Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42681.t1 | XP_024633438.1 | 98.4 | 733 | 11 | 1 | 37 | 768 | 39 | 771 | 0.00E+00 | 1383.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42681.t1 | Q9LYG9 | 56.3 | 712 | 292 | 9 | 50 | 757 | 34 | 730 | 2.7e-207 | 723.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42681.t1 | G7J8E6 | 98.4 | 733 | 11 | 1 | 37 | 768 | 39 | 771 | 0.0e+00 | 1383.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene42681 | MS.gene42620 | PPI |
| MS.gene42681 | MS.gene32770 | PPI |
| MS.gene42681 | MS.gene062410 | PPI |
| MS.gene32770 | MS.gene42681 | PPI |
| MS.gene42681 | MS.gene97525 | PPI |
| MS.gene42681 | MS.gene42686 | PPI |
| MS.gene42681 | MS.gene014981 | PPI |
| MS.gene42681 | MS.gene42628 | PPI |
| MS.gene42681 | MS.gene42688 | PPI |
| MS.gene42681 | MS.gene42622 | PPI |
| MS.gene42681 | MS.gene014978 | PPI |
| MS.gene42681 | MS.gene74110 | PPI |
| MS.gene42681 | MS.gene32764 | PPI |
| MS.gene42681 | MS.gene014973 | PPI |
| MS.gene42681 | MS.gene32773 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42681.t1 | MTR_3g104990 | 98.054 | 771 | 12 | 2 | 1 | 768 | 1 | 771 | 0.0 | 1550 |
| MS.gene42681.t1 | MTR_3g104940 | 86.176 | 774 | 99 | 4 | 1 | 768 | 1 | 772 | 0.0 | 1300 |
| MS.gene42681.t1 | MTR_3g104920 | 80.415 | 771 | 126 | 6 | 1 | 768 | 1 | 749 | 0.0 | 1225 |
| MS.gene42681.t1 | MTR_3g104920 | 80.449 | 757 | 125 | 5 | 15 | 768 | 1 | 737 | 0.0 | 1204 |
| MS.gene42681.t1 | MTR_2g041220 | 51.053 | 760 | 322 | 15 | 19 | 757 | 15 | 745 | 0.0 | 702 |
| MS.gene42681.t1 | MTR_8g071250 | 46.528 | 576 | 285 | 10 | 195 | 760 | 129 | 691 | 1.37e-164 | 492 |
| MS.gene42681.t1 | MTR_1g113850 | 40.117 | 683 | 341 | 11 | 137 | 767 | 251 | 917 | 2.15e-158 | 484 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42681.t1 | AT5G12080 | 58.485 | 713 | 277 | 9 | 49 | 757 | 33 | 730 | 0.0 | 827 |
| MS.gene42681.t1 | AT5G12080 | 58.485 | 713 | 277 | 9 | 49 | 757 | 33 | 730 | 0.0 | 827 |
| MS.gene42681.t1 | AT5G12080 | 58.485 | 713 | 277 | 9 | 49 | 757 | 33 | 730 | 0.0 | 827 |
| MS.gene42681.t1 | AT5G19520 | 52.983 | 704 | 312 | 6 | 58 | 757 | 50 | 738 | 0.0 | 745 |
| MS.gene42681.t1 | AT5G19520 | 52.983 | 704 | 312 | 6 | 58 | 757 | 50 | 738 | 0.0 | 745 |
| MS.gene42681.t1 | AT2G17010 | 41.556 | 604 | 317 | 5 | 188 | 760 | 292 | 890 | 4.30e-158 | 482 |
| MS.gene42681.t1 | AT1G53470 | 39.625 | 694 | 357 | 12 | 115 | 760 | 181 | 860 | 1.33e-155 | 475 |
| MS.gene42681.t1 | AT3G14810 | 42.197 | 692 | 344 | 15 | 115 | 765 | 188 | 864 | 5.38e-155 | 473 |
| MS.gene42681.t1 | AT1G78610 | 42.296 | 636 | 325 | 8 | 166 | 767 | 211 | 838 | 1.21e-153 | 469 |
| MS.gene42681.t1 | AT2G17000 | 41.408 | 611 | 317 | 9 | 182 | 760 | 222 | 823 | 4.14e-144 | 444 |
| MS.gene42681.t1 | AT2G17000 | 41.408 | 611 | 317 | 9 | 182 | 760 | 222 | 823 | 5.32e-144 | 444 |
| MS.gene42681.t1 | AT3G14810 | 39.623 | 689 | 325 | 16 | 115 | 762 | 188 | 826 | 9.54e-135 | 420 |
| MS.gene42681.t1 | AT2G17010 | 35.833 | 360 | 195 | 5 | 188 | 516 | 292 | 646 | 2.32e-64 | 227 |
Find 152 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAATGAACTTTCAAGAATT+TGG | 0.059991 | 3.3:-86357981 | MS.gene42681:CDS |
| GACATTGTTGCTAAAGATTT+TGG | 0.123829 | 3.3:-86359782 | MS.gene42681:CDS |
| TTTCTTTGTGCTACCTTTAC+TGG | 0.130051 | 3.3:+86359603 | None:intergenic |
| TAAATTGGCCACGAAGATTT+TGG | 0.178672 | 3.3:-86359863 | MS.gene42681:CDS |
| TCTACACTGTCACCCATATT+AGG | 0.187404 | 3.3:+86358310 | None:intergenic |
| TCATTTGTAGCAGGAGCTTT+TGG | 0.190150 | 3.3:+86360540 | None:intergenic |
| TTGTACTCCTGAAACTAAAA+TGG | 0.194746 | 3.3:+86359626 | None:intergenic |
| CAATGAACTTTCAAGAATTT+GGG | 0.230393 | 3.3:-86357980 | MS.gene42681:CDS |
| AGATTTGGAGTTTGGGGCTT+TGG | 0.250678 | 3.3:-86360101 | MS.gene42681:CDS |
| AAGTAACATTCTCTTCTAAA+AGG | 0.256225 | 3.3:+86360427 | None:intergenic |
| TTCATGGACTATGAAGATTT+TGG | 0.258155 | 3.3:-86359530 | MS.gene42681:CDS |
| ACTCCGTAGGTTCTTGATTA+AGG | 0.262247 | 3.3:-86358994 | MS.gene42681:CDS |
| CTAGGGACGAACCTTATTTC+AGG | 0.272178 | 3.3:+86360576 | None:intergenic |
| TCAGGGGAAGCACAGTTTAA+AGG | 0.276027 | 3.3:+86360594 | None:intergenic |
| AAGGACGGAGATTTGGAGTT+TGG | 0.278610 | 3.3:-86360109 | MS.gene42681:CDS |
| GTACTTGCTGCTTTCATGTT+TGG | 0.284157 | 3.3:-86358617 | MS.gene42681:CDS |
| TTATTACAGAAGCCCTAATA+TGG | 0.287671 | 3.3:-86358323 | MS.gene42681:CDS |
| TTGTTCACCAAATCTTGATT+TGG | 0.289978 | 3.3:+86360470 | None:intergenic |
