AlfalfaGEDB | MS.gene80087

M. sativa cultivar XinJiangDaYe / MS.gene80087

KEGG: K11644
GO: GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:1903506 GO:2000112 GO:2001141
PFAM: PF02671.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80087.t1	XP_003592441.1	68.2	179	51	1	1	179	1	173	2.50E-60	241.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80087.t1	O04539	37.7	167	99	1	1	167	2	163	6.8e-22	105.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80087.t1	G7IE22	68.2	179	51	1	1	179	1	173	1.8e-60	241.9

TFs/TRs:

Gene ID	Type	Classification
MS.gene80087.t1	TR	Others

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene80087	MS.gene43439	PPI
MS.gene80087	MS.gene60770	PPI
MS.gene80087	MS.gene012752	PPI
MS.gene80087	MS.gene91422	PPI
MS.gene80088	MS.gene80087	PPI
MS.gene91421	MS.gene80087	PPI
MS.gene80087	MS.gene80088	PPI
MS.gene85574	MS.gene80087	PPI
MS.gene80087	MS.gene93863	PPI
MS.gene80087	MS.gene93862	PPI
MS.gene80087	MS.gene95089	PPI
MS.gene80087	MS.gene80089	PPI
MS.gene99644	MS.gene80087	PPI
MS.gene80087	MS.gene93864	PPI
MS.gene91330	MS.gene80087	PPI
MS.gene80087	MS.gene91421	PPI
MS.gene80087	MS.gene99644	PPI
MS.gene60770	MS.gene80087	PPI
MS.gene80087	MS.gene71600	PPI
MS.gene80087	MS.gene99643	PPI
MS.gene80089	MS.gene80087	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80087.t1	MTR_1g104960	68.156	179	51	1	1	179	1	173	2.11e-81	239
MS.gene80087.t1	MTR_1g104960	62.245	98	36	1	93	190	2	98	5.31e-31	111
MS.gene80087.t1	MTR_1g104960	61.333	75	29	0	14	88	100	174	1.40e-25	97.8
MS.gene80087.t1	MTR_1g104980	64.467	197	35	3	15	197	1	176	2.51e-78	232
MS.gene80087.t1	MTR_4g133300	45.783	166	81	1	13	178	89	245	1.05e-40	139
MS.gene80087.t1	MTR_4g133300	40.314	191	96	4	1	190	1	174	5.12e-28	105
MS.gene80087.t1	MTR_1g104950	75.269	93	9	2	36	126	1	81	6.45e-40	131
MS.gene80087.t1	MTR_1g104950	67.797	59	17	1	128	184	1	59	1.31e-18	77.0
MS.gene80087.t1	MTR_4g133470	46.108	167	79	3	13	178	89	245	6.02e-39	134
MS.gene80087.t1	MTR_4g133470	41.146	192	93	6	1	190	1	174	2.03e-27	104
MS.gene80087.t1	MTR_3g006125	44.886	176	83	4	11	179	87	255	8.23e-37	129
MS.gene80087.t1	MTR_3g006125	45.745	94	45	2	103	190	87	180	5.72e-14	68.6
MS.gene80087.t1	MTR_1g104937	60.215	93	37	0	6	98	5	97	7.37e-36	122
MS.gene80087.t1	MTR_1g104937	63.441	93	34	0	101	193	8	100	1.32e-33	116
MS.gene80087.t1	MTR_1g104940	61.957	92	35	0	105	196	14	105	1.02e-34	119
MS.gene80087.t1	MTR_1g104940	62.069	87	33	0	12	98	13	99	7.28e-32	112
MS.gene80087.t1	MTR_1g105955	38.953	172	92	1	2	173	5	163	8.77e-34	119
MS.gene80087.t1	MTR_3g006185	42.105	171	94	3	11	179	6	173	1.79e-33	117
MS.gene80087.t1	MTR_3g006185	47.312	93	44	2	103	190	6	98	1.01e-13	66.6
MS.gene80087.t1	MTR_3g006105	42.045	176	88	4	11	179	6	174	3.81e-32	114
MS.gene80087.t1	MTR_3g006105	47.872	94	43	2	103	190	6	99	4.43e-17	75.9
MS.gene80087.t1	MTR_3g006150	42.262	168	86	3	8	174	3	160	9.45e-32	113
MS.gene80087.t1	MTR_3g006150	47.674	86	42	1	105	190	8	90	4.10e-18	77.8
MS.gene80087.t1	MTR_3g006150	47.368	76	37	2	4	78	83	156	4.33e-11	59.3
MS.gene80087.t1	MTR_3g006065	41.040	173	89	4	12	181	7	169	1.07e-29	108
