Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014973.t1 | XP_024633438.1 | 98.5 | 733 | 10 | 1 | 37 | 768 | 39 | 771 | 0.00E+00 | 1384 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014973.t1 | Q9LYG9 | 56.2 | 712 | 293 | 9 | 50 | 757 | 34 | 730 | 2.7e-207 | 723.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014973.t1 | G7J8E6 | 98.5 | 733 | 10 | 1 | 37 | 768 | 39 | 771 | 0.0e+00 | 1384.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene014973 | MS.gene42628 | PPI |
| MS.gene014973 | MS.gene014978 | PPI |
| MS.gene014973 | MS.gene74110 | PPI |
| MS.gene42686 | MS.gene014973 | PPI |
| MS.gene32764 | MS.gene014973 | PPI |
| MS.gene014973 | MS.gene42688 | PPI |
| MS.gene062410 | MS.gene014973 | PPI |
| MS.gene42622 | MS.gene014973 | PPI |
| MS.gene32770 | MS.gene014973 | PPI |
| MS.gene42620 | MS.gene014973 | PPI |
| MS.gene014973 | MS.gene97525 | PPI |
| MS.gene32773 | MS.gene014973 | PPI |
| MS.gene97525 | MS.gene014973 | PPI |
| MS.gene014973 | MS.gene014981 | PPI |
| MS.gene42681 | MS.gene014973 | PPI |
| MS.gene014978 | MS.gene014973 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014973.t1 | MTR_3g104990 | 98.184 | 771 | 11 | 2 | 1 | 768 | 1 | 771 | 0.0 | 1552 |
| MS.gene014973.t1 | MTR_3g104940 | 86.305 | 774 | 98 | 4 | 1 | 768 | 1 | 772 | 0.0 | 1301 |
| MS.gene014973.t1 | MTR_3g104920 | 80.415 | 771 | 126 | 6 | 1 | 768 | 1 | 749 | 0.0 | 1224 |
| MS.gene014973.t1 | MTR_3g104920 | 80.449 | 757 | 125 | 5 | 15 | 768 | 1 | 737 | 0.0 | 1203 |
| MS.gene014973.t1 | MTR_2g041220 | 51.053 | 760 | 322 | 15 | 19 | 757 | 15 | 745 | 0.0 | 702 |
| MS.gene014973.t1 | MTR_8g071250 | 46.528 | 576 | 285 | 10 | 195 | 760 | 129 | 691 | 1.37e-164 | 492 |
| MS.gene014973.t1 | MTR_1g113850 | 40.117 | 683 | 341 | 11 | 137 | 767 | 251 | 917 | 4.07e-158 | 483 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014973.t1 | AT5G12080 | 58.345 | 713 | 278 | 9 | 49 | 757 | 33 | 730 | 0.0 | 827 |
| MS.gene014973.t1 | AT5G12080 | 58.345 | 713 | 278 | 9 | 49 | 757 | 33 | 730 | 0.0 | 827 |
| MS.gene014973.t1 | AT5G12080 | 58.345 | 713 | 278 | 9 | 49 | 757 | 33 | 730 | 0.0 | 827 |
| MS.gene014973.t1 | AT5G19520 | 52.983 | 704 | 312 | 6 | 58 | 757 | 50 | 738 | 0.0 | 744 |
| MS.gene014973.t1 | AT5G19520 | 52.983 | 704 | 312 | 6 | 58 | 757 | 50 | 738 | 0.0 | 744 |
| MS.gene014973.t1 | AT2G17010 | 41.556 | 604 | 317 | 5 | 188 | 760 | 292 | 890 | 4.49e-158 | 482 |
| MS.gene014973.t1 | AT1G53470 | 39.625 | 694 | 357 | 12 | 115 | 760 | 181 | 860 | 1.31e-155 | 475 |
| MS.gene014973.t1 | AT3G14810 | 42.197 | 692 | 344 | 15 | 115 | 765 | 188 | 864 | 5.73e-155 | 473 |
| MS.gene014973.t1 | AT1G78610 | 42.296 | 636 | 325 | 8 | 166 | 767 | 211 | 838 | 9.04e-154 | 469 |
| MS.gene014973.t1 | AT2G17000 | 41.408 | 611 | 317 | 9 | 182 | 760 | 222 | 823 | 3.53e-144 | 444 |
| MS.gene014973.t1 | AT2G17000 | 41.408 | 611 | 317 | 9 | 182 | 760 | 222 | 823 | 5.73e-144 | 444 |
| MS.gene014973.t1 | AT3G14810 | 39.623 | 689 | 325 | 16 | 115 | 762 | 188 | 826 | 1.02e-134 | 420 |
| MS.gene014973.t1 | AT2G17010 | 35.833 | 360 | 195 | 5 | 188 | 516 | 292 | 646 | 2.37e-64 | 227 |
Find 152 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAATGAACTTTCAAGAATT+TGG | 0.059991 | 3.2:-86719051 | MS.gene014973:CDS |
| GACATTGTTGCTAAAGATTT+TGG | 0.123829 | 3.2:-86720852 | MS.gene014973:CDS |
| TTTCTTTGTGCTACCTTTAC+TGG | 0.130051 | 3.2:+86720673 | None:intergenic |
| TAAATTGGCCACGAAGATTT+TGG | 0.178672 | 3.2:-86720933 | MS.gene014973:CDS |
| TCTACACTGTCACCCATATT+AGG | 0.187404 | 3.2:+86719380 | None:intergenic |
| TCATTTGTAGCAGGAGCTTT+TGG | 0.190150 | 3.2:+86721610 | None:intergenic |
| TTGTACTCCTGAAACTAAAA+TGG | 0.194746 | 3.2:+86720696 | None:intergenic |
| CAATGAACTTTCAAGAATTT+GGG | 0.230393 | 3.2:-86719050 | MS.gene014973:CDS |
| AGATTTGGAGTTTGGGGCTT+TGG | 0.250678 | 3.2:-86721171 | MS.gene014973:CDS |
| AAGTAACATTCTCTTCTAAA+AGG | 0.256225 | 3.2:+86721497 | None:intergenic |
| TTCATGGACTATGAAGATTT+TGG | 0.258155 | 3.2:-86720600 | MS.gene014973:CDS |
| ACTCCGTAGGTTCTTGATTA+AGG | 0.262247 | 3.2:-86720064 | MS.gene014973:CDS |
| CTAGGGATGAACCTTATTTC+AGG | 0.265146 | 3.2:+86721646 | None:intergenic |
| TCAGGGGAAGCACAGTTTAA+AGG | 0.276027 | 3.2:+86721664 | None:intergenic |
| AAGGACGGAGATTTGGAGTT+TGG | 0.278610 | 3.2:-86721179 | MS.gene014973:CDS |
| GTACTTGCTGCTTTCATGTT+TGG | 0.284157 | 3.2:-86719687 | MS.gene014973:CDS |
| TTATTACAGAAGCCCTAATA+TGG | 0.287671 | 3.2:-86719393 | MS.gene014973:CDS |