| ACTGTTCCGGGTTTATTATT+CGG | 0.295778 | 3.3:+86360351 | None:intergenic |
| TATGTTCTGCAGACTCTCTC+TGG | 0.301029 | 3.3:-86359700 | MS.gene42681:CDS |
| AACAGTTCTATAAACTGTTC+CGG | 0.312967 | 3.3:+86360338 | None:intergenic |
| TTCTCAGCCTCTTCCATTAG+TGG | 0.319988 | 3.3:+86359673 | None:intergenic |
| TGGAGTCGAACGATCTAAAT+TGG | 0.321444 | 3.3:-86359878 | MS.gene42681:CDS |
| TAACAGTTGAGGAACTAAAA+AGG | 0.321821 | 3.3:-86360128 | MS.gene42681:CDS |
| GATGAACACCTTGCGGAATA+AGG | 0.326639 | 3.3:+86357883 | None:intergenic |
| TCTAAAAGGATTCCATCAAT+AGG | 0.336245 | 3.3:+86360441 | None:intergenic |
| GGTGAACGTGGTGCTTTATA+TGG | 0.336535 | 3.3:+86360372 | None:intergenic |
| ACTGTGCTTCCCCTGAAATA+AGG | 0.336839 | 3.3:-86360587 | MS.gene42681:CDS |
| CTACTGGCACAGGCAGAAAC+AGG | 0.337087 | 3.3:-86358948 | MS.gene42681:CDS |
| TCTCTCTGGGCCTCCACTAA+TGG | 0.337430 | 3.3:-86359686 | MS.gene42681:CDS |
| CACTCCTAGAACACCTTTGA+TGG | 0.340051 | 3.3:-86360298 | MS.gene42681:CDS |
| TTTATGGCTAGGACAGAGTT+TGG | 0.349369 | 3.3:+86358358 | None:intergenic |
| CAGAAAATCTTTAGCAGCTT+GGG | 0.350080 | 3.3:-86358916 | MS.gene42681:CDS |
| AGGACGGAGATTTGGAGTTT+GGG | 0.350085 | 3.3:-86360108 | MS.gene42681:CDS |
| TGTTCACCAAATCTTGATTT+GGG | 0.359204 | 3.3:+86360471 | None:intergenic |
| TTTGGAGTTTGGGGCTTTGG+AGG | 0.367529 | 3.3:-86360098 | MS.gene42681:CDS |
| TCTAAGCCCAAATCAAGATT+TGG | 0.368072 | 3.3:-86360477 | MS.gene42681:CDS |
| AGCAAGAGAAAGTTTCTTCA+TGG | 0.373517 | 3.3:-86359546 | MS.gene42681:CDS |
| TCCTTTGGTATTTCCCCTAC+TGG | 0.375771 | 3.3:-86358964 | MS.gene42681:CDS |
| AAAGAAAGAGGTTATTGATA+TGG | 0.383412 | 3.3:-86359587 | MS.gene42681:CDS |
| AACATTCCTGAAAACGTAAT+AGG | 0.384096 | 3.3:+86359384 | None:intergenic |
| AGTAGTGTGGCTTCTTCTAA+TGG | 0.385108 | 3.3:-86358684 | MS.gene42681:CDS |
| GATGCCATCAAAGGTGTTCT+AGG | 0.387245 | 3.3:+86360294 | None:intergenic |
| TCAACTCATGATCATGATCT+TGG | 0.387525 | 3.3:+86360658 | None:intergenic |
| GGAGTTTGGGGCTTTGGAGG+TGG | 0.388035 | 3.3:-86360095 | MS.gene42681:CDS |
| CTACACTGTCACCCATATTA+GGG | 0.388576 | 3.3:+86358311 | None:intergenic |
| ACAGTTCTATAAACTGTTCC+GGG | 0.389897 | 3.3:+86360339 | None:intergenic |
| CACTTAAGATAACTTGAATC+AGG | 0.390741 | 3.3:+86357846 | None:intergenic |
| TTCTTGTATATGATTTCATC+AGG | 0.393170 | 3.3:+86360249 | None:intergenic |
| ACTCTTGTTTCCCTTCTCAT+TGG | 0.393699 | 3.3:-86359826 | MS.gene42681:CDS |
| CAATTAAACAAGCTAGTTAC+AGG | 0.398707 | 3.3:-86358728 | MS.gene42681:CDS |
| CCAGAAAATCTTTAGCAGCT+TGG | 0.399961 | 3.3:-86358917 | MS.gene42681:CDS |
| CACTAATTCACTTCTCCGCT+TGG | 0.404975 | 3.3:+86357950 | None:intergenic |
| CTGGCATCCTAGTTTCAGTT+TGG | 0.410393 | 3.3:-86358060 | MS.gene42681:CDS |
| GATTAAGGAAGAAGTTCCTT+TGG | 0.415393 | 3.3:-86358979 | MS.gene42681:CDS |
| CTACTATGGTCACCACTACT+AGG | 0.415578 | 3.3:+86358702 | None:intergenic |
| CTGTTTCTGCCTGTGCCAGT+AGG | 0.426864 | 3.3:+86358949 | None:intergenic |
| CATCGATCGCCAACATCAAA+TGG | 0.429406 | 3.3:+86358542 | None:intergenic |
| GACAATGTGCGTGAACCATT+TGG | 0.437003 | 3.3:+86360032 | None:intergenic |
| TGGAGAGGAATCCACAATAC+TGG | 0.438670 | 3.3:-86358079 | MS.gene42681:CDS |
| AGCAGTTGCTTCCATCTCAT+TGG | 0.438791 | 3.3:+86359411 | None:intergenic |
| GAGTCTGCAGAACATATTGA+TGG | 0.441671 | 3.3:+86359707 | None:intergenic |
| TGTTTCTGCCTGTGCCAGTA+GGG | 0.443402 | 3.3:+86358950 | None:intergenic |
| GAACAACCTTACCCTATTGA+TGG | 0.443872 | 3.3:-86360453 | MS.gene42681:CDS |
| TATATTCTTACTTGCAGCTA+GGG | 0.445433 | 3.3:+86359353 | None:intergenic |
| CTTGAAACTTAATAATGAAA+AGG | 0.452787 | 3.3:-86358389 | MS.gene42681:CDS |
| CTAAAAGGATTCCATCAATA+GGG | 0.453814 | 3.3:+86360442 | None:intergenic |
| ACGACGTCAGCAGAGAAAAT+CGG | 0.461578 | 3.3:-86358271 | MS.gene42681:CDS |
| TAGAAGAAGCCACACTACTA+TGG | 0.462238 | 3.3:+86358688 | None:intergenic |
| GTGCATCACGGGTAGCTTGT+TGG | 0.471724 | 3.3:-86360157 | MS.gene42681:CDS |
| ATCTAGAGAATTAGAGATTG+TGG | 0.475217 | 3.3:+86359480 | None:intergenic |
| TCGCTTTGGTTCTACTCACA+TGG | 0.480459 | 3.3:-86359918 | MS.gene42681:CDS |
| GGTATTTCCCCTACTGGCAC+AGG | 0.484922 | 3.3:-86358958 | MS.gene42681:CDS |
| TGTACTCCTGAAACTAAAAT+GGG | 0.489996 | 3.3:+86359627 | None:intergenic |
| GGATCCTCACCAGCTGGACC+TGG | 0.490344 | 3.3:+86360270 | None:intergenic |
| GTGGCATGTTAGTTACCAAA+TGG | 0.493145 | 3.3:-86360047 | MS.gene42681:CDS |
| AAGAAAGTTGAATTTAGTAA+AGG | 0.494912 | 3.3:-86360231 | MS.gene42681:CDS |
