGAGAATTATGTCTGGCCA+TGG | 0.559406 | 8.2:+3748603 | MS.gene62095:CDS |
| TGTACAGCATACCCACCACT+TGG | 0.569747 | 8.2:-3751357 | None:intergenic |
| GATCCTTCGTACCTCCTCAC+GGG | 0.574071 | 8.2:-3749355 | None:intergenic |
| AGCAGACCAAATACCTCCCC+CGG | 0.574685 | 8.2:+3748544 | MS.gene62095:CDS |
| AATGAATACAACCCAAGTGG+TGG | 0.575225 | 8.2:+3751345 | MS.gene62095:CDS |
| GGTATGCTGTACATGAGCTA+TGG | 0.579873 | 8.2:+3751367 | MS.gene62095:CDS |
| ACTTAAGCGCAAGAGAGGAT+AGG | 0.584806 | 8.2:+3751458 | MS.gene62095:CDS |
| GAAGATGATTATAATTGTGG+AGG | 0.585641 | 8.2:+3748890 | MS.gene62095:CDS |
| AGAAGTTATTACTTATATCG+TGG | 0.586754 | 8.2:+3751422 | MS.gene62095:CDS |
| AGTACCTTCGGAACAAAGGA+AGG | 0.587192 | 8.2:+3748924 | MS.gene62095:CDS |
| CCAAACAGAGCAAAGCTCCA+TGG | 0.587327 | 8.2:-3751060 | None:intergenic |
| AGAGAGGCAGAAACTGGAAG+AGG | 0.587763 | 8.2:+3749479 | MS.gene62095:CDS |
| CTGGAATTCAAAGGACATGC+AGG | 0.587852 | 8.2:+3748835 | MS.gene62095:CDS |
| GACTTCAACAATGACTGGAA+TGG | 0.589478 | 8.2:+3748752 | MS.gene62095:CDS |
| GAATCAAACCCTCATTGTCA+AGG | 0.592874 | 8.2:+3750563 | MS.gene62095:CDS |
| AAGAATACATGGACATCCAA+TGG | 0.592903 | 8.2:-3748701 | None:intergenic |
| AGACAAAATAGAAAGTTTGG+AGG | 0.593505 | 8.2:+3750527 | MS.gene62095:CDS |
| TTAACGATTATGCCTGTCCA+TGG | 0.594850 | 8.2:-3748620 | None:intergenic |
| CTTTATAGTACATACCTCAT+GGG | 0.595496 | 8.2:-3751141 | None:intergenic |
| GAACTTCAAGGAACAGAGGA+AGG | 0.596171 | 8.2:+3751389 | MS.gene62095:CDS |
| GTCCATGTATTCTTCATGGA+TGG | 0.597803 | 8.2:+3748710 | MS.gene62095:CDS |
| CCTTATAAGGAGTTAAAGGA+TGG | 0.598931 | 8.2:+3748326 | MS.gene62095:CDS |
| CAGCATCCTACTTAAGGACA+TGG | 0.599280 | 8.2:-3749077 | None:intergenic |
| ACAGCTTCGGCCAAAGCCGG+GGG | 0.602001 | 8.2:-3748560 | None:intergenic |
| CCTTTGAAACTAAACATCAT+GGG | 0.603923 | 8.2:+3748804 | MS.gene62095:CDS |
| GGGGAGTACCTTCGGAACAA+AGG | 0.609491 | 8.2:+3748920 | MS.gene62095:CDS |
| AAGCAACTTAAGCGCAAGAG+AGG | 0.619700 | 8.2:+3751453 | MS.gene62095:CDS |
| AAGATGATTATAATTGTGGA+GGG | 0.627167 | 8.2:+3748891 | MS.gene62095:CDS |
| GAAGAAGGACTGGAATTCAA+AGG | 0.628414 | 8.2:+3748826 | MS.gene62095:CDS |
| CCAAATACTTTGCCAGAGCG+AGG | 0.628747 | 8.2:-3748502 | None:intergenic |
| ATGAATACAACCCAAGTGGT+GGG | 0.633174 | 8.2:+3751346 | MS.gene62095:CDS |
| AGAACTTAAACGGCACACTC+AGG | 0.633398 | 8.2:+3748363 | MS.gene62095:CDS |
| CAGACATAATTCTCAACCTG+CGG | 0.633547 | 8.2:-3748596 | None:intergenic |
| CATGCAACCGGAGTAAGCAA+AGG | 0.637786 | 8.2:+3748443 | MS.gene62095:CDS |
| GGGTTAAATGAAATGCTGAA+GGG | 0.639837 | 8.2:+3750927 | MS.gene62095:CDS |
| AAGCCCGTGAGGAGGTACGA+AGG | 0.640443 | 8.2:+3749352 | MS.gene62095:CDS |
| GACACAGTCAGTTATAGATG+AGG | 0.652703 | 8.2:+3751242 | MS.gene62095:intron |
| GTCCTTAAGTAGGATGCTGG+AGG | 0.661594 | 8.2:+3749081 | MS.gene62095:CDS |
| AGGTACTAACTGATCAAGAG+AGG | 0.662179 | 8.2:+3749463 | MS.gene62095:CDS |
| GTACAGCATACCCACCACTT+GGG | 0.664374 | 8.2:-3751356 | None:intergenic |
| CAGAGATCTAAATAAGCGTG+AGG | 0.673270 | 8.2:+3749443 | MS.gene62095:CDS |
| TGAAAGCAGAAATAGCATTG+TGG | 0.673917 | 8.2:+3748982 | MS.gene62095:CDS |
