AlfalfaGEDB | MS.gene85574

M. sativa cultivar XinJiangDaYe / MS.gene85574

KEGG: K11644
GO: GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:1903506 GO:2000112 GO:2001141
PFAM: PF02671.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene85574.t1	XP_004496806.1	44.1	254	115	2	53	279	20	273	2.10E-52	216.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene85574.t1	Q9LFQ3	43.9	148	76	1	127	267	51	198	2.0e-27	124.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene85574.t1	A0A1S2XZ63	44.1	254	115	2	53	279	20	273	1.5e-52	216.1

TFs/TRs:

Gene ID	Type	Classification
MS.gene85574.t1	TR	Others

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene85574	MS.gene93863	PPI
MS.gene85574	MS.gene93862	PPI
MS.gene85574	MS.gene95089	PPI
MS.gene85574	MS.gene80089	PPI
MS.gene85574	MS.gene93864	PPI
MS.gene85574	MS.gene99644	PPI
MS.gene85574	MS.gene80087	PPI
MS.gene85574	MS.gene71600	PPI
MS.gene85574	MS.gene99643	PPI
MS.gene85574	MS.gene43439	PPI
MS.gene85574	MS.gene60770	PPI
MS.gene85574	MS.gene91421	PPI
MS.gene85574	MS.gene012752	PPI
MS.gene85574	MS.gene91330	PPI
MS.gene85574	MS.gene91422	PPI
MS.gene91330	MS.gene85574	PPI
MS.gene85574	MS.gene80088	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene85574.t1	MTR_4g133300	44.118	238	121	3	50	278	11	245	1.11e-55	180
MS.gene85574.t1	MTR_4g133300	48.309	207	98	2	3	200	38	244	1.28e-53	175
MS.gene85574.t1	MTR_4g133470	44.118	238	121	3	50	278	11	245	2.55e-54	177
MS.gene85574.t1	MTR_4g133470	48.309	207	98	2	3	200	38	244	2.87e-52	171
MS.gene85574.t1	MTR_1g105955	45.122	164	88	1	47	208	12	175	2.87e-42	143
MS.gene85574.t1	MTR_1g105955	46.711	152	79	1	124	273	12	163	7.08e-42	142
MS.gene85574.t1	MTR_1g105955	47.059	119	61	1	3	119	45	163	1.21e-29	110
MS.gene85574.t1	MTR_1g093310	76.471	85	14	1	197	281	1	79	1.37e-38	130
MS.gene85574.t1	MTR_1g093310	75.949	79	13	1	122	200	3	75	3.75e-34	119
MS.gene85574.t1	MTR_1g093310	69.767	86	20	1	43	128	1	80	1.58e-33	117
MS.gene85574.t1	MTR_1g093310	68.627	51	10	1	1	51	36	80	5.70e-15	68.9
MS.gene85574.t1	MTR_3g006065	46.012	163	76	3	128	281	8	167	1.17e-33	121
MS.gene85574.t1	MTR_3g006065	43.182	176	88	3	51	217	8	180	2.59e-33	120
MS.gene85574.t1	MTR_3g006065	44.295	149	74	2	1	140	32	180	3.15e-28	107
MS.gene85574.t1	MTR_3g006150	46.795	156	71	3	51	197	8	160	1.55e-33	120
MS.gene85574.t1	MTR_3g006150	46.795	156	71	3	128	274	8	160	2.11e-33	120
MS.gene85574.t1	MTR_3g006150	48.837	129	57	2	1	120	32	160	1.67e-28	107
MS.gene85574.t1	MTR_3g006150	50.725	69	31	1	207	275	10	75	1.93e-13	67.0
MS.gene85574.t1	MTR_5g036670	44.371	151	75	1	50	191	42	192	2.72e-33	129
MS.gene85574.t1	MTR_5g036670	43.046	151	77	1	127	268	42	192	2.90e-32	126
MS.gene85574.t1	MTR_5g036670	44.628	121	58	1	3	114	72	192	1.85e-24	103
MS.gene85574.t1	MTR_5g036670	61.765	68	26	0	207	274	45	112	1.12e-19	89.4
MS.gene85574.t1	MTR_1g104960	40.000	170	93	1	46	206	8	177	1.89e-32	118
MS.gene85574.t1	MTR_1g104960	38.650	163	91	1	123	276	8	170	3.49e-30	112
MS.gene85574.t1	MTR_1g104960	44.094	127	62	1	3	120	42	168	1.30e-24	97.4
MS.gene85574.t1	MTR_3g006125	43.713	167	79	4	128	279	89	255	2.31e-31	117
MS.gene85574.t1	MTR_3g006125	45.122	164	73	4	51	198	89	251	3.51e-30	114
MS.gene85574.t1	MTR_3g006125	46.970	132	54	3	3	119	119	249	3.32e-24	98.6
MS.gene85574.t1	MTR_1g104980	40.816	147	81	1	130	276	1	141	5.96e-31	114
MS.gene85574.t1	MTR_1g104980	39.073	151	86	1	53	203	1	145	2.22e-29	110
MS.gene85574.t1	MTR_1g104980	42.017	119	63	1	2	120	27	139	1.94e-21	89.0
