AlfalfaGEDB | MS.gene012752

M. sativa cultivar XinJiangDaYe / MS.gene012752

KEGG: K11644
GO: GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:1903506 GO:2000112 GO:2001141
PFAM: PF02671.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene012752.t1	RHN65062.1	92.4	251	19	0	1	251	1	251	1.30E-130	475.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene012752.t1	Q9SRH9	40.3	149	81	2	11	151	56	204	1.6e-20	101.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene012752.t1	G7JLN1	92.4	251	19	0	1	251	1	251	9.5e-131	475.7

TFs/TRs:

Gene ID	Type	Classification
MS.gene012752.t1	TR	Others

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene91330	MS.gene012752	PPI
MS.gene60770	MS.gene012752	PPI
MS.gene012752	MS.gene71600	PPI
MS.gene80087	MS.gene012752	PPI
MS.gene012752	MS.gene99643	PPI
MS.gene012752	MS.gene43439	PPI
MS.gene80089	MS.gene012752	PPI
MS.gene012752	MS.gene91422	PPI
MS.gene80088	MS.gene012752	PPI
MS.gene91421	MS.gene012752	PPI
MS.gene012752	MS.gene93863	PPI
MS.gene012752	MS.gene93862	PPI
MS.gene012752	MS.gene95089	PPI
MS.gene85574	MS.gene012752	PPI
MS.gene012752	MS.gene93864	PPI
MS.gene99644	MS.gene012752	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene012752.t1	MTR_4g133300	92.430	251	19	0	1	251	1	251	9.52e-174	478
MS.gene012752.t1	MTR_4g133470	91.633	251	21	0	1	251	1	251	8.18e-172	473
MS.gene012752.t1	MTR_2g097830	95.413	109	5	0	1	109	59	167	2.50e-73	221
MS.gene012752.t1	MTR_2g097830	34.286	140	81	4	56	192	36	167	3.30e-12	63.5
MS.gene012752.t1	MTR_2g097830	45.588	68	34	1	175	242	73	137	5.53e-11	60.1
MS.gene012752.t1	MTR_1g104960	42.767	159	88	1	89	244	13	171	1.33e-34	122
MS.gene012752.t1	MTR_1g104960	42.857	175	88	4	1	164	1	174	8.67e-32	115
MS.gene012752.t1	MTR_3g006150	45.161	155	79	3	10	158	6	160	5.18e-33	118
MS.gene012752.t1	MTR_3g006150	45.513	156	79	3	89	241	8	160	7.43e-30	110
MS.gene012752.t1	MTR_3g006065	46.405	153	76	3	12	158	8	160	7.89e-33	118
MS.gene012752.t1	MTR_3g006065	42.105	171	93	3	83	250	2	169	4.96e-29	108
MS.gene012752.t1	MTR_3g006065	46.575	73	35	1	12	80	90	162	2.01e-13	67.0
MS.gene012752.t1	MTR_3g006185	45.614	171	85	4	83	245	2	172	9.25e-33	117
MS.gene012752.t1	MTR_3g006185	40.361	166	85	3	12	163	8	173	2.92e-27	103
MS.gene012752.t1	MTR_3g006125	42.328	189	98	5	66	245	68	254	9.61e-33	120
MS.gene012752.t1	MTR_3g006125	43.056	144	71	2	25	157	106	249	1.74e-27	106
