Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32770.t1 | XP_003603197.1 | 96.4 | 759 | 25 | 1 | 1 | 757 | 14 | 772 | 0.00E+00 | 1407.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32770.t1 | Q9LYG9 | 55.7 | 720 | 292 | 10 | 32 | 746 | 33 | 730 | 1.3e-206 | 721.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32770.t1 | G7J8E1 | 96.4 | 759 | 25 | 1 | 1 | 757 | 14 | 772 | 0.0e+00 | 1407.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene42681 | MS.gene32770 | PPI |
| MS.gene32770 | MS.gene42628 | PPI |
| MS.gene32770 | MS.gene42686 | PPI |
| MS.gene32770 | MS.gene42681 | PPI |
| MS.gene32770 | MS.gene42622 | PPI |
| MS.gene32770 | MS.gene014978 | PPI |
| MS.gene32770 | MS.gene32764 | PPI |
| MS.gene32770 | MS.gene42688 | PPI |
| MS.gene32770 | MS.gene74110 | PPI |
| MS.gene32770 | MS.gene014973 | PPI |
| MS.gene32770 | MS.gene32773 | PPI |
| MS.gene32770 | MS.gene97525 | PPI |
| MS.gene32770 | MS.gene42620 | PPI |
| MS.gene32770 | MS.gene062410 | PPI |
| MS.gene32770 | MS.gene014981 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32770.t1 | MTR_3g104940 | 96.970 | 759 | 21 | 1 | 1 | 757 | 14 | 772 | 0.0 | 1518 |
| MS.gene32770.t1 | MTR_3g104990 | 87.237 | 760 | 89 | 2 | 1 | 757 | 17 | 771 | 0.0 | 1333 |
| MS.gene32770.t1 | MTR_3g104920 | 79.501 | 761 | 128 | 4 | 1 | 757 | 1 | 737 | 0.0 | 1211 |
| MS.gene32770.t1 | MTR_3g104920 | 79.501 | 761 | 128 | 4 | 1 | 757 | 13 | 749 | 0.0 | 1211 |
| MS.gene32770.t1 | MTR_2g041220 | 49.804 | 765 | 327 | 15 | 5 | 746 | 15 | 745 | 0.0 | 692 |
| MS.gene32770.t1 | MTR_8g071250 | 46.114 | 579 | 283 | 11 | 184 | 749 | 129 | 691 | 1.48e-166 | 497 |
| MS.gene32770.t1 | MTR_1g113850 | 39.940 | 671 | 339 | 11 | 129 | 749 | 254 | 910 | 9.55e-156 | 476 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32770.t1 | AT5G12080 | 57.778 | 720 | 277 | 10 | 32 | 746 | 33 | 730 | 0.0 | 825 |
| MS.gene32770.t1 | AT5G12080 | 57.778 | 720 | 277 | 10 | 32 | 746 | 33 | 730 | 0.0 | 825 |
| MS.gene32770.t1 | AT5G12080 | 57.778 | 720 | 277 | 10 | 32 | 746 | 33 | 730 | 0.0 | 825 |
| MS.gene32770.t1 | AT5G19520 | 53.890 | 707 | 307 | 8 | 41 | 746 | 50 | 738 | 0.0 | 758 |
| MS.gene32770.t1 | AT5G19520 | 53.890 | 707 | 307 | 8 | 41 | 746 | 50 | 738 | 0.0 | 758 |
| MS.gene32770.t1 | AT2G17010 | 40.984 | 610 | 312 | 8 | 177 | 749 | 292 | 890 | 7.22e-155 | 474 |
| MS.gene32770.t1 | AT3G14810 | 40.368 | 706 | 343 | 12 | 98 | 754 | 188 | 864 | 4.30e-154 | 471 |
| MS.gene32770.t1 | AT1G53470 | 40.120 | 668 | 347 | 12 | 129 | 749 | 199 | 860 | 1.55e-153 | 469 |
