AlfalfaGEDB | MS.gene93862

M. sativa cultivar XinJiangDaYe / MS.gene93862

KEGG: K11644
GO: GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:1903506 GO:2000112 GO:2001141
PFAM: PF02671.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene93862.t1	RHN82063.1	81.7	169	19	1	13	181	2	158	2.20E-69	272.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene93862.t1	Q9XIK6	32.3	161	106	2	1	158	70	230	4.6e-15	83.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene93862.t1	A0A396K1D1	81.7	169	19	1	13	181	2	158	1.6e-69	272.7

TFs/TRs:

Gene ID	Type	Classification
MS.gene93862.t1	TR	Others

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene43439	MS.gene93862	PPI
MS.gene85574	MS.gene93862	PPI
MS.gene99643	MS.gene93862	PPI
MS.gene95089	MS.gene93862	PPI
MS.gene93862	MS.gene93863	PPI
MS.gene99644	MS.gene93862	PPI
MS.gene91330	MS.gene93862	PPI
MS.gene80089	MS.gene93862	PPI
MS.gene60770	MS.gene93862	PPI
MS.gene80087	MS.gene93862	PPI
MS.gene93863	MS.gene93862	PPI
MS.gene93862	MS.gene71600	PPI
MS.gene012752	MS.gene93862	PPI
MS.gene93862	MS.gene43439	PPI
MS.gene80088	MS.gene93862	PPI
MS.gene91421	MS.gene93862	PPI
MS.gene93864	MS.gene93862	PPI
MS.gene93862	MS.gene91422	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene93862.t1	MTR_1g104980	79.032	186	24	2	15	200	1	171	8.35e-95	279
MS.gene93862.t1	MTR_1g104980	52.838	229	54	2	99	327	2	176	9.25e-66	205
MS.gene93862.t1	MTR_1g104960	61.081	185	45	2	1	170	1	173	1.03e-66	207
MS.gene93862.t1	MTR_1g104960	55.682	176	55	1	104	279	21	173	3.91e-57	183
MS.gene93862.t1	MTR_1g104960	51.807	83	40	0	202	284	10	92	9.96e-20	85.5
MS.gene93862.t1	MTR_4g133470	40.143	279	130	8	1	277	1	244	1.83e-43	150
MS.gene93862.t1	MTR_4g133470	40.331	181	76	6	113	292	26	175	5.03e-22	93.6
MS.gene93862.t1	MTR_4g133300	38.849	278	135	6	1	277	1	244	4.21e-43	149
MS.gene93862.t1	MTR_4g133300	37.778	180	82	4	113	292	26	175	5.87e-21	90.5
MS.gene93862.t1	MTR_1g104940	58.416	101	41	1	99	199	17	116	8.09e-31	113
MS.gene93862.t1	MTR_1g104940	51.887	106	50	1	208	313	17	121	9.93e-28	105
MS.gene93862.t1	MTR_1g104940	61.250	80	29	1	5	82	4	83	5.36e-25	97.8
MS.gene93862.t1	MTR_7g013380	31.271	291	160	7	1	280	1	262	2.31e-30	117
MS.gene93862.t1	MTR_7g013380	30.808	198	106	4	100	293	17	187	1.86e-16	79.0
MS.gene93862.t1	MTR_1g105955	39.634	164	93	3	2	164	5	163	7.43e-29	110
MS.gene93862.t1	MTR_1g105955	33.714	175	86	1	99	273	19	163	2.54e-25	100
MS.gene93862.t1	MTR_3g006125	40.828	169	91	3	11	170	87	255	3.59e-27	107
MS.gene93862.t1	MTR_3g006125	36.898	187	89	4	99	279	92	255	9.24e-22	92.8
MS.gene93862.t1	MTR_3g006185	40.476	168	92	3	11	170	6	173	9.06e-27	104
MS.gene93862.t1	MTR_3g006185	36.066	183	95	4	99	279	11	173	1.40e-18	82.4
MS.gene93862.t1	MTR_1g104937	59.740	77	31	0	6	82	5	81	3.32e-25	98.2
MS.gene93862.t1	MTR_1g104937	55.172	87	38	1	208	294	15	100	7.45e-23	92.0