| AAATGTAAATAAGATTAAGA+TGG | 0.497083 | 3.3:-86358021 | MS.gene42681:CDS |
| ATCTCCAGGTCCAGCTGGTG+AGG | 0.497675 | 3.3:-86360274 | MS.gene42681:CDS |
| AATGTAAATAAGATTAAGAT+GGG | 0.505449 | 3.3:-86358020 | MS.gene42681:CDS |
| TAGTTTCAGTTTGGCAGTGA+AGG | 0.512844 | 3.3:-86358051 | MS.gene42681:CDS |
| TTTGTGTTTGTGTGCATCAC+GGG | 0.513377 | 3.3:-86360168 | MS.gene42681:CDS |
| CGCTTTGGTTCTACTCACAT+GGG | 0.514104 | 3.3:-86359917 | MS.gene42681:CDS |
| TGGACTGAAGAAATGTATCC+AGG | 0.514151 | 3.3:-86359953 | MS.gene42681:CDS |
| ATGGCATCTCCAGGTCCAGC+TGG | 0.514371 | 3.3:-86360279 | MS.gene42681:CDS |
| TTCAGGAGTACAACCAGTAA+AGG | 0.520751 | 3.3:-86359616 | MS.gene42681:CDS |
| ATATATTCTTACTTGCAGCT+AGG | 0.525421 | 3.3:+86359352 | None:intergenic |
| ATGTTCTGCAGACTCTCTCT+GGG | 0.525655 | 3.3:-86359699 | MS.gene42681:CDS |
| TCATCAGGATCCTCACCAGC+TGG | 0.532211 | 3.3:+86360264 | None:intergenic |
| GTTGGCTAGTTTAACAGTTG+AGG | 0.533975 | 3.3:-86360139 | MS.gene42681:CDS |
| CATTACAAACACGAAGATGA+TGG | 0.535612 | 3.3:+86358568 | None:intergenic |
| ACACCTTTGATGGCATCTCC+AGG | 0.537728 | 3.3:-86360288 | MS.gene42681:CDS |
| GGATACATTTCTTCAGTCCA+TGG | 0.539549 | 3.3:+86359956 | None:intergenic |
| TAGGGACGAACCTTATTTCA+GGG | 0.539725 | 3.3:+86360577 | None:intergenic |
| GGACGGAGATTTGGAGTTTG+GGG | 0.539859 | 3.3:-86360107 | MS.gene42681:CDS |
| TACACCATCCAAAATCTTCG+TGG | 0.540293 | 3.3:+86359855 | None:intergenic |
| TATTACAGAAGCCCTAATAT+GGG | 0.542039 | 3.3:-86358322 | MS.gene42681:CDS |
| AGGATTCCATCAATAGGGTA+AGG | 0.542280 | 3.3:+86360447 | None:intergenic |
| TAAAGGTAGCACAAAGAAAG+AGG | 0.543539 | 3.3:-86359599 | MS.gene42681:CDS |
| GAGGTGGTGTATGCTTGTGA+TGG | 0.544535 | 3.3:-86360079 | MS.gene42681:CDS |
| GGTAATAATAATAAGCATCA+AGG | 0.546427 | 3.3:-86360762 | MS.gene42681:CDS |
| AAGCGATCCAAGTGAAAACC+TGG | 0.546867 | 3.3:+86359935 | None:intergenic |
| CATGATCTTGGCCATGGTGA+TGG | 0.547727 | 3.3:+86360670 | None:intergenic |
| TAAAGAAATTACCAATGAGA+TGG | 0.550653 | 3.3:-86359422 | MS.gene42681:CDS |
| CTTCTGTAATAATTGCTGAT+CGG | 0.555225 | 3.3:+86358334 | None:intergenic |
| TCAGCCTCTTCCATTAGTGG+AGG | 0.556564 | 3.3:+86359676 | None:intergenic |
| GTAATGCATCCATTTGATGT+TGG | 0.558028 | 3.3:-86358551 | MS.gene42681:CDS |
| AAACTAGGATGCCAGTATTG+TGG | 0.562729 | 3.3:+86358068 | None:intergenic |
| TGGGCCTCCACTAATGGAAG+AGG | 0.563345 | 3.3:-86359680 | MS.gene42681:CDS |
| GGTTTATTATTCGGTGAACG+TGG | 0.564860 | 3.3:+86360360 | None:intergenic |
| CTTCCTTAATCAAGAACCTA+CGG | 0.566575 | 3.3:+86358991 | None:intergenic |
| GTTTCTGCCTGTGCCAGTAG+GGG | 0.569425 | 3.3:+86358951 | None:intergenic |
| GTTTGTGTTTGTGTGCATCA+CGG | 0.570532 | 3.3:-86360169 | MS.gene42681:CDS |
| GCGTAAGAGACTAACGACTA+AGG | 0.572543 | 3.3:-86360205 | MS.gene42681:CDS |
| AAAATCTTTAGCAGCTTGGG+TGG | 0.582100 | 3.3:-86358913 | MS.gene42681:intron |
| TGCATAGGGTTGTGAATGGA+TGG | 0.590999 | 3.3:-86360783 | None:intergenic |
| GAAGAAAACAGAAGTGGTGG+TGG | 0.592280 | 3.3:-86360718 | MS.gene42681:CDS |
| AATAAATTAGGTATTTGGAG+AGG | 0.593844 | 3.3:-86358094 | MS.gene42681:intron |
| GCGGAGAAGTGAATTAGTGA+TGG | 0.596207 | 3.3:-86357946 | MS.gene42681:CDS |
| CAAGTACTAGCTGCGATGAG+AGG | 0.600062 | 3.3:+86358633 | None:intergenic |
| TTCACTGCCAAACTGAAACT+AGG | 0.601450 | 3.3:+86358053 | None:intergenic |
| GTGGTGGCAATTTCAAATGT+GGG | 0.602248 | 3.3:-86360702 | MS.gene42681:CDS |
| GGACCTGGAGATGCCATCAA+AGG | 0.602592 | 3.3:+86360285 | None:intergenic |
| GATCAAAGAAAGATTTGACA+TGG | 0.605754 | 3.3:+86359749 | None:intergenic |
| ATATTCTTACTTGCAGCTAG+GGG | 0.610117 | 3.3:+86359354 | None:intergenic |
| ATGGAAGAGGCTGAGAAAGT+CGG | 0.617688 | 3.3:-86359667 | MS.gene42681:CDS |
| CATGATCATGATCTTGGCCA+TGG | 0.624053 | 3.3:+86360664 | None:intergenic |
| GGTGGTGGCAATTTCAAATG+TGG | 0.624592 | 3.3:-86360703 | MS.gene42681:CDS |
| GTGGCAATTTCAAATGTGGG+TGG | 0.626198 | 3.3:-86360699 | MS.gene42681:CDS |
| AATGAACTTTCAAGAATTTG+GGG | 0.631242 | 3.3:-86357979 | MS.gene42681:CDS |
| AGGTGGTGAAGTGAGCATGA+TGG | 0.635799 | 3.3:-86360742 | MS.gene42681:CDS |
| GGGGAAGCACAGTTTAAAGG+TGG | 0.637546 | 3.3:+86360597 | None:intergenic |
| TACTGGCACAGGCAGAAACA+GGG | 0.640432 | 3.3:-86358947 | MS.gene42681:CDS |
| CGTTCACCGAATAATAAACC+CGG | 0.641887 | 3.3:-86360357 | MS.gene42681:CDS |
| GCCAGTAGGGGAAATACCAA+AGG | 0.642812 | 3.3:+86358963 | None:intergenic |
| AGATACTACCTTATTCCGCA+AGG | 0.644323 | 3.3:-86357891 | MS.gene42681:CDS |