MS.gene85574.t1	MTR_7g013380	35.743	249	134	8	55	280	17	262	7.83e-31	117
MS.gene85574.t1	MTR_7g013380	33.486	218	117	6	3	197	44	256	4.24e-24	99.4
MS.gene85574.t1	MTR_7g013380	35.404	161	93	4	132	281	17	177	1.11e-16	78.6
MS.gene85574.t1	MTR_8g062700	42.484	153	73	2	50	190	41	190	2.82e-30	120
MS.gene85574.t1	MTR_8g062700	42.484	153	73	2	127	267	41	190	4.63e-30	119
MS.gene85574.t1	MTR_8g062700	62.319	69	26	0	207	275	44	112	4.36e-21	93.6
MS.gene85574.t1	MTR_8g062700	41.667	120	61	1	3	113	71	190	3.98e-20	90.9
MS.gene85574.t1	MTR_8g062700	42.484	153	73	2	50	190	41	190	2.82e-30	120
MS.gene85574.t1	MTR_8g062700	42.484	153	73	2	127	267	41	190	4.63e-30	119
MS.gene85574.t1	MTR_8g062700	62.319	69	26	0	207	275	44	112	4.36e-21	93.6
MS.gene85574.t1	MTR_8g062700	41.667	120	61	1	3	113	71	190	3.98e-20	90.9
MS.gene85574.t1	MTR_3g006185	42.515	167	80	4	128	279	8	173	1.23e-29	110
MS.gene85574.t1	MTR_3g006185	43.750	160	76	3	51	196	8	167	4.54e-29	109
MS.gene85574.t1	MTR_3g006185	44.615	130	59	2	3	119	38	167	4.22e-23	93.6
MS.gene85574.t1	MTR_3g006105	43.114	167	80	4	128	279	8	174	3.54e-29	109
MS.gene85574.t1	MTR_3g006105	44.099	161	75	3	51	196	8	168	7.82e-29	108
MS.gene85574.t1	MTR_3g006105	45.113	133	59	2	3	121	38	170	3.84e-23	94.0
MS.gene85574.t1	MTR_1g109550	45.161	124	67	1	55	178	20	142	9.66e-29	107
MS.gene85574.t1	MTR_1g109550	45.312	128	69	1	128	255	16	142	3.53e-28	105
MS.gene85574.t1	MTR_1g109550	46.465	99	53	0	3	101	44	142	2.03e-21	88.2
MS.gene85574.t1	MTR_1g109550	43.373	83	41	2	195	272	1	82	1.85e-14	69.3
MS.gene85574.t1	MTR_6g008970	42.000	150	78	1	50	190	62	211	9.80e-29	115
MS.gene85574.t1	MTR_6g008970	41.333	150	79	1	127	267	62	211	2.56e-28	114
MS.gene85574.t1	MTR_6g008970	41.667	120	61	1	3	113	92	211	5.40e-21	93.2
MS.gene85574.t1	MTR_6g008970	61.765	68	26	0	207	274	65	132	3.43e-18	85.1
MS.gene85574.t1	MTR_6g008995	41.497	147	79	2	128	267	37	183	2.23e-27	110
MS.gene85574.t1	MTR_6g008995	41.497	147	79	2	51	190	37	183	3.25e-27	110
MS.gene85574.t1	MTR_6g008995	29.893	281	170	9	3	268	66	334	2.32e-22	96.3
MS.gene85574.t1	MTR_6g008995	58.824	68	28	0	207	274	39	106	8.83e-18	83.2
MS.gene85574.t1	MTR_7g013410	40.000	140	80	1	132	267	2	141	4.25e-25	97.8
MS.gene85574.t1	MTR_7g013410	38.462	143	78	2	55	190	2	141	3.96e-23	92.4
MS.gene85574.t1	MTR_7g013410	41.026	117	61	2	3	113	27	141	6.80e-18	78.6
MS.gene85574.t1	MTR_7g013410	49.254	67	34	0	209	275	2	68	1.51e-13	67.0
MS.gene85574.t1	MTR_1g105960	47.748	111	41	2	130	240	3	96	1.54e-24	95.5
MS.gene85574.t1	MTR_1g105960	46.847	111	42	2	53	163	3	96	1.90e-23	92.4
MS.gene85574.t1	MTR_1g105960	61.194	67	26	0	207	273	3	69	2.78e-21	86.7
MS.gene85574.t1	MTR_1g105960	45.882	85	29	2	2	86	29	96	4.15e-12	62.0
MS.gene85574.t1	MTR_6g008995	29.893	281	170	9	3	268	9	277	1.84e-22	96.3
MS.gene85574.t1	MTR_6g008995	40.800	125	67	2	150	267	2	126	6.66e-22	94.7
MS.gene85574.t1	MTR_6g008995	40.800	125	67	2	73	190	2	126	9.76e-22	94.4
MS.gene85574.t1	MTR_6g008995	66.667	48	16	0	227	274	2	49	4.68e-13	68.9
MS.gene85574.t1	MTR_2g097830	44.554	101	50	2	127	224	69	166	6.87e-17	76.6
MS.gene85574.t1	MTR_2g097830	43.269	104	47	3	50	147	69	166	2.41e-16	75.1
MS.gene85574.t1	MTR_2g097830	53.521	71	30	1	3	70	96	166	2.83e-15	72.4
MS.gene85574.t1	MTR_2g097830	41.837	98	50	3	181	275	44	137	1.84e-12	64.7
MS.gene85574.t1	MTR_1g091047	52.308	65	30	1	50	113	8	72	7.45e-16	71.2
MS.gene85574.t1	MTR_1g091047	52.308	65	30	1	127	190	8	72	9.05e-16	70.9
