AlfalfaGEDB | MS.gene93863

M. sativa cultivar XinJiangDaYe / MS.gene93863

KEGG: K11644
GO: GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:1903506 GO:2000112 GO:2001141
PFAM: PF02671.24 PF16545.8

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene93863.t1	XP_003592441.1	85.3	177	26	0	1	177	1	177	6.40E-78	300.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene93863.t1	O04539	34.4	189	104	3	12	180	13	201	5.1e-23	109.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene93863.t1	G7IE22	85.3	177	26	0	1	177	1	177	4.6e-78	300.8

TFs/TRs:

Gene ID	Type	Classification
MS.gene93863.t1	TR	Others

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene93863	MS.gene43439	PPI
MS.gene43439	MS.gene93863	PPI
MS.gene85574	MS.gene93863	PPI
MS.gene93864	MS.gene93863	PPI
MS.gene99643	MS.gene93863	PPI
MS.gene95089	MS.gene93863	PPI
MS.gene93862	MS.gene93863	PPI
MS.gene99644	MS.gene93863	PPI
MS.gene93863	MS.gene91422	PPI
MS.gene91330	MS.gene93863	PPI
MS.gene60770	MS.gene93863	PPI
MS.gene80087	MS.gene93863	PPI
MS.gene93863	MS.gene93862	PPI
MS.gene80089	MS.gene93863	PPI
MS.gene012752	MS.gene93863	PPI
MS.gene80088	MS.gene93863	PPI
MS.gene91421	MS.gene93863	PPI
MS.gene93863	MS.gene71600	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene93863.t1	MTR_1g104960	85.311	177	26	0	1	177	1	177	3.74e-104	300
MS.gene93863.t1	MTR_1g104960	71.687	166	47	0	94	259	8	173	1.44e-77	233
MS.gene93863.t1	MTR_1g104960	57.778	90	37	1	182	271	10	98	1.09e-24	97.8
MS.gene93863.t1	MTR_1g104980	56.545	191	55	2	101	278	1	176	3.35e-63	196
MS.gene93863.t1	MTR_1g104980	62.346	162	46	1	17	178	3	149	7.75e-63	196
MS.gene93863.t1	MTR_1g104980	58.442	77	32	0	16	92	73	149	9.83e-22	89.7
MS.gene93863.t1	MTR_4g133300	43.580	257	132	4	1	257	1	244	1.11e-58	187
MS.gene93863.t1	MTR_4g133300	43.713	167	85	2	96	262	9	166	3.76e-34	124
MS.gene93863.t1	MTR_4g133470	42.802	257	134	4	1	257	1	244	4.85e-56	181
MS.gene93863.t1	MTR_4g133470	44.048	168	83	4	96	262	9	166	3.78e-32	119
MS.gene93863.t1	MTR_1g105955	37.870	169	98	1	85	253	2	163	7.10e-35	124
MS.gene93863.t1	MTR_1g105955	40.964	166	91	2	2	167	5	163	3.45e-33	120
MS.gene93863.t1	MTR_1g105955	35.227	88	57	0	170	257	1	88	6.48e-13	66.2
MS.gene93863.t1	MTR_7g013380	31.203	266	173	6	1	260	1	262	2.91e-34	126
MS.gene93863.t1	MTR_3g006150	46.897	145	75	2	21	164	13	156	1.22e-32	117
MS.gene93863.t1	MTR_3g006150	42.675	157	85	3	99	254	8	160	6.05e-31	113
MS.gene93863.t1	MTR_3g006150	44.318	88	45	2	185	272	8	91	7.98e-14	68.2
