AlfalfaGEDB | MS.gene91421

M. sativa cultivar XinJiangDaYe / MS.gene91421

KEGG: K11644
GO: GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:1903506 GO:2000112 GO:2001141
PFAM: PF02671.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91421.t1	RHN82063.1	81.1	169	20	1	13	181	2	158	4.90E-69	271.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91421.t1	Q9XIK6	32.7	147	98	1	13	158	84	230	7.8e-15	82.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91421.t1	A0A396K1D1	81.1	169	20	1	13	181	2	158	3.5e-69	271.6

TFs/TRs:

Gene ID	Type	Classification
MS.gene91421.t1	TR	Others

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene91421	MS.gene80089	PPI
MS.gene91421	MS.gene93864	PPI
MS.gene91421	MS.gene99644	PPI
MS.gene91421	MS.gene80087	PPI
MS.gene91330	MS.gene91421	PPI
MS.gene91421	MS.gene71600	PPI
MS.gene91421	MS.gene99643	PPI
MS.gene91421	MS.gene43439	PPI
MS.gene60770	MS.gene91421	PPI
MS.gene91421	MS.gene60770	PPI
MS.gene99644	MS.gene91421	PPI
MS.gene80089	MS.gene91421	PPI
MS.gene91421	MS.gene012752	PPI
MS.gene91421	MS.gene91422	PPI
MS.gene85574	MS.gene91421	PPI
MS.gene80087	MS.gene91421	PPI
MS.gene91421	MS.gene80088	PPI
MS.gene80088	MS.gene91421	PPI
MS.gene91421	MS.gene93863	PPI
MS.gene91421	MS.gene93862	PPI
MS.gene91421	MS.gene95089	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91421.t1	MTR_1g104980	78.495	186	25	2	15	200	1	171	5.99e-94	276
MS.gene91421.t1	MTR_1g104980	52.838	229	52	3	99	325	2	176	7.17e-64	200
MS.gene91421.t1	MTR_1g104960	60.000	185	47	2	1	170	1	173	3.71e-65	203
MS.gene91421.t1	MTR_1g104960	55.682	176	55	1	104	279	21	173	2.52e-57	183
MS.gene91421.t1	MTR_1g104960	51.807	83	40	0	202	284	10	92	1.11e-19	85.1
MS.gene91421.t1	MTR_4g133470	40.143	279	130	8	1	277	1	244	4.54e-43	149
MS.gene91421.t1	MTR_4g133470	41.436	181	74	7	113	292	26	175	9.22e-22	92.8
MS.gene91421.t1	MTR_4g133300	38.489	278	136	6	1	277	1	244	4.67e-42	146
MS.gene91421.t1	MTR_4g133300	38.889	180	80	5	113	292	26	175	8.43e-21	90.1
MS.gene91421.t1	MTR_7g013380	31.271	291	160	7	1	280	1	262	5.44e-30	116
MS.gene91421.t1	MTR_7g013380	29.825	228	119	6	100	323	17	207	1.78e-16	79.0
MS.gene91421.t1	MTR_1g104940	56.436	101	43	1	99	199	17	116	4.52e-29	108
MS.gene91421.t1	MTR_1g104940	50.847	118	46	2	208	325	17	122	6.33e-29	108
MS.gene91421.t1	MTR_1g104940	61.250	80	29	1	5	82	4	83	2.57e-25	98.6
MS.gene91421.t1	MTR_1g105955	39.634	164	93	3	2	164	5	163	2.46e-28	108
MS.gene91421.t1	MTR_1g105955	33.714	175	86	1	99	273	19	163	4.25e-25	100
MS.gene91421.t1	MTR_3g006125	40.828	169	91	3	11	170	87	255	5.39e-27	107
MS.gene91421.t1	MTR_3g006125	36.898	187	89	4	99	279	92	255	1.08e-21	92.8
MS.gene91421.t1	MTR_3g006185	40.476	168	92	3	11	170	6	173	1.41e-26	103
MS.gene91421.t1	MTR_3g006185	36.066	183	95	4	99	279	11	173	1.80e-18	82.0
MS.gene91421.t1	MTR_1g104937	59.740	77	31	0	6	82	5	81	1.66e-25	99.0