| AGGTGTTCATCTCAGACACA+TGG | 0.650077 | 3.3:-86357871 | MS.gene42681:CDS |
| AGGGACGAACCTTATTTCAG+GGG | 0.654773 | 3.3:+86360578 | None:intergenic |
| AGTTACAGGAGTCCTAGTAG+TGG | 0.671864 | 3.3:-86358714 | MS.gene42681:CDS |
| AATAATAATAAGCATCAAGG+TGG | 0.672497 | 3.3:-86360759 | MS.gene42681:CDS |
| TCGACGAGGATGAACTCCGT+AGG | 0.674026 | 3.3:-86359007 | MS.gene42681:CDS |
| GATGGAGAAGAAAACAGAAG+TGG | 0.675509 | 3.3:-86360724 | MS.gene42681:CDS |
| CTTAAGCGACACTAAAACAG+CGG | 0.676974 | 3.3:-86358756 | MS.gene42681:CDS |
| TAGTGGTGACCATAGTAGTG+TGG | 0.677764 | 3.3:-86358697 | MS.gene42681:CDS |
| GGAGAAGAAAACAGAAGTGG+TGG | 0.683682 | 3.3:-86360721 | MS.gene42681:CDS |
| GAAGAGGCTGAGAAAGTCGG+CGG | 0.686077 | 3.3:-86359664 | MS.gene42681:CDS |
| AATTTGGGGAGAAGACCAAG+CGG | 0.720680 | 3.3:-86357965 | MS.gene42681:CDS |
| TGTCTGAGATGAACACCTTG+CGG | 0.733097 | 3.3:+86357876 | None:intergenic |
| TATGAATAGGGACATCGACG+AGG | 0.735291 | 3.3:-86359021 | MS.gene42681:intron |
| TAGATGCAGTGATGAACTCG+AGG | 0.741103 | 3.3:-86359507 | MS.gene42681:CDS |
| GGTGGAGATAGCCATCACCA+TGG | 0.745710 | 3.3:-86360681 | MS.gene42681:CDS |
| GGTGACTTTGTAGAGTAACG+AGG | 0.754563 | 3.3:+86360618 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTATTCTTTTAATAAATT+AGG | - | chr3.3:86360507-86360526 | MS.gene42681:CDS | 10.0% |
| !!! | TAACATTTCAAATATTTTTT+GGG | - | chr3.3:86360470-86360489 | MS.gene42681:CDS | 10.0% |
| !! | AAATGTAAATAAGATTAAGA+TGG | - | chr3.3:86360592-86360611 | MS.gene42681:CDS | 15.0% |
| !! | AATGTAAATAAGATTAAGAT+GGG | - | chr3.3:86360593-86360612 | MS.gene42681:CDS | 15.0% |
| !!! | CTAACATTTCAAATATTTTT+TGG | - | chr3.3:86360469-86360488 | MS.gene42681:CDS | 15.0% |
| !!! | CTTTTAATAAATTAGGTATT+TGG | - | chr3.3:86360514-86360533 | MS.gene42681:CDS | 15.0% |
| !! | AAGAAAGTTGAATTTAGTAA+AGG | - | chr3.3:86358382-86358401 | MS.gene42681:CDS | 20.0% |
| !! | CTTGAAACTTAATAATGAAA+AGG | - | chr3.3:86360224-86360243 | MS.gene42681:CDS | 20.0% |
| !! | TAAACAACTTAATTAAGTGT+TGG | + | chr3.3:86359495-86359514 | None:intergenic | 20.0% |
| !!! | ATAATTTTGAAGGCATTAAT+AGG | + | chr3.3:86360159-86360178 | None:intergenic | 20.0% |
| ! | AAAGAAAGAGGTTATTGATA+TGG | - | chr3.3:86359026-86359045 | MS.gene42681:intron | 25.0% |
| ! | AAGTAACATTCTCTTCTAAA+AGG | + | chr3.3:86358189-86358208 | None:intergenic | 25.0% |
| ! | AATAAATTAGGTATTTGGAG+AGG | - | chr3.3:86360519-86360538 | MS.gene42681:CDS | 25.0% |
| ! | AATAATAATAAGCATCAAGG+TGG | - | chr3.3:86357854-86357873 | MS.gene42681:CDS | 25.0% |
| ! | AATGAACTTTCAAGAATTTG+GGG | - | chr3.3:86360634-86360653 | MS.gene42681:CDS | 25.0% |
| ! | ACAATGAACTTTCAAGAATT+TGG | - | chr3.3:86360632-86360651 | MS.gene42681:CDS | 25.0% |
| ! | AGAGAAGAGTAAATACAATT+AGG | + | chr3.3:86359529-86359548 | None:intergenic | 25.0% |
| ! | AGCTAATTGTATAAGTAATC+TGG | - | chr3.3:86360392-86360411 | MS.gene42681:CDS | 25.0% |
| ! | CAATGAACTTTCAAGAATTT+GGG | - | chr3.3:86360633-86360652 | MS.gene42681:CDS | 25.0% |
| ! | CACTGAATGAAAAAATAAAG+AGG | - | chr3.3:86360367-86360386 | MS.gene42681:CDS | 25.0% |
| ! | GGTAATAATAATAAGCATCA+AGG | - | chr3.3:86357851-86357870 | MS.gene42681:CDS | 25.0% |
| ! | TAAAGAAATTACCAATGAGA+TGG | - | chr3.3:86359191-86359210 | MS.gene42681:intron | 25.0% |
| ! | TATACACTTCTCTTTGTTAA+GGG | - | chr3.3:86359460-86359479 | MS.gene42681:CDS | 25.0% |
| ! | TTATACACTTCTCTTTGTTA+AGG | - | chr3.3:86359459-86359478 | MS.gene42681:CDS | 25.0% |
| ! | TTCTTGTATATGATTTCATC+AGG | + | chr3.3:86358367-86358386 | None:intergenic | 25.0% |
| !! | ATCTTACAAGAGTTTTTCTT+GGG | + | chr3.3:86358108-86358127 | None:intergenic | 25.0% |
| !! | GAACTTTTTGTTGAAGAAAA+AGG | - | chr3.3:86358621-86358640 | MS.gene42681:CDS | 25.0% |
| AAAATGCTCCCATTATGAAT+AGG | - | chr3.3:86359579-86359598 | MS.gene42681:CDS | 30.0% | |
| AAATGCTCCCATTATGAATA+GGG | - | chr3.3:86359580-86359599 | MS.gene42681:CDS | 30.0% | |
| AACAGTTCTATAAACTGTTC+CGG | + | chr3.3:86358278-86358297 | None:intergenic | 30.0% | |
| AACATTCCTGAAAACGTAAT+AGG | + | chr3.3:86359232-86359251 | None:intergenic | 30.0% | |
| ACAAAAATGTTCCAATGAGA+AGG | + | chr3.3:86358801-86358820 | None:intergenic | 30.0% | |
| ACTGGAAAATACAGAGATTA+TGG | + | chr3.3:86359800-86359819 | None:intergenic | 30.0% | |
| ATATATTCTTACTTGCAGCT+AGG | + | chr3.3:86359264-86359283 | None:intergenic | 30.0% | |
| ATCTAGAGAATTAGAGATTG+TGG | + | chr3.3:86359136-86359155 | None:intergenic | 30.0% | |
| ATTACTTGTAGAGTTGTTGA+TGG | - | chr3.3:86359291-86359310 | MS.gene42681:intron | 30.0% | |