MS.gene93862.t1	MTR_1g104937	52.525	99	39	2	99	190	15	112	1.24e-22	91.3
MS.gene93862.t1	MTR_3g006105	40.588	170	83	5	11	167	6	170	2.86e-24	97.8
MS.gene93862.t1	MTR_3g006105	36.667	180	92	5	99	276	11	170	8.98e-20	85.9
MS.gene93862.t1	MTR_3g006150	38.418	177	81	4	99	274	11	160	1.44e-23	95.1
MS.gene93862.t1	MTR_3g006150	42.208	154	75	4	12	158	7	153	9.67e-23	93.2
MS.gene93862.t1	MTR_3g006150	42.353	85	45	2	208	292	11	91	1.86e-13	67.8
MS.gene93862.t1	MTR_1g104950	60.465	86	25	2	36	117	1	81	5.60e-22	88.6
MS.gene93862.t1	MTR_1g104950	42.593	108	35	2	119	226	1	81	6.17e-17	75.1
MS.gene93862.t1	MTR_1g104950	47.945	73	36	1	228	298	1	73	3.08e-13	64.7
MS.gene93862.t1	MTR_3g006065	39.412	170	87	5	12	172	7	169	9.25e-21	88.6
MS.gene93862.t1	MTR_3g006065	36.994	173	82	4	112	281	21	169	5.07e-20	86.7
MS.gene93862.t1	MTR_5g036670	35.484	155	89	4	11	158	41	191	1.40e-17	84.3
MS.gene93862.t1	MTR_5g036670	29.891	184	103	2	87	267	31	191	3.85e-17	82.8
MS.gene93862.t1	MTR_5g036670	35.780	109	65	1	208	311	46	154	4.91e-12	67.4
MS.gene93862.t1	MTR_8g062700	35.897	156	87	6	11	158	40	190	9.36e-16	78.6
MS.gene93862.t1	MTR_8g062700	33.728	169	89	2	99	267	45	190	9.44e-16	78.6
MS.gene93862.t1	MTR_8g062700	50.000	74	36	1	208	281	45	117	3.51e-13	70.9
MS.gene93862.t1	MTR_8g062700	35.897	156	87	6	11	158	40	190	9.62e-16	78.6
MS.gene93862.t1	MTR_8g062700	33.728	169	89	2	99	267	45	190	1.01e-15	78.6
MS.gene93862.t1	MTR_8g062700	50.000	74	36	1	208	281	45	117	3.61e-13	70.9
MS.gene93862.t1	MTR_1g105960	44.872	78	43	0	208	285	4	81	1.04e-15	72.4
MS.gene93862.t1	MTR_1g105960	44.872	78	43	0	99	176	4	81	4.33e-15	70.9
MS.gene93862.t1	MTR_1g105960	37.288	118	51	2	14	131	2	96	2.85e-13	65.9
MS.gene93862.t1	MTR_1g109550	39.200	125	69	2	7	131	10	127	1.87e-15	72.8
MS.gene93862.t1	MTR_1g109550	34.307	137	57	3	104	240	24	127	9.47e-12	62.4
MS.gene93862.t1	MTR_6g008970	35.065	154	91	3	11	158	61	211	2.73e-15	77.4
MS.gene93862.t1	MTR_6g008970	29.586	169	96	1	99	267	66	211	7.63e-12	67.0
MS.gene93862.t1	MTR_6g008995	34.667	150	91	3	13	158	37	183	3.29e-15	76.6
MS.gene93862.t1	MTR_1g105010	52.381	63	30	0	13	75	16	78	1.52e-14	69.7
MS.gene93862.t1	MTR_8g062350	44.286	70	39	0	13	82	14	83	3.74e-12	65.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene93862.t1	AT1G27260	36.994	173	90	2	99	271	6	159	1.30e-24	99.8
MS.gene93862.t1	AT1G27260	35.519	183	103	3	11	183	1	178	2.04e-23	96.7
MS.gene93862.t1	AT1G27260	35.345	116	73	1	208	321	6	121	8.00e-11	61.6
MS.gene93862.t1	AT1G24230	36.025	161	90	4	11	170	12	160	1.36e-21	92.4
MS.gene93862.t1	AT1G23810	31.507	219	133	4	99	316	17	219	5.93e-21	90.5
MS.gene93862.t1	AT1G23810	28.261	184	110	5	16	183	17	194	2.46e-13	68.9
MS.gene93862.t1	AT1G24250	30.455	220	145	4	99	316	17	230	4.36e-20	88.2
MS.gene93862.t1	AT1G24250	28.718	195	106	6	16	183	17	205	3.72e-13	68.9