MS.gene80087.t1	MTR_3g006065	44.186	86	45	1	105	190	8	90	1.34e-14	69.3
MS.gene80087.t1	MTR_5g036670	40.625	160	89	1	8	167	38	191	3.27e-29	114
MS.gene80087.t1	MTR_5g036670	50.633	79	38	1	103	181	41	118	4.72e-18	82.0
MS.gene80087.t1	MTR_8g062700	38.125	160	93	1	8	167	37	190	2.61e-26	105
MS.gene80087.t1	MTR_8g062700	52.174	92	42	2	91	181	27	117	5.81e-21	90.5
MS.gene80087.t1	MTR_8g062700	38.125	160	93	1	8	167	37	190	2.69e-26	105
MS.gene80087.t1	MTR_8g062700	52.174	92	42	2	91	181	27	117	5.59e-21	90.5
MS.gene80087.t1	MTR_7g013380	35.928	167	99	3	13	177	99	259	3.43e-25	99.8
MS.gene80087.t1	MTR_7g013380	35.196	179	104	3	1	175	1	171	3.80e-25	99.4
MS.gene80087.t1	MTR_7g013380	38.947	95	53	2	13	105	185	276	2.95e-12	64.3
MS.gene80087.t1	MTR_6g008970	36.875	160	95	1	8	167	58	211	3.09e-23	97.1
MS.gene80087.t1	MTR_6g008970	46.154	78	42	0	103	180	61	138	9.58e-15	72.4
MS.gene80087.t1	MTR_6g008995	35.484	155	92	1	13	167	37	183	1.48e-22	94.4
MS.gene80087.t1	MTR_6g008995	43.836	73	41	0	105	177	37	109	2.52e-13	67.8
MS.gene80087.t1	MTR_1g105960	48.052	77	40	0	106	182	2	78	1.15e-17	75.1
MS.gene80087.t1	MTR_1g105960	35.433	127	50	1	14	140	2	96	2.53e-17	74.3
MS.gene80087.t1	MTR_1g105010	50.000	82	36	1	97	173	3	84	1.31e-16	72.8
MS.gene80087.t1	MTR_1g105010	47.826	69	36	0	13	81	16	84	9.68e-14	65.1
MS.gene80087.t1	MTR_1g109550	34.722	144	78	2	10	153	13	140	2.02e-16	72.8
MS.gene80087.t1	MTR_1g109550	50.000	60	29	1	113	172	24	82	6.54e-11	58.2
MS.gene80087.t1	MTR_6g008995	33.835	133	80	1	35	167	2	126	4.89e-15	72.8
MS.gene80087.t1	MTR_8g062350	43.820	89	49	1	1	88	1	89	2.04e-14	68.9
MS.gene80087.t1	MTR_8g062350	40.964	83	47	1	104	186	13	93	2.73e-12	63.2
MS.gene80087.t1	MTR_7g013410	26.797	153	97	2	17	167	2	141	1.09e-13	65.9
MS.gene80087.t1	MTR_7g013410	45.455	66	36	0	110	175	3	68	5.11e-11	58.5
MS.gene80087.t1	MTR_3g006010	48.000	75	38	1	103	176	6	80	9.89e-13	66.2
MS.gene80087.t1	MTR_3g006010	44.000	75	41	1	11	84	6	80	2.19e-11	62.4
MS.gene80087.t1	MTR_1g093310	42.857	77	36	2	104	179	8	77	2.09e-12	60.5
MS.gene80087.t1	MTR_1g091047	50.746	67	32	1	104	169	8	74	2.45e-12	60.5
MS.gene80087.t1	MTR_2g097830	42.553	94	50	2	101	193	66	156	5.34e-12	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80087.t1	AT1G24200	36.025	161	94	1	8	168	9	160	1.00e-24	96.3
MS.gene80087.t1	AT1G24200	46.988	83	41	1	91	173	3	82	6.38e-17	75.5
MS.gene80087.t1	AT3G01320	36.782	174	97	3	4	175	46	208	1.45e-24	100
MS.gene80087.t1	AT1G70060	38.415	164	96	1	4	167	5	163	1.49e-24	100
MS.gene80087.t1	AT1G70060	50.000	72	36	0	103	174	12	83	1.57e-15	74.7
MS.gene80087.t1	AT1G70060	38.415	164	96	1	4	167	5	163	1.49e-24	100
MS.gene80087.t1	AT1G70060	50.000	72	36	0	103	174	12	83	1.57e-15	74.7
MS.gene80087.t1	AT3G01320	36.782	174	97	3	4	175	46	208	1.71e-24	100
MS.gene80087.t1	AT1G24190	36.207	174	94	3	8	175	9	171	4.38e-23	96.7
MS.gene80087.t1	AT1G24190	46.429	84	42	1	91	174	3	83	6.83e-16	75.9
MS.gene80087.t1	AT1G24190	36.207	174	94	3	8	175	9	171	4.56e-23	96.7
MS.gene80087.t1	AT1G24190	46.429	84	42	1	91	174	3	83	7.10e-16	75.9
MS.gene80087.t1	AT1G24190	36.207	174	94	3	8	175	9	171	4.78e-23	96.3