| MS.gene32770.t1 | AT1G78610 | 41.311 | 656 | 331 | 9 | 132 | 749 | 193 | 832 | 3.03e-152 | 465 |
| MS.gene32770.t1 | AT2G17000 | 40.826 | 605 | 320 | 10 | 177 | 749 | 225 | 823 | 7.15e-142 | 438 |
| MS.gene32770.t1 | AT2G17000 | 40.826 | 605 | 320 | 10 | 177 | 749 | 225 | 823 | 8.88e-142 | 438 |
| MS.gene32770.t1 | AT3G14810 | 37.819 | 706 | 326 | 13 | 98 | 754 | 188 | 829 | 2.21e-134 | 418 |
| MS.gene32770.t1 | AT2G17010 | 35.246 | 366 | 189 | 8 | 177 | 505 | 292 | 646 | 3.69e-61 | 218 |
Find 152 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTACCTTGTCAACCATATT+TGG | 0.086878 | 3.1:-82881031 | None:intergenic |
| CAATATTGGCATCCTAATTT+TGG | 0.137793 | 3.1:+82881237 | MS.gene32770:CDS |
| GGACAGAGCTTTGGAGTTTA+AGG | 0.149958 | 3.1:+82879258 | MS.gene32770:CDS |
| GCATTTGCAGCAGGAGATTT+TGG | 0.152219 | 3.1:-82878807 | None:intergenic |
| CCAATCTGCTAAAGACTTTC+TGG | 0.165787 | 3.1:-82880432 | None:intergenic |
| TATCTGTTAGTTCACCTTAT+AGG | 0.222459 | 3.1:+82878964 | MS.gene32770:CDS |
| ACGACACCAGCAGAGAAAAT+TGG | 0.226737 | 3.1:+82881070 | MS.gene32770:CDS |
| AAGTAACATTCTCTTCAAAA+AGG | 0.237514 | 3.1:-82878920 | None:intergenic |
| CTCATGGACTATGAAGATTT+TGG | 0.238303 | 3.1:+82879835 | MS.gene32770:CDS |
| TCTCTCTGGGCCTCCACTTA+TGG | 0.256047 | 3.1:+82879679 | MS.gene32770:CDS |
| ACTCCGTCGTTTCATGATTA+AGG | 0.256189 | 3.1:+82880355 | MS.gene32770:CDS |
| ACAATGAACTTTCAAGAGTT+TGG | 0.262365 | 3.1:+82881321 | MS.gene32770:CDS |
| CTAGGGATGAACCTTATTTC+AGG | 0.265146 | 3.1:-82878771 | None:intergenic |
| TTGTTAAATGCGTTCCTATA+AGG | 0.266324 | 3.1:-82878978 | None:intergenic |
| CAAAATCTTTGCGGCCAGTT+TGG | 0.274734 | 3.1:-82879501 | None:intergenic |
| TCAGGGGAAGCACAGTTTAA+AGG | 0.276027 | 3.1:-82878753 | None:intergenic |
| TCCTTTGGTATTTCCCCTAT+TGG | 0.277648 | 3.1:+82880385 | MS.gene32770:CDS |
| TTGTTCACCAAATCTTGATT+TGG | 0.289978 | 3.1:-82878877 | None:intergenic |
| TCTCTTTCGCTTGCCTCTAC+TGG | 0.292785 | 3.1:-82879147 | None:intergenic |
| GTACTCGCGGCTTTCATGTT+TGG | 0.292967 | 3.1:+82880723 | MS.gene32770:CDS |
| GACGACGTTGCTAAAGGTTT+TGG | 0.297117 | 3.1:+82879583 | MS.gene32770:CDS |
| TTCAGGAGTACTACCGTTAA+TGG | 0.300594 | 3.1:+82879749 | MS.gene32770:CDS |
| TACTCGCGGCTTTCATGTTT+GGG | 0.302794 | 3.1:+82880724 | MS.gene32770:CDS |
| AGCTTTGGAGTTTAAGGCTT+TGG | 0.308174 | 3.1:+82879264 | MS.gene32770:CDS |
| ATGGCATCTCCAGGTCCTGC+TGG | 0.309195 | 3.1:+82879086 | MS.gene32770:CDS |
| TAGTACTCCTGAAACTAAAA+TGG | 0.314981 | 3.1:-82879739 | None:intergenic |
| TCTCCACTCACATTTGAAAT+AGG | 0.334324 | 3.1:-82878660 | None:intergenic |
| ACTGTGCTTCCCCTGAAATA+AGG | 0.336839 | 3.1:+82878760 | MS.gene32770:CDS |