MS.gene012752.t1	MTR_7g013380	33.191	235	146	5	20	244	26	259	1.98e-32	120
MS.gene012752.t1	MTR_7g013380	34.783	161	98	4	90	244	14	173	4.81e-20	87.4
MS.gene012752.t1	MTR_1g105955	41.772	158	78	2	88	240	15	163	1.56e-30	112
MS.gene012752.t1	MTR_1g105955	44.595	148	72	3	13	154	17	160	5.69e-28	105
MS.gene012752.t1	MTR_1g105955	47.222	72	35	1	8	76	91	162	3.18e-13	66.6
MS.gene012752.t1	MTR_3g006105	43.114	167	86	4	83	240	2	168	7.22e-29	108
MS.gene012752.t1	MTR_3g006105	40.964	166	82	5	12	162	8	172	4.00e-28	106
MS.gene012752.t1	MTR_1g104980	40.789	152	78	2	93	244	3	142	4.21e-27	103
MS.gene012752.t1	MTR_1g104980	41.259	143	75	2	25	167	15	148	2.76e-23	93.2
MS.gene012752.t1	MTR_5g036670	40.000	160	87	2	2	152	33	192	1.03e-25	105
MS.gene012752.t1	MTR_5g036670	35.185	162	100	2	79	235	31	192	2.15e-22	96.3
MS.gene012752.t1	MTR_5g036670	49.398	83	40	1	164	244	33	115	8.42e-17	80.1
MS.gene012752.t1	MTR_1g109550	40.141	142	80	2	1	140	5	143	1.09e-25	98.6
MS.gene012752.t1	MTR_1g109550	36.296	135	73	4	89	220	16	140	6.34e-17	75.5
MS.gene012752.t1	MTR_1g109550	47.692	65	33	1	175	239	19	82	2.19e-13	65.9
MS.gene012752.t1	MTR_8g062700	39.766	171	86	3	11	164	41	211	3.48e-25	104
MS.gene012752.t1	MTR_8g062700	35.256	156	98	2	83	235	36	191	1.39e-20	91.3
MS.gene012752.t1	MTR_8g062700	52.564	78	35	1	167	242	35	112	1.61e-16	79.3
MS.gene012752.t1	MTR_8g062700	39.766	171	86	3	11	164	41	211	3.51e-25	104
MS.gene012752.t1	MTR_8g062700	35.256	156	98	2	83	235	36	191	1.40e-20	91.3
MS.gene012752.t1	MTR_8g062700	52.564	78	35	1	167	242	35	112	1.61e-16	79.3
MS.gene012752.t1	MTR_6g008970	39.735	151	82	2	11	152	62	212	5.16e-23	98.2
MS.gene012752.t1	MTR_6g008970	34.177	158	101	1	81	235	55	212	2.05e-19	87.8
MS.gene012752.t1	MTR_6g008970	51.948	77	35	1	167	241	56	132	3.98e-15	75.1
MS.gene012752.t1	MTR_6g008995	39.189	148	83	2	12	152	37	184	3.95e-21	92.0
MS.gene012752.t1	MTR_6g008995	35.484	155	95	3	84	235	32	184	2.53e-18	84.0
MS.gene012752.t1	MTR_6g008995	59.701	67	27	0	175	241	40	106	3.41e-16	77.8
MS.gene012752.t1	MTR_7g013410	34.921	126	81	1	27	151	16	141	2.87e-19	81.6
MS.gene012752.t1	MTR_7g013410	28.873	142	99	1	93	234	2	141	8.75e-13	64.3
MS.gene012752.t1	MTR_7g013410	44.776	67	37	0	176	242	2	68	6.54e-12	62.0
MS.gene012752.t1	MTR_6g008995	38.889	126	73	1	31	152	2	127	1.80e-18	84.3
MS.gene012752.t1	MTR_6g008995	32.812	128	81	3	111	235	2	127	3.07e-11	63.2
MS.gene012752.t1	MTR_6g008995	64.583	48	17	0	194	241	2	49	4.10e-11	62.8