MS.gene93862.t1	AT1G10450	33.939	165	98	4	1	158	19	179	1.38e-16	81.3
MS.gene93862.t1	AT1G10450	31.765	170	89	3	99	267	36	179	1.06e-12	69.3
MS.gene93862.t1	AT1G10450	33.939	165	98	4	1	158	19	179	1.38e-16	81.3
MS.gene93862.t1	AT1G10450	31.765	170	89	3	99	267	36	179	1.06e-12	69.3
MS.gene93862.t1	AT1G10450	33.939	165	98	4	1	158	70	230	1.41e-16	81.3
MS.gene93862.t1	AT1G10450	31.765	170	89	3	99	267	87	230	1.14e-12	69.3
MS.gene93862.t1	AT1G24190	34.940	166	92	6	11	166	12	171	8.77e-16	79.0
MS.gene93862.t1	AT1G24190	30.556	180	97	6	99	275	17	171	6.92e-12	67.0
MS.gene93862.t1	AT1G24190	34.940	166	92	6	11	166	12	171	9.01e-16	79.0
MS.gene93862.t1	AT1G24190	30.556	180	97	6	99	275	17	171	7.24e-12	67.0
MS.gene93862.t1	AT1G24190	34.940	166	92	6	11	166	12	171	9.19e-16	79.0
MS.gene93862.t1	AT1G24190	30.556	180	97	6	99	275	17	171	7.59e-12	67.0
MS.gene93862.t1	AT5G15020	36.184	152	86	4	13	158	52	198	1.04e-15	78.6
MS.gene93862.t1	AT5G15020	28.421	190	108	3	99	285	55	219	5.74e-11	64.3
MS.gene93862.t1	AT5G15020	36.184	152	86	4	13	158	52	198	1.11e-15	78.6
MS.gene93862.t1	AT5G15020	28.421	190	108	3	99	285	55	219	6.18e-11	63.9
MS.gene93862.t1	AT3G01320	33.918	171	97	6	11	174	55	216	2.31e-15	77.8
MS.gene93862.t1	AT3G01320	28.108	185	105	3	99	283	60	216	5.49e-11	64.3
MS.gene93862.t1	AT3G01320	33.918	171	97	6	11	174	55	216	2.53e-15	77.4
MS.gene93862.t1	AT3G01320	28.108	185	105	3	99	283	60	216	6.29e-11	63.9
MS.gene93862.t1	AT1G70060	35.185	162	95	4	4	158	5	163	6.70e-15	76.3
MS.gene93862.t1	AT1G70060	30.178	169	96	2	99	267	17	163	8.68e-12	66.6
MS.gene93862.t1	AT1G70060	35.185	162	95	4	4	158	5	163	6.70e-15	76.3
MS.gene93862.t1	AT1G70060	30.178	169	96	2	99	267	17	163	8.68e-12	66.6
MS.gene93862.t1	AT1G59890	34.416	154	86	4	13	158	45	191	3.44e-13	70.9
MS.gene93862.t1	AT1G59890	34.416	154	86	4	13	158	45	191	4.09e-13	70.9
MS.gene93862.t1	AT1G59890	34.416	154	86	4	13	158	45	191	4.17e-13	70.9
MS.gene93862.t1	AT1G59890	34.416	154	86	4	13	158	45	191	4.37e-13	70.5
MS.gene93862.t1	AT1G27280	31.646	158	103	2	24	176	4	161	1.23e-12	66.6
MS.gene93862.t1	AT1G27280	30.168	179	104	4	107	285	4	161	1.24e-11	63.9
MS.gene93862.t1	AT1G24200	32.515	163	86	6	9	159	10	160	1.39e-12	66.2
MS.gene93862.t1	AT1G24200	44.578	83	43	2	191	273	3	82	5.31e-12	64.3
MS.gene93862.t1	AT1G27220	40.260	77	46	0	5	81	6	82	1.74e-12	65.5
MS.gene93862.t1	AT5G15025	40.741	81	48	0	2	82	36	116	1.82e-12	63.9
MS.gene93862.t1	AT5G15040	41.791	67	39	0	99	165	6	72	1.03e-11	60.8
MS.gene93862.t1	AT5G15040	37.681	69	43	0	206	274	4	72	5.35e-11	58.9
MS.gene93862.t1	AT5G15040	41.791	67	39	0	99	165	6	72	1.03e-11	60.8
MS.gene93862.t1	AT5G15040	37.681	69	43	0	206	274	4	72	5.35e-11	58.9
MS.gene93862.t1	AT5G15040	41.791	67	39	0	99	165	6	72	1.03e-11	60.8
MS.gene93862.t1	AT5G15040	37.681	69	43	0	206	274	4	72	5.35e-11	58.9