| TTGTTCACCAAATCTTGATT+TGG | 0.289978 | 3.2:+86721540 | None:intergenic |
| ACTGTTCCGGGTTTATTATT+CGG | 0.295778 | 3.2:+86721421 | None:intergenic |
| TATGTTCTGCAGACTCTCTC+TGG | 0.301029 | 3.2:-86720770 | MS.gene014973:CDS |
| AACAGTTCTATAAACTGTTC+CGG | 0.312967 | 3.2:+86721408 | None:intergenic |
| TTCTCAGCCTCTTCCATTAG+TGG | 0.319988 | 3.2:+86720743 | None:intergenic |
| TGGAGTCGAACGATCTAAAT+TGG | 0.321444 | 3.2:-86720948 | MS.gene014973:CDS |
| TAACAGTTGAGGAACTAAAA+AGG | 0.321821 | 3.2:-86721198 | MS.gene014973:CDS |
| GATGAACACCTTGCGGAATA+AGG | 0.326639 | 3.2:+86718953 | None:intergenic |
| TCTAAAAGGATTCCATCAAT+AGG | 0.336245 | 3.2:+86721511 | None:intergenic |
| GGTGAACGTGGTGCTTTATA+TGG | 0.336535 | 3.2:+86721442 | None:intergenic |
| ACTGTGCTTCCCCTGAAATA+AGG | 0.336839 | 3.2:-86721657 | MS.gene014973:CDS |
| CTACTGGCACAGGCAGAAAC+AGG | 0.337087 | 3.2:-86720018 | MS.gene014973:CDS |
| TCTCTCTGGGCCTCCACTAA+TGG | 0.337430 | 3.2:-86720756 | MS.gene014973:CDS |
| CACTCCTAGAACACCTTTGA+TGG | 0.340051 | 3.2:-86721368 | MS.gene014973:CDS |
| TTTATGGCTAGGACAGAGTT+TGG | 0.349369 | 3.2:+86719428 | None:intergenic |
| CAGAAAATCTTTAGCAGCTT+GGG | 0.350080 | 3.2:-86719986 | MS.gene014973:CDS |
| AGGACGGAGATTTGGAGTTT+GGG | 0.350085 | 3.2:-86721178 | MS.gene014973:CDS |
| TGTTCACCAAATCTTGATTT+GGG | 0.359204 | 3.2:+86721541 | None:intergenic |
| TTTGGAGTTTGGGGCTTTGG+AGG | 0.367529 | 3.2:-86721168 | MS.gene014973:CDS |
| TCTAAGCCCAAATCAAGATT+TGG | 0.368072 | 3.2:-86721547 | MS.gene014973:CDS |
| AGCAAGAGAAAGTTTCTTCA+TGG | 0.373517 | 3.2:-86720616 | MS.gene014973:CDS |
| TCCTTTGGTATTTCCCCTAC+TGG | 0.375771 | 3.2:-86720034 | MS.gene014973:CDS |
| AAAGAAAGAGGTTATTGATA+TGG | 0.383412 | 3.2:-86720657 | MS.gene014973:CDS |
| AACATTCCTGAAAACGTAAT+AGG | 0.384096 | 3.2:+86720454 | None:intergenic |
| AGTAGTGTGGCTTCTTCTAA+TGG | 0.385108 | 3.2:-86719754 | MS.gene014973:CDS |
| GATGCCATCAAAGGTGTTCT+AGG | 0.387245 | 3.2:+86721364 | None:intergenic |
| TCAACTCATGATCATGATCT+TGG | 0.387525 | 3.2:+86721728 | None:intergenic |
| GGAGTTTGGGGCTTTGGAGG+TGG | 0.388035 | 3.2:-86721165 | MS.gene014973:CDS |
| CTACACTGTCACCCATATTA+GGG | 0.388576 | 3.2:+86719381 | None:intergenic |
| ACAGTTCTATAAACTGTTCC+GGG | 0.389897 | 3.2:+86721409 | None:intergenic |
| CACTTAAGATAACTTGAATC+AGG | 0.390741 | 3.2:+86718916 | None:intergenic |
| TTCTTGTATATGATTTCATC+AGG | 0.393170 | 3.2:+86721319 | None:intergenic |
| ACTCTTGTTTCCCTTCTCAT+TGG | 0.393699 | 3.2:-86720896 | MS.gene014973:CDS |
| CAATTAAACAAGCTAGTTAC+AGG | 0.398707 | 3.2:-86719798 | MS.gene014973:CDS |
| CCAGAAAATCTTTAGCAGCT+TGG | 0.399961 | 3.2:-86719987 | MS.gene014973:CDS |
| CACTAATTCACTTCTCCGCT+TGG | 0.404975 | 3.2:+86719020 | None:intergenic |
| CTGGCATCCTAGTTTCAGTT+TGG | 0.410393 | 3.2:-86719130 | MS.gene014973:CDS |
| GATTAAGGAAGAAGTTCCTT+TGG | 0.415393 | 3.2:-86720049 | MS.gene014973:CDS |
| CTACTATGGTCACCACTACT+AGG | 0.415578 | 3.2:+86719772 | None:intergenic |
| CTGTTTCTGCCTGTGCCAGT+AGG | 0.426864 | 3.2:+86720019 | None:intergenic |
| CATCGATCGCCAACATCAAA+TGG | 0.429406 | 3.2:+86719612 | None:intergenic |
| GACAATGTGCGTGAACCATT+TGG | 0.437003 | 3.2:+86721102 | None:intergenic |
| TGGAGAGGAATCCACAATAC+TGG | 0.438670 | 3.2:-86719149 | MS.gene014973:CDS |
| AGCAGTTGCTTCCATCTCAT+TGG | 0.438791 | 3.2:+86720481 | None:intergenic |
| GAGTCTGCAGAACATATTGA+TGG | 0.441671 | 3.2:+86720777 | None:intergenic |
| TGTTTCTGCCTGTGCCAGTA+GGG | 0.443402 | 3.2:+86720020 | None:intergenic |
| GAACAACCTTACCCTATTGA+TGG | 0.443872 | 3.2:-86721523 | MS.gene014973:CDS |
| TATATTCTTACTTGCAGCTA+GGG | 0.445433 | 3.2:+86720423 | None:intergenic |
| CTTGAAACTTAATAATGAAA+AGG | 0.452787 | 3.2:-86719459 | MS.gene014973:CDS |
| CTAAAAGGATTCCATCAATA+GGG | 0.453814 | 3.2:+86721512 | None:intergenic |
| ACGACGTCAGCAGAGAAAAT+CGG | 0.461578 | 3.2:-86719341 | MS.gene014973:CDS |
| TAGAAGAAGCCACACTACTA+TGG | 0.462238 | 3.2:+86719758 | None:intergenic |
| GTGCATCACGGGTAGCTTGT+TGG | 0.471724 | 3.2:-86721227 | MS.gene014973:CDS |
| ATCTAGAGAATTAGAGATTG+TGG | 0.475217 | 3.2:+86720550 | None:intergenic |
| TCGCTTTGGTTCTACTCACA+TGG | 0.480459 | 3.2:-86720988 | MS.gene014973:CDS |
| GGTATTTCCCCTACTGGCAC+AGG | 0.484922 | 3.2:-86720028 | MS.gene014973:CDS |
| TGTACTCCTGAAACTAAAAT+GGG | 0.489996 | 3.2:+86720697 | None:intergenic |
| GGATCCTCACCAGCTGGACC+TGG | 0.490344 | 3.2:+86721340 | None:intergenic |
| GTGGCATGTTAGTTACCAAA+TGG | 0.493145 | 3.2:-86721117 | MS.gene014973:CDS |
| AAGAAAGTTGAATTTAGTAA+AGG | 0.494912 | 3.2:-86721301 | MS.gene014973:CDS |