MS.gene91421.t1	MTR_1g104937	53.535	99	38	2	99	190	15	112	2.33e-23	93.2
MS.gene91421.t1	MTR_1g104937	55.172	87	38	1	208	294	15	100	8.19e-23	91.7
MS.gene91421.t1	MTR_3g006105	40.588	170	83	5	11	167	6	170	4.55e-24	97.4
MS.gene91421.t1	MTR_3g006105	36.413	184	87	5	99	276	11	170	1.26e-19	85.1
MS.gene91421.t1	MTR_3g006150	38.418	177	81	4	99	274	11	160	1.81e-23	95.1
MS.gene91421.t1	MTR_3g006150	42.208	154	75	4	12	158	7	153	1.57e-22	92.4
MS.gene91421.t1	MTR_3g006150	42.353	85	45	2	208	292	11	91	2.19e-13	67.4
MS.gene91421.t1	MTR_1g104950	60.465	86	25	2	36	117	1	81	5.67e-22	88.6
MS.gene91421.t1	MTR_1g104950	41.667	108	36	2	119	226	1	81	1.94e-16	73.6
MS.gene91421.t1	MTR_1g104950	47.945	73	36	1	228	298	1	73	3.49e-13	64.7
MS.gene91421.t1	MTR_3g006065	39.412	170	87	5	12	172	7	169	1.28e-20	88.2
MS.gene91421.t1	MTR_3g006065	36.994	173	82	4	112	281	21	169	5.35e-20	86.3
MS.gene91421.t1	MTR_5g036670	35.484	155	89	4	11	158	41	191	1.31e-17	84.3
MS.gene91421.t1	MTR_5g036670	29.891	184	103	2	87	267	31	191	6.02e-17	82.4
MS.gene91421.t1	MTR_5g036670	35.780	109	65	1	208	311	46	154	6.01e-12	67.0
MS.gene91421.t1	MTR_1g105960	44.872	78	43	0	208	285	4	81	9.48e-16	72.4
MS.gene91421.t1	MTR_1g105960	44.872	78	43	0	99	176	4	81	5.10e-15	70.5
MS.gene91421.t1	MTR_1g105960	37.288	118	51	2	14	131	2	96	2.72e-13	65.9
MS.gene91421.t1	MTR_8g062700	35.897	156	87	6	11	158	40	190	1.12e-15	78.6
MS.gene91421.t1	MTR_8g062700	33.728	169	89	2	99	267	45	190	1.96e-15	77.8
MS.gene91421.t1	MTR_8g062700	50.000	74	36	1	208	281	45	117	3.92e-13	70.9
MS.gene91421.t1	MTR_8g062700	35.897	156	87	6	11	158	40	190	1.12e-15	78.6
MS.gene91421.t1	MTR_8g062700	33.728	169	89	2	99	267	45	190	1.87e-15	77.8
MS.gene91421.t1	MTR_8g062700	50.000	74	36	1	208	281	45	117	3.85e-13	70.9
MS.gene91421.t1	MTR_1g109550	40.625	128	66	3	4	131	10	127	1.73e-15	72.8
MS.gene91421.t1	MTR_1g109550	34.307	137	57	3	104	240	24	127	1.26e-11	62.0
MS.gene91421.t1	MTR_6g008970	35.065	154	91	3	11	158	61	211	2.58e-15	77.4
MS.gene91421.t1	MTR_6g008970	29.586	169	96	1	99	267	66	211	9.34e-12	66.6
MS.gene91421.t1	MTR_6g008995	34.667	150	91	3	13	158	37	183	2.95e-15	76.6
MS.gene91421.t1	MTR_1g105010	52.381	63	30	0	13	75	16	78	1.67e-14	69.3
MS.gene91421.t1	MTR_8g062350	44.286	70	39	0	13	82	14	83	3.83e-12	65.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91421.t1	AT1G27260	37.572	173	89	2	99	271	6	159	4.24e-25	101
MS.gene91421.t1	AT1G27260	35.519	183	103	3	11	183	1	178	2.30e-23	96.7
MS.gene91421.t1	AT1G27260	45.070	71	39	0	208	278	6	76	9.83e-11	61.2
MS.gene91421.t1	AT1G24230	36.025	161	90	4	11	170	12	160	1.22e-21	92.4
MS.gene91421.t1	AT1G23810	31.507	219	133	4	99	316	17	219	8.03e-21	90.1
MS.gene91421.t1	AT1G23810	28.261	184	110	5	16	183	17	194	2.46e-13	68.9
MS.gene91421.t1	AT1G24250	32.127	221	140	6	99	316	17	230	6.20e-20	87.8