| AATACTTTGCCAGAGCGAGG+TGG | 0.673965 | 8.2:-3748499 | None:intergenic |
| GTAAATGAATACAACCCAAG+TGG | 0.677594 | 8.2:+3751342 | MS.gene62095:CDS |
| TAATTGTGGAGGGCCAATCG+GGG | 0.679230 | 8.2:+3748901 | MS.gene62095:CDS |
| GCAGCGTAAAGCCCGTGAGG+AGG | 0.680045 | 8.2:+3749344 | MS.gene62095:CDS |
| TATGGAACTTCAAGGAACAG+AGG | 0.683112 | 8.2:+3751385 | MS.gene62095:CDS |
| TGTCTTTCTAGAAAGACTCG+AGG | 0.689901 | 8.2:+3750115 | MS.gene62095:intron |
| CAGAGTGAATGATACCCATG+AGG | 0.719794 | 8.2:+3751127 | MS.gene62095:CDS |
| TATGCAGCGTAAAGCCCGTG+AGG | 0.720834 | 8.2:+3749341 | MS.gene62095:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAGTATAATAATTAACA+CGG | + | chr8.2:3751204-3751223 | MS.gene62095:intron | 10.0% |
| !! | GTAATAATAAAACTAATATT+GGG | + | chr8.2:3750949-3750968 | MS.gene62095:CDS | 10.0% |
| !! | ATCAATGTATACTATATATA+TGG | + | chr8.2:3749796-3749815 | MS.gene62095:intron | 15.0% |
| !! | GGTAATAATAAAACTAATAT+TGG | + | chr8.2:3750948-3750967 | MS.gene62095:CDS | 15.0% |
| !!! | ATTATACTATTTCTAAATTG+AGG | - | chr8.2:3751196-3751215 | None:intergenic | 15.0% |
| !!! | TTATTTTATTATTAGAGTCA+AGG | + | chr8.2:3749316-3749335 | MS.gene62095:intron | 15.0% |
| !!! | TTTTAAATATTTTTTGTTGC+TGG | + | chr8.2:3749547-3749566 | MS.gene62095:intron | 15.0% |
| !! | ATTTGTAATGTCAATTTCAT+TGG | - | chr8.2:3749017-3749036 | None:intergenic | 20.0% |
| !! | TATAAACAAGAGTAAATAGA+GGG | - | chr8.2:3750224-3750243 | None:intergenic | 20.0% |
| !! | TGAAGCTATTAAGAAAAAAA+TGG | + | chr8.2:3750482-3750501 | MS.gene62095:CDS | 20.0% |
| !! | TTATAAACAAGAGTAAATAG+AGG | - | chr8.2:3750225-3750244 | None:intergenic | 20.0% |
| !!! | AATTCTTATTTCCTAAAGAA+AGG | - | chr8.2:3750819-3750838 | None:intergenic | 20.0% |
| !!! | CTCTAATTTCTATTGTTTTA+GGG | + | chr8.2:3750906-3750925 | MS.gene62095:intron | 20.0% |
| !!! | TCTAATTTCTATTGTTTTAG+GGG | + | chr8.2:3750907-3750926 | MS.gene62095:intron | 20.0% |
| !!! | TCTCTAATTTCTATTGTTTT+AGG | + | chr8.2:3750905-3750924 | MS.gene62095:intron | 20.0% |
| ! | AAAATTAGAAATGGAGATTG+AGG | + | chr8.2:3750410-3750429 | MS.gene62095:CDS | 25.0% |
| ! | AAATTAGAGAGAGAAAAATG+AGG | - | chr8.2:3750895-3750914 | None:intergenic | 25.0% |
| ! | AAGATGATTATAATTGTGGA+GGG | + | chr8.2:3748891-3748910 | MS.gene62095:CDS | 25.0% |
| ! | AATTAGAGAGAGAAAAATGA+GGG | - | chr8.2:3750894-3750913 | None:intergenic | 25.0% |
| ! | ACGAAATTTCAACATAAATG+TGG | - | chr8.2:3749873-3749892 | None:intergenic | 25.0% |
| ! | AGAAGTTATTACTTATATCG+TGG | + | chr8.2:3751422-3751441 | MS.gene62095:CDS | 25.0% |
| ! | ATGAATTGGATGAAAAAATG+CGG | + | chr8.2:3749403-3749422 | MS.gene62095:CDS | 25.0% |
| ! | CAAGAATAGAAAAACATACA+TGG | - | chr8.2:3749209-3749228 | None:intergenic | 25.0% |
| ! | GAAGTAATATTTGAATCTTG+AGG | - | chr8.2:3750095-3750114 | None:intergenic | 25.0% |
| ! | GTATTCATTTACTTCTTTCA+AGG | - | chr8.2:3751334-3751353 | None:intergenic | 25.0% |
| ! | TACAAAGTGAAGAACTTAAA+CGG | + | chr8.2:3748353-3748372 | MS.gene62095:CDS | 25.0% |
| ! | TGCCAAACAAAAATTAGAAA+TGG | + | chr8.2:3750401-3750420 | MS.gene62095:CDS | 25.0% |
| ! | TTAAGAATACAAGACGATAA+AGG | - | chr8.2:3750723-3750742 | None:intergenic | 25.0% |