| AAATGTAAATAAGATTAAGA+TGG | 0.497083 | 3.2:-86719091 | MS.gene014973:CDS |
| ATCTCCAGGTCCAGCTGGTG+AGG | 0.497675 | 3.2:-86721344 | MS.gene014973:CDS |
| AATGTAAATAAGATTAAGAT+GGG | 0.505449 | 3.2:-86719090 | MS.gene014973:CDS |
| TAGTTTCAGTTTGGCAGTGA+AGG | 0.512844 | 3.2:-86719121 | MS.gene014973:CDS |
| TTTGTGTTTGTGTGCATCAC+GGG | 0.513377 | 3.2:-86721238 | MS.gene014973:CDS |
| CGCTTTGGTTCTACTCACAT+GGG | 0.514104 | 3.2:-86720987 | MS.gene014973:CDS |
| TGGACTGAAGAAATGTATCC+AGG | 0.514151 | 3.2:-86721023 | MS.gene014973:CDS |
| ATGGCATCTCCAGGTCCAGC+TGG | 0.514371 | 3.2:-86721349 | MS.gene014973:CDS |
| TTCAGGAGTACAACCAGTAA+AGG | 0.520751 | 3.2:-86720686 | MS.gene014973:CDS |
| ATATATTCTTACTTGCAGCT+AGG | 0.525421 | 3.2:+86720422 | None:intergenic |
| ATGTTCTGCAGACTCTCTCT+GGG | 0.525655 | 3.2:-86720769 | MS.gene014973:CDS |
| TAGGGATGAACCTTATTTCA+GGG | 0.528282 | 3.2:+86721647 | None:intergenic |
| TCATCAGGATCCTCACCAGC+TGG | 0.532211 | 3.2:+86721334 | None:intergenic |
| GTTGGCTAGTTTAACAGTTG+AGG | 0.533975 | 3.2:-86721209 | MS.gene014973:CDS |
| CATTACAAACACGAAGATGA+TGG | 0.535612 | 3.2:+86719638 | None:intergenic |
| ACACCTTTGATGGCATCTCC+AGG | 0.537728 | 3.2:-86721358 | MS.gene014973:CDS |
| GGATACATTTCTTCAGTCCA+TGG | 0.539549 | 3.2:+86721026 | None:intergenic |
| GGACGGAGATTTGGAGTTTG+GGG | 0.539859 | 3.2:-86721177 | MS.gene014973:CDS |
| TACACCATCCAAAATCTTCG+TGG | 0.540293 | 3.2:+86720925 | None:intergenic |
| TATTACAGAAGCCCTAATAT+GGG | 0.542039 | 3.2:-86719392 | MS.gene014973:CDS |
| AGGATTCCATCAATAGGGTA+AGG | 0.542280 | 3.2:+86721517 | None:intergenic |
| TAAAGGTAGCACAAAGAAAG+AGG | 0.543539 | 3.2:-86720669 | MS.gene014973:CDS |
| GAGGTGGTGTATGCTTGTGA+TGG | 0.544535 | 3.2:-86721149 | MS.gene014973:CDS |
| GGTAATAATAATAAGCATCA+AGG | 0.546427 | 3.2:-86721832 | MS.gene014973:CDS |
| AAGCGATCCAAGTGAAAACC+TGG | 0.546867 | 3.2:+86721005 | None:intergenic |
| CATGATCTTGGCCATGGTGA+TGG | 0.547727 | 3.2:+86721740 | None:intergenic |
| TAAAGAAATTACCAATGAGA+TGG | 0.550653 | 3.2:-86720492 | MS.gene014973:CDS |
| CTTCTGTAATAATTGCTGAT+CGG | 0.555225 | 3.2:+86719404 | None:intergenic |
| TCAGCCTCTTCCATTAGTGG+AGG | 0.556564 | 3.2:+86720746 | None:intergenic |
| GTAATGCATCCATTTGATGT+TGG | 0.558028 | 3.2:-86719621 | MS.gene014973:CDS |
| AAACTAGGATGCCAGTATTG+TGG | 0.562729 | 3.2:+86719138 | None:intergenic |
| TGGGCCTCCACTAATGGAAG+AGG | 0.563345 | 3.2:-86720750 | MS.gene014973:CDS |
| GGTTTATTATTCGGTGAACG+TGG | 0.564860 | 3.2:+86721430 | None:intergenic |
| CTTCCTTAATCAAGAACCTA+CGG | 0.566575 | 3.2:+86720061 | None:intergenic |
| GTTTCTGCCTGTGCCAGTAG+GGG | 0.569425 | 3.2:+86720021 | None:intergenic |
| GTTTGTGTTTGTGTGCATCA+CGG | 0.570532 | 3.2:-86721239 | MS.gene014973:CDS |
| GCGTAAGAGACTAACGACTA+AGG | 0.572543 | 3.2:-86721275 | MS.gene014973:CDS |
| AAAATCTTTAGCAGCTTGGG+TGG | 0.582100 | 3.2:-86719983 | MS.gene014973:intron |
| TGCATAGGGTTGTGAATGGA+TGG | 0.590999 | 3.2:-86721853 | None:intergenic |
| GAAGAAAACAGAAGTGGTGG+TGG | 0.592280 | 3.2:-86721788 | MS.gene014973:CDS |
| AATAAATTAGGTATTTGGAG+AGG | 0.593844 | 3.2:-86719164 | MS.gene014973:intron |
| GCGGAGAAGTGAATTAGTGA+TGG | 0.596207 | 3.2:-86719016 | MS.gene014973:CDS |
| CAAGTACTAGCTGCGATGAG+AGG | 0.600062 | 3.2:+86719703 | None:intergenic |
| TTCACTGCCAAACTGAAACT+AGG | 0.601450 | 3.2:+86719123 | None:intergenic |
| GTGGTGGCAATTTCAAATGT+GGG | 0.602248 | 3.2:-86721772 | MS.gene014973:CDS |
| GGACCTGGAGATGCCATCAA+AGG | 0.602592 | 3.2:+86721355 | None:intergenic |
| GATCAAAGAAAGATTTGACA+TGG | 0.605754 | 3.2:+86720819 | None:intergenic |
| ATATTCTTACTTGCAGCTAG+GGG | 0.610117 | 3.2:+86720424 | None:intergenic |
| ATGGAAGAGGCTGAGAAAGT+CGG | 0.617688 | 3.2:-86720737 | MS.gene014973:CDS |
| CATGATCATGATCTTGGCCA+TGG | 0.624053 | 3.2:+86721734 | None:intergenic |
| GGTGGTGGCAATTTCAAATG+TGG | 0.624592 | 3.2:-86721773 | MS.gene014973:CDS |
| GTGGCAATTTCAAATGTGGG+TGG | 0.626198 | 3.2:-86721769 | MS.gene014973:CDS |
| AATGAACTTTCAAGAATTTG+GGG | 0.631242 | 3.2:-86719049 | MS.gene014973:CDS |
| AGGGATGAACCTTATTTCAG+GGG | 0.633053 | 3.2:+86721648 | None:intergenic |
| AGGTGGTGAAGTGAGCATGA+TGG | 0.635799 | 3.2:-86721812 | MS.gene014973:CDS |
| GGGGAAGCACAGTTTAAAGG+TGG | 0.637546 | 3.2:+86721667 | None:intergenic |
| TACTGGCACAGGCAGAAACA+GGG | 0.640432 | 3.2:-86720017 | MS.gene014973:CDS |
| CGTTCACCGAATAATAAACC+CGG | 0.641887 | 3.2:-86721427 | MS.gene014973:CDS |
| GCCAGTAGGGGAAATACCAA+AGG | 0.642812 | 3.2:+86720033 | None:intergenic |