MS.gene012752.t1	MTR_1g105960	53.030	66	31	0	175	240	4	69	3.41e-16	72.8
MS.gene012752.t1	MTR_1g105960	39.130	115	47	2	13	124	2	96	2.53e-15	70.5
MS.gene012752.t1	MTR_1g105960	36.134	119	53	1	90	208	2	97	4.01e-14	67.0
MS.gene012752.t1	MTR_1g105010	49.315	73	37	0	85	157	12	84	4.00e-15	70.1
MS.gene012752.t1	MTR_1g105010	40.244	82	46	1	162	240	3	84	9.06e-13	63.5
MS.gene012752.t1	MTR_8g062350	39.785	93	54	1	83	175	8	98	5.90e-15	71.6
MS.gene012752.t1	MTR_8g062350	43.023	86	42	2	167	250	7	87	4.70e-11	60.8
MS.gene012752.t1	MTR_1g104940	47.368	76	40	0	175	250	17	92	8.97e-15	69.3
MS.gene012752.t1	MTR_1g104940	40.698	86	51	0	89	174	14	99	1.85e-13	65.5
MS.gene012752.t1	MTR_1g104940	46.053	76	38	1	12	84	14	89	8.44e-12	61.2
MS.gene012752.t1	MTR_1g104937	36.364	99	63	0	89	187	12	110	3.34e-13	64.7
MS.gene012752.t1	MTR_1g104937	42.857	70	40	0	175	244	15	84	5.35e-12	61.2
MS.gene012752.t1	MTR_1g093310	46.667	75	34	1	175	249	12	80	5.34e-13	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene012752.t1	AT1G24190	39.735	151	82	2	11	152	13	163	2.77e-25	104
MS.gene012752.t1	AT1G24190	32.919	161	99	2	81	235	6	163	2.97e-19	87.4
MS.gene012752.t1	AT1G24190	54.286	70	32	0	175	244	17	86	1.71e-14	73.2
MS.gene012752.t1	AT1G24190	39.735	151	82	2	11	152	13	163	3.16e-25	104
MS.gene012752.t1	AT1G24190	32.919	161	99	2	81	235	6	163	3.45e-19	87.0
MS.gene012752.t1	AT1G24190	54.286	70	32	0	175	244	17	86	1.86e-14	73.2
MS.gene012752.t1	AT1G24190	39.735	151	82	2	11	152	13	163	3.17e-25	104
MS.gene012752.t1	AT1G24190	32.919	161	99	2	81	235	6	163	2.94e-19	87.4
MS.gene012752.t1	AT1G24190	54.286	70	32	0	175	244	17	86	1.77e-14	73.2
MS.gene012752.t1	AT1G70060	38.750	160	88	2	3	152	5	164	8.39e-24	100
MS.gene012752.t1	AT1G70060	33.333	159	102	1	81	235	6	164	3.44e-18	84.3
MS.gene012752.t1	AT1G70060	55.224	67	30	0	175	241	17	83	7.22e-14	71.2
MS.gene012752.t1	AT1G70060	38.750	160	88	2	3	152	5	164	8.39e-24	100
MS.gene012752.t1	AT1G70060	33.333	159	102	1	81	235	6	164	3.44e-18	84.3
MS.gene012752.t1	AT1G70060	55.224	67	30	0	175	241	17	83	7.22e-14	71.2
MS.gene012752.t1	AT3G01320	40.268	149	81	2	11	151	56	204	2.33e-23	99.4
MS.gene012752.t1	AT3G01320	33.766	154	100	1	83	234	51	204	3.72e-18	84.0
MS.gene012752.t1	AT3G01320	54.545	77	33	1	167	241	50	126	2.70e-17	81.6
MS.gene012752.t1	AT3G01320	40.268	149	81	2	11	151	56	204	2.40e-23	99.4
MS.gene012752.t1	AT3G01320	33.766	154	100	1	83	234	51	204	3.80e-18	84.0