| !! | CTCCATTTCTAATTTTTGTT+TGG | - | chr8.2:3750406-3750425 | None:intergenic | 25.0% |
| !! | TCACAATAATCAAAAGCTTT+TGG | - | chr8.2:3749770-3749789 | None:intergenic | 25.0% |
| !!! | AAAAGCTTTTGATTATTGTG+AGG | + | chr8.2:3749769-3749788 | MS.gene62095:intron | 25.0% |
| !!! | ATGATGATTTTAAAGTCTTG+AGG | - | chr8.2:3750057-3750076 | None:intergenic | 25.0% |
| !!! | TTTTGCCTTATTGTATGTAA+AGG | + | chr8.2:3749164-3749183 | MS.gene62095:intron | 25.0% |
| AAAGTTGGGATTCACTTAAA+GGG | - | chr8.2:3749703-3749722 | None:intergenic | 30.0% | |
| AATAGAAAGTTTGGAGGATA+TGG | + | chr8.2:3750533-3750552 | MS.gene62095:CDS | 30.0% | |
| AATATTGGGACGAAAAGAAT+GGG | + | chr8.2:3750963-3750982 | MS.gene62095:CDS | 30.0% | |
| ACAAGACGATAAAGGTTAAA+AGG | - | chr8.2:3750715-3750734 | None:intergenic | 30.0% | |
| AGAAAAGTTGCGTAATGAAT+TGG | + | chr8.2:3749389-3749408 | MS.gene62095:CDS | 30.0% | |
| AGAATGTGAAAAATTCAGCA+TGG | + | chr8.2:3751087-3751106 | MS.gene62095:CDS | 30.0% | |
| AGACAAAATAGAAAGTTTGG+AGG | + | chr8.2:3750527-3750546 | MS.gene62095:CDS | 30.0% | |
| ATACTCTGACAAACCTTATA+AGG | + | chr8.2:3748313-3748332 | MS.gene62095:CDS | 30.0% | |
| ATTAGAGAGAGAAAAATGAG+GGG | - | chr8.2:3750893-3750912 | None:intergenic | 30.0% | |
| CAAACCTTATAAGGAGTTAA+AGG | + | chr8.2:3748322-3748341 | MS.gene62095:CDS | 30.0% | |
| CGTGAAGATGATTATAATTG+TGG | + | chr8.2:3748887-3748906 | MS.gene62095:CDS | 30.0% | |
| CTTAAACAAGATCCTTCAAT+TGG | + | chr8.2:3750365-3750384 | MS.gene62095:CDS | 30.0% | |
| CTTTATAGTACATACCTCAT+GGG | - | chr8.2:3751144-3751163 | None:intergenic | 30.0% | |
| GAAATTAAAAAAGCTCAAGC+AGG | + | chr8.2:3751272-3751291 | MS.gene62095:CDS | 30.0% | |
| GAAGATGATTATAATTGTGG+AGG | + | chr8.2:3748890-3748909 | MS.gene62095:CDS | 30.0% | |
| GAAGCAAGAGTTCAAATATA+AGG | + | chr8.2:3748409-3748428 | MS.gene62095:CDS | 30.0% | |
| GAGTAGAAAAAAACTTGCAT+AGG | + | chr8.2:3749248-3749267 | MS.gene62095:intron | 30.0% | |
| TAATATTGGGACGAAAAGAA+TGG | + | chr8.2:3750962-3750981 | MS.gene62095:CDS | 30.0% | |
| TCTTTATAGTACATACCTCA+TGG | - | chr8.2:3751145-3751164 | None:intergenic | 30.0% | |
| TTGCAAGTTATGAAACATCT+TGG | + | chr8.2:3750447-3750466 | MS.gene62095:CDS | 30.0% | |
| ! | ACTTATACTGCATTTTGTTG+AGG | - | chr8.2:3749045-3749064 | None:intergenic | 30.0% |
| ! | CAATTGAAGGATCTTGTTTA+AGG | - | chr8.2:3750367-3750386 | None:intergenic | 30.0% |
| !! | AATCTATGCAACTTGTTAGT+TGG | - | chr8.2:3750752-3750771 | None:intergenic | 30.0% |
| !! | CCTTTGAAACTAAACATCAT+GGG | + | chr8.2:3748804-3748823 | MS.gene62095:CDS | 30.0% |
| !! | TCCTTTGAAACTAAACATCA+TGG | + | chr8.2:3748803-3748822 | MS.gene62095:CDS | 30.0% |
| !!! | CTAATTTTTTGCAAGGACAA+TGG | - | chr8.2:3749594-3749613 | None:intergenic | 30.0% |
| !!! | TCTTTTTTCCAGCACAATAT+GGG | - | chr8.2:3748391-3748410 | None:intergenic | 30.0% |
| !!! | TTCTTTTTTCCAGCACAATA+TGG | - | chr8.2:3748392-3748411 | None:intergenic | 30.0% |
| AAAAAAGCTCAAGCAGGAAT+GGG | + | chr8.2:3751278-3751297 | MS.gene62095:CDS | 35.0% | |
| AAACAGAAACGCCAAACAAA+AGG | + | chr8.2:3748472-3748491 | MS.gene62095:CDS | 35.0% | |
| AAATAGCATTGTGGAAAACC+TGG | + | chr8.2:3748991-3749010 | MS.gene62095:CDS | 35.0% | |