| AGATACTACCTTATTCCGCA+AGG | 0.644323 | 3.2:-86718961 | MS.gene014973:CDS |
| AGGTGTTCATCTCAGACACA+TGG | 0.650077 | 3.2:-86718941 | MS.gene014973:CDS |
| AGTTACAGGAGTCCTAGTAG+TGG | 0.671864 | 3.2:-86719784 | MS.gene014973:CDS |
| AATAATAATAAGCATCAAGG+TGG | 0.672497 | 3.2:-86721829 | MS.gene014973:CDS |
| TCGACGAGGATGAACTCCGT+AGG | 0.674026 | 3.2:-86720077 | MS.gene014973:CDS |
| GATGGAGAAGAAAACAGAAG+TGG | 0.675509 | 3.2:-86721794 | MS.gene014973:CDS |
| CTTAAGCGACACTAAAACAG+CGG | 0.676974 | 3.2:-86719826 | MS.gene014973:CDS |
| TAGTGGTGACCATAGTAGTG+TGG | 0.677764 | 3.2:-86719767 | MS.gene014973:CDS |
| GGAGAAGAAAACAGAAGTGG+TGG | 0.683682 | 3.2:-86721791 | MS.gene014973:CDS |
| GAAGAGGCTGAGAAAGTCGG+CGG | 0.686077 | 3.2:-86720734 | MS.gene014973:CDS |
| AATTTGGGGAGAAGACCAAG+CGG | 0.720680 | 3.2:-86719035 | MS.gene014973:CDS |
| TGTCTGAGATGAACACCTTG+CGG | 0.733097 | 3.2:+86718946 | None:intergenic |
| TATGAATAGGGACATCGACG+AGG | 0.735291 | 3.2:-86720091 | MS.gene014973:intron |
| TAGATGCAGTGATGAACTCG+AGG | 0.741103 | 3.2:-86720577 | MS.gene014973:CDS |
| GGTGGAGATAGCCATCACCA+TGG | 0.745710 | 3.2:-86721751 | MS.gene014973:CDS |
| GGTGACTTTGTAGAGTAACG+AGG | 0.754563 | 3.2:+86721688 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTATTCTTTTAATAAATT+AGG | - | chr3.2:86721577-86721596 | MS.gene014973:CDS | 10.0% |
| !!! | TAACATTTCAAATATTTTTT+GGG | - | chr3.2:86721540-86721559 | MS.gene014973:CDS | 10.0% |
| !! | AAATGTAAATAAGATTAAGA+TGG | - | chr3.2:86721662-86721681 | MS.gene014973:CDS | 15.0% |
| !! | AATGTAAATAAGATTAAGAT+GGG | - | chr3.2:86721663-86721682 | MS.gene014973:CDS | 15.0% |
| !!! | CTAACATTTCAAATATTTTT+TGG | - | chr3.2:86721539-86721558 | MS.gene014973:CDS | 15.0% |
| !!! | CTTTTAATAAATTAGGTATT+TGG | - | chr3.2:86721584-86721603 | MS.gene014973:CDS | 15.0% |
| !! | AAGAAAGTTGAATTTAGTAA+AGG | - | chr3.2:86719452-86719471 | MS.gene014973:CDS | 20.0% |
| !! | CTTGAAACTTAATAATGAAA+AGG | - | chr3.2:86721294-86721313 | MS.gene014973:CDS | 20.0% |
| !! | TAAACAACTTAATTAAGTGT+TGG | + | chr3.2:86720565-86720584 | None:intergenic | 20.0% |
| !!! | ATAATTTTGAAGGCATTAAT+AGG | + | chr3.2:86721229-86721248 | None:intergenic | 20.0% |
| ! | AAAGAAAGAGGTTATTGATA+TGG | - | chr3.2:86720096-86720115 | MS.gene014973:intron | 25.0% |
| ! | AAGTAACATTCTCTTCTAAA+AGG | + | chr3.2:86719259-86719278 | None:intergenic | 25.0% |
| ! | AATAAATTAGGTATTTGGAG+AGG | - | chr3.2:86721589-86721608 | MS.gene014973:CDS | 25.0% |
| ! | AATAATAATAAGCATCAAGG+TGG | - | chr3.2:86718924-86718943 | MS.gene014973:CDS | 25.0% |
| ! | AATGAACTTTCAAGAATTTG+GGG | - | chr3.2:86721704-86721723 | MS.gene014973:CDS | 25.0% |
| ! | ACAATGAACTTTCAAGAATT+TGG | - | chr3.2:86721702-86721721 | MS.gene014973:CDS | 25.0% |
| ! | AGAGAAGAGTAAATACAATT+AGG | + | chr3.2:86720599-86720618 | None:intergenic | 25.0% |
| ! | AGCTAATTGTATAAGTAATC+TGG | - | chr3.2:86721462-86721481 | MS.gene014973:CDS | 25.0% |
| ! | CAATGAACTTTCAAGAATTT+GGG | - | chr3.2:86721703-86721722 | MS.gene014973:CDS | 25.0% |
| ! | CACTGAATGAAAAAATAAAG+AGG | - | chr3.2:86721437-86721456 | MS.gene014973:CDS | 25.0% |
| ! | GGTAATAATAATAAGCATCA+AGG | - | chr3.2:86718921-86718940 | MS.gene014973:CDS | 25.0% |
| ! | TAAAGAAATTACCAATGAGA+TGG | - | chr3.2:86720261-86720280 | MS.gene014973:intron | 25.0% |
| ! | TATACACTTCTCTTTGTTAA+GGG | - | chr3.2:86720530-86720549 | MS.gene014973:CDS | 25.0% |
| ! | TTATACACTTCTCTTTGTTA+AGG | - | chr3.2:86720529-86720548 | MS.gene014973:CDS | 25.0% |
| ! | TTCTTGTATATGATTTCATC+AGG | + | chr3.2:86719437-86719456 | None:intergenic | 25.0% |
| !! | ATCTTACAAGAGTTTTTCTT+GGG | + | chr3.2:86719178-86719197 | None:intergenic | 25.0% |
| !! | GAACTTTTTGTTGAAGAAAA+AGG | - | chr3.2:86719691-86719710 | MS.gene014973:CDS | 25.0% |
| AAAATGCTCCCATTATGAAT+AGG | - | chr3.2:86720649-86720668 | MS.gene014973:CDS | 30.0% | |
| AAATGCTCCCATTATGAATA+GGG | - | chr3.2:86720650-86720669 | MS.gene014973:CDS | 30.0% | |
| AACAGTTCTATAAACTGTTC+CGG | + | chr3.2:86719348-86719367 | None:intergenic | 30.0% | |
| AACATTCCTGAAAACGTAAT+AGG | + | chr3.2:86720302-86720321 | None:intergenic | 30.0% | |
| ACAAAAATGTTCCAATGAGA+AGG | + | chr3.2:86719871-86719890 | None:intergenic | 30.0% | |
| ACTGGAAAATACAGAGATTA+TGG | + | chr3.2:86720870-86720889 | None:intergenic | 30.0% | |
| ATATATTCTTACTTGCAGCT+AGG | + | chr3.2:86720334-86720353 | None:intergenic | 30.0% | |
| ATCTAGAGAATTAGAGATTG+TGG | + | chr3.2:86720206-86720225 | None:intergenic | 30.0% | |