MS.gene91421.t1	AT1G24250	28.718	195	106	6	16	183	17	205	4.30e-13	68.6
MS.gene91421.t1	AT1G10450	34.194	155	93	3	9	158	29	179	1.68e-16	80.9
MS.gene91421.t1	AT1G10450	31.765	170	89	3	99	267	36	179	1.62e-12	68.9
MS.gene91421.t1	AT1G10450	34.194	155	93	3	9	158	29	179	1.68e-16	80.9
MS.gene91421.t1	AT1G10450	31.765	170	89	3	99	267	36	179	1.62e-12	68.9
MS.gene91421.t1	AT1G10450	34.194	155	93	3	9	158	80	230	1.83e-16	80.9
MS.gene91421.t1	AT1G10450	31.765	170	89	3	99	267	87	230	1.74e-12	68.9
MS.gene91421.t1	AT5G15020	35.948	153	85	5	13	158	52	198	1.10e-15	78.6
MS.gene91421.t1	AT5G15020	28.421	190	108	3	99	285	55	219	7.30e-11	63.9
MS.gene91421.t1	AT5G15020	35.948	153	85	5	13	158	52	198	1.16e-15	78.6
MS.gene91421.t1	AT5G15020	28.421	190	108	3	99	285	55	219	7.49e-11	63.9
MS.gene91421.t1	AT1G24190	34.940	166	92	6	11	166	12	171	1.54e-15	78.2
MS.gene91421.t1	AT1G24190	30.556	180	97	6	99	275	17	171	1.02e-11	66.6
MS.gene91421.t1	AT1G24190	34.940	166	92	6	11	166	12	171	1.56e-15	78.2
MS.gene91421.t1	AT1G24190	30.556	180	97	6	99	275	17	171	1.16e-11	66.2
MS.gene91421.t1	AT1G24190	34.940	166	92	6	11	166	12	171	1.57e-15	78.2
MS.gene91421.t1	AT1G24190	30.556	180	97	6	99	275	17	171	1.08e-11	66.2
MS.gene91421.t1	AT3G01320	33.918	171	97	6	11	174	55	216	2.22e-15	77.8
MS.gene91421.t1	AT3G01320	28.108	185	105	3	99	283	60	216	5.67e-11	64.3
MS.gene91421.t1	AT3G01320	33.918	171	97	6	11	174	55	216	2.82e-15	77.4
MS.gene91421.t1	AT3G01320	28.108	185	105	3	99	283	60	216	5.56e-11	64.3
MS.gene91421.t1	AT1G70060	35.484	155	90	4	11	158	12	163	1.34e-14	75.1
MS.gene91421.t1	AT1G70060	30.178	169	96	2	99	267	17	163	9.70e-12	66.6
MS.gene91421.t1	AT1G70060	35.484	155	90	4	11	158	12	163	1.34e-14	75.1
MS.gene91421.t1	AT1G70060	30.178	169	96	2	99	267	17	163	9.70e-12	66.6
MS.gene91421.t1	AT1G24200	32.515	163	86	6	9	159	10	160	7.45e-13	67.0
MS.gene91421.t1	AT1G24200	44.578	83	43	2	191	273	3	82	4.93e-12	64.3
MS.gene91421.t1	AT1G59890	34.416	154	86	4	13	158	45	191	7.52e-13	70.1
MS.gene91421.t1	AT1G59890	34.416	154	86	4	13	158	45	191	7.68e-13	69.7
MS.gene91421.t1	AT1G59890	34.416	154	86	4	13	158	45	191	8.48e-13	69.7
MS.gene91421.t1	AT1G59890	34.416	154	86	4	13	158	45	191	8.48e-13	69.7
MS.gene91421.t1	AT1G27280	31.646	158	103	2	24	176	4	161	1.48e-12	66.6
MS.gene91421.t1	AT1G27280	30.168	179	104	4	107	285	4	161	1.36e-11	63.9
MS.gene91421.t1	AT5G15025	45.714	70	38	0	13	82	47	116	2.39e-12	63.5
MS.gene91421.t1	AT1G27220	40.260	77	46	0	5	81	6	82	3.40e-12	64.7
MS.gene91421.t1	AT5G15040	41.791	67	39	0	99	165	6	72	1.19e-11	60.5
MS.gene91421.t1	AT5G15040	37.681	69	43	0	206	274	4	72	4.99e-11	58.9
MS.gene91421.t1	AT5G15040	41.791	67	39	0	99	165	6	72	1.19e-11	60.5
MS.gene91421.t1	AT5G15040	37.681	69	43	0	206	274	4	72	4.99e-11	58.9
MS.gene91421.t1	AT5G15040	41.791	67	39	0	99	165	6	72	1.19e-11	60.5
MS.gene91421.t1	AT5G15040	37.681	69	43	0	206	274	4	72	4.99e-11	58.9