| CAAAAATGTTCCAATGAGAA+GGG | + | chr3.3:86358800-86358819 | None:intergenic | 30.0% | |
| CAAAATTATCTTGCAGCTAT+TGG | - | chr3.3:86360170-86360189 | MS.gene42681:CDS | 30.0% | |
| CAATTAAACAAGCTAGTTAC+AGG | - | chr3.3:86359885-86359904 | MS.gene42681:CDS | 30.0% | |
| CACTTAAGATAACTTGAATC+AGG | + | chr3.3:86360770-86360789 | None:intergenic | 30.0% | |
| CTAAAAGGATTCCATCAATA+GGG | + | chr3.3:86358174-86358193 | None:intergenic | 30.0% | |
| CTTCTGTAATAATTGCTGAT+CGG | + | chr3.3:86360282-86360301 | None:intergenic | 30.0% | |
| GATCAAAGAAAGATTTGACA+TGG | + | chr3.3:86358867-86358886 | None:intergenic | 30.0% | |
| TAACAGTTGAGGAACTAAAA+AGG | - | chr3.3:86358485-86358504 | MS.gene42681:intron | 30.0% | |
| TAAGCATTTGCAAGATTGTA+TGG | - | chr3.3:86359361-86359380 | MS.gene42681:intron | 30.0% | |
| TATATTCTTACTTGCAGCTA+GGG | + | chr3.3:86359263-86359282 | None:intergenic | 30.0% | |
| TATTACAGAAGCCCTAATAT+GGG | - | chr3.3:86360291-86360310 | MS.gene42681:CDS | 30.0% | |
| TCTAAAAGGATTCCATCAAT+AGG | + | chr3.3:86358175-86358194 | None:intergenic | 30.0% | |
| TGTACTCCTGAAACTAAAAT+GGG | + | chr3.3:86358989-86359008 | None:intergenic | 30.0% | |
| TGTTCACCAAATCTTGATTT+GGG | + | chr3.3:86358145-86358164 | None:intergenic | 30.0% | |
| TTACAGATTGAGATTCTGTT+TGG | - | chr3.3:86359773-86359792 | MS.gene42681:CDS | 30.0% | |
| TTATTACAGAAGCCCTAATA+TGG | - | chr3.3:86360290-86360309 | MS.gene42681:CDS | 30.0% | |
| TTGTACTCCTGAAACTAAAA+TGG | + | chr3.3:86358990-86359009 | None:intergenic | 30.0% | |
| TTGTTCACCAAATCTTGATT+TGG | + | chr3.3:86358146-86358165 | None:intergenic | 30.0% | |
| ! | GACATTGTTGCTAAAGATTT+TGG | - | chr3.3:86358831-86358850 | MS.gene42681:intron | 30.0% |
| ! | GATCTTACAAGAGTTTTTCT+TGG | + | chr3.3:86358109-86358128 | None:intergenic | 30.0% |
| ! | TAGCTGCAAGATAATTTTGA+AGG | + | chr3.3:86360169-86360188 | None:intergenic | 30.0% |
| ! | TCTCATTGGAACATTTTTGT+GGG | - | chr3.3:86358801-86358820 | MS.gene42681:intron | 30.0% |
| ! | TCTTACAAGAGTTTTTCTTG+GGG | + | chr3.3:86358107-86358126 | None:intergenic | 30.0% |
| ! | TTCTCATTGGAACATTTTTG+TGG | - | chr3.3:86358800-86358819 | MS.gene42681:intron | 30.0% |
| ! | TTTGAAATGTTAGCCGAATA+TGG | + | chr3.3:86360462-86360481 | None:intergenic | 30.0% |
| !! | ATAATTGCTGATCGGTTTTA+TGG | + | chr3.3:86360274-86360293 | None:intergenic | 30.0% |
| !! | TTCATGGACTATGAAGATTT+TGG | - | chr3.3:86359083-86359102 | MS.gene42681:intron | 30.0% |
| AACTAAAAAGGACGGAGATT+TGG | - | chr3.3:86358497-86358516 | MS.gene42681:intron | 35.0% | |
| ACAGTTCTATAAACTGTTCC+GGG | + | chr3.3:86358277-86358296 | None:intergenic | 35.0% | |
| ACTGTTCCGGGTTTATTATT+CGG | + | chr3.3:86358265-86358284 | None:intergenic | 35.0% | |
| AGCAAGAGAAAGTTTCTTCA+TGG | - | chr3.3:86359067-86359086 | MS.gene42681:intron | 35.0% | |
| AGTTGAGGAACTAAAAAGGA+CGG | - | chr3.3:86358489-86358508 | MS.gene42681:intron | 35.0% | |
| ATATTCTTACTTGCAGCTAG+GGG | + | chr3.3:86359262-86359281 | None:intergenic | 35.0% | |
| CAGAAAATCTTTAGCAGCTT+GGG | - | chr3.3:86359697-86359716 | MS.gene42681:CDS | 35.0% | |
| CATTACAAACACGAAGATGA+TGG | + | chr3.3:86360048-86360067 | None:intergenic | 35.0% | |
| CTTCCTTAATCAAGAACCTA+CGG | + | chr3.3:86359625-86359644 | None:intergenic | 35.0% | |
| GATTAAGGAAGAAGTTCCTT+TGG | - | chr3.3:86359634-86359653 | MS.gene42681:CDS | 35.0% | |
| GTAATGCATCCATTTGATGT+TGG | - | chr3.3:86360062-86360081 | MS.gene42681:CDS | 35.0% | |
| GTTCTTGATATACCTTCAAC+TGG | + | chr3.3:86359818-86359837 | None:intergenic | 35.0% | |
| TAAAGGTAGCACAAAGAAAG+AGG | - | chr3.3:86359014-86359033 | MS.gene42681:CDS | 35.0% | |
| TCAACTCATGATCATGATCT+TGG | + | chr3.3:86357958-86357977 | None:intergenic | 35.0% | |
| TCGATGTCCCTATTCATAAT+GGG | + | chr3.3:86359590-86359609 | None:intergenic | 35.0% | |
| TCTAAGCCCAAATCAAGATT+TGG | - | chr3.3:86358136-86358155 | MS.gene42681:intron | 35.0% | |
| TTTCTTTGTGCTACCTTTAC+TGG | + | chr3.3:86359013-86359032 | None:intergenic | 35.0% | |
| ! | AATGTATCCAGGTTTTCACT+TGG | - | chr3.3:86358671-86358690 | MS.gene42681:CDS | 35.0% |
| ! | AGATTTTGGATGGTGTAACA+TGG | - | chr3.3:86358764-86358783 | MS.gene42681:CDS | 35.0% |
| ! | CTTACTTGTGTTGATCTACT+AGG | - | chr3.3:86359337-86359356 | MS.gene42681:intron | 35.0% |
| ! | GTAAGGTTTTCATTTGTAGC+AGG | + | chr3.3:86358085-86358104 | None:intergenic | 35.0% |
| ! | TAAATTGGCCACGAAGATTT+TGG | - | chr3.3:86358750-86358769 | MS.gene42681:CDS | 35.0% |