| ATTACTTGTAGAGTTGTTGA+TGG | - | chr3.2:86720361-86720380 | MS.gene014973:intron | 30.0% | |
| CAAAAATGTTCCAATGAGAA+GGG | + | chr3.2:86719870-86719889 | None:intergenic | 30.0% | |
| CAAAATTATCTTGCAGCTAT+TGG | - | chr3.2:86721240-86721259 | MS.gene014973:CDS | 30.0% | |
| CAATTAAACAAGCTAGTTAC+AGG | - | chr3.2:86720955-86720974 | MS.gene014973:CDS | 30.0% | |
| CACTTAAGATAACTTGAATC+AGG | + | chr3.2:86721840-86721859 | None:intergenic | 30.0% | |
| CTAAAAGGATTCCATCAATA+GGG | + | chr3.2:86719244-86719263 | None:intergenic | 30.0% | |
| CTTCTGTAATAATTGCTGAT+CGG | + | chr3.2:86721352-86721371 | None:intergenic | 30.0% | |
| GATCAAAGAAAGATTTGACA+TGG | + | chr3.2:86719937-86719956 | None:intergenic | 30.0% | |
| TAACAGTTGAGGAACTAAAA+AGG | - | chr3.2:86719555-86719574 | MS.gene014973:intron | 30.0% | |
| TAAGCATTTGCAAGATTGTA+TGG | - | chr3.2:86720431-86720450 | MS.gene014973:intron | 30.0% | |
| TATATTCTTACTTGCAGCTA+GGG | + | chr3.2:86720333-86720352 | None:intergenic | 30.0% | |
| TATTACAGAAGCCCTAATAT+GGG | - | chr3.2:86721361-86721380 | MS.gene014973:CDS | 30.0% | |
| TCTAAAAGGATTCCATCAAT+AGG | + | chr3.2:86719245-86719264 | None:intergenic | 30.0% | |
| TGTACTCCTGAAACTAAAAT+GGG | + | chr3.2:86720059-86720078 | None:intergenic | 30.0% | |
| TGTTCACCAAATCTTGATTT+GGG | + | chr3.2:86719215-86719234 | None:intergenic | 30.0% | |
| TTACAGATTGAGATTCTGTT+TGG | - | chr3.2:86720843-86720862 | MS.gene014973:CDS | 30.0% | |
| TTATTACAGAAGCCCTAATA+TGG | - | chr3.2:86721360-86721379 | MS.gene014973:CDS | 30.0% | |
| TTGTACTCCTGAAACTAAAA+TGG | + | chr3.2:86720060-86720079 | None:intergenic | 30.0% | |
| TTGTTCACCAAATCTTGATT+TGG | + | chr3.2:86719216-86719235 | None:intergenic | 30.0% | |
| ! | GACATTGTTGCTAAAGATTT+TGG | - | chr3.2:86719901-86719920 | MS.gene014973:intron | 30.0% |
| ! | GATCTTACAAGAGTTTTTCT+TGG | + | chr3.2:86719179-86719198 | None:intergenic | 30.0% |
| ! | TAGCTGCAAGATAATTTTGA+AGG | + | chr3.2:86721239-86721258 | None:intergenic | 30.0% |
| ! | TCTCATTGGAACATTTTTGT+GGG | - | chr3.2:86719871-86719890 | MS.gene014973:intron | 30.0% |
| ! | TCTTACAAGAGTTTTTCTTG+GGG | + | chr3.2:86719177-86719196 | None:intergenic | 30.0% |
| ! | TTCTCATTGGAACATTTTTG+TGG | - | chr3.2:86719870-86719889 | MS.gene014973:intron | 30.0% |
| ! | TTTGAAATGTTAGCCGAATA+TGG | + | chr3.2:86721532-86721551 | None:intergenic | 30.0% |
| !! | ATAATTGCTGATCGGTTTTA+TGG | + | chr3.2:86721344-86721363 | None:intergenic | 30.0% |
| !! | TTCATGGACTATGAAGATTT+TGG | - | chr3.2:86720153-86720172 | MS.gene014973:intron | 30.0% |
| AACTAAAAAGGACGGAGATT+TGG | - | chr3.2:86719567-86719586 | MS.gene014973:intron | 35.0% | |
| ACAGTTCTATAAACTGTTCC+GGG | + | chr3.2:86719347-86719366 | None:intergenic | 35.0% | |
| ACTGTTCCGGGTTTATTATT+CGG | + | chr3.2:86719335-86719354 | None:intergenic | 35.0% | |
| AGCAAGAGAAAGTTTCTTCA+TGG | - | chr3.2:86720137-86720156 | MS.gene014973:intron | 35.0% | |
| AGTTGAGGAACTAAAAAGGA+CGG | - | chr3.2:86719559-86719578 | MS.gene014973:intron | 35.0% | |
| ATATTCTTACTTGCAGCTAG+GGG | + | chr3.2:86720332-86720351 | None:intergenic | 35.0% | |
| CAGAAAATCTTTAGCAGCTT+GGG | - | chr3.2:86720767-86720786 | MS.gene014973:CDS | 35.0% | |
| CATTACAAACACGAAGATGA+TGG | + | chr3.2:86721118-86721137 | None:intergenic | 35.0% | |
| CTTCCTTAATCAAGAACCTA+CGG | + | chr3.2:86720695-86720714 | None:intergenic | 35.0% | |
| GATTAAGGAAGAAGTTCCTT+TGG | - | chr3.2:86720704-86720723 | MS.gene014973:CDS | 35.0% | |
| GTAATGCATCCATTTGATGT+TGG | - | chr3.2:86721132-86721151 | MS.gene014973:CDS | 35.0% | |
| GTTCTTGATATACCTTCAAC+TGG | + | chr3.2:86720888-86720907 | None:intergenic | 35.0% | |
| TAAAGGTAGCACAAAGAAAG+AGG | - | chr3.2:86720084-86720103 | MS.gene014973:CDS | 35.0% | |
| TCAACTCATGATCATGATCT+TGG | + | chr3.2:86719028-86719047 | None:intergenic | 35.0% | |
| TCGATGTCCCTATTCATAAT+GGG | + | chr3.2:86720660-86720679 | None:intergenic | 35.0% | |
| TCTAAGCCCAAATCAAGATT+TGG | - | chr3.2:86719206-86719225 | MS.gene014973:intron | 35.0% | |
| TTTCTTTGTGCTACCTTTAC+TGG | + | chr3.2:86720083-86720102 | None:intergenic | 35.0% | |
| ! | AATGTATCCAGGTTTTCACT+TGG | - | chr3.2:86719741-86719760 | MS.gene014973:CDS | 35.0% |
| ! | AGATTTTGGATGGTGTAACA+TGG | - | chr3.2:86719834-86719853 | MS.gene014973:CDS | 35.0% |
| ! | CTTACTTGTGTTGATCTACT+AGG | - | chr3.2:86720407-86720426 | MS.gene014973:intron | 35.0% |
| ! | GTAAGGTTTTCATTTGTAGC+AGG | + | chr3.2:86719155-86719174 | None:intergenic | 35.0% |
| ! | TAAATTGGCCACGAAGATTT+TGG | - | chr3.2:86719820-86719839 | MS.gene014973:CDS | 35.0% |