MS.gene012752.t1	AT3G01320	54.545	77	33	1	167	241	50	126	2.68e-17	81.6
MS.gene012752.t1	AT1G59890	39.752	161	87	3	12	162	45	205	1.27e-22	97.1
MS.gene012752.t1	AT1G59890	37.162	148	92	1	89	235	45	192	6.02e-19	86.3
MS.gene012752.t1	AT1G59890	50.746	67	33	0	175	241	48	114	8.66e-13	68.2
MS.gene012752.t1	AT1G59890	39.752	161	87	3	12	162	45	205	1.28e-22	97.1
MS.gene012752.t1	AT1G59890	37.162	148	92	1	89	235	45	192	6.08e-19	86.3
MS.gene012752.t1	AT1G59890	50.746	67	33	0	175	241	48	114	8.75e-13	68.2
MS.gene012752.t1	AT1G59890	39.752	161	87	3	12	162	45	205	1.33e-22	97.1
MS.gene012752.t1	AT1G59890	37.162	148	92	1	89	235	45	192	6.48e-19	86.3
MS.gene012752.t1	AT1G59890	50.746	67	33	0	175	241	48	114	9.41e-13	68.2
MS.gene012752.t1	AT5G15020	38.926	149	84	2	11	152	51	199	1.39e-22	97.1
MS.gene012752.t1	AT5G15020	34.416	154	100	1	83	235	46	199	9.74e-20	88.6
MS.gene012752.t1	AT5G15020	51.316	76	35	1	168	241	46	121	6.34e-15	74.7
MS.gene012752.t1	AT1G59890	39.752	161	87	3	12	162	45	205	1.40e-22	97.1
MS.gene012752.t1	AT1G59890	37.162	148	92	1	89	235	45	192	6.43e-19	86.3
MS.gene012752.t1	AT1G59890	50.746	67	33	0	175	241	48	114	8.82e-13	68.2
MS.gene012752.t1	AT5G15020	38.926	149	84	2	11	152	51	199	1.52e-22	97.1
MS.gene012752.t1	AT5G15020	34.416	154	100	1	83	235	46	199	1.02e-19	88.6
MS.gene012752.t1	AT5G15020	51.316	76	35	1	168	241	46	121	6.52e-15	74.7
MS.gene012752.t1	AT1G10450	38.776	147	83	2	12	151	84	230	9.78e-21	91.7
MS.gene012752.t1	AT1G10450	37.838	148	89	2	89	234	84	230	1.43e-19	88.2
MS.gene012752.t1	AT1G10450	49.254	67	34	0	175	241	87	153	9.18e-13	68.2
MS.gene012752.t1	AT1G10450	38.776	147	83	2	12	151	33	179	1.13e-20	91.3
MS.gene012752.t1	AT1G10450	37.838	148	89	2	89	234	33	179	1.24e-19	88.2
MS.gene012752.t1	AT1G10450	49.254	67	34	0	175	241	36	102	9.11e-13	68.2
MS.gene012752.t1	AT1G10450	38.776	147	83	2	12	151	33	179	1.13e-20	91.3
MS.gene012752.t1	AT1G10450	37.838	148	89	2	89	234	33	179	1.24e-19	88.2
MS.gene012752.t1	AT1G10450	49.254	67	34	0	175	241	36	102	9.11e-13	68.2
MS.gene012752.t1	AT1G24230	33.758	157	91	3	89	244	14	158	2.55e-20	87.0
MS.gene012752.t1	AT1G24230	26.667	225	150	4	11	230	13	227	5.88e-19	83.6
MS.gene012752.t1	AT1G27260	34.615	156	91	3	90	236	4	157	3.14e-18	80.9
MS.gene012752.t1	AT1G27260	31.210	157	95	2	13	156	4	160	4.40e-15	72.4
MS.gene012752.t1	AT1G70030	34.416	154	87	5	12	155	11	160	5.07e-17	76.3