MS.gene85574.t1	MTR_1g091047	52.308	65	30	1	204	267	8	72	3.70e-15	69.3
MS.gene85574.t1	MTR_8g062350	49.315	73	37	0	126	198	12	84	9.53e-16	74.3
MS.gene85574.t1	MTR_8g062350	28.444	225	120	6	49	267	12	201	1.03e-15	74.3
MS.gene85574.t1	MTR_8g062350	42.857	77	44	0	203	279	12	88	8.14e-14	68.9
MS.gene85574.t1	MTR_1g105010	44.776	67	37	0	207	273	18	84	1.25e-13	66.6
MS.gene85574.t1	MTR_1g105010	46.269	67	36	0	130	196	18	84	1.44e-13	66.2
MS.gene85574.t1	MTR_1g105010	44.776	67	37	0	53	119	18	84	4.96e-13	64.7
MS.gene85574.t1	MTR_1g104940	45.570	79	40	1	207	282	16	94	1.61e-13	66.2
MS.gene85574.t1	MTR_1g104940	44.595	74	41	0	130	203	16	89	4.22e-13	65.1
MS.gene85574.t1	MTR_1g104940	44.156	77	40	1	53	129	16	89	8.25e-12	61.6
MS.gene85574.t1	MTR_1g100260	45.122	82	41	1	129	206	25	106	3.96e-13	65.5
MS.gene85574.t1	MTR_1g100260	48.193	83	35	3	206	282	25	105	5.87e-13	64.7
MS.gene85574.t1	MTR_1g100260	46.575	73	35	1	52	120	25	97	1.46e-11	60.8
MS.gene85574.t1	MTR_1g023820	66.667	42	14	0	81	122	17	58	1.67e-12	63.5
MS.gene85574.t1	MTR_1g023820	62.222	45	17	0	235	279	17	61	2.17e-12	63.2
MS.gene85574.t1	MTR_1g023820	66.667	42	14	0	158	199	17	58	4.44e-12	62.4
MS.gene85574.t1	MTR_1g106560	50.847	59	14	1	224	282	16	59	2.43e-11	58.5
MS.gene85574.t1	MTR_7g083950	48.649	74	36	2	41	112	2	75	3.25e-11	63.5
MS.gene85574.t1	MTR_7g083950	53.030	66	29	2	126	189	10	75	5.76e-11	62.8
MS.gene85574.t1	MTR_1g104937	41.429	70	41	0	207	276	14	83	5.70e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene85574.t1	AT1G24230	33.937	221	133	6	50	263	13	227	4.40e-33	121
MS.gene85574.t1	AT1G24230	37.662	154	89	3	127	279	13	160	2.03e-26	104
MS.gene85574.t1	AT1G24230	31.771	192	119	5	1	186	42	227	1.05e-23	97.1
MS.gene85574.t1	AT3G01320	44.079	152	71	2	50	190	56	204	1.47e-31	124
MS.gene85574.t1	AT3G01320	42.953	149	77	1	127	267	56	204	3.93e-31	122
MS.gene85574.t1	AT3G01320	44.262	122	54	2	3	113	86	204	8.09e-22	95.9
MS.gene85574.t1	AT3G01320	60.294	68	27	0	207	274	59	126	2.53e-18	85.5
MS.gene85574.t1	AT3G01320	44.079	152	71	2	50	190	56	204	1.47e-31	124
MS.gene85574.t1	AT3G01320	42.953	149	77	1	127	267	56	204	3.94e-31	122
MS.gene85574.t1	AT3G01320	44.262	122	54	2	3	113	86	204	8.10e-22	95.9
MS.gene85574.t1	AT3G01320	60.294	68	27	0	207	274	59	126	2.54e-18	85.5
MS.gene85574.t1	AT5G15020	44.595	148	75	2	127	267	51	198	1.71e-31	124
MS.gene85574.t1	AT5G15020	43.919	148	76	2	50	190	51	198	2.84e-31	123
MS.gene85574.t1	AT5G15020	41.525	118	62	1	3	113	81	198	5.08e-21	93.2
MS.gene85574.t1	AT5G15020	60.563	71	28	0	204	274	51	121	1.10e-18	86.7
MS.gene85574.t1	AT5G15020	44.595	148	75	2	127	267	51	198	1.72e-31	124
MS.gene85574.t1	AT5G15020	43.919	148	76	2	50	190	51	198	2.85e-31	123
MS.gene85574.t1	AT5G15020	41.525	118	62	1	3	113	81	198	5.09e-21	93.2
MS.gene85574.t1	AT5G15020	60.563	71	28	0	204	274	51	121	1.10e-18	86.7
MS.gene85574.t1	AT1G24190	42.000	150	78	1	50	190	13	162	1.64e-29	118
MS.gene85574.t1	AT1G24190	42.484	153	73	2	127	267	13	162	2.14e-29	117
MS.gene85574.t1	AT1G24190	42.149	121	61	2	2	113	42	162	1.25e-20	92.0
MS.gene85574.t1	AT1G24190	61.765	68	26	0	207	274	16	83	2.49e-19	88.6
MS.gene85574.t1	AT1G24190	42.000	150	78	1	50	190	13	162	1.87e-29	118
MS.gene85574.t1	AT1G24190	42.484	153	73	2	127	267	13	162	2.42e-29	117
MS.gene85574.t1	AT1G24190	42.149	121	61	2	2	113	42	162	1.39e-20	92.0
MS.gene85574.t1	AT1G24190	61.765	68	26	0	207	274	16	83	2.78e-19	88.2
MS.gene85574.t1	AT1G24190	42.000	150	78	1	50	190	13	162	1.91e-29	117