| ! | TAGGGATGAACCTTATTTCA+GGG | + | chr3.2:86719109-86719128 | None:intergenic | 35.0% |
| ! | TCTCTGTATTTTCCAGTTGA+AGG | - | chr3.2:86720873-86720892 | MS.gene014973:CDS | 35.0% |
| !! | AGAGTTGTTGATGGTTGTAA+GGG | - | chr3.2:86720370-86720389 | MS.gene014973:intron | 35.0% |
| !! | ATGTTTTATAGATGGTGTCG+AGG | - | chr3.2:86721161-86721180 | MS.gene014973:CDS | 35.0% |
| !! | TAGAGTTGTTGATGGTTGTA+AGG | - | chr3.2:86720369-86720388 | MS.gene014973:intron | 35.0% |
| !!! | AAGGTGCTTTATTTTGTCCA+TGG | - | chr3.2:86719710-86719729 | MS.gene014973:CDS | 35.0% |
| AAAATCTTTAGCAGCTTGGG+TGG | - | chr3.2:86720770-86720789 | MS.gene014973:CDS | 40.0% | |
| AAACTAGGATGCCAGTATTG+TGG | + | chr3.2:86721618-86721637 | None:intergenic | 40.0% | |
| ACTCCGTAGGTTCTTGATTA+AGG | - | chr3.2:86720689-86720708 | MS.gene014973:CDS | 40.0% | |
| AGATACTACCTTATTCCGCA+AGG | - | chr3.2:86721792-86721811 | MS.gene014973:CDS | 40.0% | |
| AGGATTCCATCAATAGGGTA+AGG | + | chr3.2:86719239-86719258 | None:intergenic | 40.0% | |
| AGTAGTGTGGCTTCTTCTAA+TGG | - | chr3.2:86720999-86721018 | MS.gene014973:CDS | 40.0% | |
| CCAGAAAATCTTTAGCAGCT+TGG | - | chr3.2:86720766-86720785 | MS.gene014973:CDS | 40.0% | |
| CGTTCACCGAATAATAAACC+CGG | - | chr3.2:86719326-86719345 | MS.gene014973:CDS | 40.0% | |
| CTACACTGTCACCCATATTA+GGG | + | chr3.2:86721375-86721394 | None:intergenic | 40.0% | |
| CTTAAGCGACACTAAAACAG+CGG | - | chr3.2:86720927-86720946 | MS.gene014973:CDS | 40.0% | |
| GAACAACCTTACCCTATTGA+TGG | - | chr3.2:86719230-86719249 | MS.gene014973:intron | 40.0% | |
| GAGTCTGCAGAACATATTGA+TGG | + | chr3.2:86719979-86719998 | None:intergenic | 40.0% | |
| GATGGAGAAGAAAACAGAAG+TGG | - | chr3.2:86718959-86718978 | MS.gene014973:CDS | 40.0% | |
| GGATACATTTCTTCAGTCCA+TGG | + | chr3.2:86719730-86719749 | None:intergenic | 40.0% | |
| GTCGATGTCCCTATTCATAA+TGG | + | chr3.2:86720661-86720680 | None:intergenic | 40.0% | |
| GTGGCATGTTAGTTACCAAA+TGG | - | chr3.2:86719636-86719655 | MS.gene014973:CDS | 40.0% | |
| GTGGTGGCAATTTCAAATGT+GGG | - | chr3.2:86718981-86719000 | MS.gene014973:CDS | 40.0% | |
| GTTTGTGTTTGTGTGCATCA+CGG | - | chr3.2:86719514-86719533 | MS.gene014973:intron | 40.0% | |
| TACACCATCCAAAATCTTCG+TGG | + | chr3.2:86719831-86719850 | None:intergenic | 40.0% | |
| TAGAAGAAGCCACACTACTA+TGG | + | chr3.2:86720998-86721017 | None:intergenic | 40.0% | |
| TAGTTTCAGTTTGGCAGTGA+AGG | - | chr3.2:86721632-86721651 | MS.gene014973:CDS | 40.0% | |
| TCTACACTGTCACCCATATT+AGG | + | chr3.2:86721376-86721395 | None:intergenic | 40.0% | |
| TGGACTGAAGAAATGTATCC+AGG | - | chr3.2:86719730-86719749 | MS.gene014973:CDS | 40.0% | |
| TGGAGTCGAACGATCTAAAT+TGG | - | chr3.2:86719805-86719824 | MS.gene014973:CDS | 40.0% | |
| TTCACTGCCAAACTGAAACT+AGG | + | chr3.2:86721633-86721652 | None:intergenic | 40.0% | |
| TTTATGGCTAGGACAGAGTT+TGG | + | chr3.2:86721328-86721347 | None:intergenic | 40.0% | |
| TTTGTGTTTGTGTGCATCAC+GGG | - | chr3.2:86719515-86719534 | MS.gene014973:intron | 40.0% | |
| ! | ACTCTTGTTTCCCTTCTCAT+TGG | - | chr3.2:86719857-86719876 | MS.gene014973:CDS | 40.0% |
| ! | AGGGATGAACCTTATTTCAG+GGG | + | chr3.2:86719108-86719127 | None:intergenic | 40.0% |
| ! | ATTTGTAGCAGGAGCTTTTG+GGG | + | chr3.2:86719144-86719163 | None:intergenic | 40.0% |
| ! | CAAGAGTTTTTCTTGGGGTA+AGG | + | chr3.2:86719172-86719191 | None:intergenic | 40.0% |
| ! | CATTTGTAGCAGGAGCTTTT+GGG | + | chr3.2:86719145-86719164 | None:intergenic | 40.0% |
| ! | CCAAGCTGCTAAAGATTTTC+TGG | + | chr3.2:86720769-86720788 | None:intergenic | 40.0% |
| ! | CTAGGGATGAACCTTATTTC+AGG | + | chr3.2:86719110-86719129 | None:intergenic | 40.0% |
| ! | GGCGATCGATGTTTTATAGA+TGG | - | chr3.2:86721153-86721172 | MS.gene014973:CDS | 40.0% |
| ! | GGTTTATTATTCGGTGAACG+TGG | + | chr3.2:86719326-86719345 | None:intergenic | 40.0% |
| ! | TCATTTGTAGCAGGAGCTTT+TGG | + | chr3.2:86719146-86719165 | None:intergenic | 40.0% |
| ! | TGGGTGCTTTTAATCAATCG+TGG | - | chr3.2:86719785-86719804 | MS.gene014973:CDS | 40.0% |
| ! | TTCAGGAGTACAACCAGTAA+AGG | - | chr3.2:86720067-86720086 | MS.gene014973:CDS | 40.0% |
| !! | CTTGTGATGGTGACATTTTG+TGG | - | chr3.2:86719617-86719636 | MS.gene014973:CDS | 40.0% |
| !! | GAGCTTTTGGGGGTTTATTT+GGG | + | chr3.2:86719133-86719152 | None:intergenic | 40.0% |
| !! | GTACTTGCTGCTTTCATGTT+TGG | - | chr3.2:86721066-86721085 | MS.gene014973:CDS | 40.0% |
| !! | GTTGGCTAGTTTAACAGTTG+AGG | - | chr3.2:86719544-86719563 | MS.gene014973:intron | 40.0% |