MS.gene93863.t1	MTR_1g104950	67.059	85	24	2	36	120	1	81	2.64e-31	112
MS.gene93863.t1	MTR_1g104950	51.765	85	37	1	122	206	1	81	2.09e-20	83.6
MS.gene93863.t1	MTR_1g104950	51.429	70	24	1	208	277	1	60	3.81e-15	69.3
MS.gene93863.t1	MTR_3g006125	42.012	169	92	3	11	173	87	255	3.32e-31	117
MS.gene93863.t1	MTR_3g006125	38.323	167	97	3	99	259	89	255	5.66e-27	105
MS.gene93863.t1	MTR_3g006185	41.765	170	90	4	11	173	6	173	5.15e-31	114
MS.gene93863.t1	MTR_3g006185	40.120	167	93	4	99	259	8	173	2.87e-26	101
MS.gene93863.t1	MTR_3g006065	46.154	143	75	2	23	164	15	156	1.30e-30	113
MS.gene93863.t1	MTR_3g006065	39.759	166	93	4	99	261	8	169	1.18e-27	105
MS.gene93863.t1	MTR_3g006065	49.315	73	36	1	11	82	88	160	1.79e-11	62.0
MS.gene93863.t1	MTR_3g006105	41.317	167	91	4	11	171	6	171	2.50e-30	112
MS.gene93863.t1	MTR_3g006105	39.634	164	92	4	99	256	8	170	1.43e-26	102
MS.gene93863.t1	MTR_5g036670	39.869	153	92	0	11	163	41	193	3.43e-30	120
MS.gene93863.t1	MTR_5g036670	36.184	152	97	0	98	249	42	193	3.98e-28	114
MS.gene93863.t1	MTR_5g036670	44.304	79	44	0	184	262	42	120	1.02e-15	77.4
MS.gene93863.t1	MTR_1g104937	59.551	89	36	0	11	99	10	98	2.28e-29	107
MS.gene93863.t1	MTR_1g104937	56.322	87	38	0	99	185	12	98	3.13e-25	97.1
MS.gene93863.t1	MTR_1g104937	53.333	90	41	1	185	274	12	100	3.03e-23	92.0
MS.gene93863.t1	MTR_1g104940	55.000	100	44	1	1	99	1	100	1.62e-28	105
MS.gene93863.t1	MTR_1g104940	52.809	89	42	0	97	185	12	100	5.26e-26	99.4
MS.gene93863.t1	MTR_1g104940	53.684	95	43	1	183	277	12	105	5.91e-26	99.4
MS.gene93863.t1	MTR_8g062700	39.216	153	91	2	11	162	40	191	9.75e-26	107
MS.gene93863.t1	MTR_8g062700	37.500	152	93	2	98	248	41	191	7.64e-25	104
MS.gene93863.t1	MTR_8g062700	48.718	78	39	1	184	261	41	117	3.47e-16	79.0
MS.gene93863.t1	MTR_8g062700	39.216	153	91	2	11	162	40	191	9.84e-26	107
MS.gene93863.t1	MTR_8g062700	37.500	152	93	2	98	248	41	191	7.64e-25	104
MS.gene93863.t1	MTR_8g062700	48.718	78	39	1	184	261	41	117	3.41e-16	79.0
MS.gene93863.t1	MTR_6g008995	35.099	151	96	2	99	249	37	185	1.41e-23	99.8
MS.gene93863.t1	MTR_6g008995	36.025	161	100	3	3	163	28	185	4.51e-23	98.2
MS.gene93863.t1	MTR_6g008970	34.641	153	100	0	11	163	61	213	1.28e-21	95.1
MS.gene93863.t1	MTR_6g008970	32.237	152	103	0	98	249	62	213	4.15e-20	90.5
MS.gene93863.t1	MTR_6g008970	40.260	77	46	0	184	260	62	138	8.26e-12	65.9
MS.gene93863.t1	MTR_1g105960	46.250	80	43	0	186	265	2	81	1.61e-18	79.3
MS.gene93863.t1	MTR_1g105960	36.364	121	51	1	100	220	2	96	3.61e-18	78.6
MS.gene93863.t1	MTR_1g105960	34.711	121	53	1	14	134	2	96	8.00e-15	69.3