MS.gene85574.t1	AT1G24190	42.484	153	73	2	127	267	13	162	2.52e-29	117
MS.gene85574.t1	AT1G24190	42.149	121	61	2	2	113	42	162	1.43e-20	92.0
MS.gene85574.t1	AT1G24190	61.765	68	26	0	207	274	16	83	2.89e-19	88.2
MS.gene85574.t1	AT1G10450	39.535	172	94	2	47	208	80	251	1.92e-29	117
MS.gene85574.t1	AT1G10450	38.411	151	86	1	124	267	80	230	9.20e-26	107
MS.gene85574.t1	AT1G10450	41.525	118	62	2	3	113	113	230	2.52e-19	88.2
MS.gene85574.t1	AT1G10450	55.882	68	30	0	207	274	86	153	2.43e-16	79.3
MS.gene85574.t1	AT1G10450	39.535	172	94	2	47	208	29	200	2.17e-29	117
MS.gene85574.t1	AT1G10450	38.411	151	86	1	124	267	29	179	1.01e-25	107
MS.gene85574.t1	AT1G10450	41.525	118	62	2	3	113	62	179	2.74e-19	88.2
MS.gene85574.t1	AT1G10450	55.882	68	30	0	207	274	35	102	2.57e-16	79.3
MS.gene85574.t1	AT1G10450	39.535	172	94	2	47	208	29	200	2.17e-29	117
MS.gene85574.t1	AT1G10450	38.411	151	86	1	124	267	29	179	1.01e-25	107
MS.gene85574.t1	AT1G10450	41.525	118	62	2	3	113	62	179	2.74e-19	88.2
MS.gene85574.t1	AT1G10450	55.882	68	30	0	207	274	35	102	2.57e-16	79.3
MS.gene85574.t1	AT1G70060	41.830	153	75	2	50	190	13	163	1.87e-27	112
MS.gene85574.t1	AT1G70060	41.830	153	75	2	127	267	13	163	6.36e-27	110
MS.gene85574.t1	AT1G70060	42.149	121	60	2	3	113	43	163	2.00e-19	88.6
MS.gene85574.t1	AT1G70060	60.294	68	27	0	207	274	16	83	9.36e-18	83.6
MS.gene85574.t1	AT1G70060	41.830	153	75	2	50	190	13	163	1.87e-27	112
MS.gene85574.t1	AT1G70060	41.830	153	75	2	127	267	13	163	6.36e-27	110
MS.gene85574.t1	AT1G70060	42.149	121	60	2	3	113	43	163	2.00e-19	88.6
MS.gene85574.t1	AT1G70060	60.294	68	27	0	207	274	16	83	9.36e-18	83.6
MS.gene85574.t1	AT1G24200	39.333	150	85	1	47	190	10	159	1.23e-26	103
MS.gene85574.t1	AT1G24200	37.333	150	88	1	124	267	10	159	3.41e-24	97.1
MS.gene85574.t1	AT1G24200	46.575	73	39	0	201	273	10	82	9.24e-15	71.6
MS.gene85574.t1	AT1G24200	35.294	119	71	1	1	113	41	159	3.20e-14	70.1
MS.gene85574.t1	AT1G59890	40.816	147	80	1	51	190	45	191	2.96e-26	108
MS.gene85574.t1	AT1G59890	38.776	147	83	1	128	267	45	191	1.20e-24	103
MS.gene85574.t1	AT1G59890	60.294	68	27	0	207	274	47	114	7.82e-19	87.0
MS.gene85574.t1	AT1G59890	40.678	118	63	2	3	113	74	191	2.75e-17	82.4
MS.gene85574.t1	AT1G59890	40.816	147	80	1	51	190	45	191	2.97e-26	108
MS.gene85574.t1	AT1G59890	38.776	147	83	1	128	267	45	191	1.20e-24	103
MS.gene85574.t1	AT1G59890	60.294	68	27	0	207	274	47	114	7.83e-19	87.0
MS.gene85574.t1	AT1G59890	40.678	118	63	2	3	113	74	191	2.75e-17	82.4
MS.gene85574.t1	AT1G59890	40.816	147	80	1	51	190	45	191	2.97e-26	108
MS.gene85574.t1	AT1G59890	38.776	147	83	1	128	267	45	191	1.20e-24	103
MS.gene85574.t1	AT1G59890	60.294	68	27	0	207	274	47	114	7.83e-19	87.0
MS.gene85574.t1	AT1G59890	40.678	118	63	2	3	113	74	191	2.75e-17	82.4
MS.gene85574.t1	AT1G59890	40.816	147	80	1	51	190	45	191	3.00e-26	108
MS.gene85574.t1	AT1G59890	38.776	147	83	1	128	267	45	191	1.21e-24	103
MS.gene85574.t1	AT1G59890	60.294	68	27	0	207	274	47	114	7.92e-19	87.0
MS.gene85574.t1	AT1G59890	40.678	118	63	2	3	113	74	191	2.81e-17	82.4
MS.gene85574.t1	AT1G70030	39.189	148	81	3	128	267	11	157	4.15e-23	93.2
MS.gene85574.t1	AT1G70030	37.162	148	84	3	51	190	11	157	6.49e-22	90.1
MS.gene85574.t1	AT1G70030	36.975	119	66	3	3	113	40	157	7.09e-15	71.2
MS.gene85574.t1	AT1G70030	46.377	69	37	0	207	275	13	81	6.36e-13	65.9
MS.gene85574.t1	AT1G24250	25.506	247	140	4	50	266	13	245	2.56e-20	88.2
MS.gene85574.t1	AT1G24250	26.728	217	116	3	2	189	43	245	3.48e-17	79.3
MS.gene85574.t1	AT1G27260	27.273	220	134	3	54	260	6	212	1.20e-19	85.5