| ! | TCTCTGTATTTTCCAGTTGA+AGG | - | chr3.3:86359803-86359822 | MS.gene42681:CDS | 35.0% |
| !! | AGAGTTGTTGATGGTTGTAA+GGG | - | chr3.3:86359300-86359319 | MS.gene42681:intron | 35.0% |
| !! | ATGTTTTATAGATGGTGTCG+AGG | - | chr3.3:86360091-86360110 | MS.gene42681:CDS | 35.0% |
| !! | TAGAGTTGTTGATGGTTGTA+AGG | - | chr3.3:86359299-86359318 | MS.gene42681:intron | 35.0% |
| !!! | AAGGTGCTTTATTTTGTCCA+TGG | - | chr3.3:86358640-86358659 | MS.gene42681:CDS | 35.0% |
| AAAATCTTTAGCAGCTTGGG+TGG | - | chr3.3:86359700-86359719 | MS.gene42681:CDS | 40.0% | |
| AAACTAGGATGCCAGTATTG+TGG | + | chr3.3:86360548-86360567 | None:intergenic | 40.0% | |
| ACTCCGTAGGTTCTTGATTA+AGG | - | chr3.3:86359619-86359638 | MS.gene42681:CDS | 40.0% | |
| AGATACTACCTTATTCCGCA+AGG | - | chr3.3:86360722-86360741 | MS.gene42681:CDS | 40.0% | |
| AGGATTCCATCAATAGGGTA+AGG | + | chr3.3:86358169-86358188 | None:intergenic | 40.0% | |
| AGTAGTGTGGCTTCTTCTAA+TGG | - | chr3.3:86359929-86359948 | MS.gene42681:CDS | 40.0% | |
| CCAGAAAATCTTTAGCAGCT+TGG | - | chr3.3:86359696-86359715 | MS.gene42681:CDS | 40.0% | |
| CGTTCACCGAATAATAAACC+CGG | - | chr3.3:86358256-86358275 | MS.gene42681:CDS | 40.0% | |
| CTACACTGTCACCCATATTA+GGG | + | chr3.3:86360305-86360324 | None:intergenic | 40.0% | |
| CTTAAGCGACACTAAAACAG+CGG | - | chr3.3:86359857-86359876 | MS.gene42681:CDS | 40.0% | |
| GAACAACCTTACCCTATTGA+TGG | - | chr3.3:86358160-86358179 | MS.gene42681:intron | 40.0% | |
| GAGTCTGCAGAACATATTGA+TGG | + | chr3.3:86358909-86358928 | None:intergenic | 40.0% | |
| GATGGAGAAGAAAACAGAAG+TGG | - | chr3.3:86357889-86357908 | MS.gene42681:CDS | 40.0% | |
| GGATACATTTCTTCAGTCCA+TGG | + | chr3.3:86358660-86358679 | None:intergenic | 40.0% | |
| GTCGATGTCCCTATTCATAA+TGG | + | chr3.3:86359591-86359610 | None:intergenic | 40.0% | |
| GTGGCATGTTAGTTACCAAA+TGG | - | chr3.3:86358566-86358585 | MS.gene42681:CDS | 40.0% | |
| GTGGTGGCAATTTCAAATGT+GGG | - | chr3.3:86357911-86357930 | MS.gene42681:CDS | 40.0% | |
| GTTTGTGTTTGTGTGCATCA+CGG | - | chr3.3:86358444-86358463 | MS.gene42681:intron | 40.0% | |
| TACACCATCCAAAATCTTCG+TGG | + | chr3.3:86358761-86358780 | None:intergenic | 40.0% | |
| TAGAAGAAGCCACACTACTA+TGG | + | chr3.3:86359928-86359947 | None:intergenic | 40.0% | |
| TAGTTTCAGTTTGGCAGTGA+AGG | - | chr3.3:86360562-86360581 | MS.gene42681:CDS | 40.0% | |
| TCTACACTGTCACCCATATT+AGG | + | chr3.3:86360306-86360325 | None:intergenic | 40.0% | |
| TGGACTGAAGAAATGTATCC+AGG | - | chr3.3:86358660-86358679 | MS.gene42681:CDS | 40.0% | |
| TGGAGTCGAACGATCTAAAT+TGG | - | chr3.3:86358735-86358754 | MS.gene42681:CDS | 40.0% | |
| TTCACTGCCAAACTGAAACT+AGG | + | chr3.3:86360563-86360582 | None:intergenic | 40.0% | |
| TTTATGGCTAGGACAGAGTT+TGG | + | chr3.3:86360258-86360277 | None:intergenic | 40.0% | |
| TTTGTGTTTGTGTGCATCAC+GGG | - | chr3.3:86358445-86358464 | MS.gene42681:intron | 40.0% | |
| ! | ACTCTTGTTTCCCTTCTCAT+TGG | - | chr3.3:86358787-86358806 | MS.gene42681:CDS | 40.0% |
| ! | ATTTGTAGCAGGAGCTTTTG+GGG | + | chr3.3:86358074-86358093 | None:intergenic | 40.0% |
| ! | CAAGAGTTTTTCTTGGGGTA+AGG | + | chr3.3:86358102-86358121 | None:intergenic | 40.0% |
| ! | CATTTGTAGCAGGAGCTTTT+GGG | + | chr3.3:86358075-86358094 | None:intergenic | 40.0% |
| ! | CCAAGCTGCTAAAGATTTTC+TGG | + | chr3.3:86359699-86359718 | None:intergenic | 40.0% |
| ! | GGCGATCGATGTTTTATAGA+TGG | - | chr3.3:86360083-86360102 | MS.gene42681:CDS | 40.0% |
| ! | GGTTTATTATTCGGTGAACG+TGG | + | chr3.3:86358256-86358275 | None:intergenic | 40.0% |
| ! | TAGGGACGAACCTTATTTCA+GGG | + | chr3.3:86358039-86358058 | None:intergenic | 40.0% |
| ! | TCATTTGTAGCAGGAGCTTT+TGG | + | chr3.3:86358076-86358095 | None:intergenic | 40.0% |
| ! | TGGGTGCTTTTAATCAATCG+TGG | - | chr3.3:86358715-86358734 | MS.gene42681:CDS | 40.0% |
| ! | TTCAGGAGTACAACCAGTAA+AGG | - | chr3.3:86358997-86359016 | MS.gene42681:CDS | 40.0% |
| !! | CTTGTGATGGTGACATTTTG+TGG | - | chr3.3:86358547-86358566 | MS.gene42681:CDS | 40.0% |
| !! | GAGCTTTTGGGGGTTTATTT+GGG | + | chr3.3:86358063-86358082 | None:intergenic | 40.0% |
| !! | GTACTTGCTGCTTTCATGTT+TGG | - | chr3.3:86359996-86360015 | MS.gene42681:CDS | 40.0% |
| !! | GTTGGCTAGTTTAACAGTTG+AGG | - | chr3.3:86358474-86358493 | MS.gene42681:intron | 40.0% |
| !!! | GCACTTCCCATTTTAGTTTC+AGG | - | chr3.3:86358980-86358999 | MS.gene42681:CDS | 40.0% |
| AAGCGATCCAAGTGAAAACC+TGG | + | chr3.3:86358681-86358700 | None:intergenic | 45.0% | |