MS.gene93863.t1	MTR_1g109550	39.370	127	67	3	10	136	13	129	1.78e-18	80.1
MS.gene93863.t1	MTR_1g109550	36.296	135	76	3	88	222	5	129	2.84e-18	79.7
MS.gene93863.t1	MTR_2g097830	37.143	140	70	4	74	204	36	166	3.76e-18	80.1
MS.gene93863.t1	MTR_2g097830	41.176	119	58	4	1	118	59	166	1.25e-14	70.5
MS.gene93863.t1	MTR_6g008995	34.109	129	83	2	121	249	2	128	7.10e-18	83.2
MS.gene93863.t1	MTR_6g008995	36.434	129	80	2	35	163	2	128	3.35e-17	81.3
MS.gene93863.t1	MTR_7g013410	28.767	146	99	1	102	247	1	141	2.52e-17	77.0
MS.gene93863.t1	MTR_7g013410	28.276	145	99	1	17	161	2	141	1.50e-15	72.4
MS.gene93863.t1	MTR_8g062350	39.000	100	59	1	89	188	4	101	1.33e-15	73.9
MS.gene93863.t1	MTR_8g062350	40.659	91	52	1	12	102	13	101	9.36e-13	66.2
MS.gene93863.t1	MTR_8g062350	41.250	80	47	0	175	254	4	83	1.32e-12	65.5
MS.gene93863.t1	MTR_1g105010	50.000	70	35	0	98	167	15	84	2.42e-15	71.2
MS.gene93863.t1	MTR_1g105010	41.111	90	50	1	179	268	10	96	1.51e-13	66.2
MS.gene93863.t1	MTR_1g105010	46.479	71	38	0	11	81	14	84	1.84e-12	63.2
MS.gene93863.t1	MTR_3g006010	51.724	58	28	0	26	83	22	79	2.04e-11	64.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene93863.t1	AT1G24230	30.645	248	146	6	11	251	12	240	3.46e-28	108
MS.gene93863.t1	AT1G24230	36.196	163	88	2	98	259	13	160	7.74e-26	102
MS.gene93863.t1	AT1G27260	38.889	180	102	3	98	272	2	178	1.49e-26	103
MS.gene93863.t1	AT1G27260	35.096	208	130	3	11	214	1	207	1.85e-23	95.9
MS.gene93863.t1	AT1G27260	35.338	133	76	3	2	128	79	207	1.84e-12	65.5
MS.gene93863.t1	AT1G70060	38.562	153	93	1	11	162	12	164	1.21e-23	100
MS.gene93863.t1	AT1G70060	34.868	152	98	1	98	248	13	164	4.13e-22	96.3
MS.gene93863.t1	AT1G70060	43.662	71	40	0	184	254	13	83	4.95e-12	66.6
MS.gene93863.t1	AT1G70060	38.562	153	93	1	11	162	12	164	1.21e-23	100
MS.gene93863.t1	AT1G70060	34.868	152	98	1	98	248	13	164	4.13e-22	96.3
MS.gene93863.t1	AT1G70060	43.662	71	40	0	184	254	13	83	4.95e-12	66.6
MS.gene93863.t1	AT5G15020	37.013	154	93	2	11	163	50	200	2.77e-23	99.8
MS.gene93863.t1	AT5G15020	34.641	153	96	2	98	249	51	200	1.12e-22	98.2
MS.gene93863.t1	AT5G15020	42.254	71	41	0	184	254	51	121	9.37e-12	65.9
MS.gene93863.t1	AT5G15020	37.013	154	93	2	11	163	50	200	2.86e-23	99.8
MS.gene93863.t1	AT5G15020	34.641	153	96	2	98	249	51	200	1.17e-22	98.2
MS.gene93863.t1	AT5G15020	42.254	71	41	0	184	254	51	121	9.29e-12	65.9
MS.gene93863.t1	AT1G24200	35.294	153	96	2	95	247	10	159	7.24e-23	93.6
MS.gene93863.t1	AT1G24200	35.065	154	95	2	9	161	10	159	5.40e-20	85.9