Find 48 sgRNAs with CRISPR-Local

Find 58 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACTGCTGTTGCAAACGAATT+TGG	0.114157	1.2:-77890874	None:intergenic
GTCCCAAAAGTAAATCTTTA+TGG	0.189829	1.2:-77891020	None:intergenic
TGAAACTCCTACATGATTTC+AGG	0.203193	1.2:+77890692	MS.gene93862:CDS
AACTCTAAAATCAATTCTTT+TGG	0.284021	1.2:-77891292	None:intergenic
AACTCTCATATCAATTCTTT+TGG	0.286653	1.2:-77890965	None:intergenic
CTGCTGTTGCAAACGAATTT+GGG	0.300087	1.2:-77890873	None:intergenic
AACTCTTCTATCAATTCTTT+TGG	0.305538	1.2:-77890716	None:intergenic
AGACCATAAAGATTTACTTT+TGG	0.338463	1.2:+77891017	MS.gene93862:CDS
TGAAGCAATGACGTTTATAA+AGG	0.363280	1.2:+77890621	MS.gene93862:CDS
CGTCATTGCTTCACCAATCA+AGG	0.390356	1.2:-77890611	None:intergenic
AGTTGCATTTCCAGATAAGA+TGG	0.401348	1.2:+77890900	MS.gene93862:CDS
AGTTGCATTTCAAGATAAGA+TGG	0.422713	1.2:+77891227	MS.gene93862:CDS
ACTTGTGTTTCAAGATAAGA+AGG	0.472355	1.2:+77890651	MS.gene93862:CDS
AGTTGTCAAAGATGGAGTTA+TGG	0.472541	1.2:+77890735	MS.gene93862:CDS
TTCAACATCTTCTTGCCAGC+AGG	0.472583	1.2:+77890793	MS.gene93862:CDS
AGTAGAACTAATCCCTTGAT+TGG	0.477123	1.2:+77890598	MS.gene93862:CDS
CTTCTATTCTTCTTGCCACC+AGG	0.488485	1.2:+77890829	MS.gene93862:CDS
GATAGAAGAGTTGTCAAAGA+TGG	0.492886	1.2:+77890727	MS.gene93862:CDS
AATCAAGGGATTAGTTCTAC+TGG	0.506014	1.2:-77890596	None:intergenic
GAAACTCCTACATGATTTCA+GGG	0.508203	1.2:+77890693	MS.gene93862:CDS
ACACAAAATCTCACTTCCAT+TGG	0.512949	1.2:+77891392	MS.gene93862:CDS
ACACAAAATCTCACTTCCAT+TGG	0.514630	1.2:+77891065	MS.gene93862:CDS
GATGAACAACAAGGTGATGA+TGG	0.529706	1.2:+77891420	MS.gene93862:CDS
AACGAATTTGGGAATAGAAG+TGG	0.545086	1.2:-77890862	None:intergenic
GATGAACAACAAGGTGGAGA+TGG	0.545992	1.2:+77891093	MS.gene93862:CDS
TGAACTTCAAGTTGATGAAG+TGG	0.554268	1.2:+77891506	MS.gene93862:CDS
CTCAACACTTGGTTGCCAGC+AGG	0.555626	1.2:+77891369	MS.gene93862:CDS
GATGCTGAACAACAAGGTGA+TGG	0.558029	1.2:+77891468	MS.gene93862:CDS
ACGAATTTGGGAATAGAAGT+GGG	0.571692	1.2:-77890861	None:intergenic
AGTGGGATTTCATCTCCTGC+TGG	0.573929	1.2:-77890808	None:intergenic
TGTTGTTCATCACCATCCAA+TGG	0.575143	1.2:-77891081	None:intergenic
TGTTGTTCATCACCATCCAA+TGG	0.575143	1.2:-77891408	None:intergenic
GATGATGAACAACAAGGTGA+TGG	0.578290	1.2:+77891141	MS.gene93862:CDS
AGAAGTGGGAATTCATGTCC+TGG	0.583648	1.2:-77890847	None:intergenic
ACTCAACACTTGGTTGCCAG+TGG	0.586298	1.2:+77891041	MS.gene93862:CDS
GTCATTGCTTCACCAATCAA+GGG	0.590508	1.2:-77890610	None:intergenic
AAAATCTCACTTCCATTGGA+TGG	0.592611	1.2:+77891069	MS.gene93862:CDS
AAAATCTCACTTCCATTGGA+TGG	0.592611	1.2:+77891396	MS.gene93862:CDS
GGTGGCAAGAAGAATAGAAG+TGG	0.618772	1.2:-77890826	None:intergenic
TGAACAACAAGGTGATGGAT+CGG	0.624867	1.2:+77891146	MS.gene93862:CDS