MS.gene80087.t1	AT1G24190	46.429	84	42	1	91	174	3	83	6.65e-16	75.9
MS.gene80087.t1	AT1G27260	37.209	172	105	2	14	185	4	172	6.42e-23	92.0
MS.gene80087.t1	AT1G23810	32.386	176	115	3	13	185	14	188	9.69e-23	92.0
MS.gene80087.t1	AT1G23810	30.233	129	83	2	3	131	99	220	2.97e-12	63.9
MS.gene80087.t1	AT5G15020	36.774	155	90	2	13	167	52	198	3.60e-22	94.0
MS.gene80087.t1	AT5G15020	45.833	72	39	0	103	174	50	121	5.30e-14	70.1
MS.gene80087.t1	AT5G15020	36.774	155	90	2	13	167	52	198	3.82e-22	94.0
MS.gene80087.t1	AT5G15020	45.833	72	39	0	103	174	50	121	5.41e-14	70.1
MS.gene80087.t1	AT1G24250	31.551	187	113	3	13	185	14	199	3.93e-22	90.5
MS.gene80087.t1	AT1G10450	33.129	163	101	2	9	171	80	234	8.34e-20	87.0
MS.gene80087.t1	AT1G10450	44.706	85	43	2	90	174	73	153	1.49e-13	68.9
MS.gene80087.t1	AT1G10450	33.129	163	101	2	9	171	29	183	1.11e-19	86.7
MS.gene80087.t1	AT1G10450	44.706	85	43	2	90	174	22	102	1.67e-13	68.9
MS.gene80087.t1	AT1G10450	33.129	163	101	2	9	171	29	183	1.11e-19	86.7
MS.gene80087.t1	AT1G10450	44.706	85	43	2	90	174	22	102	1.67e-13	68.9
MS.gene80087.t1	AT1G27280	33.537	164	105	2	24	187	4	163	9.12e-19	81.3
MS.gene80087.t1	AT1G70030	33.750	160	98	3	8	167	6	157	9.89e-19	79.3
MS.gene80087.t1	AT1G70030	43.836	73	41	0	105	177	11	83	1.04e-11	60.8
MS.gene80087.t1	AT1G24230	29.412	170	98	2	11	179	12	160	1.14e-18	81.3
MS.gene80087.t1	AT1G24230	26.316	152	95	3	13	160	86	224	4.06e-12	63.5
MS.gene80087.t1	AT1G59890	32.903	155	96	1	13	167	45	191	1.24e-18	83.6
MS.gene80087.t1	AT1G59890	47.143	70	37	0	105	174	45	114	8.40e-14	69.7
MS.gene80087.t1	AT1G59890	32.903	155	96	1	13	167	45	191	1.28e-18	83.6
MS.gene80087.t1	AT1G59890	47.143	70	37	0	105	174	45	114	8.63e-14	69.7
MS.gene80087.t1	AT1G59890	32.903	155	96	1	13	167	45	191	1.29e-18	83.6
MS.gene80087.t1	AT1G59890	47.143	70	37	0	105	174	45	114	8.55e-14	69.7
MS.gene80087.t1	AT1G59890	32.903	155	96	1	13	167	45	191	1.29e-18	83.6
MS.gene80087.t1	AT1G59890	47.143	70	37	0	105	174	45	114	8.47e-14	69.7
MS.gene80087.t1	AT1G27270	34.783	161	98	3	13	166	14	174	2.37e-15	72.4
MS.gene80087.t1	AT1G70030	36.434	129	73	3	8	134	17	138	3.22e-14	67.0
MS.gene80087.t1	AT1G70030	44.286	70	39	0	105	174	22	91	8.17e-12	60.8
MS.gene80087.t1	AT1G27220	43.243	74	42	0	8	81	9	82	7.96e-14	67.0
MS.gene80087.t1	AT1G27220	38.202	89	52	1	91	179	3	88	6.59e-13	64.7
MS.gene80087.t1	AT5G15040	40.260	77	46	0	105	181	3	79	3.69e-13	62.8
MS.gene80087.t1	AT5G15040	35.227	88	55	1	11	98	1	86	7.19e-11	57.0
MS.gene80087.t1	AT5G15040	40.260	77	46	0	105	181	3	79	3.69e-13	62.8
MS.gene80087.t1	AT5G15040	35.227	88	55	1	11	98	1	86	7.19e-11	57.0
MS.gene80087.t1	AT5G15040	40.260	77	46	0	105	181	3	79	3.69e-13	62.8
MS.gene80087.t1	AT5G15040	35.227	88	55	1	11	98	1	86	7.19e-11	57.0
MS.gene80087.t1	AT5G35610	47.500	80	39	1	113	192	18	94	4.68e-13	64.3
MS.gene80087.t1	AT5G35610	43.750	80	42	1	1	80	1	77	2.08e-11	60.1
MS.gene80087.t1	AT1G70030	36.607	112	64	2	8	119	17	121	5.73e-13	63.5
MS.gene80087.t1	AT1G70030	43.836	73	41	0	105	177	22	94	3.87e-12	61.2
MS.gene80087.t1	AT5G15025	37.209	86	54	0	2	87	36	121	4.06e-12	61.2
MS.gene80087.t1	AT1G24210	43.243	74	40	1	5	76	4	77	8.24e-11	58.5