MS.gene93863.t1	AT1G24200	42.857	70	40	0	184	253	13	82	2.45e-12	64.7
MS.gene93863.t1	AT1G10450	37.255	153	94	2	95	247	80	230	1.15e-22	98.2
MS.gene93863.t1	AT1G10450	34.375	192	109	4	8	184	79	268	2.79e-22	97.1
MS.gene93863.t1	AT1G10450	41.860	86	50	0	169	254	68	153	4.12e-13	69.7
MS.gene93863.t1	AT1G10450	37.255	153	94	2	95	247	29	179	1.20e-22	97.8
MS.gene93863.t1	AT1G10450	34.375	192	109	4	8	184	28	217	3.47e-22	96.7
MS.gene93863.t1	AT1G10450	41.860	86	50	0	169	254	17	102	4.24e-13	69.7
MS.gene93863.t1	AT1G10450	37.255	153	94	2	95	247	29	179	1.20e-22	97.8
MS.gene93863.t1	AT1G10450	34.375	192	109	4	8	184	28	217	3.47e-22	96.7
MS.gene93863.t1	AT1G10450	41.860	86	50	0	169	254	17	102	4.24e-13	69.7
MS.gene93863.t1	AT3G01320	34.810	158	98	2	98	255	56	208	1.72e-22	97.4
MS.gene93863.t1	AT3G01320	35.099	151	97	1	11	161	55	204	1.76e-21	94.7
MS.gene93863.t1	AT3G01320	34.810	158	98	2	98	255	56	208	2.08e-22	97.4
MS.gene93863.t1	AT3G01320	35.099	151	97	1	11	161	55	204	2.03e-21	94.4
MS.gene93863.t1	AT1G24190	33.690	187	113	3	11	191	12	193	3.98e-22	96.7
MS.gene93863.t1	AT1G24190	32.075	159	107	1	98	255	13	171	4.67e-21	93.2
MS.gene93863.t1	AT1G24190	42.105	76	43	1	184	258	13	88	4.55e-12	66.6
MS.gene93863.t1	AT1G24190	33.690	187	113	3	11	191	12	193	4.17e-22	96.3
MS.gene93863.t1	AT1G24190	32.075	159	107	1	98	255	13	171	4.67e-21	93.2
MS.gene93863.t1	AT1G24190	42.105	76	43	1	184	258	13	88	4.64e-12	66.6
MS.gene93863.t1	AT1G24190	33.690	187	113	3	11	191	12	193	4.21e-22	96.3
MS.gene93863.t1	AT1G24190	32.075	159	107	1	98	255	13	171	4.76e-21	93.2
MS.gene93863.t1	AT1G24190	42.105	76	43	1	184	258	13	88	4.69e-12	66.6
MS.gene93863.t1	AT1G24250	33.529	170	93	3	11	160	12	181	1.22e-21	91.7
MS.gene93863.t1	AT1G24250	47.826	69	36	0	6	74	113	181	1.47e-11	63.5
MS.gene93863.t1	AT1G23810	33.511	188	113	5	94	272	10	194	2.54e-21	90.5
MS.gene93863.t1	AT1G23810	31.148	183	117	3	2	175	3	185	3.35e-21	90.1
MS.gene93863.t1	AT1G59890	34.270	178	111	4	13	189	45	217	1.67e-20	91.7
MS.gene93863.t1	AT1G59890	33.333	153	94	2	99	248	45	192	9.53e-19	86.7
MS.gene93863.t1	AT1G59890	47.143	70	37	0	185	254	45	114	4.80e-13	69.7
MS.gene93863.t1	AT1G59890	34.270	178	111	4	13	189	45	217	1.69e-20	91.7
MS.gene93863.t1	AT1G59890	33.333	153	94	2	99	248	45	192	1.01e-18	86.7
MS.gene93863.t1	AT1G59890	47.143	70	37	0	185	254	45	114	5.00e-13	69.7
MS.gene93863.t1	AT1G59890	34.270	178	111	4	13	189	45	217	1.82e-20	91.7
MS.gene93863.t1	AT1G59890	33.333	153	94	2	99	248	45	192	1.06e-18	86.3
MS.gene93863.t1	AT1G59890	47.143	70	37	0	185	254	45	114	5.32e-13	69.3