MS.gene012752.t1	AT1G70030	33.333	159	97	4	81	234	3	157	3.08e-15	71.6
MS.gene012752.t1	AT1G24200	35.570	149	90	2	89	234	14	159	1.43e-16	75.9
MS.gene012752.t1	AT1G24200	34.694	147	90	2	11	151	13	159	1.58e-16	75.9
MS.gene012752.t1	AT1G24200	46.053	76	39	1	167	240	7	82	7.69e-13	65.9
MS.gene012752.t1	AT1G24250	29.730	185	101	4	2	157	4	188	4.59e-16	75.9
MS.gene012752.t1	AT1G24250	28.235	170	97	4	88	233	13	181	4.10e-12	64.7
MS.gene012752.t1	AT1G23810	29.944	177	106	3	2	160	4	180	7.84e-16	74.7
MS.gene012752.t1	AT1G23810	30.189	159	97	4	88	233	13	170	1.84e-13	68.2
MS.gene012752.t1	AT1G27280	34.014	147	92	2	100	241	4	150	3.05e-15	72.8
MS.gene012752.t1	AT4G12020	51.515	66	31	1	176	241	312	376	8.53e-13	68.2
MS.gene012752.t1	AT4G12020	35.345	116	56	3	12	121	308	410	2.22e-11	63.9
MS.gene012752.t1	AT4G12020	51.515	66	31	1	176	241	312	376	8.91e-13	68.2
MS.gene012752.t1	AT4G12020	35.345	116	56	3	12	121	308	410	2.31e-11	63.9
MS.gene012752.t1	AT4G12020	51.515	66	31	1	176	241	312	376	8.91e-13	68.2
MS.gene012752.t1	AT4G12020	35.345	116	56	3	12	121	308	410	2.32e-11	63.9
MS.gene012752.t1	AT4G12020	51.515	66	31	1	176	241	312	376	8.91e-13	68.2
MS.gene012752.t1	AT4G12020	35.345	116	56	3	12	121	308	410	2.32e-11	63.9
MS.gene012752.t1	AT4G12020	51.515	66	31	1	176	241	245	309	8.92e-13	68.2
MS.gene012752.t1	AT4G12020	35.345	116	56	3	12	121	241	343	2.32e-11	63.9
MS.gene012752.t1	AT4G12020	51.515	66	31	1	176	241	312	376	8.95e-13	68.2
MS.gene012752.t1	AT4G12020	35.345	116	56	3	12	121	308	410	2.32e-11	63.9
MS.gene012752.t1	AT4G12020	51.515	66	31	1	176	241	312	376	8.95e-13	68.2
MS.gene012752.t1	AT4G12020	35.345	116	56	3	12	121	308	410	2.33e-11	63.9
MS.gene012752.t1	AT4G12020	51.515	66	31	1	176	241	312	376	8.96e-13	68.2
MS.gene012752.t1	AT4G12020	35.345	116	56	3	12	121	308	410	2.33e-11	63.9
MS.gene012752.t1	AT4G12020	51.515	66	31	1	176	241	312	376	8.96e-13	68.2
MS.gene012752.t1	AT4G12020	35.345	116	56	3	12	121	308	410	2.33e-11	63.9
MS.gene012752.t1	AT5G15025	50.746	67	33	0	175	241	50	116	1.29e-12	63.5
MS.gene012752.t1	AT5G15025	45.349	86	43	2	2	83	36	121	1.49e-12	63.2
MS.gene012752.t1	AT1G70030	33.333	147	66	6	12	155	22	139	2.40e-12	63.2
MS.gene012752.t1	AT4G12020	51.515	66	31	1	176	241	312	376	6.47e-12	65.9
MS.gene012752.t1	AT4G12020	51.515	66	31	1	176	241	312	376	6.47e-12	65.9
MS.gene012752.t1	AT1G24220	25.506	247	136	8	3	224	5	228	2.36e-11	63.9