Find 34 sgRNAs with CRISPR-Local

Find 39 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACTCTTATATCAATTCTTT+TGG	0.302742	1.1:-75189913	None:intergenic
AGAGCATCAAGATTTACTTT+TGG	0.331136	1.1:+75189965	MS.gene80087:CDS
AGTTGTCAAAGAAGGAGTTA+TGG	0.423391	1.1:+75189656	MS.gene80087:CDS
AACTTGTGTTTCAAGATAAG+AGG	0.425933	1.1:+75189571	MS.gene80087:CDS
AAGTTGCATTTCAAAATAAG+AGG	0.445054	1.1:+75189847	MS.gene80087:CDS
TGATGCAATGGAGTTTATAA+AGG	0.447186	1.1:+75189542	MS.gene80087:CDS
AATAAAAGAGTTGTCAAAGA+AGG	0.468195	1.1:+75189648	MS.gene80087:CDS
AGTTGTCAAAGAAGGAGTGA+TGG	0.486303	1.1:+75189932	MS.gene80087:CDS
TGAAATCTCATTTCCATTGG+AGG	0.501735	1.1:+75189740	MS.gene80087:CDS
ACATGAAATCTCATTTCCAT+TGG	0.503318	1.1:+75189737	MS.gene80087:CDS
CTCAACACTTTCTTGCCAGC+GGG	0.511799	1.1:+75189990	MS.gene80087:CDS
GATATAAGAGTTGTCAAAGA+AGG	0.512296	1.1:+75189924	MS.gene80087:CDS
GATGGATCAGTGCTCAAAGA+TGG	0.516579	1.1:+75189780	MS.gene80087:CDS
TTCAACATCTTCTTGCCACC+AGG	0.516818	1.1:+75189714	MS.gene80087:CDS
GATGATCAACAACGAGGTGA+TGG	0.517956	1.1:+75189762	MS.gene80087:CDS
ACACGAAATCTCACTTCCAT+TGG	0.519367	1.1:+75190013	MS.gene80087:CDS
ACTTGTGTTTCAAGATAAGA+GGG	0.530583	1.1:+75189572	MS.gene80087:CDS
AGGTGATGGATTAACATTCA+AGG	0.537891	1.1:+75190052	MS.gene80087:CDS
AGTGAGATTTCGTGTCCCGC+TGG	0.542973	1.1:-75190005	None:intergenic
ATTGCTTCATCTATGAGTGC+TGG	0.548558	1.1:-75189804	None:intergenic
AGTTGCATTTCAAAATAAGA+GGG	0.555199	1.1:+75189848	MS.gene80087:CDS
CTCCAGAAGAACAAAACCCT+TGG	0.559303	1.1:+75189515	MS.gene80087:CDS
TGTTGTTCATCAATATCCAA+TGG	0.559496	1.1:-75190029	None:intergenic
CTCCATTGCATCACCAACCA+AGG	0.561324	1.1:-75189532	None:intergenic
ATTGATGAACAACAAGGTGA+TGG	0.570660	1.1:+75190038	MS.gene80087:CDS
ACCCTTGGTTGGTGATGCAA+TGG	0.572570	1.1:+75189530	MS.gene80087:CDS
CGTTGTTGATCATCCTCCAA+TGG	0.582098	1.1:-75189753	None:intergenic
AGAAGAACAAAACCCTTGGT+TGG	0.585689	1.1:+75189519	MS.gene80087:CDS
GGAAATGAGATTTCATGTCC+TGG	0.602274	1.1:-75189732	None:intergenic
ACTCAACACTTTCTTGCCAG+CGG	0.612834	1.1:+75189989	MS.gene80087:CDS
TCCATTGCATCACCAACCAA+GGG	0.622798	1.1:-75189531	None:intergenic
TTGGATATTGATGAACAACA+AGG	0.734900	1.1:+75190032	MS.gene80087:CDS
AATGAGATTTCATGTCCTGG+TGG	0.753374	1.1:-75189729	None:intergenic
TTGGAGGATGATCAACAACG+AGG	0.806393	1.1:+75189756	MS.gene80087:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AACTCTTTTATTAATTCTTT+TGG	-	chr1.1:75189640-75189659	None:intergenic	15.0%
!!!	AACTCTTATATCAATTCTTT+TGG	-	chr1.1:75189916-75189935	None:intergenic	20.0%
!	AAGTTGCATTTCAAAATAAG+AGG	+	chr1.1:75189847-75189866	MS.gene80087:CDS	25.0%
!	AATAAAAGAGTTGTCAAAGA+AGG	+	chr1.1:75189648-75189667	MS.gene80087:CDS	25.0%
!	AGTTGCATTTCAAAATAAGA+GGG	+	chr1.1:75189848-75189867	MS.gene80087:CDS	25.0%
	AACTTGTGTTTCAAGATAAG+AGG	+	chr1.1:75189571-75189590	MS.gene80087:CDS	30.0%