| AATTTGGGGAGAAGACCAAG+CGG | - | chr3.3:86360648-86360667 | MS.gene42681:CDS | 45.0% | |
| ACGACGTCAGCAGAGAAAAT+CGG | - | chr3.3:86360342-86360361 | MS.gene42681:CDS | 45.0% | |
| ACTCGACTGTTGGCCATATT+CGG | - | chr3.3:86360446-86360465 | MS.gene42681:CDS | 45.0% | |
| ACTGTGCTTCCCCTGAAATA+AGG | - | chr3.3:86358026-86358045 | MS.gene42681:CDS | 45.0% | |
| AGCAGTTGCTTCCATCTCAT+TGG | + | chr3.3:86359205-86359224 | None:intergenic | 45.0% | |
| AGGTGTTCATCTCAGACACA+TGG | - | chr3.3:86360742-86360761 | MS.gene42681:CDS | 45.0% | |
| AGTTACAGGAGTCCTAGTAG+TGG | - | chr3.3:86359899-86359918 | MS.gene42681:CDS | 45.0% | |
| ATATGGCCAACAGTCGAGTT+AGG | + | chr3.3:86360445-86360464 | None:intergenic | 45.0% | |
| ATGGAAGAGGCTGAGAAAGT+CGG | - | chr3.3:86358946-86358965 | MS.gene42681:CDS | 45.0% | |
| ATGTTCTGCAGACTCTCTCT+GGG | - | chr3.3:86358914-86358933 | MS.gene42681:CDS | 45.0% | |
| CACTAATTCACTTCTCCGCT+TGG | + | chr3.3:86360666-86360685 | None:intergenic | 45.0% | |
| CACTCCTAGAACACCTTTGA+TGG | - | chr3.3:86358315-86358334 | MS.gene42681:CDS | 45.0% | |
| CATCGATCGCCAACATCAAA+TGG | + | chr3.3:86360074-86360093 | None:intergenic | 45.0% | |
| CATGATCATGATCTTGGCCA+TGG | + | chr3.3:86357952-86357971 | None:intergenic | 45.0% | |
| CTACTATGGTCACCACTACT+AGG | + | chr3.3:86359914-86359933 | None:intergenic | 45.0% | |
| CTGGCATCCTAGTTTCAGTT+TGG | - | chr3.3:86360553-86360572 | MS.gene42681:CDS | 45.0% | |
| GAAGAAAACAGAAGTGGTGG+TGG | - | chr3.3:86357895-86357914 | MS.gene42681:CDS | 45.0% | |
| GACAATGTGCGTGAACCATT+TGG | + | chr3.3:86358584-86358603 | None:intergenic | 45.0% | |
| GATGAACACCTTGCGGAATA+AGG | + | chr3.3:86360733-86360752 | None:intergenic | 45.0% | |
| GCGGAGAAGTGAATTAGTGA+TGG | - | chr3.3:86360667-86360686 | MS.gene42681:CDS | 45.0% | |
| GCGTAAGAGACTAACGACTA+AGG | - | chr3.3:86358408-86358427 | MS.gene42681:CDS | 45.0% | |
| GGAGAAGAAAACAGAAGTGG+TGG | - | chr3.3:86357892-86357911 | MS.gene42681:CDS | 45.0% | |
| GGTGAACGTGGTGCTTTATA+TGG | + | chr3.3:86358244-86358263 | None:intergenic | 45.0% | |
| GGTGACTTTGTAGAGTAACG+AGG | + | chr3.3:86357998-86358017 | None:intergenic | 45.0% | |
| GTGGCAATTTCAAATGTGGG+TGG | - | chr3.3:86357914-86357933 | MS.gene42681:CDS | 45.0% | |
| TAGATGCAGTGATGAACTCG+AGG | - | chr3.3:86359106-86359125 | MS.gene42681:intron | 45.0% | |
| TAGTGGTGACCATAGTAGTG+TGG | - | chr3.3:86359916-86359935 | MS.gene42681:CDS | 45.0% | |
| TATGAATAGGGACATCGACG+AGG | - | chr3.3:86359592-86359611 | MS.gene42681:CDS | 45.0% | |
| TATGGCCAACAGTCGAGTTA+GGG | + | chr3.3:86360444-86360463 | None:intergenic | 45.0% | |
| TATGTTCTGCAGACTCTCTC+TGG | - | chr3.3:86358913-86358932 | MS.gene42681:intron | 45.0% | |
| TCCTTTGGTATTTCCCCTAC+TGG | - | chr3.3:86359649-86359668 | MS.gene42681:CDS | 45.0% | |
| TGGAGAGGAATCCACAATAC+TGG | - | chr3.3:86360534-86360553 | MS.gene42681:CDS | 45.0% | |
| TTCTCAGCCTCTTCCATTAG+TGG | + | chr3.3:86358943-86358962 | None:intergenic | 45.0% | |
| TTGGGGGTTTATTTGGGCTA+GGG | + | chr3.3:86358057-86358076 | None:intergenic | 45.0% | |
| TTTGGGGGTTTATTTGGGCT+AGG | + | chr3.3:86358058-86358077 | None:intergenic | 45.0% | |
| ! | AAGGACGGAGATTTGGAGTT+TGG | - | chr3.3:86358504-86358523 | MS.gene42681:intron | 45.0% |
| ! | AGATTTGGAGTTTGGGGCTT+TGG | - | chr3.3:86358512-86358531 | MS.gene42681:intron | 45.0% |
| ! | AGGACGGAGATTTGGAGTTT+GGG | - | chr3.3:86358505-86358524 | MS.gene42681:intron | 45.0% |
| ! | AGGGACGAACCTTATTTCAG+GGG | + | chr3.3:86358038-86358057 | None:intergenic | 45.0% |
| ! | CTAGGGACGAACCTTATTTC+AGG | + | chr3.3:86358040-86358059 | None:intergenic | 45.0% |
| ! | CTGCTGCCTATTACGTTTTC+AGG | - | chr3.3:86359223-86359242 | MS.gene42681:intron | 45.0% |
| ! | GATGGTTGTAAGGGCATGTT+TGG | - | chr3.3:86359309-86359328 | MS.gene42681:intron | 45.0% |
| ! | GGTGGTGGCAATTTCAAATG+TGG | - | chr3.3:86357910-86357929 | MS.gene42681:CDS | 45.0% |
| ! | GGTTTTCACTTGGATCGCTT+TGG | - | chr3.3:86358681-86358700 | MS.gene42681:CDS | 45.0% |
| ! | TCAGGGGAAGCACAGTTTAA+AGG | + | chr3.3:86358022-86358041 | None:intergenic | 45.0% |
| ! | TGTCTGAGATGAACACCTTG+CGG | + | chr3.3:86360740-86360759 | None:intergenic | 45.0% |
| ! | TTGGCCACGAAGATTTTGGA+TGG | - | chr3.3:86358754-86358773 | MS.gene42681:CDS | 45.0% |
| ! | TTTGTAGCAGGAGCTTTTGG+GGG | + | chr3.3:86358073-86358092 | None:intergenic | 45.0% |
| !! | CGCTTTGGTTCTACTCACAT+GGG | - | chr3.3:86358696-86358715 | MS.gene42681:CDS | 45.0% |