MS.gene85574.t1	AT1G27260	31.515	165	100	2	131	282	6	170	1.18e-18	82.8
MS.gene85574.t1	AT1G27260	27.551	196	110	4	4	183	33	212	9.76e-14	69.3
MS.gene85574.t1	AT1G23810	25.652	230	138	4	50	260	13	228	4.32e-19	84.3
MS.gene85574.t1	AT1G23810	29.885	174	104	3	127	282	13	186	2.95e-17	79.3
MS.gene85574.t1	AT1G23810	26.531	196	112	3	6	183	47	228	7.81e-16	75.5
MS.gene85574.t1	AT1G27250	44.444	90	49	1	127	215	20	109	1.43e-17	77.8
MS.gene85574.t1	AT1G27250	43.333	90	50	1	50	138	20	109	2.13e-17	77.4
MS.gene85574.t1	AT1G27250	46.377	69	37	0	204	272	20	88	6.05e-14	67.8
MS.gene85574.t1	AT4G12020	45.455	99	48	3	51	149	308	400	2.32e-17	82.4
MS.gene85574.t1	AT4G12020	43.434	99	50	3	128	226	308	400	6.14e-16	78.2
MS.gene85574.t1	AT4G12020	54.412	68	30	1	207	274	310	376	3.40e-15	76.3
MS.gene85574.t1	AT4G12020	45.455	99	48	3	51	149	308	400	2.44e-17	82.4
MS.gene85574.t1	AT4G12020	43.434	99	50	3	128	226	308	400	6.46e-16	78.2
MS.gene85574.t1	AT4G12020	54.412	68	30	1	207	274	310	376	3.58e-15	76.3
MS.gene85574.t1	AT4G12020	45.455	99	48	3	51	149	308	400	2.44e-17	82.4
MS.gene85574.t1	AT4G12020	43.434	99	50	3	128	226	308	400	6.46e-16	78.2
MS.gene85574.t1	AT4G12020	54.412	68	30	1	207	274	310	376	3.58e-15	76.3
MS.gene85574.t1	AT4G12020	45.455	99	48	3	51	149	308	400	2.45e-17	82.4
MS.gene85574.t1	AT4G12020	43.434	99	50	3	128	226	308	400	6.47e-16	78.2
MS.gene85574.t1	AT4G12020	54.412	68	30	1	207	274	310	376	3.58e-15	76.3
MS.gene85574.t1	AT4G12020	45.455	99	48	3	51	149	308	400	2.45e-17	82.4
MS.gene85574.t1	AT4G12020	43.434	99	50	3	128	226	308	400	6.47e-16	78.2
MS.gene85574.t1	AT4G12020	54.412	68	30	1	207	274	310	376	3.59e-15	76.3
MS.gene85574.t1	AT4G12020	45.455	99	48	3	51	149	308	400	2.45e-17	82.4
MS.gene85574.t1	AT4G12020	43.434	99	50	3	128	226	308	400	6.47e-16	78.2
MS.gene85574.t1	AT4G12020	54.412	68	30	1	207	274	310	376	3.59e-15	76.3
MS.gene85574.t1	AT4G12020	45.455	99	48	3	51	149	241	333	2.45e-17	82.4
MS.gene85574.t1	AT4G12020	43.434	99	50	3	128	226	241	333	6.48e-16	78.2
MS.gene85574.t1	AT4G12020	54.412	68	30	1	207	274	243	309	3.59e-15	76.3
MS.gene85574.t1	AT4G12020	45.455	99	48	3	51	149	308	400	2.46e-17	82.4
MS.gene85574.t1	AT4G12020	43.434	99	50	3	128	226	308	400	6.50e-16	78.2
MS.gene85574.t1	AT4G12020	54.412	68	30	1	207	274	310	376	3.60e-15	76.3
MS.gene85574.t1	AT4G12020	45.455	99	48	3	51	149	308	400	2.46e-17	82.4
MS.gene85574.t1	AT4G12020	43.434	99	50	3	128	226	308	400	6.51e-16	78.2
MS.gene85574.t1	AT4G12020	54.412	68	30	1	207	274	310	376	3.60e-15	76.3
MS.gene85574.t1	AT4G12020	45.455	99	48	3	51	149	308	400	2.46e-17	82.4
MS.gene85574.t1	AT4G12020	43.434	99	50	3	128	226	308	400	6.51e-16	78.2
MS.gene85574.t1	AT4G12020	54.412	68	30	1	207	274	310	376	3.61e-15	76.3
MS.gene85574.t1	AT4G12020	45.455	99	48	3	51	149	308	400	2.46e-17	82.4
MS.gene85574.t1	AT4G12020	43.434	99	50	3	128	226	308	400	6.51e-16	78.2
MS.gene85574.t1	AT4G12020	54.412	68	30	1	207	274	310	376	3.61e-15	76.3
MS.gene85574.t1	AT1G27220	32.877	146	87	2	50	186	13	156	1.19e-16	76.6
MS.gene85574.t1	AT1G27220	44.330	97	52	1	127	223	13	107	3.17e-16	75.5
MS.gene85574.t1	AT1G27220	45.455	77	42	0	204	280	13	89	2.81e-14	70.1
MS.gene85574.t1	AT1G70030	38.571	140	61	4	128	267	22	136	4.83e-16	73.6
MS.gene85574.t1	AT1G70030	37.857	140	62	4	51	190	22	136	5.63e-16	73.6
MS.gene85574.t1	AT1G70030	47.059	68	36	0	207	274	24	91	5.50e-13	65.5
MS.gene85574.t1	AT1G70030	49.296	71	36	0	128	198	22	92	1.99e-14	68.9