| TGGAGAGGAATCCACAATAT+TGG | 0.337472 | 3.1:+82881223 | MS.gene32770:CDS |
| CGACACCAGCAGAGAAAATT+GGG | 0.337647 | 3.1:+82881071 | MS.gene32770:CDS |
| CACTCCTAGAACACCTTTGA+TGG | 0.340051 | 3.1:+82879067 | MS.gene32770:CDS |
| CTACCTTGTCAACCATATTT+GGG | 0.340360 | 3.1:-82881030 | None:intergenic |
| TTCACTACCAAGCCAAAATT+AGG | 0.347299 | 3.1:-82881249 | None:intergenic |
| ACTCTTGTTTCCCTTCTCAT+TGG | 0.349071 | 3.1:+82879539 | MS.gene32770:CDS |
| CTTCTGTAATAATTGCTGAT+AGG | 0.353608 | 3.1:-82881007 | None:intergenic |
| TTATTACAGAAGCCCAAATA+TGG | 0.356757 | 3.1:+82881018 | MS.gene32770:CDS |
| TGTTCACCAAATCTTGATTT+GGG | 0.359204 | 3.1:-82878876 | None:intergenic |
| ACCGTTCCAGACTTGTTATT+CGG | 0.360429 | 3.1:-82879014 | None:intergenic |
| AAAGAAAGACATTATTGATA+TGG | 0.362900 | 3.1:+82879778 | MS.gene32770:CDS |
| TGTCTCTGACTGTGCCAATA+GGG | 0.364319 | 3.1:-82880399 | None:intergenic |
| AACATTCCTGAAAATGTAAT+AGG | 0.365241 | 3.1:-82879981 | None:intergenic |
| TCTAAGCCCAAATCAAGATT+TGG | 0.370555 | 3.1:+82878870 | MS.gene32770:CDS |
| ATCTTGATGAAATCATTTAC+AGG | 0.371328 | 3.1:+82879114 | MS.gene32770:CDS |
| TTTCTTTGTGCCGCCATTAA+CGG | 0.374402 | 3.1:-82879762 | None:intergenic |
| CAGAAAGTCTTTAGCAGATT+GGG | 0.374694 | 3.1:+82880433 | MS.gene32770:CDS |
| CCAGAAAGTCTTTAGCAGAT+TGG | 0.385016 | 3.1:+82880432 | MS.gene32770:CDS |
| AGTAGTGTGGCTTCTTCTAA+TGG | 0.385108 | 3.1:+82880656 | MS.gene32770:CDS |
| GATGCCATCAAAGGTGTTCT+AGG | 0.387245 | 3.1:-82879071 | None:intergenic |
| TCAACTCATGATCATGATCT+TGG | 0.387525 | 3.1:-82878689 | None:intergenic |
| TATGTTCTACAGACTCTCTC+TGG | 0.390416 | 3.1:+82879665 | MS.gene32770:CDS |
| CTGTCTCTGACTGTGCCAAT+AGG | 0.392993 | 3.1:-82880400 | None:intergenic |
| AACTGAGAAGGACAGAGCTT+TGG | 0.400147 | 3.1:+82879249 | MS.gene32770:CDS |
| CACCAGTTCACTTCTCCGCT+TGG | 0.404807 | 3.1:-82881352 | None:intergenic |
| CTACTATGGTCACCACTACT+AGG | 0.414873 | 3.1:-82880638 | None:intergenic |
| TTAGTGGCGAGGACAGAGTT+TGG | 0.415287 | 3.1:-82880983 | None:intergenic |
| TGCGGCCAGTTTGGATCGAT+GGG | 0.415753 | 3.1:-82879492 | None:intergenic |
| ATCTCCAGGTCCTGCTGGGG+AGG | 0.420002 | 3.1:+82879091 | MS.gene32770:CDS |
| GATTAAGGAAGAAGTTCCTT+TGG | 0.428446 | 3.1:+82880370 | MS.gene32770:CDS |
| TTGCGGCCAGTTTGGATCGA+TGG | 0.433487 | 3.1:-82879493 | None:intergenic |
| CACCGATCGCCAACATCAAA+CGG | 0.435576 | 3.1:-82880798 | None:intergenic |
| GTGCATTGCGGGTAGCTTGT+TGG | 0.437117 | 3.1:+82879208 | MS.gene32770:CDS |
| TGGCATCTCCAGGTCCTGCT+GGG | 0.444037 | 3.1:+82879087 | MS.gene32770:CDS |
| AGGGTTTCATCAATAGGATA+AGG | 0.446597 | 3.1:-82878900 | None:intergenic |