MS.gene93863.t1	AT1G59890	34.270	178	111	4	13	189	45	217	1.84e-20	91.7
MS.gene93863.t1	AT1G59890	33.333	153	94	2	99	248	45	192	1.05e-18	86.3
MS.gene93863.t1	AT1G59890	47.143	70	37	0	185	254	45	114	5.23e-13	69.3
MS.gene93863.t1	AT1G27280	33.005	203	121	5	21	214	1	197	7.56e-20	86.3
MS.gene93863.t1	AT1G27280	34.247	146	82	2	110	247	4	143	3.56e-14	70.5
MS.gene93863.t1	AT1G70030	35.570	149	94	2	13	161	11	157	1.98e-19	83.2
MS.gene93863.t1	AT1G70030	34.899	149	95	2	99	247	11	157	3.21e-19	82.8
MS.gene93863.t1	AT1G27270	35.185	162	92	2	98	246	13	174	3.41e-16	76.3
MS.gene93863.t1	AT1G27270	34.568	162	93	3	12	160	13	174	2.74e-14	71.2
MS.gene93863.t1	AT1G27220	34.579	107	63	1	11	117	12	111	4.47e-15	72.0
MS.gene93863.t1	AT1G70030	37.288	118	71	2	99	214	22	138	3.71e-14	68.6
MS.gene93863.t1	AT1G70030	37.391	115	66	2	13	122	22	135	2.48e-12	63.5
MS.gene93863.t1	AT5G15025	41.975	81	47	0	2	82	36	116	5.33e-14	67.8
MS.gene93863.t1	AT1G24210	46.667	75	38	1	4	76	3	77	5.73e-14	68.6
MS.gene93863.t1	AT5G15040	41.558	77	43	1	13	89	3	77	3.15e-13	64.3
MS.gene93863.t1	AT5G15040	42.857	70	40	0	99	168	3	72	9.07e-13	63.2
MS.gene93863.t1	AT5G15040	42.857	70	40	0	185	254	3	72	4.98e-12	61.2
MS.gene93863.t1	AT5G15040	41.558	77	43	1	13	89	3	77	3.15e-13	64.3
MS.gene93863.t1	AT5G15040	42.857	70	40	0	99	168	3	72	9.07e-13	63.2
MS.gene93863.t1	AT5G15040	42.857	70	40	0	185	254	3	72	4.98e-12	61.2
MS.gene93863.t1	AT5G15040	41.558	77	43	1	13	89	3	77	3.15e-13	64.3
MS.gene93863.t1	AT5G15040	42.857	70	40	0	99	168	3	72	9.07e-13	63.2
MS.gene93863.t1	AT5G15040	42.857	70	40	0	185	254	3	72	4.98e-12	61.2
MS.gene93863.t1	AT1G70030	39.175	97	58	1	99	195	22	117	7.23e-13	64.7
MS.gene93863.t1	AT1G70030	39.175	97	58	1	13	109	22	117	5.27e-12	62.4
MS.gene93863.t1	AT1G27250	44.928	69	38	0	12	80	20	88	1.79e-12	63.9

Find 40 sgRNAs with CRISPR-Local

Find 51 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACTCTTACATCAATTCTTT+TGG	0.276802	1.2:-77886302	None:intergenic
AACTCTTACATCAATTCTTT+TGG	0.285232	1.2:-77886044	None:intergenic
GACTCTTCTATCAATTCTTT+TGG	0.310378	1.2:-77885786	None:intergenic
GTGAAACTCCTACAAGATTT+CGG	0.391833	1.2:+77885761	MS.gene93863:CDS
GGTTACATTTGAAGATAAGA+TGG	0.406022	1.2:+77885979	MS.gene93863:CDS
GGTTACATTTAAAGATAAGA+TGG	0.406022	1.2:+77886237	MS.gene93863:CDS
CGCCCTTGCATCGTCAATCA+AGG	0.416013	1.2:-77885681	None:intergenic
AGTTATGAAAGAAGGAATGA+TGG	0.450472	1.2:+77886321	MS.gene93863:CDS
AGTCGTCAAAGAAGGAGTTA+TGG	0.477577	1.2:+77885805	MS.gene93863:CDS