| AACTAAACATCATGGGAAGA+AGG | + | chr8.2:3748811-3748830 | MS.gene62095:CDS | 35.0% | |
| AAGAATACATGGACATCCAA+TGG | - | chr8.2:3748704-3748723 | None:intergenic | 35.0% | |
| AAGAGCAACCTTAATGATTC+TGG | + | chr8.2:3748647-3748666 | MS.gene62095:CDS | 35.0% | |
| ACCTTAATGATTCTGGATAC+TGG | + | chr8.2:3748654-3748673 | MS.gene62095:CDS | 35.0% | |
| AGCAAGTAGAGATTAGAAAG+TGG | - | chr8.2:3750027-3750046 | None:intergenic | 35.0% | |
| ATGGAGATTGAGGAACTAAA+AGG | + | chr8.2:3750420-3750439 | MS.gene62095:CDS | 35.0% | |
| CAAGTTGCATAGATTTCTTC+AGG | + | chr8.2:3750757-3750776 | MS.gene62095:intron | 35.0% | |
| CACAGCCTTTACATACAATA+AGG | - | chr8.2:3749172-3749191 | None:intergenic | 35.0% | |
| CAGTTCAGACATTTATGGAT+GGG | + | chr8.2:3748859-3748878 | MS.gene62095:CDS | 35.0% | |
| CCATCCTTTAACTCCTTATA+AGG | - | chr8.2:3748329-3748348 | None:intergenic | 35.0% | |
| CCTTATAAGGAGTTAAAGGA+TGG | + | chr8.2:3748326-3748345 | MS.gene62095:CDS | 35.0% | |
| GAAAGTTGGGATTCACTTAA+AGG | - | chr8.2:3749704-3749723 | None:intergenic | 35.0% | |
| GATCATCTCTACCTTTCTTT+AGG | + | chr8.2:3750805-3750824 | MS.gene62095:intron | 35.0% | |
| GCAAGTAGAGATTAGAAAGT+GGG | - | chr8.2:3750026-3750045 | None:intergenic | 35.0% | |
| GGCAGACAAAATAGAAAGTT+TGG | + | chr8.2:3750524-3750543 | MS.gene62095:CDS | 35.0% | |
| GGGTTAAATGAAATGCTGAA+GGG | + | chr8.2:3750927-3750946 | MS.gene62095:CDS | 35.0% | |
| GTAAATGAATACAACCCAAG+TGG | + | chr8.2:3751342-3751361 | MS.gene62095:CDS | 35.0% | |
| TAAAAAAGCTCAAGCAGGAA+TGG | + | chr8.2:3751277-3751296 | MS.gene62095:CDS | 35.0% | |
| TAATGTCAATTTCATTGGCC+AGG | - | chr8.2:3749012-3749031 | None:intergenic | 35.0% | |
| TAGTAGACTTCAACAATGAC+TGG | + | chr8.2:3748747-3748766 | MS.gene62095:CDS | 35.0% | |
| TCACAAAAACCTTCTCATCA+AGG | - | chr8.2:3750992-3751011 | None:intergenic | 35.0% | |
| TGAAAGCAGAAATAGCATTG+TGG | + | chr8.2:3748982-3749001 | MS.gene62095:CDS | 35.0% | |
| TGGAGATTGAGGAACTAAAA+GGG | + | chr8.2:3750421-3750440 | MS.gene62095:CDS | 35.0% | |
| TGGGATGAAAGAAAACACAT+CGG | - | chr8.2:3750007-3750026 | None:intergenic | 35.0% | |
| TTAGAGAGAGAAAAATGAGG+GGG | - | chr8.2:3750892-3750911 | None:intergenic | 35.0% | |
| TTCACTCTGACCACTTTAAA+AGG | - | chr8.2:3751116-3751135 | None:intergenic | 35.0% | |
| TTCACTTAAAGGGAGTGAAT+AGG | - | chr8.2:3749693-3749712 | None:intergenic | 35.0% | |
| TTCTTTCTCAAGAAGAAGCT+GGG | + | chr8.2:3751030-3751049 | MS.gene62095:CDS | 35.0% | |
| TTTCTTTCTCAAGAAGAAGC+TGG | + | chr8.2:3751029-3751048 | MS.gene62095:CDS | 35.0% | |
| TTTGGTCTGCTTCATTTACT+AGG | - | chr8.2:3748535-3748554 | None:intergenic | 35.0% | |
| ! | CCCATGATGTTTAGTTTCAA+AGG | - | chr8.2:3748807-3748826 | None:intergenic | 35.0% |
| ! | CTTCACAATGCTTTTGTTGA+AGG | + | chr8.2:3749115-3749134 | MS.gene62095:CDS | 35.0% |
| ! | TCACTCTGACCACTTTAAAA+GGG | - | chr8.2:3751115-3751134 | None:intergenic | 35.0% |
| ! | TCTTTTTCTCTCTGGTAGTT+TGG | - | chr8.2:3750339-3750358 | None:intergenic | 35.0% |
| !!! | CTAGTTGCTTTTCCAATTGA+AGG | - | chr8.2:3750380-3750399 | None:intergenic | 35.0% |