| TCAGTTTGGTTCTCCTCACA+TGG | 0.448034 | 3.1:+82879447 | MS.gene32770:CDS |
| AAACTAAAATGGCCAATACT+TGG | 0.448771 | 3.1:-82879728 | None:intergenic |
| GGTTGACAAGGTAGAGTTCT+CGG | 0.449379 | 3.1:+82881039 | MS.gene32770:CDS |
| TATATCATTCAAAATCTTTG+CGG | 0.449874 | 3.1:-82879510 | None:intergenic |
| ATAATTGCTGATAGGTTTAG+TGG | 0.451449 | 3.1:-82880999 | None:intergenic |
| AAGAATGTGTATGAACCATT+TGG | 0.454547 | 3.1:-82879333 | None:intergenic |
| CATTTGAGATAACTTGCATC+AGG | 0.455640 | 3.1:-82881456 | None:intergenic |
| AAATGTAAATAATATTAAGA+TGG | 0.457937 | 3.1:+82881281 | MS.gene32770:CDS |
| TTTGGAGTTTAAGGCTTTGG+AGG | 0.458091 | 3.1:+82879267 | MS.gene32770:CDS |
| GGCGATCGGTGTGTTATAGA+TGG | 0.461972 | 3.1:+82880810 | MS.gene32770:CDS |
| TAGAAGAAGCCACACTACTA+TGG | 0.462238 | 3.1:-82880652 | None:intergenic |
| CAATTGAACAAGCTTGTGAC+AGG | 0.463263 | 3.1:+82880612 | MS.gene32770:CDS |
| GAGTCTGTAGAACATATTGA+TGG | 0.464278 | 3.1:-82879658 | None:intergenic |
| ATCTAGTGAATTAGAGATTG+TGG | 0.475217 | 3.1:-82879885 | None:intergenic |
| TTCTCAGCCTCTTCCATAAG+TGG | 0.477268 | 3.1:-82879692 | None:intergenic |
| CTATTGGCACAGTCAGAGAC+AGG | 0.477390 | 3.1:+82880401 | MS.gene32770:CDS |
| TGGGGCCCATCGATCCAAAC+TGG | 0.477880 | 3.1:+82879487 | MS.gene32770:CDS |
| ATTTATTCTTACTGGCAGCT+AGG | 0.481984 | 3.1:-82880013 | None:intergenic |
| TTTATTCTTACTGGCAGCTA+GGG | 0.484397 | 3.1:-82880012 | None:intergenic |
| AATGTAAATAATATTAAGAT+GGG | 0.490222 | 3.1:+82881282 | MS.gene32770:CDS |
| AGATCCTCCCCAGCAGGACC+TGG | 0.491696 | 3.1:-82879095 | None:intergenic |
| GTGGCATGTTAGTTACCAAA+TGG | 0.493145 | 3.1:+82879318 | MS.gene32770:CDS |
| CATTCGCCGAATAACAAGTC+TGG | 0.493585 | 3.1:+82879008 | MS.gene32770:CDS |
| GACCAAGCGGAGAAGTGAAC+TGG | 0.498225 | 3.1:+82881350 | MS.gene32770:CDS |
| GCGGAGAAGTGAACTGGTGA+TGG | 0.503744 | 3.1:+82881356 | MS.gene32770:CDS |
| CATTACAAACACGAAAATGA+TGG | 0.506172 | 3.1:-82880772 | None:intergenic |
| TATAAAGACGACGTTGCTAA+AGG | 0.506408 | 3.1:+82879577 | MS.gene32770:CDS |
| TGGGCCTCCACTTATGGAAG+AGG | 0.508208 | 3.1:+82879685 | MS.gene32770:CDS |
| ACAAGTCTGGAACGGTGAAT+CGG | 0.520222 | 3.1:+82879021 | MS.gene32770:CDS |
| TGGGTTGAAGCAATGTGTCC+AGG | 0.522262 | 3.1:+82879412 | MS.gene32770:CDS |
| ATCGGTGGAACTCCAAGTAT+TGG | 0.525832 | 3.1:+82879716 | MS.gene32770:CDS |
| TAGGGATGAACCTTATTTCA+GGG | 0.528282 | 3.1:-82878770 | None:intergenic |
| GGCATCTCCAGGTCCTGCTG+GGG | 0.531190 | 3.1:+82879088 | MS.gene32770:CDS |
| TCATCAAGATCCTCCCCAGC+AGG | 0.531246 | 3.1:-82879101 | None:intergenic |