CAGAAAGATGCTGAACAACA+AGG	0.627330	1.2:+77891462	MS.gene93862:CDS
CTCAACACTTGGTTGCCAGT+GGG	0.645795	1.2:+77891042	MS.gene93862:CDS
GTGGCAAGAAGAATAGAAGT+GGG	0.680483	1.2:-77890825	None:intergenic
AGTGGGAATTCATGTCCTGG+TGG	0.708807	1.2:-77890844	None:intergenic
CAGAATGATGATGAACAACA+AGG	0.749951	1.2:+77891135	MS.gene93862:CDS
GATGGTGATGAACAACAAGG+TGG	0.767576	1.2:+77891087	MS.gene93862:CDS
TTGGATGGTGATGAACAACA+AGG	0.791947	1.2:+77891084	MS.gene93862:CDS
TTGGATGGTGATGAACAACA+AGG	0.791947	1.2:+77891411	MS.gene93862:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AACTCTAAAATCAATTCTTT+TGG	-	chr1.2:77891295-77891314	None:intergenic	20.0%
!!!	AGACCATAAAAATTTACTTT+TGG	+	chr1.2:77891344-77891363	MS.gene93862:CDS	20.0%
!!!	GACCATAAAAATTTACTTTT+GGG	+	chr1.2:77891345-77891364	MS.gene93862:CDS	20.0%
!!	AACTCTCATATCAATTCTTT+TGG	-	chr1.2:77890968-77890987	None:intergenic	25.0%
!!	AACTCTTCTATCAATTCTTT+TGG	-	chr1.2:77890719-77890738	None:intergenic	25.0%
!!	AGACCATAAAGATTTACTTT+TGG	+	chr1.2:77891017-77891036	MS.gene93862:CDS	25.0%
!!	GTCCCAAAAGTAAATTTTTA+TGG	-	chr1.2:77891350-77891369	None:intergenic	25.0%
!!!	GACCATAAAGATTTACTTTT+GGG	+	chr1.2:77891018-77891037	MS.gene93862:CDS	25.0%
!!!	GATTTTAGAGTTTTCAAAGA+AGG	+	chr1.2:77891303-77891322	MS.gene93862:CDS	25.0%
	ACTTGTGTTTCAAGATAAGA+AGG	+	chr1.2:77890651-77890670	MS.gene93862:CDS	30.0%
	AGTTGCATTTCAAGATAAGA+TGG	+	chr1.2:77891227-77891246	MS.gene93862:CDS	30.0%
	GTCCCAAAAGTAAATCTTTA+TGG	-	chr1.2:77891023-77891042	None:intergenic	30.0%
	TGAAGCAATGACGTTTATAA+AGG	+	chr1.2:77890621-77890640	MS.gene93862:CDS	30.0%
!	AGTTTTCAAAGAAGGAATGA+TGG	+	chr1.2:77890984-77891003	MS.gene93862:CDS	30.0%
!	GATATGAGAGTTTTCAAAGA+AGG	+	chr1.2:77890976-77890995	MS.gene93862:CDS	30.0%
!	TAGAGTTTTCAAAGAAGGAA+TGG	+	chr1.2:77891308-77891327	MS.gene93862:CDS	30.0%
!	TCATACTTTTCCATCTTATC+TGG	-	chr1.2:77890913-77890932	None:intergenic	30.0%
	AAAATCTCACTTCCATTGGA+TGG	+	chr1.2:77891069-77891088	MS.gene93862:CDS	35.0%
	AACGAATTTGGGAATAGAAG+TGG	-	chr1.2:77890865-77890884	None:intergenic	35.0%
	ACACAAAATCTCACTTCCAT+TGG	+	chr1.2:77891065-77891084	MS.gene93862:CDS	35.0%
	ACGAATTTGGGAATAGAAGT+GGG	-	chr1.2:77890864-77890883	None:intergenic	35.0%
	AGTAGAACTAATCCCTTGAT+TGG	+	chr1.2:77890598-77890617	MS.gene93862:CDS	35.0%
	AGTTGCATTTCCAGATAAGA+TGG	+	chr1.2:77890900-77890919	MS.gene93862:CDS	35.0%
	AGTTGTCAAAGATGGAGTTA+TGG	+	chr1.2:77890735-77890754	MS.gene93862:CDS	35.0%
	GAAACTCCTACATGATTTCA+GGG	+	chr1.2:77890693-77890712	MS.gene93862:CDS	35.0%
	GATAGAAGAGTTGTCAAAGA+TGG	+	chr1.2:77890727-77890746	MS.gene93862:CDS	35.0%
	TGAAACTCCTACATGATTTC+AGG	+	chr1.2:77890692-77890711	MS.gene93862:CDS	35.0%