MS.gene85574.t1	AT1G70030	48.571	70	36	0	51	120	22	91	3.62e-14	68.2
MS.gene85574.t1	AT1G70030	46.377	69	37	0	207	275	24	92	3.33e-13	65.5
MS.gene85574.t1	AT5G15025	53.521	71	33	0	127	197	46	116	2.58e-14	68.6
MS.gene85574.t1	AT5G15025	50.704	71	35	0	50	120	46	116	5.58e-13	64.7
MS.gene85574.t1	AT5G15025	46.479	71	38	0	204	274	46	116	2.65e-11	60.1
MS.gene85574.t1	AT1G27280	27.513	189	116	5	69	236	11	199	6.81e-14	69.7
MS.gene85574.t1	AT1G27280	29.054	148	94	2	146	282	11	158	2.06e-13	68.6
MS.gene85574.t1	AT1G27280	28.191	188	114	5	5	171	24	211	4.57e-12	64.7
MS.gene85574.t1	AT5G15040	49.254	67	34	0	131	197	6	72	5.24e-13	63.9
MS.gene85574.t1	AT5G15040	46.269	67	36	0	54	120	6	72	2.91e-12	62.0
MS.gene85574.t1	AT5G15040	43.056	72	41	0	208	279	6	77	1.09e-11	60.5
MS.gene85574.t1	AT5G15040	49.254	67	34	0	131	197	6	72	5.24e-13	63.9
MS.gene85574.t1	AT5G15040	46.269	67	36	0	54	120	6	72	2.91e-12	62.0
MS.gene85574.t1	AT5G15040	43.056	72	41	0	208	279	6	77	1.09e-11	60.5
MS.gene85574.t1	AT5G15040	49.254	67	34	0	131	197	6	72	5.24e-13	63.9
MS.gene85574.t1	AT5G15040	46.269	67	36	0	54	120	6	72	2.91e-12	62.0
MS.gene85574.t1	AT5G15040	43.056	72	41	0	208	279	6	77	1.09e-11	60.5
MS.gene85574.t1	AT1G27270	26.695	236	136	5	48	260	11	232	1.90e-12	65.9
MS.gene85574.t1	AT1G27270	31.098	164	91	3	125	266	11	174	3.51e-11	62.4
MS.gene85574.t1	AT1G24210	30.070	143	87	3	50	191	13	143	3.64e-11	60.8
MS.gene85574.t1	AT1G24210	30.323	155	95	3	127	280	13	155	7.89e-11	59.7

Find 59 sgRNAs with CRISPR-Local

Find 44 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGGGCATACAAATTTAATTT+TGG	0.084238	1.3:-54752301	MS.gene85574:CDS
AGGGCATACATATTTAATTT+TGG	0.100116	1.3:-54752763	MS.gene85574:CDS
AGGGCATACAGATTTAATTT+TGG	0.178085	1.3:-54752070	MS.gene85574:CDS
AGGGCATACAGATTTAATTT+TGG	0.178085	1.3:-54752532	MS.gene85574:CDS
GAAGTAAAGGAGCTGTTTAA+AGG	0.351657	1.3:-54752321	MS.gene85574:CDS
GAAGTAAAGGAGCTGTTTAA+AGG	0.351657	1.3:-54752783	MS.gene85574:CDS
GCAGTAAAGGAGCTGTTTAA+AGG	0.354318	1.3:-54752090	MS.gene85574:CDS
AATCATTCTGATGAGTTTCA+AGG	0.357830	1.3:-54752838	None:intergenic
GCCAGTCGATCATCATGGTT+TGG	0.374032	1.3:+54752459	None:intergenic
AAACATTCTGATGAGTTTCA+AGG	0.379269	1.3:-54752376	MS.gene85574:CDS
AAACATTCTGATGAGTTTCA+AGG	0.379269	1.3:-54752607	MS.gene85574:CDS
GTCAGTCGATCATCATGGTT+TGG	0.381408	1.3:+54752690	None:intergenic
GTCAGTCGACCATCATGGTT+TGG	0.383704	1.3:+54752228	None:intergenic
CCAGTCGATCATCATGGTTT+GGG	0.394292	1.3:+54752460	None:intergenic
CCATTCATCTCAAGTTGAAA+TGG	0.398941	1.3:+54752006	None:intergenic
TCAGTCGACCATCATGGTTT+GGG	0.400019	1.3:+54752229	None:intergenic
TCAGTCGATCATCATGGTTT+GGG	0.400019	1.3:+54752691	None:intergenic
AAACGTTCTGATGAGTTTCA+AGG	0.401132	1.3:-54752145	MS.gene85574:CDS
AGTAAGATTTCATGTTCCTT+TGG	0.408389	1.3:+54752723	None:intergenic
CCATTTCAACTTGAGATGAA+TGG	0.420898	1.3:-54752006	MS.gene85574:CDS
AGTGTGATTTCATGTTCCTT+TGG	0.441333	1.3:+54752492	None:intergenic
AGGTGTCGTGGCAGCAGTAA+AGG	0.441612	1.3:-54752103	MS.gene85574:CDS
TGATTTCATGTTCCTTTGGC+AGG	0.451994	1.3:+54752034	None:intergenic
TGATTTCATGTTCCTTTGGC+AGG	0.451994	1.3:+54752265	None:intergenic
TGATTTCATGTTCCTTTGGC+AGG	0.451994	1.3:+54752496	None:intergenic
CAGTAAAGGAGCTGTTTAAA+GGG	0.452750	1.3:-54752089	MS.gene85574:CDS
AGTGTGATTTCATGTTCCTT+TGG	0.456196	1.3:+54752030	None:intergenic
AGTGTGATTTCATGTTCCTT+TGG	0.460856	1.3:+54752261	None:intergenic
TCATCATGGTTTGGGGAGAA+TGG	0.465856	1.3:+54752699	None:intergenic