MS.gene012752.t1	AT1G24220	25.506	247	136	8	3	224	5	228	2.36e-11	63.9
MS.gene012752.t1	AT5G35610	40.244	82	42	1	176	250	14	95	2.39e-11	60.8
MS.gene012752.t1	AT5G15040	44.776	67	37	0	175	241	6	72	2.61e-11	58.9
MS.gene012752.t1	AT5G15040	44.776	67	37	0	175	241	6	72	2.61e-11	58.9
MS.gene012752.t1	AT5G15040	44.776	67	37	0	175	241	6	72	2.61e-11	58.9
MS.gene012752.t1	AT1G27250	46.154	65	35	0	175	239	24	88	4.57e-11	59.7

Find 36 sgRNAs with CRISPR-Local

Find 40 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCCCAAAATTAAATGTTTA+TGG	0.087759	8.1:+628759	None:intergenic
AGACCATACAAATTTAATTT+TGG	0.091325	8.1:-628273	MS.gene012752:CDS
AGGCCATAAACATTTAATTT+TGG	0.093733	8.1:-628762	MS.gene012752:CDS
AATGTGAATCCGTATCTTTC+TGG	0.260796	8.1:+628482	None:intergenic
GGGCATGTCGATTTACTTTC+GGG	0.267983	8.1:-628521	MS.gene012752:CDS
ATTGCGATGAAGCTATTTAA+AGG	0.296597	8.1:-628542	MS.gene012752:CDS
AGTATGATTTCATAATTCTT+TGG	0.310501	8.1:+628722	None:intergenic
AGAGTGCATGAGTTGTTTAA+AGG	0.320962	8.1:-628782	MS.gene012752:CDS
AGGGCATGTCGATTTACTTT+CGG	0.325603	8.1:-628522	MS.gene012752:CDS
CAGAAGTCATGAGTGATTAC+AGG	0.353321	8.1:-628838	MS.gene012752:CDS
ATCCCAAAATTAAATTTGTA+TGG	0.371343	8.1:+628270	None:intergenic
TTGCGATGAAGCTATTTAAA+GGG	0.398600	8.1:-628541	MS.gene012752:CDS
ACTCTTGCTTTGACACCTCT+TGG	0.426483	8.1:+628800	None:intergenic
TCATGGCAATGAAGCTCAAA+TGG	0.432218	8.1:+628209	None:intergenic
AGTTGTGTTTCAAGATAAGA+TGG	0.435039	8.1:-628639	MS.gene012752:CDS
GAGCTTCATTGCCATGAGAC+TGG	0.471478	8.1:-628203	MS.gene012752:CDS
AGCCGTGTTTCATGATAAGT+TGG	0.480965	8.1:-628390	MS.gene012752:CDS
AGTGTGATTTGATGTTCCTC+TGG	0.511878	8.1:+628233	None:intergenic
TACTTCTTGCCAGAAAGATA+CGG	0.529766	8.1:-628491	MS.gene012752:CDS
CAAGGCTCAAGGAATTGATA+CGG	0.538557	8.1:-628330	MS.gene012752:CDS
TGTTTATGATCTTGCAACAG+TGG	0.557427	8.1:+628458	None:intergenic
TGAAATCATACTTCCTCCAT+CGG	0.558415	8.1:-628711	MS.gene012752:CDS
AATTGATACGGGAGGTGTTG+CGG	0.560033	8.1:-628318	MS.gene012752:CDS
GTCATGAGTGATTACAGGGA+TGG	0.580278	8.1:-628833	MS.gene012752:CDS
ATCAAACAAAGCATCGCTTG+TGG	0.584167	8.1:+628922	None:intergenic
ATCACAAATCACAAGGCTCA+AGG	0.601072	8.1:-628341	MS.gene012752:CDS
AAGGCTCAAGGAATTGATAC+GGG	0.604072	8.1:-628329	MS.gene012752:CDS
TTCCAACTTATCATGAAACA+CGG	0.609205	8.1:+628388	None:intergenic
TTGATGTTCCTCTGGCAGCA+AGG	0.614555	8.1:+628241	None:intergenic
TAAACTACTAACCAGTCTCA+TGG	0.620534	8.1:+628192	None:intergenic