!	AGTTTTCAAAGAAGGAATGG+TGG	+	chr1.2:77891311-77891330	MS.gene93862:CDS	35.0%
!	CAGAATGATGATGAACAACA+AGG	+	chr1.2:77891135-77891154	MS.gene93862:CDS	35.0%
!!	AATCAAGGGATTAGTTCTAC+TGG	-	chr1.2:77890599-77890618	None:intergenic	35.0%
!!	TGAACTTCAAGTTGATGAAG+TGG	+	chr1.2:77891506-77891525	MS.gene93862:CDS	35.0%
	ACTGCTGTTGCAAACGAATT+TGG	-	chr1.2:77890877-77890896	None:intergenic	40.0%
	CAGAAAGATGCTGAACAACA+AGG	+	chr1.2:77891462-77891481	MS.gene93862:CDS	40.0%
	CTGCTGTTGCAAACGAATTT+GGG	-	chr1.2:77890876-77890895	None:intergenic	40.0%
	GATGAACAACAAGGTGATGA+TGG	+	chr1.2:77891420-77891439	MS.gene93862:CDS	40.0%
	GATGATGAACAACAAGGTGA+TGG	+	chr1.2:77891141-77891160	MS.gene93862:CDS	40.0%
	GTCATTGCTTCACCAATCAA+GGG	-	chr1.2:77890613-77890632	None:intergenic	40.0%
	GTGGCAAGAAGAATAGAAGT+GGG	-	chr1.2:77890828-77890847	None:intergenic	40.0%
	TGTTGTTCATCACCATCCAA+TGG	-	chr1.2:77891084-77891103	None:intergenic	40.0%
!	TTGGATGGTGATGAACAACA+AGG	+	chr1.2:77891084-77891103	MS.gene93862:CDS	40.0%
!	TTTTGGCCCTGAAATCATGT+AGG	-	chr1.2:77890702-77890721	None:intergenic	40.0%
!!	TGAACAACAAGGTGATGGAT+CGG	+	chr1.2:77891146-77891165	MS.gene93862:CDS	40.0%
!!!	TACTTTTGGGACTCAACACT+TGG	+	chr1.2:77891031-77891050	MS.gene93862:CDS	40.0%
	AGAAGTGGGAATTCATGTCC+TGG	-	chr1.2:77890850-77890869	None:intergenic	45.0%
	CGTCATTGCTTCACCAATCA+AGG	-	chr1.2:77890614-77890633	None:intergenic	45.0%
	CTTCTATTCTTCTTGCCACC+AGG	+	chr1.2:77890829-77890848	MS.gene93862:CDS	45.0%
	GATGAACAACAAGGTGGAGA+TGG	+	chr1.2:77891093-77891112	MS.gene93862:CDS	45.0%
	GATGCTGAACAACAAGGTGA+TGG	+	chr1.2:77891468-77891487	MS.gene93862:CDS	45.0%
	GGTGGCAAGAAGAATAGAAG+TGG	-	chr1.2:77890829-77890848	None:intergenic	45.0%
	TTCAACATCTTCTTGCCAGC+AGG	+	chr1.2:77890793-77890812	MS.gene93862:CDS	45.0%
!	AGTGAGATTTTGTGTCCCAC+TGG	-	chr1.2:77891060-77891079	None:intergenic	45.0%
!	AGTGAGATTTTGTGTCCTGC+TGG	-	chr1.2:77891387-77891406	None:intergenic	45.0%
!	GATGGTGATGAACAACAAGG+TGG	+	chr1.2:77891087-77891106	MS.gene93862:CDS	45.0%
	ACTCAACACTTGGTTGCCAG+TGG	+	chr1.2:77891041-77891060	MS.gene93862:CDS	50.0%
	AGTGGGAATTCATGTCCTGG+TGG	-	chr1.2:77890847-77890866	None:intergenic	50.0%
	AGTGGGATTTCATCTCCTGC+TGG	-	chr1.2:77890811-77890830	None:intergenic	50.0%
	CTCAACACTTGGTTGCCAGT+GGG	+	chr1.2:77891042-77891061	MS.gene93862:CDS	50.0%
	CTCAACACTTGGTTGCCAGC+AGG	+	chr1.2:77891369-77891388	MS.gene93862:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	77890586	77891569	77890586	ID=MS.gene93862
chr1.2	mRNA	77890586	77891569	77890586	ID=MS.gene93862.t1;Parent=MS.gene93862
chr1.2	exon	77890586	77891569	77890586	ID=MS.gene93862.t1.exon1;Parent=MS.gene93862.t1
chr1.2	CDS	77890586	77891569	77890586	ID=cds.MS.gene93862.t1;Parent=MS.gene93862.t1