| !!! | GACAGGTCTAATTTTTTGCA+AGG | - | chr8.2:3749601-3749620 | None:intergenic | 35.0% |
| AAAAAGCTCAAGCAGGAATG+GGG | + | chr8.2:3751279-3751298 | MS.gene62095:CDS | 40.0% | |
| AAGTGAATCCCAACTTTCGT+TGG | + | chr8.2:3749706-3749725 | MS.gene62095:intron | 40.0% | |
| AATGAATACAACCCAAGTGG+TGG | + | chr8.2:3751345-3751364 | MS.gene62095:CDS | 40.0% | |
| ACATGAGCTATGGAACTTCA+AGG | + | chr8.2:3751377-3751396 | MS.gene62095:CDS | 40.0% | |
| ACTGGAAGAGGACAAGAAAA+AGG | + | chr8.2:3749491-3749510 | MS.gene62095:CDS | 40.0% | |
| AGAAGACCATGTCCTTAAGT+AGG | + | chr8.2:3749071-3749090 | MS.gene62095:CDS | 40.0% | |
| AGGTACTAACTGATCAAGAG+AGG | + | chr8.2:3749463-3749482 | MS.gene62095:CDS | 40.0% | |
| ATGAATACAACCCAAGTGGT+GGG | + | chr8.2:3751346-3751365 | MS.gene62095:CDS | 40.0% | |
| ATGCAAATCAAGAGCAACCA+AGG | - | chr8.2:3749649-3749668 | None:intergenic | 40.0% | |
| ATTAGACCTGTCTTTGTCGA+TGG | + | chr8.2:3749609-3749628 | MS.gene62095:intron | 40.0% | |
| ATTTGCCAAGTACAGACCAT+TGG | + | chr8.2:3748685-3748704 | MS.gene62095:CDS | 40.0% | |
| CACCATCCATGAAGAATACA+TGG | - | chr8.2:3748715-3748734 | None:intergenic | 40.0% | |
| CAGACATAATTCTCAACCTG+CGG | - | chr8.2:3748599-3748618 | None:intergenic | 40.0% | |
| CAGAGATCTAAATAAGCGTG+AGG | + | chr8.2:3749443-3749462 | MS.gene62095:CDS | 40.0% | |
| CCAGTTCAGACATTTATGGA+TGG | + | chr8.2:3748858-3748877 | MS.gene62095:CDS | 40.0% | |
| CCATCCATAAATGTCTGAAC+TGG | - | chr8.2:3748861-3748880 | None:intergenic | 40.0% | |
| CTACCAGAGAGAAAAAGAAG+AGG | + | chr8.2:3750341-3750360 | MS.gene62095:intron | 40.0% | |
| CTTATTTAGATCTCTGCTCC+AGG | - | chr8.2:3749439-3749458 | None:intergenic | 40.0% | |
| GAAGAAGGACTGGAATTCAA+AGG | + | chr8.2:3748826-3748845 | MS.gene62095:CDS | 40.0% | |
| GAATCAAACCCTCATTGTCA+AGG | + | chr8.2:3750563-3750582 | MS.gene62095:CDS | 40.0% | |
| GACACAGTCAGTTATAGATG+AGG | + | chr8.2:3751242-3751261 | MS.gene62095:intron | 40.0% | |
| GACTTCAACAATGACTGGAA+TGG | + | chr8.2:3748752-3748771 | MS.gene62095:CDS | 40.0% | |
| GAGGAATGAATCACTCTTGT+TGG | + | chr8.2:3750134-3750153 | MS.gene62095:CDS | 40.0% | |
| GATTTGATGCAACATGCAAC+CGG | + | chr8.2:3748431-3748450 | MS.gene62095:CDS | 40.0% | |
| GCCAGTATCCAGAATCATTA+AGG | - | chr8.2:3748658-3748677 | None:intergenic | 40.0% | |
| GGATGTCCATGTATTCTTCA+TGG | + | chr8.2:3748706-3748725 | MS.gene62095:CDS | 40.0% | |
| GGGATGAAAGAAAACACATC+GGG | - | chr8.2:3750006-3750025 | None:intergenic | 40.0% | |
| GGGGTTAAATGAAATGCTGA+AGG | + | chr8.2:3750926-3750945 | MS.gene62095:intron | 40.0% | |
| GTCCATGTATTCTTCATGGA+TGG | + | chr8.2:3748710-3748729 | MS.gene62095:CDS | 40.0% | |
| GTCTGCTTCATTTACTAGGT+CGG | - | chr8.2:3748531-3748550 | None:intergenic | 40.0% | |
| TAGCTGATGAGAATGTCTTC+AGG | + | chr8.2:3750175-3750194 | MS.gene62095:CDS | 40.0% | |
| TATAATTGTGGAGGGCCAAT+CGG | + | chr8.2:3748899-3748918 | MS.gene62095:CDS | 40.0% | |
| TATGGAACTTCAAGGAACAG+AGG | + | chr8.2:3751385-3751404 | MS.gene62095:CDS | 40.0% | |
| TCAGCAGAAGACATTCACAA+TGG | - | chr8.2:3750307-3750326 | None:intergenic | 40.0% | |
| TTAACGATTATGCCTGTCCA+TGG | - | chr8.2:3748623-3748642 | None:intergenic | 40.0% | |