AGAAGTCATGAGTGATTACA+GGG	0.629088	8.1:-628837	MS.gene012752:CDS
ATTCAATGCCTTGCTGCCAG+AGG	0.639665	8.1:-628249	MS.gene012752:CDS
ACAAGTTATCACAAATCACA+AGG	0.640420	8.1:-628348	MS.gene012752:CDS
CTGTTGCAAGATCATAAACA+AGG	0.655865	8.1:-628455	MS.gene012752:CDS
GCTCAAGGAATTGATACGGG+AGG	0.704641	8.1:-628326	MS.gene012752:CDS
GATGGACGAATTGATCCAAG+AGG	0.740587	8.1:-628815	MS.gene012752:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AGTATGATTTCATAATTCTT+TGG	+	chr8.1:628412-628431	None:intergenic	20.0%
!!	ATCCCAAAATTAAATTTGTA+TGG	+	chr8.1:628864-628883	None:intergenic	20.0%
!!	TTCCCAAAATTAAATGTTTA+TGG	+	chr8.1:628375-628394	None:intergenic	20.0%
!!!	AGACCATACAAATTTAATTT+TGG	-	chr8.1:628858-628877	MS.gene012752:CDS	20.0%
!!!	GACCATACAAATTTAATTTT+GGG	-	chr8.1:628859-628878	MS.gene012752:CDS	20.0%
!!!	AGGCCATAAACATTTAATTT+TGG	-	chr8.1:628369-628388	MS.gene012752:CDS	25.0%
!!!	GGCCATAAACATTTAATTTT+GGG	-	chr8.1:628370-628389	MS.gene012752:CDS	25.0%
	ACAAGTTATCACAAATCACA+AGG	-	chr8.1:628783-628802	MS.gene012752:CDS	30.0%
	AGTTGTGTTTCAAGATAAGA+TGG	-	chr8.1:628492-628511	MS.gene012752:CDS	30.0%
	ATTGCGATGAAGCTATTTAA+AGG	-	chr8.1:628589-628608	MS.gene012752:CDS	30.0%
	TTCCAACTTATCATGAAACA+CGG	+	chr8.1:628746-628765	None:intergenic	30.0%
	TTGCGATGAAGCTATTTAAA+GGG	-	chr8.1:628590-628609	MS.gene012752:CDS	30.0%
	AATGTGAATCCGTATCTTTC+TGG	+	chr8.1:628652-628671	None:intergenic	35.0%
	AGAAGTCATGAGTGATTACA+GGG	-	chr8.1:628294-628313	MS.gene012752:CDS	35.0%
	AGAGTGCATGAGTTGTTTAA+AGG	-	chr8.1:628349-628368	MS.gene012752:CDS	35.0%
	CTGTTGCAAGATCATAAACA+AGG	-	chr8.1:628676-628695	MS.gene012752:CDS	35.0%
	TACTTCTTGCCAGAAAGATA+CGG	-	chr8.1:628640-628659	MS.gene012752:CDS	35.0%
	TGAAATCATACTTCCTCCAT+CGG	-	chr8.1:628420-628439	MS.gene012752:CDS	35.0%
	TGTTTATGATCTTGCAACAG+TGG	+	chr8.1:628676-628695	None:intergenic	35.0%
!	GACATGTAGATTTTACTGCA+TGG	+	chr8.1:628252-628271	None:intergenic	35.0%
	AAGGCTCAAGGAATTGATAC+GGG	-	chr8.1:628802-628821	MS.gene012752:CDS	40.0%
	AGCCGTGTTTCATGATAAGT+TGG	-	chr8.1:628741-628760	MS.gene012752:CDS	40.0%
	AGTGTGATTTGATGTTCCTC+TGG	+	chr8.1:628901-628920	None:intergenic	40.0%
	ATCACAAATCACAAGGCTCA+AGG	-	chr8.1:628790-628809	MS.gene012752:CDS	40.0%
	CAAGGCTCAAGGAATTGATA+CGG	-	chr8.1:628801-628820	MS.gene012752:CDS	40.0%
	CAGAAGTCATGAGTGATTAC+AGG	-	chr8.1:628293-628312	MS.gene012752:CDS	40.0%