Gene Sequence

>MS.gene93862

ATGAACAGCTCCAGTAGAACTAATCCCTTGATTGGTGAAGCAATGACGTTTATAAAGGATGTAAAACTTGTGTTTCAAGATAAGAAGGAAAAGTTTAATGAATTCATGAAACTCCTACATGATTTCAGGGCCAAAAGAATTGATAGAAGAGTTGTCAAAGATGGAGTTATGGAGTTGTTGAAAGAACATCAAGATTTAATTTCAAGATTCAACATCTTCTTGCCAGCAGGAGATGAAATCCCACTTCTATTCTTCTTGCCACCAGGACATGAATTCCCACTTCTATTCCCAAATTCGTTTGCAACAGCAGTTAAAGTTGCATTTCCAGATAAGATGGAAAAGTATGATGAATTCTTGAAACTCGTAGTTGATTGCAATGCCAAAAGAATTGATATGAGAGTTTTCAAAGAAGGAATGATGGAGTTGTTTAAAGACCATAAAGATTTACTTTTGGGACTCAACACTTGGTTGCCAGTGGGACACAAAATCTCACTTCCATTGGATGGTGATGAACAACAAGGTGGAGATGGATTAGAGTTGAAAGATGCACAGAATGATGATGAACAACAAGGTGATGGATCGGCGCTCAAAGATGAATCAGCACTCGCAGATGCAACAAAGTCGTTTGCAACAGCAGTTAAAGTTGCATTTCAAGATAAGATGGATAAGTATGATGAATTCTTAAAACTCATAATTGATTGTCGTACCAAAAGAATTGATTTTAGAGTTTTCAAAGAAGGAATGGTGGAGTTGTTTAAAGACCATAAAAATTTACTTTTGGGACTCAACACTTGGTTGCCAGCAGGACACAAAATCTCACTTCCATTGGATGGTGATGAACAACAAGGTGATGATGGATTAGAGTTGAAAGATGCACAGAAAGATGCTGAACAACAAGGTGATGGATTAGAGTACAAAGATGAACTTCAAGTTGATGAAGTGGCACTCAAACTCAAAAATGAGCAGAAAGATGACGAACAATAA

Protein sequence

>MS.gene93862.t1

MNSSSRTNPLIGEAMTFIKDVKLVFQDKKEKFNEFMKLLHDFRAKRIDRRVVKDGVMELLKEHQDLISRFNIFLPAGDEIPLLFFLPPGHEFPLLFPNSFATAVKVAFPDKMEKYDEFLKLVVDCNAKRIDMRVFKEGMMELFKDHKDLLLGLNTWLPVGHKISLPLDGDEQQGGDGLELKDAQNDDEQQGDGSALKDESALADATKSFATAVKVAFQDKMDKYDEFLKLIIDCRTKRIDFRVFKEGMVELFKDHKNLLLGLNTWLPAGHKISLPLDGDEQQGDDGLELKDAQKDAEQQGDGLEYKDELQVDEVALKLKNEQKDDEQ