CGATGCAAGGGCGTTTGTAA+AGG	0.479094	1.2:+77885691	MS.gene93863:CDS
AGTTGTCAAAGAAGGAATGA+TGG	0.479247	1.2:+77886063	MS.gene93863:CDS
TTCCCTTGATTGACGATGCA+AGG	0.485508	1.2:+77885678	MS.gene93863:CDS
GGCAAGAAGATGTTGAATCT+TGG	0.485703	1.2:-77885857	None:intergenic
GGCAAGAAGGTGTTGAATCC+CGG	0.486543	1.2:-77886115	None:intergenic
AAGCTGTGTTTCATGATAAG+AGG	0.489654	1.2:+77885720	MS.gene93863:CDS
GATAGAAGAGTCGTCAAAGA+AGG	0.515587	1.2:+77885797	MS.gene93863:CDS
TTCAACATCTTCTTGCCACC+AGG	0.516818	1.2:+77885863	MS.gene93863:CDS
ACACAAAATCTCACTTCCAT+TGG	0.521284	1.2:+77886402	MS.gene93863:CDS
TGTTGTAGATCATCATCAAA+TGG	0.537798	1.2:-77885902	None:intergenic
GATGTAAGAGTTGTCAAAGA+AGG	0.540360	1.2:+77886055	MS.gene93863:CDS
GATGTAAGAGTTATGAAAGA+AGG	0.540360	1.2:+77886313	MS.gene93863:CDS
AGATAAGATGGAAATGTTCG+AGG	0.540381	1.2:+77886249	MS.gene93863:CDS
TGTTGTTCATCACCATCCAA+TGG	0.554632	1.2:-77886418	None:intergenic
ACACAAAATCTCAATTCCAT+TGG	0.554696	1.2:+77886144	MS.gene93863:CDS
TTTGTGTCCCTCTGGCAAGA+AGG	0.563533	1.2:-77886128	None:intergenic
TTTGTGTCCCTCTGGCAAGA+AGG	0.563533	1.2:-77886386	None:intergenic
TCCCTTGATTGACGATGCAA+GGG	0.568843	1.2:+77885679	MS.gene93863:CDS
TTCAACACCTTCTTGCCAGA+GGG	0.592249	1.2:+77886121	MS.gene93863:CDS
TTCAACACCTTCTTGCCAGA+GGG	0.592249	1.2:+77886379	MS.gene93863:CDS
AAAATCTCACTTCCATTGGA+TGG	0.592611	1.2:+77886406	MS.gene93863:CDS
GCCCTTGCATCGTCAATCAA+GGG	0.605668	1.2:-77885680	None:intergenic
TGTTGTAAATCATCAGCCAA+TGG	0.609984	1.2:-77886160	None:intergenic
ACCGCTCGAAGATGAAGCAA+TGG	0.613500	1.2:+77885937	MS.gene93863:CDS
GAGTTGAAAGATGCACAGAA+AGG	0.613537	1.2:+77886457	MS.gene93863:CDS
GGAAGTGAGATTTCATGTCC+TGG	0.614261	1.2:-77885881	None:intergenic
ACCATTGCTTCATCTTCGAG+CGG	0.637751	1.2:-77885938	None:intergenic
ATTCAACACCTTCTTGCCAG+AGG	0.655191	1.2:+77886120	MS.gene93863:CDS
ATTCAACACCTTCTTGCCAG+AGG	0.655191	1.2:+77886378	MS.gene93863:CDS
GATGAACAACAAGATGAAGA+CGG	0.657602	1.2:+77886430	MS.gene93863:CDS
AGTGAGATTTCATGTCCTGG+TGG	0.759321	1.2:-77885878	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AGACCATAAAAATTTACTTT+TGG	+	chr1.2:77886354-77886373	MS.gene93863:CDS	20.0%
!!!	ATCCCAAAAGTAAATTTTTA+TGG	-	chr1.2:77886360-77886379	None:intergenic	20.0%
!!!	GACCATAAAAATTTACTTTT+GGG	+	chr1.2:77886355-77886374	MS.gene93863:CDS	20.0%
!	AGACCATAAAAATTTACTTC+CGG	+	chr1.2:77886096-77886115	MS.gene93863:CDS	25.0%
!	GGTTACATTTAAAGATAAGA+TGG	+	chr1.2:77886237-77886256	MS.gene93863:CDS	25.0%
!!	AACTCTTACATCAATTCTTT+TGG	-	chr1.2:77886047-77886066	None:intergenic	25.0%