	TCATGGCAATGAAGCTCAAA+TGG	+	chr8.1:628925-628944	None:intergenic	40.0%
!	CGATTCAGTTTTTCATCCGA+TGG	+	chr8.1:628439-628458	None:intergenic	40.0%
!	TTCAGTTTTTCATCCGATGG+AGG	+	chr8.1:628436-628455	None:intergenic	40.0%
!!	AGGGCATGTCGATTTACTTT+CGG	-	chr8.1:628609-628628	MS.gene012752:CDS	40.0%
!!	ATCAAACAAAGCATCGCTTG+TGG	+	chr8.1:628212-628231	None:intergenic	40.0%
	ACTCTTGCTTTGACACCTCT+TGG	+	chr8.1:628334-628353	None:intergenic	45.0%
	GATGGACGAATTGATCCAAG+AGG	-	chr8.1:628316-628335	MS.gene012752:CDS	45.0%
	GTCATGAGTGATTACAGGGA+TGG	-	chr8.1:628298-628317	MS.gene012752:CDS	45.0%
!!	AATTGATACGGGAGGTGTTG+CGG	-	chr8.1:628813-628832	MS.gene012752:CDS	45.0%
!!	GGGCATGTCGATTTACTTTC+GGG	-	chr8.1:628610-628629	MS.gene012752:CDS	45.0%
	ATTCAATGCCTTGCTGCCAG+AGG	-	chr8.1:628882-628901	MS.gene012752:CDS	50.0%
	GAGCTTCATTGCCATGAGAC+TGG	-	chr8.1:628928-628947	MS.gene012752:CDS	50.0%
	GCTCAAGGAATTGATACGGG+AGG	-	chr8.1:628805-628824	MS.gene012752:CDS	50.0%
	TTGATGTTCCTCTGGCAGCA+AGG	+	chr8.1:628893-628912	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	628199	628954	628199	ID=MS.gene012752
chr8.1	mRNA	628199	628954	628199	ID=MS.gene012752.t1;Parent=MS.gene012752
chr8.1	exon	628199	628954	628199	ID=MS.gene012752.t1.exon1;Parent=MS.gene012752.t1
chr8.1	CDS	628199	628954	628199	ID=cds.MS.gene012752.t1;Parent=MS.gene012752.t1

Gene Sequence

>MS.gene012752

ATGAATAGCTCCACAAGCGATGCTTTGTTTGATGATGCATGTGCGTATGACCATGCAGTAAAATCTACATGTCAAGAAAAGTATTCTGAATTTGCAGAAGTCATGAGTGATTACAGGGATGGACGAATTGATCCAAGAGGTGTCAAAGCAAGAGTGCATGAGTTGTTTAAAGGCCATAAACATTTAATTTTGGGAATCAACAACATCATGCCAAAGAATTATGAAATCATACTTCCTCCATCGGATGAAAAACTGAATCGACAAGATGCAACAACTTTTCTCAAACAAGTAAAAGTTGTGTTTCAAGATAAGATGGAAAAATATTATGAGTTTCTACAAGTCATACAAGACTACATGAATCTCACAATTGATATATTAGATGTCATCAAAATTGCGATGAAGCTATTTAAAGGGCATGTCGATTTACTTTCGGGATTCAACTACTTCTTGCCAGAAAGATACGGATTCACATTTCCACTGTTGCAAGATCATAAACAAGGTCATCAATTAGTGATAAAAGATGCATTTCTCAATGAAGTCAAAGCCGTGTTTCATGATAAGTTGGAAAAATATTTTGAGTTTTTACAAGTTATCACAAATCACAAGGCTCAAGGAATTGATACGGGAGGTGTTGCGGCAATAGTGAAAGAGTTATTTAAAGACCATACAAATTTAATTTTGGGATTCAATGCCTTGCTGCCAGAGGAACATCAAATCACACTTCCATTTGAGCTTCATTGCCATGAGACTGGTTAG

Protein sequence

>MS.gene012752.t1

MNSSTSDALFDDACAYDHAVKSTCQEKYSEFAEVMSDYRDGRIDPRGVKARVHELFKGHKHLILGINNIMPKNYEIILPPSDEKLNRQDATTFLKQVKVVFQDKMEKYYEFLQVIQDYMNLTIDILDVIKIAMKLFKGHVDLLSGFNYFLPERYGFTFPLLQDHKQGHQLVIKDAFLNEVKAVFHDKLEKYFEFLQVITNHKAQGIDTGGVAAIVKELFKDHTNLILGFNALLPEEHQITLPFELHCHETG