	ACATGAAATCTCATTTCCAT+TGG	+	chr1.1:75189737-75189756	MS.gene80087:CDS	30.0%
	ACTTGTGTTTCAAGATAAGA+GGG	+	chr1.1:75189572-75189591	MS.gene80087:CDS	30.0%
	GATATAAGAGTTGTCAAAGA+AGG	+	chr1.1:75189924-75189943	MS.gene80087:CDS	30.0%
	TGATGCAATGGAGTTTATAA+AGG	+	chr1.1:75189542-75189561	MS.gene80087:CDS	30.0%
	TGTTGTTCATCAATATCCAA+TGG	-	chr1.1:75190032-75190051	None:intergenic	30.0%
	TTGGATATTGATGAACAACA+AGG	+	chr1.1:75190032-75190051	MS.gene80087:CDS	30.0%
!	TTTTGGCATTGTAATCAACT+AGG	-	chr1.1:75189899-75189918	None:intergenic	30.0%
!!	AGAGCATCAAGATTTACTTT+TGG	+	chr1.1:75189965-75189984	MS.gene80087:CDS	30.0%
!!	GAGCATCAAGATTTACTTTT+GGG	+	chr1.1:75189966-75189985	MS.gene80087:CDS	30.0%
	AGTTGTCAAAGAAGGAGTTA+TGG	+	chr1.1:75189656-75189675	MS.gene80087:CDS	35.0%
	ATTGATGAACAACAAGGTGA+TGG	+	chr1.1:75190038-75190057	MS.gene80087:CDS	35.0%
	TGAAATCTCATTTCCATTGG+AGG	+	chr1.1:75189740-75189759	MS.gene80087:CDS	35.0%
!	TTTTGGCACTGTAATCATGT+AGG	-	chr1.1:75189623-75189642	None:intergenic	35.0%
!!	AGGTGATGGATTAACATTCA+AGG	+	chr1.1:75190052-75190071	MS.gene80087:CDS	35.0%
	AATGAGATTTCATGTCCTGG+TGG	-	chr1.1:75189732-75189751	None:intergenic	40.0%
	ACACGAAATCTCACTTCCAT+TGG	+	chr1.1:75190013-75190032	MS.gene80087:CDS	40.0%
	AGAAGAACAAAACCCTTGGT+TGG	+	chr1.1:75189519-75189538	MS.gene80087:CDS	40.0%
	AGTTGTCAAAGAAGGAGTGA+TGG	+	chr1.1:75189932-75189951	MS.gene80087:CDS	40.0%
	ATTGCTTCATCTATGAGTGC+TGG	-	chr1.1:75189807-75189826	None:intergenic	40.0%
	GGAAATGAGATTTCATGTCC+TGG	-	chr1.1:75189735-75189754	None:intergenic	40.0%
!!!	AACCAAGGGTTTTGTTCTTC+TGG	-	chr1.1:75189520-75189539	None:intergenic	40.0%
	ACTCAACACTTTCTTGCCAG+CGG	+	chr1.1:75189989-75190008	MS.gene80087:CDS	45.0%
	CGTTGTTGATCATCCTCCAA+TGG	-	chr1.1:75189756-75189775	None:intergenic	45.0%
	CTCCAGAAGAACAAAACCCT+TGG	+	chr1.1:75189515-75189534	MS.gene80087:CDS	45.0%
	GATGATCAACAACGAGGTGA+TGG	+	chr1.1:75189762-75189781	MS.gene80087:CDS	45.0%
	GATGGATCAGTGCTCAAAGA+TGG	+	chr1.1:75189780-75189799	MS.gene80087:CDS	45.0%
	TCCATTGCATCACCAACCAA+GGG	-	chr1.1:75189534-75189553	None:intergenic	45.0%
	TTCAACATCTTCTTGCCACC+AGG	+	chr1.1:75189714-75189733	MS.gene80087:CDS	45.0%
	TTGGAGGATGATCAACAACG+AGG	+	chr1.1:75189756-75189775	MS.gene80087:CDS	45.0%
	CTCAACACTTTCTTGCCAGC+GGG	+	chr1.1:75189990-75190009	MS.gene80087:CDS	50.0%
	CTCCATTGCATCACCAACCA+AGG	-	chr1.1:75189535-75189554	None:intergenic	50.0%
!!	ACCCTTGGTTGGTGATGCAA+TGG	+	chr1.1:75189530-75189549	MS.gene80087:CDS	50.0%
	AGTGAGATTTCGTGTCCCGC+TGG	-	chr1.1:75190008-75190027	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	75189507	75190100	75189507	ID=MS.gene80087
chr1.1	mRNA	75189507	75190100	75189507	ID=MS.gene80087.t1;Parent=MS.gene80087
chr1.1	exon	75189507	75190100	75189507	ID=MS.gene80087.t1.exon1;Parent=MS.gene80087.t1
chr1.1	CDS	75189507	75190100	75189507	ID=cds.MS.gene80087.t1;Parent=MS.gene80087.t1