| AAATTAGGATGCCAATATTG+TGG | 0.532913 | 3.1:-82881234 | None:intergenic |
| ACACCTTTGATGGCATCTCC+AGG | 0.537728 | 3.1:+82879077 | MS.gene32770:CDS |
| TAAAGAAATTACTAATGAGA+TGG | 0.537985 | 3.1:+82879943 | MS.gene32770:CDS |
| GATGAACACCTTGTGGAAGA+AGG | 0.541949 | 3.1:-82881419 | None:intergenic |
| AGCAAGAGAAAGTTTCCTCA+TGG | 0.550174 | 3.1:+82879819 | MS.gene32770:CDS |
| AACTGATCCAAATGAAAACC+TGG | 0.550631 | 3.1:-82879430 | None:intergenic |
| TGCTGATAGGTTTAGTGGCG+AGG | 0.552591 | 3.1:-82880994 | None:intergenic |
| GGACACATTGCTTCAACCCA+TGG | 0.552760 | 3.1:-82879409 | None:intergenic |
| GTCTCTGACTGTGCCAATAG+GGG | 0.557300 | 3.1:-82880398 | None:intergenic |
| CATGATCATGATCTTGGCCA+TGG | 0.567528 | 3.1:-82878683 | None:intergenic |
| AGAAATTACTAATGAGATGG+AGG | 0.569409 | 3.1:+82879946 | MS.gene32770:CDS |
| TAGATGCAGTGATGAATTCA+AGG | 0.569731 | 3.1:+82879858 | MS.gene32770:CDS |
| GTAATGCATCCGTTTGATGT+TGG | 0.570146 | 3.1:+82880789 | MS.gene32770:CDS |
| GAGGTATTGTATGCTTGTGA+TGG | 0.573031 | 3.1:+82879286 | MS.gene32770:CDS |
| GTTCCTATTTCAAATGTGAG+TGG | 0.582514 | 3.1:+82878657 | MS.gene32770:CDS |
| ATGGAAGAGGCTGAGAAGAT+CGG | 0.582758 | 3.1:+82879698 | MS.gene32770:CDS |
| ATGTTCTACAGACTCTCTCT+GGG | 0.597339 | 3.1:+82879666 | MS.gene32770:CDS |
| CGAGTACTAGCTGCGATGAG+AGG | 0.597969 | 3.1:-82880707 | None:intergenic |
| CAGTTTGGTTCTCCTCACAT+GGG | 0.599014 | 3.1:+82879448 | MS.gene32770:CDS |
| GGACCTGGAGATGCCATCAA+AGG | 0.599028 | 3.1:-82879080 | None:intergenic |
| TGTGACAGGGGTCCTAGTAG+TGG | 0.600912 | 3.1:+82880626 | MS.gene32770:CDS |
| GATCAAAGAAAGATTTGACA+TGG | 0.605754 | 3.1:-82879616 | None:intergenic |
| GATGGAGAACAGAAGAGAAG+TGG | 0.605995 | 3.1:+82878632 | MS.gene32770:CDS |
| TTATCAAGAACGTAAAGCAC+TGG | 0.607748 | 3.1:+82880554 | MS.gene32770:CDS |
| ATCCGTTTGATGTTGGCGAT+CGG | 0.612203 | 3.1:+82880796 | MS.gene32770:CDS |
| TCAAAACTAGGTATTTGGAG+AGG | 0.616066 | 3.1:+82881208 | MS.gene32770:intron |
| TCAGCCTCTTCCATAAGTGG+AGG | 0.616144 | 3.1:-82879689 | None:intergenic |
| TGATTAAAAGCACCCATGTG+AGG | 0.618150 | 3.1:-82879460 | None:intergenic |
| CAAAATCTTCATAGTCCATG+AGG | 0.622948 | 3.1:-82879834 | None:intergenic |
| AATTGAACAAGCTTGTGACA+GGG | 0.626996 | 3.1:+82880613 | MS.gene32770:CDS |
| GGGGAAGCACAGTTTAAAGG+TGG | 0.629078 | 3.1:-82878750 | None:intergenic |
| TAACGATTGAGAAACTGAGA+AGG | 0.630563 | 3.1:+82879237 | MS.gene32770:CDS |
| AGGGATGAACCTTATTTCAG+GGG | 0.633053 | 3.1:-82878769 | None:intergenic |
| AAAGTCTTTAGCAGATTGGG+TGG | 0.633331 | 3.1:+82880436 | MS.gene32770:CDS |
| AGGAAAGTTGAATCCAGTAG+AGG | 0.633754 | 3.1:+82879134 | MS.gene32770:CDS |