	ACACAAAATCTCAATTCCAT+TGG	+	chr1.2:77886144-77886163	MS.gene93863:CDS	30.0%
	AGTTATGAAAGAAGGAATGA+TGG	+	chr1.2:77886321-77886340	MS.gene93863:CDS	30.0%
	GACCATAAAAATTTACTTCC+GGG	+	chr1.2:77886097-77886116	MS.gene93863:CDS	30.0%
	GATGTAAGAGTTATGAAAGA+AGG	+	chr1.2:77886313-77886332	MS.gene93863:CDS	30.0%
	GGTTACATTTGAAGATAAGA+TGG	+	chr1.2:77885979-77885998	MS.gene93863:CDS	30.0%
	TGTTGTAGATCATCATCAAA+TGG	-	chr1.2:77885905-77885924	None:intergenic	30.0%
!	AACGTTTTTAACAGCAGTTA+AGG	+	chr1.2:77886216-77886235	MS.gene93863:CDS	30.0%
!	ATCCCGGAAGTAAATTTTTA+TGG	-	chr1.2:77886102-77886121	None:intergenic	30.0%
!	GACTCTTCTATCAATTCTTT+TGG	-	chr1.2:77885789-77885808	None:intergenic	30.0%
!	TTACATCAATTCTTTTGGCA+CGG	-	chr1.2:77886042-77886061	None:intergenic	30.0%
!	TTACATCAATTCTTTTGGCA+TGG	-	chr1.2:77886042-77886061	None:intergenic	30.0%
	AAAATCTCACTTCCATTGGA+TGG	+	chr1.2:77886406-77886425	MS.gene93863:CDS	35.0%
	AAGCTGTGTTTCATGATAAG+AGG	+	chr1.2:77885720-77885739	MS.gene93863:CDS	35.0%
	ACACAAAATCTCACTTCCAT+TGG	+	chr1.2:77886402-77886421	MS.gene93863:CDS	35.0%
	AGATAAGATGGAAATGTTCG+AGG	+	chr1.2:77886249-77886268	MS.gene93863:CDS	35.0%
	AGTTGTCAAAGAAGGAATGA+TGG	+	chr1.2:77886063-77886082	MS.gene93863:CDS	35.0%
	GATGAACAACAAGATGAAGA+CGG	+	chr1.2:77886430-77886449	MS.gene93863:CDS	35.0%
	GATGTAAGAGTTGTCAAAGA+AGG	+	chr1.2:77886055-77886074	MS.gene93863:CDS	35.0%
	GTGAAACTCCTACAAGATTT+CGG	+	chr1.2:77885761-77885780	MS.gene93863:CDS	35.0%
	TGTTGTAAATCATCAGCCAA+TGG	-	chr1.2:77886163-77886182	None:intergenic	35.0%
!!	GGTGTTTTTAACAGCAGTTA+AGG	+	chr1.2:77885958-77885977	MS.gene93863:CDS	35.0%
	AGTCGTCAAAGAAGGAGTTA+TGG	+	chr1.2:77885805-77885824	MS.gene93863:CDS	40.0%
	GAGTTGAAAGATGCACAGAA+AGG	+	chr1.2:77886457-77886476	MS.gene93863:CDS	40.0%
	GATAGAAGAGTCGTCAAAGA+AGG	+	chr1.2:77885797-77885816	MS.gene93863:CDS	40.0%
	GGCAAGAAGATGTTGAATCT+TGG	-	chr1.2:77885860-77885879	None:intergenic	40.0%
	TGTTGTTCATCACCATCCAA+TGG	-	chr1.2:77886421-77886440	None:intergenic	40.0%
!	ATTGAGATTTTGTGTCCCTC+TGG	-	chr1.2:77886139-77886158	None:intergenic	40.0%
!	TTTTGGCATGGTAATCAGCT+AGG	-	chr1.2:77886288-77886307	None:intergenic	40.0%
	ACCATTGCTTCATCTTCGAG+CGG	-	chr1.2:77885941-77885960	None:intergenic	45.0%
	AGTGAGATTTCATGTCCTGG+TGG	-	chr1.2:77885881-77885900	None:intergenic	45.0%
	ATTCAACACCTTCTTGCCAG+AGG	+	chr1.2:77886120-77886139	MS.gene93863:CDS	45.0%
	GGAAGTGAGATTTCATGTCC+TGG	-	chr1.2:77885884-77885903	None:intergenic	45.0%