Find 48 sgRNAs with CRISPR-Local

Find 58 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACTGCTGTTGCAAACGAATT+TGG	0.114157	1.3:-71696838	None:intergenic
TGAAACTCCTACATGATTTC+AGG	0.203193	1.3:+71696656	MS.gene91421:CDS
GTCCCAAAAGTAGATCTTTA+TGG	0.235078	1.3:-71696984	None:intergenic
AACTCTAAAATCAATTCTTT+TGG	0.284021	1.3:-71697256	None:intergenic
AACTCTCATATCAATTCTTT+TGG	0.286653	1.3:-71696929	None:intergenic
CTGCTGTTGCAAACGAATTT+GGG	0.300087	1.3:-71696837	None:intergenic
AACTCTTCTATCAATTCTTT+TGG	0.305538	1.3:-71696680	None:intergenic
AGACCATAAAGATCTACTTT+TGG	0.325498	1.3:+71696981	MS.gene91421:CDS
TGAAGCAATGACGTTTATAA+AGG	0.363280	1.3:+71696585	MS.gene91421:CDS
AGTAGAATTAATCCCTTGAT+TGG	0.383598	1.3:+71696562	MS.gene91421:CDS
CGTCATTGCTTCACCAATCA+AGG	0.390356	1.3:-71696575	None:intergenic
AGTTGCATTTCCAGATAAGA+TGG	0.401348	1.3:+71696864	MS.gene91421:CDS
AGTTGCATTTCAAGATAAGA+TGG	0.422713	1.3:+71697191	MS.gene91421:CDS
ACTTGTGTTTCAAGATAAGA+AGG	0.472355	1.3:+71696615	MS.gene91421:CDS
AGTTGTCAAAGATGGAGTTA+TGG	0.472541	1.3:+71696699	MS.gene91421:CDS
TTCAACATCTTCTTGCCAGC+AGG	0.472583	1.3:+71696757	MS.gene91421:CDS
CTTCTATTCTTCTTGCCACC+AGG	0.488485	1.3:+71696793	MS.gene91421:CDS
GATAGAAGAGTTGTCAAAGA+TGG	0.492886	1.3:+71696691	MS.gene91421:CDS
AATCAAGGGATTAATTCTAC+TGG	0.502349	1.3:-71696560	None:intergenic
GAAACTCCTACATGATTTCA+GGG	0.508203	1.3:+71696657	MS.gene91421:CDS
ACACAAAATCTCACTTCCAT+TGG	0.512949	1.3:+71697356	MS.gene91421:CDS
ACACAAAATCTCACTTCCAT+TGG	0.514630	1.3:+71697029	MS.gene91421:CDS
GATGAACAACAAGGTGATGA+TGG	0.529706	1.3:+71697384	MS.gene91421:CDS
GATGATGAACAACAAGGTGA+TGG	0.541884	1.3:+71697105	MS.gene91421:CDS
AACGAATTTGGGAATAGAAG+TGG	0.545086	1.3:-71696826	None:intergenic
GATGAACAACAAGGTGGAGA+TGG	0.545992	1.3:+71697057	MS.gene91421:CDS
TGAACTTCAAGTTGATGAAG+TGG	0.554268	1.3:+71697470	MS.gene91421:CDS
CTCAACACTTGGTTGCCAGC+AGG	0.555626	1.3:+71697333	MS.gene91421:CDS
GATGCTGAACAACAAGGTGA+TGG	0.558029	1.3:+71697432	MS.gene91421:CDS
ACGAATTTGGGAATAGAAGT+GGG	0.571692	1.3:-71696825	None:intergenic
AGTGGGATTTCATCTCCTGC+TGG	0.573929	1.3:-71696772	None:intergenic
TGTTGTTCATCACCATCCAA+TGG	0.575143	1.3:-71697045	None:intergenic
TGTTGTTCATCACCATCCAA+TGG	0.575143	1.3:-71697372	None:intergenic
AGAAGTGGGAATTCATGTCC+TGG	0.583648	1.3:-71696811	None:intergenic
ACTCAACACTTGGTTGCCAG+TGG	0.586298	1.3:+71697005	MS.gene91421:CDS
GTCATTGCTTCACCAATCAA+GGG	0.590508	1.3:-71696574	None:intergenic
AAAATCTCACTTCCATTGGA+TGG	0.592611	1.3:+71697033	MS.gene91421:CDS
AAAATCTCACTTCCATTGGA+TGG	0.592611	1.3:+71697360	MS.gene91421:CDS
GGTGGCAAGAAGAATAGAAG+TGG	0.618772	1.3:-71696790	None:intergenic
TGAACAACAAGGTGATGGAT+CGG	0.624867	1.3:+71697110	MS.gene91421:CDS