| !!! | GCACTTCCCATTTTAGTTTC+AGG | - | chr3.2:86720050-86720069 | MS.gene014973:CDS | 40.0% |
| AAGCGATCCAAGTGAAAACC+TGG | + | chr3.2:86719751-86719770 | None:intergenic | 45.0% | |
| AATTTGGGGAGAAGACCAAG+CGG | - | chr3.2:86721718-86721737 | MS.gene014973:CDS | 45.0% | |
| ACGACGTCAGCAGAGAAAAT+CGG | - | chr3.2:86721412-86721431 | MS.gene014973:CDS | 45.0% | |
| ACTCGACTGTTGGCCATATT+CGG | - | chr3.2:86721516-86721535 | MS.gene014973:CDS | 45.0% | |
| ACTGTGCTTCCCCTGAAATA+AGG | - | chr3.2:86719096-86719115 | MS.gene014973:CDS | 45.0% | |
| AGCAGTTGCTTCCATCTCAT+TGG | + | chr3.2:86720275-86720294 | None:intergenic | 45.0% | |
| AGGTGTTCATCTCAGACACA+TGG | - | chr3.2:86721812-86721831 | MS.gene014973:CDS | 45.0% | |
| AGTTACAGGAGTCCTAGTAG+TGG | - | chr3.2:86720969-86720988 | MS.gene014973:CDS | 45.0% | |
| ATATGGCCAACAGTCGAGTT+AGG | + | chr3.2:86721515-86721534 | None:intergenic | 45.0% | |
| ATGGAAGAGGCTGAGAAAGT+CGG | - | chr3.2:86720016-86720035 | MS.gene014973:CDS | 45.0% | |
| ATGTTCTGCAGACTCTCTCT+GGG | - | chr3.2:86719984-86720003 | MS.gene014973:CDS | 45.0% | |
| CACTAATTCACTTCTCCGCT+TGG | + | chr3.2:86721736-86721755 | None:intergenic | 45.0% | |
| CACTCCTAGAACACCTTTGA+TGG | - | chr3.2:86719385-86719404 | MS.gene014973:CDS | 45.0% | |
| CATCGATCGCCAACATCAAA+TGG | + | chr3.2:86721144-86721163 | None:intergenic | 45.0% | |
| CATGATCATGATCTTGGCCA+TGG | + | chr3.2:86719022-86719041 | None:intergenic | 45.0% | |
| CTACTATGGTCACCACTACT+AGG | + | chr3.2:86720984-86721003 | None:intergenic | 45.0% | |
| CTGGCATCCTAGTTTCAGTT+TGG | - | chr3.2:86721623-86721642 | MS.gene014973:CDS | 45.0% | |
| GAAGAAAACAGAAGTGGTGG+TGG | - | chr3.2:86718965-86718984 | MS.gene014973:CDS | 45.0% | |
| GACAATGTGCGTGAACCATT+TGG | + | chr3.2:86719654-86719673 | None:intergenic | 45.0% | |
| GATGAACACCTTGCGGAATA+AGG | + | chr3.2:86721803-86721822 | None:intergenic | 45.0% | |
| GCGGAGAAGTGAATTAGTGA+TGG | - | chr3.2:86721737-86721756 | MS.gene014973:CDS | 45.0% | |
| GCGTAAGAGACTAACGACTA+AGG | - | chr3.2:86719478-86719497 | MS.gene014973:CDS | 45.0% | |
| GGAGAAGAAAACAGAAGTGG+TGG | - | chr3.2:86718962-86718981 | MS.gene014973:CDS | 45.0% | |
| GGTGAACGTGGTGCTTTATA+TGG | + | chr3.2:86719314-86719333 | None:intergenic | 45.0% | |
| GGTGACTTTGTAGAGTAACG+AGG | + | chr3.2:86719068-86719087 | None:intergenic | 45.0% | |
| GTGGCAATTTCAAATGTGGG+TGG | - | chr3.2:86718984-86719003 | MS.gene014973:CDS | 45.0% | |
| TAGATGCAGTGATGAACTCG+AGG | - | chr3.2:86720176-86720195 | MS.gene014973:intron | 45.0% | |
| TAGTGGTGACCATAGTAGTG+TGG | - | chr3.2:86720986-86721005 | MS.gene014973:CDS | 45.0% | |
| TATGAATAGGGACATCGACG+AGG | - | chr3.2:86720662-86720681 | MS.gene014973:CDS | 45.0% | |
| TATGGCCAACAGTCGAGTTA+GGG | + | chr3.2:86721514-86721533 | None:intergenic | 45.0% | |
| TATGTTCTGCAGACTCTCTC+TGG | - | chr3.2:86719983-86720002 | MS.gene014973:intron | 45.0% | |
| TCCTTTGGTATTTCCCCTAC+TGG | - | chr3.2:86720719-86720738 | MS.gene014973:CDS | 45.0% | |
| TGGAGAGGAATCCACAATAC+TGG | - | chr3.2:86721604-86721623 | MS.gene014973:CDS | 45.0% | |
| TTCTCAGCCTCTTCCATTAG+TGG | + | chr3.2:86720013-86720032 | None:intergenic | 45.0% | |
| TTGGGGGTTTATTTGGGCTA+GGG | + | chr3.2:86719127-86719146 | None:intergenic | 45.0% | |
| TTTGGGGGTTTATTTGGGCT+AGG | + | chr3.2:86719128-86719147 | None:intergenic | 45.0% | |
| ! | AAGGACGGAGATTTGGAGTT+TGG | - | chr3.2:86719574-86719593 | MS.gene014973:intron | 45.0% |
| ! | AGATTTGGAGTTTGGGGCTT+TGG | - | chr3.2:86719582-86719601 | MS.gene014973:intron | 45.0% |
| ! | AGGACGGAGATTTGGAGTTT+GGG | - | chr3.2:86719575-86719594 | MS.gene014973:intron | 45.0% |
| ! | CTGCTGCCTATTACGTTTTC+AGG | - | chr3.2:86720293-86720312 | MS.gene014973:intron | 45.0% |
| ! | GATGGTTGTAAGGGCATGTT+TGG | - | chr3.2:86720379-86720398 | MS.gene014973:intron | 45.0% |
| ! | GGTGGTGGCAATTTCAAATG+TGG | - | chr3.2:86718980-86718999 | MS.gene014973:CDS | 45.0% |
| ! | GGTTTTCACTTGGATCGCTT+TGG | - | chr3.2:86719751-86719770 | MS.gene014973:CDS | 45.0% |
| ! | TCAGGGGAAGCACAGTTTAA+AGG | + | chr3.2:86719092-86719111 | None:intergenic | 45.0% |
| ! | TGTCTGAGATGAACACCTTG+CGG | + | chr3.2:86721810-86721829 | None:intergenic | 45.0% |
| ! | TTGGCCACGAAGATTTTGGA+TGG | - | chr3.2:86719824-86719843 | MS.gene014973:CDS | 45.0% |
| ! | TTTGTAGCAGGAGCTTTTGG+GGG | + | chr3.2:86719143-86719162 | None:intergenic | 45.0% |
| !! | CGCTTTGGTTCTACTCACAT+GGG | - | chr3.2:86719766-86719785 | MS.gene014973:CDS | 45.0% |