| GCCAATAGGGGAAATACCAA+AGG | 0.640515 | 3.1:-82880386 | None:intergenic |
| GAAGAGGCTGAGAAGATCGG+TGG | 0.642995 | 3.1:+82879701 | MS.gene32770:CDS |
| AAGCCCAAATATGGTTGACA+AGG | 0.643250 | 3.1:+82881027 | MS.gene32770:CDS |
| CTTCCTTAATCATGAAACGA+CGG | 0.644475 | 3.1:-82880358 | None:intergenic |
| TCAAATGTGAGTGGAGACCA+TGG | 0.645578 | 3.1:+82878666 | MS.gene32770:CDS |
| ATTGAACAAGCTTGTGACAG+GGG | 0.650888 | 3.1:+82880614 | MS.gene32770:CDS |
| AGGTGTTCATCTCAGACACA+TGG | 0.662617 | 3.1:+82881431 | MS.gene32770:CDS |
| CTCATCGCAGCTAGTACTCG+CGG | 0.664316 | 3.1:+82880710 | MS.gene32770:CDS |
| TTATTCTTACTGGCAGCTAG+GGG | 0.664425 | 3.1:-82880011 | None:intergenic |
| TGTCTGAGATGAACACCTTG+TGG | 0.664837 | 3.1:-82881426 | None:intergenic |
| GCCGAATAACAAGTCTGGAA+CGG | 0.665450 | 3.1:+82879013 | MS.gene32770:CDS |
| GTGTGTTATAGATGGTGTTG+AGG | 0.674889 | 3.1:+82880818 | MS.gene32770:CDS |
| AGGAGTACTACCGTTAATGG+CGG | 0.675857 | 3.1:+82879752 | MS.gene32770:CDS |
| TAGTGGTGACCATAGTAGTG+TGG | 0.677764 | 3.1:+82880643 | MS.gene32770:CDS |
| AGTTTGGAGAGAAGACCAAG+CGG | 0.683246 | 3.1:+82881337 | MS.gene32770:CDS |
| GGCGACTTTGTAGAGTAGCG+AGG | 0.692352 | 3.1:-82878729 | None:intergenic |
| GCGAAAGAGACTAACAACAA+AGG | 0.698200 | 3.1:+82879160 | MS.gene32770:CDS |
| AGATACAGCCTTCTTCCACA+AGG | 0.708237 | 3.1:+82881411 | MS.gene32770:CDS |
| TATTGGCACAGTCAGAGACA+GGG | 0.708405 | 3.1:+82880402 | MS.gene32770:CDS |
| GACACCAGCAGAGAAAATTG+GGG | 0.731623 | 3.1:+82881072 | MS.gene32770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGTAAATAATATTAAGA+TGG | + | chr3.1:82881281-82881300 | MS.gene32770:CDS | 10.0% |
| !! | AATGTAAATAATATTAAGAT+GGG | + | chr3.1:82881282-82881301 | MS.gene32770:CDS | 10.0% |
| !! | AAAATAACTTATAGCTTAAA+TGG | + | chr3.1:82880149-82880168 | MS.gene32770:intron | 15.0% |
| !!! | TTTATCTTCTTTTATAGATT+TGG | + | chr3.1:82880189-82880208 | MS.gene32770:intron | 15.0% |
| !! | AAAGAAAGACATTATTGATA+TGG | + | chr3.1:82879778-82879797 | MS.gene32770:CDS | 20.0% |
| !! | AAAGTTCTCTCATTATTAAT+AGG | + | chr3.1:82880315-82880334 | MS.gene32770:intron | 20.0% |
| !! | AAGTTCTCTCATTATTAATA+GGG | + | chr3.1:82880316-82880335 | MS.gene32770:intron | 20.0% |
| !! | AATAATGCATTTATTCTTAC+TGG | - | chr3.1:82880024-82880043 | None:intergenic | 20.0% |
| !! | ACTGAAAAATACAAACATTA+TGG | - | chr3.1:82880527-82880546 | None:intergenic | 20.0% |
| !! | TAAAGAAATTACTAATGAGA+TGG | + | chr3.1:82879943-82879962 | MS.gene32770:CDS | 20.0% |
| !! | TATATCATTCAAAATCTTTG+CGG | - | chr3.1:82879513-82879532 | None:intergenic | 20.0% |