CAGAAAGATGCTGAACAACA+AGG	0.627330	1.3:+71697426	MS.gene91421:CDS
CTCAACACTTGGTTGCCAGT+GGG	0.645795	1.3:+71697006	MS.gene91421:CDS
GTGGCAAGAAGAATAGAAGT+GGG	0.680483	1.3:-71696789	None:intergenic
CAGAAAGATGATGAACAACA+AGG	0.695192	1.3:+71697099	MS.gene91421:CDS
AGTGGGAATTCATGTCCTGG+TGG	0.708807	1.3:-71696808	None:intergenic
GATGGTGATGAACAACAAGG+TGG	0.767576	1.3:+71697051	MS.gene91421:CDS
TTGGATGGTGATGAACAACA+AGG	0.791947	1.3:+71697048	MS.gene91421:CDS
TTGGATGGTGATGAACAACA+AGG	0.791947	1.3:+71697375	MS.gene91421:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AACTCTAAAATCAATTCTTT+TGG	-	chr1.3:71697259-71697278	None:intergenic	20.0%
!!!	AGACCATAAAAATTTACTTT+TGG	+	chr1.3:71697308-71697327	MS.gene91421:CDS	20.0%
!!!	GACCATAAAAATTTACTTTT+GGG	+	chr1.3:71697309-71697328	MS.gene91421:CDS	20.0%
!!	AACTCTCATATCAATTCTTT+TGG	-	chr1.3:71696932-71696951	None:intergenic	25.0%
!!	AACTCTTCTATCAATTCTTT+TGG	-	chr1.3:71696683-71696702	None:intergenic	25.0%
!!	GTCCCAAAAGTAAATTTTTA+TGG	-	chr1.3:71697314-71697333	None:intergenic	25.0%
!!!	GATTTTAGAGTTTTCAAAGA+AGG	+	chr1.3:71697267-71697286	MS.gene91421:CDS	25.0%
	AATCAAGGGATTAATTCTAC+TGG	-	chr1.3:71696563-71696582	None:intergenic	30.0%
	ACTTGTGTTTCAAGATAAGA+AGG	+	chr1.3:71696615-71696634	MS.gene91421:CDS	30.0%
	AGTAGAATTAATCCCTTGAT+TGG	+	chr1.3:71696562-71696581	MS.gene91421:CDS	30.0%
	AGTTGCATTTCAAGATAAGA+TGG	+	chr1.3:71697191-71697210	MS.gene91421:CDS	30.0%
	TGAAGCAATGACGTTTATAA+AGG	+	chr1.3:71696585-71696604	MS.gene91421:CDS	30.0%
!	AGACCATAAAGATCTACTTT+TGG	+	chr1.3:71696981-71697000	MS.gene91421:CDS	30.0%
!	GATATGAGAGTTTTCAAAGA+AGG	+	chr1.3:71696940-71696959	MS.gene91421:CDS	30.0%
!	TAGAGTTTTCAAAGAAGGAA+TGG	+	chr1.3:71697272-71697291	MS.gene91421:CDS	30.0%
!	TCATACTTTTCCATCTTATC+TGG	-	chr1.3:71696877-71696896	None:intergenic	30.0%
!!	GACCATAAAGATCTACTTTT+GGG	+	chr1.3:71696982-71697001	MS.gene91421:CDS	30.0%
	AAAATCTCACTTCCATTGGA+TGG	+	chr1.3:71697033-71697052	MS.gene91421:CDS	35.0%
	AACGAATTTGGGAATAGAAG+TGG	-	chr1.3:71696829-71696848	None:intergenic	35.0%
	ACACAAAATCTCACTTCCAT+TGG	+	chr1.3:71697029-71697048	MS.gene91421:CDS	35.0%
	ACGAATTTGGGAATAGAAGT+GGG	-	chr1.3:71696828-71696847	None:intergenic	35.0%
	AGTTGCATTTCCAGATAAGA+TGG	+	chr1.3:71696864-71696883	MS.gene91421:CDS	35.0%
	AGTTGTCAAAGATGGAGTTA+TGG	+	chr1.3:71696699-71696718	MS.gene91421:CDS	35.0%
	CAGAAAGATGATGAACAACA+AGG	+	chr1.3:71697099-71697118	MS.gene91421:CDS	35.0%
	GAAACTCCTACATGATTTCA+GGG	+	chr1.3:71696657-71696676	MS.gene91421:CDS	35.0%
	GATAGAAGAGTTGTCAAAGA+TGG	+	chr1.3:71696691-71696710	MS.gene91421:CDS	35.0%
	GTCCCAAAAGTAGATCTTTA+TGG	-	chr1.3:71696987-71697006	None:intergenic	35.0%