| !! | GATGCCATCAAAGGTGTTCT+AGG | + | chr3.3:86358322-86358341 | None:intergenic | 45.0% |
| !! | GGAGCTTTTGGGGGTTTATT+TGG | + | chr3.3:86358064-86358083 | None:intergenic | 45.0% |
| !! | TCGCTTTGGTTCTACTCACA+TGG | - | chr3.3:86358695-86358714 | MS.gene42681:CDS | 45.0% |
| !! | TGCTGATCGGTTTTATGGCT+AGG | + | chr3.3:86360269-86360288 | None:intergenic | 45.0% |
| !!! | CGCTGTTTTAGTGTCGCTTA+AGG | + | chr3.3:86359859-86359878 | None:intergenic | 45.0% |
| AGGTGGTGAAGTGAGCATGA+TGG | - | chr3.3:86357871-86357890 | MS.gene42681:CDS | 50.0% | |
| ATGGCCAACAGTCGAGTTAG+GGG | + | chr3.3:86360443-86360462 | None:intergenic | 50.0% | |
| CAAGTACTAGCTGCGATGAG+AGG | + | chr3.3:86359983-86360002 | None:intergenic | 50.0% | |
| CATGATCTTGGCCATGGTGA+TGG | + | chr3.3:86357946-86357965 | None:intergenic | 50.0% | |
| CTTTAGCAGCTTGGGTGGTA+AGG | - | chr3.3:86359705-86359724 | MS.gene42681:CDS | 50.0% | |
| GAGGTGGTGTATGCTTGTGA+TGG | - | chr3.3:86358534-86358553 | MS.gene42681:CDS | 50.0% | |
| GCCAGTAGGGGAAATACCAA+AGG | + | chr3.3:86359653-86359672 | None:intergenic | 50.0% | |
| TACTGGCACAGGCAGAAACA+GGG | - | chr3.3:86359666-86359685 | MS.gene42681:CDS | 50.0% | |
| TCAGCCTCTTCCATTAGTGG+AGG | + | chr3.3:86358940-86358959 | None:intergenic | 50.0% | |
| ! | ACACCTTTGATGGCATCTCC+AGG | - | chr3.3:86358325-86358344 | MS.gene42681:CDS | 50.0% |
| ! | GGACGGAGATTTGGAGTTTG+GGG | - | chr3.3:86358506-86358525 | MS.gene42681:intron | 50.0% |
| ! | GGGGAAGCACAGTTTAAAGG+TGG | + | chr3.3:86358019-86358038 | None:intergenic | 50.0% |
| ! | TGTTTCTGCCTGTGCCAGTA+GGG | + | chr3.3:86359666-86359685 | None:intergenic | 50.0% |
| ! | TTTGGAGTTTGGGGCTTTGG+AGG | - | chr3.3:86358515-86358534 | MS.gene42681:intron | 50.0% |
| CTACTGGCACAGGCAGAAAC+AGG | - | chr3.3:86359665-86359684 | MS.gene42681:CDS | 55.0% | |
| CTCACCCCTAACTCGACTGT+TGG | - | chr3.3:86360436-86360455 | MS.gene42681:CDS | 55.0% | |
| GAAGAGGCTGAGAAAGTCGG+CGG | - | chr3.3:86358949-86358968 | MS.gene42681:CDS | 55.0% | |
| GGACCTGGAGATGCCATCAA+AGG | + | chr3.3:86358331-86358350 | None:intergenic | 55.0% | |
| GGTATTTCCCCTACTGGCAC+AGG | - | chr3.3:86359655-86359674 | MS.gene42681:CDS | 55.0% | |
| GGTGGAGATAGCCATCACCA+TGG | - | chr3.3:86357932-86357951 | MS.gene42681:CDS | 55.0% | |
| GTTTCTGCCTGTGCCAGTAG+GGG | + | chr3.3:86359665-86359684 | None:intergenic | 55.0% | |
| TCATCAGGATCCTCACCAGC+TGG | + | chr3.3:86358352-86358371 | None:intergenic | 55.0% | |
| TCGACGAGGATGAACTCCGT+AGG | - | chr3.3:86359606-86359625 | MS.gene42681:CDS | 55.0% | |
| TCTCTCTGGGCCTCCACTAA+TGG | - | chr3.3:86358927-86358946 | MS.gene42681:CDS | 55.0% | |
| TGGGCCTCCACTAATGGAAG+AGG | - | chr3.3:86358933-86358952 | MS.gene42681:CDS | 55.0% | |
| ! | GTGCATCACGGGTAGCTTGT+TGG | - | chr3.3:86358456-86358475 | MS.gene42681:intron | 55.0% |
| !! | CTGTTTCTGCCTGTGCCAGT+AGG | + | chr3.3:86359667-86359686 | None:intergenic | 55.0% |
| ATCTCCAGGTCCAGCTGGTG+AGG | - | chr3.3:86358339-86358358 | MS.gene42681:CDS | 60.0% | |
| ATGGCATCTCCAGGTCCAGC+TGG | - | chr3.3:86358334-86358353 | MS.gene42681:CDS | 60.0% | |
| !! | GGAGTTTGGGGCTTTGGAGG+TGG | - | chr3.3:86358518-86358537 | MS.gene42681:intron | 60.0% |
| GGATCCTCACCAGCTGGACC+TGG | + | chr3.3:86358346-86358365 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 86357845 | 86360790 | 86357845 | ID=MS.gene42681 |
| chr3.3 | mRNA | 86357845 | 86360790 | 86357845 | ID=MS.gene42681.t1;Parent=MS.gene42681 |
| chr3.3 | exon | 86359364 | 86360790 | 86359364 | ID=MS.gene42681.t1.exon1;Parent=MS.gene42681.t1 |
| chr3.3 | CDS | 86359364 | 86360790 | 86359364 | ID=cds.MS.gene42681.t1;Parent=MS.gene42681.t1 |
| chr3.3 | exon | 86358914 | 86359034 | 86358914 | ID=MS.gene42681.t1.exon2;Parent=MS.gene42681.t1 |
| chr3.3 | CDS | 86358914 | 86359034 | 86358914 | ID=cds.MS.gene42681.t1;Parent=MS.gene42681.t1 |
| chr3.3 | exon | 86358523 | 86358816 | 86358523 | ID=MS.gene42681.t1.exon3;Parent=MS.gene42681.t1 |
| chr3.3 | CDS | 86358523 | 86358816 | 86358523 | ID=cds.MS.gene42681.t1;Parent=MS.gene42681.t1 |
| chr3.3 | exon | 86358247 | 86358449 | 86358247 | ID=MS.gene42681.t1.exon4;Parent=MS.gene42681.t1 |
| chr3.3 | CDS | 86358247 | 86358449 | 86358247 | ID=cds.MS.gene42681.t1;Parent=MS.gene42681.t1 |
| chr3.3 | exon | 86357845 | 86358106 | 86357845 | ID=MS.gene42681.t1.exon5;Parent=MS.gene42681.t1 |
| chr3.3 | CDS | 86357845 | 86358106 | 86357845 | ID=cds.MS.gene42681.t1;Parent=MS.gene42681.t1 |
| Gene Sequence |
| Protein sequence |