| TTGAGAATTATGTCTGGCCA+TGG | + | chr8.2:3748603-3748622 | MS.gene62095:CDS | 40.0% | |
| ! | GTGAATGTCTTCTGCTGATT+TGG | + | chr8.2:3750309-3750328 | MS.gene62095:intron | 40.0% |
| ! | TATCAGTGAGTCTGAGATTG+AGG | + | chr8.2:3748289-3748308 | MS.gene62095:CDS | 40.0% |
| ! | TGATTCTGGATACTGGCTAA+AGG | + | chr8.2:3748661-3748680 | MS.gene62095:CDS | 40.0% |
| ! | TGTCTTTCTAGAAAGACTCG+AGG | + | chr8.2:3750115-3750134 | MS.gene62095:intron | 40.0% |
| !! | ATCACTCTTGTTGGCTTCAA+AGG | + | chr8.2:3750143-3750162 | MS.gene62095:CDS | 40.0% |
| !! | GGAAGAAATGAGCACTGAAT+TGG | + | chr8.2:3750503-3750522 | MS.gene62095:CDS | 40.0% |
| AAATGCGGAAGCTTGATACC+TGG | + | chr8.2:3749418-3749437 | MS.gene62095:CDS | 45.0% | |
| AACATCATGGGAAGAAGGAC+TGG | + | chr8.2:3748816-3748835 | MS.gene62095:CDS | 45.0% | |
| AAGCAACTTAAGCGCAAGAG+AGG | + | chr8.2:3751453-3751472 | MS.gene62095:CDS | 45.0% | |
| AAGGCTGTGTGCTTCATGTT+TGG | + | chr8.2:3749183-3749202 | MS.gene62095:intron | 45.0% | |
| AATGGGAGACCTTGATGAGA+AGG | + | chr8.2:3750980-3750999 | MS.gene62095:CDS | 45.0% | |
| AATTATGTCTGGCCATGGAC+AGG | + | chr8.2:3748608-3748627 | MS.gene62095:CDS | 45.0% | |
| AGAACTTAAACGGCACACTC+AGG | + | chr8.2:3748363-3748382 | MS.gene62095:CDS | 45.0% | |
| AGGATACCATCGACAAAGAC+AGG | - | chr8.2:3749618-3749637 | None:intergenic | 45.0% | |
| AGTACCTTCGGAACAAAGGA+AGG | + | chr8.2:3748924-3748943 | MS.gene62095:CDS | 45.0% | |
| ATAATTGTGGAGGGCCAATC+GGG | + | chr8.2:3748900-3748919 | MS.gene62095:CDS | 45.0% | |
| CAGAGTGAATGATACCCATG+AGG | + | chr8.2:3751127-3751146 | MS.gene62095:CDS | 45.0% | |
| CAGCATCCTACTTAAGGACA+TGG | - | chr8.2:3749080-3749099 | None:intergenic | 45.0% | |
| CAGGCCAGTTCAGACATTTA+TGG | + | chr8.2:3748854-3748873 | MS.gene62095:CDS | 45.0% | |
| CATGTCCTTAAGTAGGATGC+TGG | + | chr8.2:3749078-3749097 | MS.gene62095:CDS | 45.0% | |
| CCAGAGCAATGATGAACTAC+AGG | + | chr8.2:3750590-3750609 | MS.gene62095:CDS | 45.0% | |
| CCTGTAGTTCATCATTGCTC+TGG | - | chr8.2:3750593-3750612 | None:intergenic | 45.0% | |
| CTCTCAGTCCAATTAGCAGA+TGG | - | chr8.2:3749739-3749758 | None:intergenic | 45.0% | |
| CTGGAATTCAAAGGACATGC+AGG | + | chr8.2:3748835-3748854 | MS.gene62095:CDS | 45.0% | |
| GAACTTCAAGGAACAGAGGA+AGG | + | chr8.2:3751389-3751408 | MS.gene62095:CDS | 45.0% | |
| GACATCCAATGGTCTGTACT+TGG | - | chr8.2:3748693-3748712 | None:intergenic | 45.0% | |
| GGTATGCTGTACATGAGCTA+TGG | + | chr8.2:3751367-3751386 | MS.gene62095:CDS | 45.0% | |
| TCAAGAAGAAGCTGGGATGA+AGG | + | chr8.2:3751037-3751056 | MS.gene62095:CDS | 45.0% | |
| TCAAGAGCAACCAAGGACAT+TGG | - | chr8.2:3749642-3749661 | None:intergenic | 45.0% | |
| TCAGTCCAATTAGCAGATGG+TGG | - | chr8.2:3749736-3749755 | None:intergenic | 45.0% | |
| TGATCAAGAGAGGCAGAAAC+TGG | + | chr8.2:3749473-3749492 | MS.gene62095:CDS | 45.0% | |
| TGCTGAACCTTTGCTTACTC+CGG | - | chr8.2:3748453-3748472 | None:intergenic | 45.0% | |
| TGGTATCCTACCAATGTCCT+TGG | + | chr8.2:3749629-3749648 | MS.gene62095:intron | 45.0% | |
| ! | AGGCCTCTTCTTTTTCTCTC+TGG | - | chr8.2:3750347-3750366 | None:intergenic | 45.0% |
| ! | CGCAGGTTGAGAATTATGTC+TGG | + | chr8.2:3748597-3748616 | MS.gene62095:CDS | 45.0% |