	TCCCTTGATTGACGATGCAA+GGG	+	chr1.2:77885679-77885698	MS.gene93863:CDS	45.0%
	TTCAACACCTTCTTGCCAGA+GGG	+	chr1.2:77886121-77886140	MS.gene93863:CDS	45.0%
	TTCAACATCTTCTTGCCACC+AGG	+	chr1.2:77885863-77885882	MS.gene93863:CDS	45.0%
	TTCCCTTGATTGACGATGCA+AGG	+	chr1.2:77885678-77885697	MS.gene93863:CDS	45.0%
!	AGTGAGATTTTGTGTCCCTC+TGG	-	chr1.2:77886397-77886416	None:intergenic	45.0%
!	TTTTGGCACGGTAATCAGCT+AGG	-	chr1.2:77886030-77886049	None:intergenic	45.0%
!!	TTTTGGCGCCGAAATCTTGT+AGG	-	chr1.2:77885772-77885791	None:intergenic	45.0%
	ACCGCTCGAAGATGAAGCAA+TGG	+	chr1.2:77885937-77885956	MS.gene93863:CDS	50.0%
	GCCCTTGCATCGTCAATCAA+GGG	-	chr1.2:77885683-77885702	None:intergenic	50.0%
	TTTGTGTCCCTCTGGCAAGA+AGG	-	chr1.2:77886131-77886150	None:intergenic	50.0%
!!	CGATGCAAGGGCGTTTGTAA+AGG	+	chr1.2:77885691-77885710	MS.gene93863:CDS	50.0%
!!	GGCAAGAAGGTGTTGAATCC+CGG	-	chr1.2:77886118-77886137	None:intergenic	50.0%
	CGCCCTTGCATCGTCAATCA+AGG	-	chr1.2:77885684-77885703	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	77885656	77886492	77885656	ID=MS.gene93863
chr1.2	mRNA	77885656	77886492	77885656	ID=MS.gene93863.t1;Parent=MS.gene93863
chr1.2	exon	77885656	77886492	77885656	ID=MS.gene93863.t1.exon1;Parent=MS.gene93863.t1
chr1.2	CDS	77885656	77886492	77885656	ID=cds.MS.gene93863.t1;Parent=MS.gene93863.t1

Gene Sequence

>MS.gene93863

ATGAACAGCTCAAGAAGAACAGTTCCCTTGATTGACGATGCAAGGGCGTTTGTAAAGGATGTAGAAGCTGTGTTTCATGATAAGAGGCAAAAGTATGAAGAATTCGTGAAACTCCTACAAGATTTCGGCGCCAAAAGAATTGATAGAAGAGTCGTCAAAGAAGGAGTTATGGAGTTGTTTAAAGATCATCAAGATTTACTTCCAAGATTCAACATCTTCTTGCCACCAGGACATGAAATCTCACTTCCATTTGATGATGATCTACAACAACATGATCGATCACCGCTCGAAGATGAAGCAATGGTGTTTTTAACAGCAGTTAAGGTTACATTTGAAGATAAGATGGAAAAGTTCAATGAATTCTTGAAACTCCTAGCTGATTACCGTGCCAAAAGAATTGATGTAAGAGTTGTCAAAGAAGGAATGATGGAGTTGTTTAAAGACCATAAAAATTTACTTCCGGGATTCAACACCTTCTTGCCAGAGGGACACAAAATCTCAATTCCATTGGCTGATGATTTACAACAACGTGATCGATTAGCACTCGAAGATGAAGCAACAACGTTTTTAACAGCAGTTAAGGTTACATTTAAAGATAAGATGGAAATGTTCGAGGAATTCTTGAAACTCCTAGCTGATTACCATGCCAAAAGAATTGATGTAAGAGTTATGAAAGAAGGAATGATGGAGTTGTTTAAAGACCATAAAAATTTACTTTTGGGATTCAACACCTTCTTGCCAGAGGGACACAAAATCTCACTTCCATTGGATGGTGATGAACAACAAGATGAAGACGGATCAGAGTTGAAAGATGCACAGAAAGGTGATGAACAATAA

Protein sequence

>MS.gene93863.t1

MNSSRRTVPLIDDARAFVKDVEAVFHDKRQKYEEFVKLLQDFGAKRIDRRVVKEGVMELFKDHQDLLPRFNIFLPPGHEISLPFDDDLQQHDRSPLEDEAMVFLTAVKVTFEDKMEKFNEFLKLLADYRAKRIDVRVVKEGMMELFKDHKNLLPGFNTFLPEGHKISIPLADDLQQRDRLALEDEATTFLTAVKVTFKDKMEMFEEFLKLLADYHAKRIDVRVMKEGMMELFKDHKNLLLGFNTFLPEGHKISLPLDGDEQQDEDGSELKDAQKGDEQ