AAGTAAAGGAGCTGTTTAAA+GGG	0.466525	1.3:-54752320	MS.gene85574:CDS
AAGTAAAGGAGCTGTTTAAA+GGG	0.466525	1.3:-54752782	MS.gene85574:CDS
AGGTGTCGTGGCAGAAGTAA+AGG	0.471740	1.3:-54752334	MS.gene85574:CDS
AGGTGTCGTGGCAGAAGTAA+AGG	0.471740	1.3:-54752565	MS.gene85574:CDS
AGGTGTCGTGGCAGAAGTAA+AGG	0.471740	1.3:-54752796	MS.gene85574:CDS
TTCATGTTCCTTTGGTAGGA+AGG	0.474873	1.3:+54752731	None:intergenic
TTCATGTTCCTTTGGCAGGA+AGG	0.481994	1.3:+54752038	None:intergenic
TTCATGTTCCTTTGGCAGGA+AGG	0.481994	1.3:+54752269	None:intergenic
TTCATGTTCCTTTGGCAGGA+AGG	0.481994	1.3:+54752500	None:intergenic
AGATTTCATGTTCCTTTGGT+AGG	0.517527	1.3:+54752727	None:intergenic
GATCAAAGAATTGATATAAG+AGG	0.536309	1.3:-54752354	MS.gene85574:CDS
GATCAAAGAATTGATATAAG+AGG	0.536309	1.3:-54752585	MS.gene85574:CDS
GATCAAAGAATTGATATAAG+AGG	0.536309	1.3:-54752816	MS.gene85574:CDS
CCCAAACCATGATGATCGAC+TGG	0.536475	1.3:-54752460	MS.gene85574:CDS
AATTGATATAAGAGGTGTCG+TGG	0.601164	1.3:-54752115	MS.gene85574:CDS
ACATTCTCCCCAAACCATGA+TGG	0.607327	1.3:-54752237	MS.gene85574:CDS
AATTGATATAAGAGGTGTCG+TGG	0.607984	1.3:-54752346	MS.gene85574:CDS
AATTGATATAAGAGGTGTCG+TGG	0.607984	1.3:-54752577	MS.gene85574:CDS
AATTGATATAAGAGGTGTCG+TGG	0.607984	1.3:-54752808	MS.gene85574:CDS
ATTCAACACCTTCCTGCCAA+AGG	0.618562	1.3:-54752046	MS.gene85574:CDS
ATTCAACACCTTCCTGCCAA+AGG	0.618562	1.3:-54752277	MS.gene85574:CDS
ATTCAACACCTTCCTGCCAA+AGG	0.618562	1.3:-54752508	MS.gene85574:CDS
CAGTCGACCATCATGGTTTG+GGG	0.618948	1.3:+54752230	None:intergenic
TATATGTCAGTCGACCATCA+TGG	0.621817	1.3:+54752223	None:intergenic
GATATGCCAGTCGATCATCA+TGG	0.626717	1.3:+54752454	None:intergenic
GATATGTCAGTCGATCATCA+TGG	0.627422	1.3:+54752685	None:intergenic
CAGTCGATCATCATGGTTTG+GGG	0.647099	1.3:+54752461	None:intergenic
CAGTCGATCATCATGGTTTG+GGG	0.647099	1.3:+54752692	None:intergenic
ATTCAACACCTTCCTACCAA+AGG	0.654326	1.3:-54752739	MS.gene85574:CDS
TGGTCGACTGACATATATTG+CGG	0.664318	1.3:-54752217	MS.gene85574:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GATCAAAAAATTGATATAAG+AGG	-	chr1.3:54752707-54752726	MS.gene85574:CDS	20.0%
!!!	AAGTAAAGGAGATTTTTAAA+GGG	-	chr1.3:54752279-54752298	MS.gene85574:CDS	20.0%
!	GATCAAAGAATTGATATAAG+AGG	-	chr1.3:54752014-54752033	MS.gene85574:CDS	25.0%
!!	GAAGTAAAGGAGATTTTTAA+AGG	-	chr1.3:54752278-54752297	MS.gene85574:CDS	25.0%
!!!	AGGGCATACAAATTTAATTT+TGG	-	chr1.3:54752529-54752548	MS.gene85574:CDS	25.0%
!!!	AGGGCATACATATTTAATTT+TGG	-	chr1.3:54752067-54752086	MS.gene85574:CDS	25.0%
!!!	GGGCATACAAATTTAATTTT+GGG	-	chr1.3:54752530-54752549	MS.gene85574:CDS	25.0%
!!!	GGGCATACATATTTAATTTT+GGG	-	chr1.3:54752068-54752087	MS.gene85574:CDS	25.0%
	AAACATTCTGATGAGTTTCA+AGG	-	chr1.3:54752223-54752242	MS.gene85574:CDS	30.0%
	AAGTAAAGGAGCTGTTTAAA+GGG	-	chr1.3:54752048-54752067	MS.gene85574:CDS	30.0%
	AGTAAGATTTCATGTTCCTT+TGG	+	chr1.3:54752110-54752129	None:intergenic	30.0%
!!	AGGGCATACAGATTTAATTT+TGG	-	chr1.3:54752298-54752317	MS.gene85574:CDS	30.0%
!!	GGGCATACAGATTTAATTTT+GGG	-	chr1.3:54752299-54752318	MS.gene85574:CDS	30.0%
	AAACGTTCTGATGAGTTTCA+AGG	-	chr1.3:54752685-54752704	MS.gene85574:CDS	35.0%
	AGATTTCATGTTCCTTTGGT+AGG	+	chr1.3:54752106-54752125	None:intergenic	35.0%
	AGTGTGATTTCATGTTCCTT+TGG	+	chr1.3:54752341-54752360	None:intergenic	35.0%
	CAGTAAAGGAGCTGTTTAAA+GGG	-	chr1.3:54752741-54752760	MS.gene85574:CDS	35.0%
	CCATTTCAACTTGAGATGAA+TGG	-	chr1.3:54752824-54752843	MS.gene85574:CDS	35.0%
	GAAGTAAAGGAGCTGTTTAA+AGG	-	chr1.3:54752047-54752066	MS.gene85574:CDS	35.0%