| !! | AGCATGGCACCCTTTTAAAG+TGG | + | chr8.2:3751103-3751122 | MS.gene62095:CDS | 45.0% |
| !! | CAGGCTTGTTGAAGAGCAAA+AGG | + | chr8.2:3750194-3750213 | MS.gene62095:CDS | 45.0% |
| !! | GAGGTGGTTTGCCTTTTGTT+TGG | - | chr8.2:3748486-3748505 | None:intergenic | 45.0% |
| !! | TCCAATTAGCAGATGGTGGA+AGG | - | chr8.2:3749732-3749751 | None:intergenic | 45.0% |
| !!! | CGGGCAGATGTGGTTTTTTA+TGG | - | chr8.2:3749987-3750006 | None:intergenic | 45.0% |
| !!! | TTTTTAATCAAAAAAATAAA+AGG | - | chr8.2:3749949-3749968 | None:intergenic | 5.0% |
| !!! | TTTTTTTAATTCTATATAAA+AGG | + | chr8.2:3750665-3750684 | MS.gene62095:intron | 5.0% |
| !!! | TTTTTTTTTTAACAAATATA+TGG | + | chr8.2:3749832-3749851 | MS.gene62095:intron | 5.0% |
| AATACTTTGCCAGAGCGAGG+TGG | - | chr8.2:3748502-3748521 | None:intergenic | 50.0% | |
| AGAGAGGCAGAAACTGGAAG+AGG | + | chr8.2:3749479-3749498 | MS.gene62095:CDS | 50.0% | |
| AGATCCTTCGTACCTCCTCA+CGG | - | chr8.2:3749359-3749378 | None:intergenic | 50.0% | |
| CATGCAACCGGAGTAAGCAA+AGG | + | chr8.2:3748443-3748462 | MS.gene62095:CDS | 50.0% | |
| CCAAACAGAGCAAAGCTCCA+TGG | - | chr8.2:3751063-3751082 | None:intergenic | 50.0% | |
| CCAAATACTTTGCCAGAGCG+AGG | - | chr8.2:3748505-3748524 | None:intergenic | 50.0% | |
| CCATGGAGCTTTGCTCTGTT+TGG | + | chr8.2:3751060-3751079 | MS.gene62095:CDS | 50.0% | |
| CTCCTCCAGCATCCTACTTA+AGG | - | chr8.2:3749086-3749105 | None:intergenic | 50.0% | |
| CTTCATGGATGGTGACACTC+AGG | + | chr8.2:3748721-3748740 | MS.gene62095:CDS | 50.0% | |
| GAAAACACATCGGGCAGATG+TGG | - | chr8.2:3749997-3750016 | None:intergenic | 50.0% | |
| GAGCAACCAAGGACATTGGT+AGG | - | chr8.2:3749638-3749657 | None:intergenic | 50.0% | |
| GCCTTCCACCATCTGCTAAT+TGG | + | chr8.2:3749728-3749747 | MS.gene62095:intron | 50.0% | |
| GGTAGAGATGATCTTCACGC+AGG | - | chr8.2:3750798-3750817 | None:intergenic | 50.0% | |
| GTACAGCATACCCACCACTT+GGG | - | chr8.2:3751359-3751378 | None:intergenic | 50.0% | |
| GTCCTTAAGTAGGATGCTGG+AGG | + | chr8.2:3749081-3749100 | MS.gene62095:CDS | 50.0% | |
| GTGGAAGGCCAACGAAAGTT+GGG | - | chr8.2:3749717-3749736 | None:intergenic | 50.0% | |
| TAATTCTCAACCTGCGGTGC+AGG | - | chr8.2:3748593-3748612 | None:intergenic | 50.0% | |
| TAATTGTGGAGGGCCAATCG+GGG | + | chr8.2:3748901-3748920 | MS.gene62095:CDS | 50.0% | |
| TCAGCCTTCCTTTGTTCCGA+AGG | - | chr8.2:3748931-3748950 | None:intergenic | 50.0% | |
| TGTACAGCATACCCACCACT+TGG | - | chr8.2:3751360-3751379 | None:intergenic | 50.0% | |
| ! | CCTCGCTCTGGCAAAGTATT+TGG | + | chr8.2:3748502-3748521 | MS.gene62095:CDS | 50.0% |
| ! | TGAGGAGGTACGAAGGATCT+TGG | + | chr8.2:3749359-3749378 | MS.gene62095:CDS | 50.0% |
| !! | TGCAGGTTGGTTGACAGCTT+CGG | - | chr8.2:3748576-3748595 | None:intergenic | 50.0% |
| AAAGGCAAACCACCTCGCTC+TGG | + | chr8.2:3748490-3748509 | MS.gene62095:CDS | 55.0% | |
| AGAAGCTGGGATGAAGGCCA+TGG | + | chr8.2:3751043-3751062 | MS.gene62095:CDS | 55.0% | |
| AGCAGACCAAATACCTCCCC+CGG | + | chr8.2:3748544-3748563 | MS.gene62095:CDS | 55.0% | |
| CTCAGGTGCCCATATTGTGC+TGG | + | chr8.2:3748380-3748399 | MS.gene62095:CDS | 55.0% | |
| CTGGCGCTCCTTGACAATGA+GGG | - | chr8.2:3750574-3750593 | None:intergenic | 55.0% | |