| !! | GATGCCATCAAAGGTGTTCT+AGG | + | chr3.2:86719392-86719411 | None:intergenic | 45.0% |
| !! | GGAGCTTTTGGGGGTTTATT+TGG | + | chr3.2:86719134-86719153 | None:intergenic | 45.0% |
| !! | TCGCTTTGGTTCTACTCACA+TGG | - | chr3.2:86719765-86719784 | MS.gene014973:CDS | 45.0% |
| !! | TGCTGATCGGTTTTATGGCT+AGG | + | chr3.2:86721339-86721358 | None:intergenic | 45.0% |
| !!! | CGCTGTTTTAGTGTCGCTTA+AGG | + | chr3.2:86720929-86720948 | None:intergenic | 45.0% |
| AGGTGGTGAAGTGAGCATGA+TGG | - | chr3.2:86718941-86718960 | MS.gene014973:CDS | 50.0% | |
| ATGGCCAACAGTCGAGTTAG+GGG | + | chr3.2:86721513-86721532 | None:intergenic | 50.0% | |
| CAAGTACTAGCTGCGATGAG+AGG | + | chr3.2:86721053-86721072 | None:intergenic | 50.0% | |
| CATGATCTTGGCCATGGTGA+TGG | + | chr3.2:86719016-86719035 | None:intergenic | 50.0% | |
| CTTTAGCAGCTTGGGTGGTA+AGG | - | chr3.2:86720775-86720794 | MS.gene014973:CDS | 50.0% | |
| GAGGTGGTGTATGCTTGTGA+TGG | - | chr3.2:86719604-86719623 | MS.gene014973:CDS | 50.0% | |
| GCCAGTAGGGGAAATACCAA+AGG | + | chr3.2:86720723-86720742 | None:intergenic | 50.0% | |
| TACTGGCACAGGCAGAAACA+GGG | - | chr3.2:86720736-86720755 | MS.gene014973:CDS | 50.0% | |
| TCAGCCTCTTCCATTAGTGG+AGG | + | chr3.2:86720010-86720029 | None:intergenic | 50.0% | |
| ! | ACACCTTTGATGGCATCTCC+AGG | - | chr3.2:86719395-86719414 | MS.gene014973:CDS | 50.0% |
| ! | GGACGGAGATTTGGAGTTTG+GGG | - | chr3.2:86719576-86719595 | MS.gene014973:intron | 50.0% |
| ! | GGGGAAGCACAGTTTAAAGG+TGG | + | chr3.2:86719089-86719108 | None:intergenic | 50.0% |
| ! | TGTTTCTGCCTGTGCCAGTA+GGG | + | chr3.2:86720736-86720755 | None:intergenic | 50.0% |
| ! | TTTGGAGTTTGGGGCTTTGG+AGG | - | chr3.2:86719585-86719604 | MS.gene014973:intron | 50.0% |
| CTACTGGCACAGGCAGAAAC+AGG | - | chr3.2:86720735-86720754 | MS.gene014973:CDS | 55.0% | |
| CTCACCCCTAACTCGACTGT+TGG | - | chr3.2:86721506-86721525 | MS.gene014973:CDS | 55.0% | |
| GAAGAGGCTGAGAAAGTCGG+CGG | - | chr3.2:86720019-86720038 | MS.gene014973:CDS | 55.0% | |
| GGACCTGGAGATGCCATCAA+AGG | + | chr3.2:86719401-86719420 | None:intergenic | 55.0% | |
| GGTATTTCCCCTACTGGCAC+AGG | - | chr3.2:86720725-86720744 | MS.gene014973:CDS | 55.0% | |
| GGTGGAGATAGCCATCACCA+TGG | - | chr3.2:86719002-86719021 | MS.gene014973:CDS | 55.0% | |
| GTTTCTGCCTGTGCCAGTAG+GGG | + | chr3.2:86720735-86720754 | None:intergenic | 55.0% | |
| TCATCAGGATCCTCACCAGC+TGG | + | chr3.2:86719422-86719441 | None:intergenic | 55.0% | |
| TCGACGAGGATGAACTCCGT+AGG | - | chr3.2:86720676-86720695 | MS.gene014973:CDS | 55.0% | |
| TCTCTCTGGGCCTCCACTAA+TGG | - | chr3.2:86719997-86720016 | MS.gene014973:CDS | 55.0% | |
| TGGGCCTCCACTAATGGAAG+AGG | - | chr3.2:86720003-86720022 | MS.gene014973:CDS | 55.0% | |
| ! | GTGCATCACGGGTAGCTTGT+TGG | - | chr3.2:86719526-86719545 | MS.gene014973:intron | 55.0% |
| !! | CTGTTTCTGCCTGTGCCAGT+AGG | + | chr3.2:86720737-86720756 | None:intergenic | 55.0% |
| ATCTCCAGGTCCAGCTGGTG+AGG | - | chr3.2:86719409-86719428 | MS.gene014973:CDS | 60.0% | |
| ATGGCATCTCCAGGTCCAGC+TGG | - | chr3.2:86719404-86719423 | MS.gene014973:CDS | 60.0% | |
| !! | GGAGTTTGGGGCTTTGGAGG+TGG | - | chr3.2:86719588-86719607 | MS.gene014973:intron | 60.0% |
| GGATCCTCACCAGCTGGACC+TGG | + | chr3.2:86719416-86719435 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 86718915 | 86721860 | 86718915 | ID=MS.gene014973 |
| chr3.2 | mRNA | 86718915 | 86721860 | 86718915 | ID=MS.gene014973.t1;Parent=MS.gene014973 |
| chr3.2 | exon | 86720434 | 86721860 | 86720434 | ID=MS.gene014973.t1.exon1;Parent=MS.gene014973.t1 |
| chr3.2 | CDS | 86720434 | 86721860 | 86720434 | ID=cds.MS.gene014973.t1;Parent=MS.gene014973.t1 |
| chr3.2 | exon | 86719984 | 86720104 | 86719984 | ID=MS.gene014973.t1.exon2;Parent=MS.gene014973.t1 |
| chr3.2 | CDS | 86719984 | 86720104 | 86719984 | ID=cds.MS.gene014973.t1;Parent=MS.gene014973.t1 |
| chr3.2 | exon | 86719593 | 86719886 | 86719593 | ID=MS.gene014973.t1.exon3;Parent=MS.gene014973.t1 |
| chr3.2 | CDS | 86719593 | 86719886 | 86719593 | ID=cds.MS.gene014973.t1;Parent=MS.gene014973.t1 |
| chr3.2 | exon | 86719317 | 86719519 | 86719317 | ID=MS.gene014973.t1.exon4;Parent=MS.gene014973.t1 |
| chr3.2 | CDS | 86719317 | 86719519 | 86719317 | ID=cds.MS.gene014973.t1;Parent=MS.gene014973.t1 |
| chr3.2 | exon | 86718915 | 86719176 | 86718915 | ID=MS.gene014973.t1.exon5;Parent=MS.gene014973.t1 |
| chr3.2 | CDS | 86718915 | 86719176 | 86718915 | ID=cds.MS.gene014973.t1;Parent=MS.gene014973.t1 |
| Gene Sequence |
| Protein sequence |