	TGAAACTCCTACATGATTTC+AGG	+	chr1.3:71696656-71696675	MS.gene91421:CDS	35.0%
!	AGTTTTCAAAGAAGGAATGG+TGG	+	chr1.3:71696948-71696967	MS.gene91421:CDS	35.0%
!	GAGAGTTTTCAAAGAAGGAA+TGG	+	chr1.3:71696945-71696964	MS.gene91421:CDS	35.0%
!!	TGAACTTCAAGTTGATGAAG+TGG	+	chr1.3:71697470-71697489	MS.gene91421:CDS	35.0%
	ACTGCTGTTGCAAACGAATT+TGG	-	chr1.3:71696841-71696860	None:intergenic	40.0%
	CAGAAAGATGCTGAACAACA+AGG	+	chr1.3:71697426-71697445	MS.gene91421:CDS	40.0%
	CTGCTGTTGCAAACGAATTT+GGG	-	chr1.3:71696840-71696859	None:intergenic	40.0%
	GATGAACAACAAGGTGATGA+TGG	+	chr1.3:71697384-71697403	MS.gene91421:CDS	40.0%
	GATGATGAACAACAAGGTGA+TGG	+	chr1.3:71697105-71697124	MS.gene91421:CDS	40.0%
	GTCATTGCTTCACCAATCAA+GGG	-	chr1.3:71696577-71696596	None:intergenic	40.0%
	GTGGCAAGAAGAATAGAAGT+GGG	-	chr1.3:71696792-71696811	None:intergenic	40.0%
	TGTTGTTCATCACCATCCAA+TGG	-	chr1.3:71697048-71697067	None:intergenic	40.0%
!	TTGGATGGTGATGAACAACA+AGG	+	chr1.3:71697048-71697067	MS.gene91421:CDS	40.0%
!	TTTTGGCCCTGAAATCATGT+AGG	-	chr1.3:71696666-71696685	None:intergenic	40.0%
!!	TGAACAACAAGGTGATGGAT+CGG	+	chr1.3:71697110-71697129	MS.gene91421:CDS	40.0%
!!!	TACTTTTGGGACTCAACACT+TGG	+	chr1.3:71696995-71697014	MS.gene91421:CDS	40.0%
	AGAAGTGGGAATTCATGTCC+TGG	-	chr1.3:71696814-71696833	None:intergenic	45.0%
	CGTCATTGCTTCACCAATCA+AGG	-	chr1.3:71696578-71696597	None:intergenic	45.0%
	CTTCTATTCTTCTTGCCACC+AGG	+	chr1.3:71696793-71696812	MS.gene91421:CDS	45.0%
	GATGAACAACAAGGTGGAGA+TGG	+	chr1.3:71697057-71697076	MS.gene91421:CDS	45.0%
	GATGCTGAACAACAAGGTGA+TGG	+	chr1.3:71697432-71697451	MS.gene91421:CDS	45.0%
	GGTGGCAAGAAGAATAGAAG+TGG	-	chr1.3:71696793-71696812	None:intergenic	45.0%
	TTCAACATCTTCTTGCCAGC+AGG	+	chr1.3:71696757-71696776	MS.gene91421:CDS	45.0%
!	AGTGAGATTTTGTGTCCCAC+TGG	-	chr1.3:71697024-71697043	None:intergenic	45.0%
!	AGTGAGATTTTGTGTCCTGC+TGG	-	chr1.3:71697351-71697370	None:intergenic	45.0%
!	GATGGTGATGAACAACAAGG+TGG	+	chr1.3:71697051-71697070	MS.gene91421:CDS	45.0%
	ACTCAACACTTGGTTGCCAG+TGG	+	chr1.3:71697005-71697024	MS.gene91421:CDS	50.0%
	AGTGGGAATTCATGTCCTGG+TGG	-	chr1.3:71696811-71696830	None:intergenic	50.0%
	AGTGGGATTTCATCTCCTGC+TGG	-	chr1.3:71696775-71696794	None:intergenic	50.0%
	CTCAACACTTGGTTGCCAGT+GGG	+	chr1.3:71697006-71697025	MS.gene91421:CDS	50.0%
	CTCAACACTTGGTTGCCAGC+AGG	+	chr1.3:71697333-71697352	MS.gene91421:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	71696550	71697527	71696550	ID=MS.gene91421
chr1.3	mRNA	71696550	71697527	71696550	ID=MS.gene91421.t1;Parent=MS.gene91421
chr1.3	exon	71696550	71697527	71696550	ID=MS.gene91421.t1.exon1;Parent=MS.gene91421.t1
chr1.3	CDS	71696550	71697527	71696550	ID=cds.MS.gene91421.t1;Parent=MS.gene91421.t1