| GATCCTTCGTACCTCCTCAC+GGG | - | chr8.2:3749358-3749377 | None:intergenic | 55.0% | |
| GGAGCTTTGCTCTGTTTGGC+AGG | + | chr8.2:3751064-3751083 | MS.gene62095:CDS | 55.0% | |
| GGATGCTGGAGGAGAAAGAC+AGG | + | chr8.2:3749092-3749111 | MS.gene62095:CDS | 55.0% | |
| GGTGGAAGGCCAACGAAAGT+TGG | - | chr8.2:3749718-3749737 | None:intergenic | 55.0% | |
| TATGCAGCGTAAAGCCCGTG+AGG | + | chr8.2:3749341-3749360 | MS.gene62095:CDS | 55.0% | |
| TCTGGCGCTCCTTGACAATG+AGG | - | chr8.2:3750575-3750594 | None:intergenic | 55.0% | |
| TTGACAGCTTCGGCCAAAGC+CGG | - | chr8.2:3748566-3748585 | None:intergenic | 55.0% | |
| !! | GGGGAGTACCTTCGGAACAA+AGG | + | chr8.2:3748920-3748939 | MS.gene62095:CDS | 55.0% |
| !! | TTCCGAAGGTACTCCCCGAT+TGG | - | chr8.2:3748917-3748936 | None:intergenic | 55.0% |
| CCAAATACCTCCCCCGGCTT+TGG | + | chr8.2:3748550-3748569 | MS.gene62095:CDS | 60.0% | |
| TCTCAACCTGCGGTGCAGGT+TGG | - | chr8.2:3748589-3748608 | None:intergenic | 60.0% | |
| TGACAGCTTCGGCCAAAGCC+GGG | - | chr8.2:3748565-3748584 | None:intergenic | 60.0% | |
| TGTCAACCAACCTGCACCGC+AGG | + | chr8.2:3748580-3748599 | MS.gene62095:CDS | 60.0% | |
| ! | AAGCCCGTGAGGAGGTACGA+AGG | + | chr8.2:3749352-3749371 | MS.gene62095:CDS | 60.0% |
| !! | CCAAAGCCGGGGGAGGTATT+TGG | - | chr8.2:3748553-3748572 | None:intergenic | 60.0% |
| !! | GGCCAATCGGGGAGTACCTT+CGG | + | chr8.2:3748912-3748931 | MS.gene62095:CDS | 60.0% |
| ACAGCTTCGGCCAAAGCCGG+GGG | - | chr8.2:3748563-3748582 | None:intergenic | 65.0% | |
| GACAGCTTCGGCCAAAGCCG+GGG | - | chr8.2:3748564-3748583 | None:intergenic | 65.0% | |
| GCAGCGTAAAGCCCGTGAGG+AGG | + | chr8.2:3749344-3749363 | MS.gene62095:CDS | 65.0% | |
| GCTTCGGCCAAAGCCGGGGG+AGG | - | chr8.2:3748560-3748579 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 3748260 | 3751479 | 3748260 | ID=MS.gene62095 |
| chr8.2 | mRNA | 3748260 | 3751479 | 3748260 | ID=MS.gene62095.t1;Parent=MS.gene62095 |
| chr8.2 | exon | 3748260 | 3749136 | 3748260 | ID=MS.gene62095.t1.exon1;Parent=MS.gene62095.t1 |
| chr8.2 | CDS | 3748260 | 3749136 | 3748260 | ID=cds.MS.gene62095.t1;Parent=MS.gene62095.t1 |
| chr8.2 | exon | 3749331 | 3749512 | 3749331 | ID=MS.gene62095.t1.exon2;Parent=MS.gene62095.t1 |
| chr8.2 | CDS | 3749331 | 3749512 | 3749331 | ID=cds.MS.gene62095.t1;Parent=MS.gene62095.t1 |
| chr8.2 | exon | 3750126 | 3750215 | 3750126 | ID=MS.gene62095.t1.exon3;Parent=MS.gene62095.t1 |
| chr8.2 | CDS | 3750126 | 3750215 | 3750126 | ID=cds.MS.gene62095.t1;Parent=MS.gene62095.t1 |
| chr8.2 | exon | 3750348 | 3750635 | 3750348 | ID=MS.gene62095.t1.exon4;Parent=MS.gene62095.t1 |
| chr8.2 | CDS | 3750348 | 3750635 | 3750348 | ID=cds.MS.gene62095.t1;Parent=MS.gene62095.t1 |
| chr8.2 | exon | 3750927 | 3751148 | 3750927 | ID=MS.gene62095.t1.exon5;Parent=MS.gene62095.t1 |
| chr8.2 | CDS | 3750927 | 3751148 | 3750927 | ID=cds.MS.gene62095.t1;Parent=MS.gene62095.t1 |
| chr8.2 | exon | 3751249 | 3751479 | 3751249 | ID=MS.gene62095.t1.exon6;Parent=MS.gene62095.t1 |
| chr8.2 | CDS | 3751249 | 3751479 | 3751249 | ID=cds.MS.gene62095.t1;Parent=MS.gene62095.t1 |
| Gene Sequence |
| Protein sequence |