Gene Sequence

>MS.gene80087

ATGAACAGCTCCAGAAGAACAAAACCCTTGGTTGGTGATGCAATGGAGTTTATAAAGGATGTAAAACTTGTGTTTCAAGATAAGAGGGAAAAGTTTGATGAATTCATGAAACTCCTACATGATTACAGTGCCAAAAGAATTAATAAAAGAGTTGTCAAAGAAGGAGTTATGGAGTTGTTGAAAGAACATCAAGATTTAATTTCAAGATTCAACATCTTCTTGCCACCAGGACATGAAATCTCATTTCCATTGGAGGATGATCAACAACGAGGTGATGGATCAGTGCTCAAAGATGGACCAGCACTCATAGATGAAGCAATGTCGCTTGTAACAGCAGTTAAAGTTGCATTTCAAAATAAGAGGGAAAAGTATGATGAATTCTTGAAACTCCTAGTTGATTACAATGCCAAAAGAATTGATATAAGAGTTGTCAAAGAAGGAGTGATGGAGTTGTTTAAAGAGCATCAAGATTTACTTTTGGGACTCAACACTTTCTTGCCAGCGGGACACGAAATCTCACTTCCATTGGATATTGATGAACAACAAGGTGATGGATTAACATTCAAGGATGAACAGAAAGATGATGAGCAATAA

Protein sequence

>MS.gene80087.t1

MNSSRRTKPLVGDAMEFIKDVKLVFQDKREKFDEFMKLLHDYSAKRINKRVVKEGVMELLKEHQDLISRFNIFLPPGHEISFPLEDDQQRGDGSVLKDGPALIDEAMSLVTAVKVAFQNKREKYDEFLKLLVDYNAKRIDIRVVKEGVMELFKEHQDLLLGLNTFLPAGHEISLPLDIDEQQGDGLTFKDEQKDDEQ