!!	AATTGATATAAGAGGTGTCG+TGG	-	chr1.3:54752022-54752041	MS.gene85574:CDS	35.0%
!!	CCATTCATCTCAAGTTGAAA+TGG	+	chr1.3:54752827-54752846	None:intergenic	35.0%
	ATTCAACACCTTCCTACCAA+AGG	-	chr1.3:54752091-54752110	MS.gene85574:CDS	40.0%
	GATATGTCAGTCGATCATCA+TGG	+	chr1.3:54752148-54752167	None:intergenic	40.0%
	GCAGTAAAGGAGCTGTTTAA+AGG	-	chr1.3:54752740-54752759	MS.gene85574:CDS	40.0%
	TATATGTCAGTCGACCATCA+TGG	+	chr1.3:54752610-54752629	None:intergenic	40.0%
	TCAGTCGATCATCATGGTTT+GGG	+	chr1.3:54752142-54752161	None:intergenic	40.0%
	TGATTTCATGTTCCTTTGGC+AGG	+	chr1.3:54752337-54752356	None:intergenic	40.0%
	TGGTCGACTGACATATATTG+CGG	-	chr1.3:54752613-54752632	MS.gene85574:CDS	40.0%
	TTCATGTTCCTTTGGTAGGA+AGG	+	chr1.3:54752102-54752121	None:intergenic	40.0%
	ACATTCTCCCCAAACCATGA+TGG	-	chr1.3:54752593-54752612	MS.gene85574:CDS	45.0%
	ATTCAACACCTTCCTGCCAA+AGG	-	chr1.3:54752322-54752341	MS.gene85574:CDS	45.0%
	CAGTCGATCATCATGGTTTG+GGG	+	chr1.3:54752141-54752160	None:intergenic	45.0%
	CCAGTCGATCATCATGGTTT+GGG	+	chr1.3:54752373-54752392	None:intergenic	45.0%
	GATATGCCAGTCGATCATCA+TGG	+	chr1.3:54752379-54752398	None:intergenic	45.0%
	GTCAGTCGATCATCATGGTT+TGG	+	chr1.3:54752143-54752162	None:intergenic	45.0%
	TCAGTCGACCATCATGGTTT+GGG	+	chr1.3:54752604-54752623	None:intergenic	45.0%
	TTCATGTTCCTTTGGCAGGA+AGG	+	chr1.3:54752333-54752352	None:intergenic	45.0%
!	TCATCATGGTTTGGGGAGAA+TGG	+	chr1.3:54752134-54752153	None:intergenic	45.0%
	CAGTCGACCATCATGGTTTG+GGG	+	chr1.3:54752603-54752622	None:intergenic	50.0%
	CCCAAACCATGATGATCGAC+TGG	-	chr1.3:54752139-54752158	MS.gene85574:CDS	50.0%
	GCCAGTCGATCATCATGGTT+TGG	+	chr1.3:54752374-54752393	None:intergenic	50.0%
	GTCAGTCGACCATCATGGTT+TGG	+	chr1.3:54752605-54752624	None:intergenic	50.0%
!	AGGTGTCGTGGCAGAAGTAA+AGG	-	chr1.3:54752034-54752053	MS.gene85574:CDS	50.0%
!	AGGTGTCGTGGCAGCAGTAA+AGG	-	chr1.3:54752727-54752746	MS.gene85574:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	54752002	54752850	54752002	ID=MS.gene85574
chr1.3	mRNA	54752002	54752850	54752002	ID=MS.gene85574.t1;Parent=MS.gene85574
chr1.3	exon	54752002	54752850	54752002	ID=MS.gene85574.t1.exon1;Parent=MS.gene85574.t1
chr1.3	CDS	54752002	54752850	54752002	ID=cds.MS.gene85574.t1;Parent=MS.gene85574.t1

Gene Sequence

>MS.gene85574

ATGAGTTTCAAGGATCAAAGAATTGATATAAGAGGTGTCGTGGCAGAAGTAAAGGAGCTGTTTAAAGGGCATACATATTTAATTTTGGGATTCAACACCTTCCTACCAAAGGAACATGAAATCTTACTTCCATTCTCCCCAAACCATGATGATCGACTGACATATCTTGCGACAGTCAAAGTTGCATTTCAACATGACATGATGAAGTATGATCAATTCTTAAACATTCTGATGAGTTTCAAGGATCAAAGAATTGATATAAGAGGTGTCGTGGCAGAAGTAAAGGAGATTTTTAAAGGGCATACAGATTTAATTTTGGGATTCAACACCTTCCTGCCAAAGGAACATGAAATCACACTTCTATTCTCCCCAAACCATGATGATCGACTGGCATATCTTGCGACAGTCAAAGTTGCATTTCAACATGACATGATGAAGTATGATCAATTCTTAAACATTCTGATGAGTTTCAAGGATCAAAGAATTGATATAAGAGGTGTCGTGGCAGAAGTAAAGGAGCTGTTTAAAGGGCATACAAATTTAATTTTGGGATTCAACACCTTCCTGCCAAAGGAACATGAAATCACACTTACATTCTCCCCAAACCATGATGGTCGACTGACATATATTGCGGCAGTCAAAGTTGCATTTCAACATAACATGATGAAGTATGATCAATTCTTAAACGTTCTGATGAGTTTCAAGGATCAAAAAATTGATATAAGAGGTGTCGTGGCAGCAGTAAAGGAGCTGTTTAAAGGGCATACAGATTTAATTTTGGGATTCAACACCTTCCTGCCAAAGGAACATGAAATCACACTTCCATTTCAACTTGAGATGAATGGTTAG

Protein sequence

>MS.gene85574.t1

MSFKDQRIDIRGVVAEVKELFKGHTYLILGFNTFLPKEHEILLPFSPNHDDRLTYLATVKVAFQHDMMKYDQFLNILMSFKDQRIDIRGVVAEVKEIFKGHTDLILGFNTFLPKEHEITLLFSPNHDDRLAYLATVKVAFQHDMMKYDQFLNILMSFKDQRIDIRGVVAEVKELFKGHTNLILGFNTFLPKEHEITLTFSPNHDGRLTYIAAVKVAFQHNMMKYDQFLNVLMSFKDQKIDIRGVVAAVKELFKGHTDLILGFNTFLPKEHEITLPFQLEMNG