Gene Sequence

>MS.gene91421

ATGAACAGCTCCAGTAGAATTAATCCCTTGATTGGTGAAGCAATGACGTTTATAAAGGATGTAAAACTTGTGTTTCAAGATAAGAAGGAAAAGTTTAATGAATTCATGAAACTCCTACATGATTTCAGGGCCAAAAGAATTGATAGAAGAGTTGTCAAAGATGGAGTTATGGAGTTGTTGAAAGAACATCAAGATTTAATTTCAAGATTCAACATCTTCTTGCCAGCAGGAGATGAAATCCCACTTCTATTCTTCTTGCCACCAGGACATGAATTCCCACTTCTATTCCCAAATTCGTTTGCAACAGCAGTTAAAGTTGCATTTCCAGATAAGATGGAAAAGTATGATGAATTCTTGAAACTCGTAGTTGATTGCAATGCCAAAAGAATTGATATGAGAGTTTTCAAAGAAGGAATGGTGGAGTTGTTTAAAGACCATAAAGATCTACTTTTGGGACTCAACACTTGGTTGCCAGTGGGACACAAAATCTCACTTCCATTGGATGGTGATGAACAACAAGGTGGAGATGGATTAGAGTTGAAAGATGCACAGAAAGATGATGAACAACAAGGTGATGGATCGGCGCTCAAAGATGAATCAGCACTCGCAGATGCAACAAAGTCGTTTGCAACAGCAGTTAAAGTTGCATTTCAAGATAAGATGGATAAGTATGATGAATTCTTAAAACTCATAATTGATTGTCGTACCAAAAGAATTGATTTTAGAGTTTTCAAAGAAGGAATGGTGGAGTTGTTTAAAGACCATAAAAATTTACTTTTGGGACTCAACACTTGGTTGCCAGCAGGACACAAAATCTCACTTCCATTGGATGGTGATGAACAACAAGGTGATGATGGATTAGAGTTGAAAGATGCACAGAAAGATGCTGAACAACAAGGTGATGGATTAGAGTACAAAGATGAACTTCAAGTTGATGAAGTGGCACTCAAAGATGAGCAGAAAGATGACGAACAATAA

Protein sequence

>MS.gene91421.t1

MNSSSRINPLIGEAMTFIKDVKLVFQDKKEKFNEFMKLLHDFRAKRIDRRVVKDGVMELLKEHQDLISRFNIFLPAGDEIPLLFFLPPGHEFPLLFPNSFATAVKVAFPDKMEKYDEFLKLVVDCNAKRIDMRVFKEGMVELFKDHKDLLLGLNTWLPVGHKISLPLDGDEQQGGDGLELKDAQKDDEQQGDGSALKDESALADATKSFATAVKVAFQDKMDKYDEFLKLIIDCRTKRIDFRVFKEGMVELFKDHKNLLLGLNTWLPAGHKISLPLDGDEQQGDDGLELKDAQKDAEQQGDGLEYKDELQVDEVALKDEQKDDEQ