| !!! | AGATTTTGAATGATATAACA+TGG | + | chr3.1:82879516-82879535 | MS.gene32770:CDS | 20.0% |
| !!! | ATTAATGCCTTTTAATTATC+TGG | + | chr3.1:82880888-82880907 | MS.gene32770:intron | 20.0% |
| !!! | GCTATAAGTTATTTTCTATA+AGG | - | chr3.1:82880144-82880163 | None:intergenic | 20.0% |
| !!! | TCTTTTAAAAGATTTTCTTG+TGG | - | chr3.1:82878841-82878860 | None:intergenic | 20.0% |
| ! | AACATTCCTGAAAATGTAAT+AGG | - | chr3.1:82879984-82880003 | None:intergenic | 25.0% |
| ! | AAGTAACATTCTCTTCAAAA+AGG | - | chr3.1:82878923-82878942 | None:intergenic | 25.0% |
| ! | AGTAACATTCTCTTCAAAAA+GGG | - | chr3.1:82878922-82878941 | None:intergenic | 25.0% |
| ! | ATCTTGATGAAATCATTTAC+AGG | + | chr3.1:82879114-82879133 | MS.gene32770:CDS | 25.0% |
| ! | TCAAACAACAAACTTCAATT+TGG | - | chr3.1:82880859-82880878 | None:intergenic | 25.0% |
| !! | CTGAAATTTTATCCTCAATA+TGG | + | chr3.1:82881125-82881144 | MS.gene32770:intron | 25.0% |
| !! | GAACTTTTTGTTGAAGAAAA+AGG | + | chr3.1:82879373-82879392 | MS.gene32770:CDS | 25.0% |
| !! | TGTTTAGATTGACTTAATTG+AGG | + | chr3.1:82880078-82880097 | MS.gene32770:intron | 25.0% |
| !!! | CTAATGTCTTTTTCAAAACT+AGG | + | chr3.1:82881196-82881215 | MS.gene32770:intron | 25.0% |
| !!! | CTTTTTCAAAACTAGGTATT+TGG | + | chr3.1:82881203-82881222 | MS.gene32770:intron | 25.0% |
| !!! | TGTTTGTATTTTTCAGTTGA+AGG | + | chr3.1:82880530-82880549 | MS.gene32770:intron | 25.0% |
| AAACTAAAATGGCCAATACT+TGG | - | chr3.1:82879731-82879750 | None:intergenic | 30.0% | |
| AAATTAGGATGCCAATATTG+TGG | - | chr3.1:82881237-82881256 | None:intergenic | 30.0% | |
| AAGAATGTGTATGAACCATT+TGG | - | chr3.1:82879336-82879355 | None:intergenic | 30.0% | |
| AATCATTTGTGAGACTGTTT+GGG | + | chr3.1:82880115-82880134 | MS.gene32770:intron | 30.0% | |
| ACAATGAACTTTCAAGAGTT+TGG | + | chr3.1:82881321-82881340 | MS.gene32770:CDS | 30.0% | |
| AGAAATTACTAATGAGATGG+AGG | + | chr3.1:82879946-82879965 | MS.gene32770:CDS | 30.0% | |
| ATAATTGCTGATAGGTTTAG+TGG | - | chr3.1:82881002-82881021 | None:intergenic | 30.0% | |
| ATAGCTGCCAGATAATTAAA+AGG | - | chr3.1:82880898-82880917 | None:intergenic | 30.0% | |
| ATCTAGTGAATTAGAGATTG+TGG | - | chr3.1:82879888-82879907 | None:intergenic | 30.0% | |
| ATTTGTCAACATCATAACGA+AGG | + | chr3.1:82880483-82880502 | MS.gene32770:intron | 30.0% | |
| CACTGAAAGAAAAAGTAAAG+AGG | + | chr3.1:82881095-82881114 | MS.gene32770:CDS | 30.0% | |
| CATTACAAACACGAAAATGA+TGG | - | chr3.1:82880775-82880794 | None:intergenic | 30.0% | |
| CGAAGGATTGAAATTATCTT+TGG | + | chr3.1:82880500-82880519 | MS.gene32770:intron | 30.0% | |
| CTTCTGTAATAATTGCTGAT+AGG | - | chr3.1:82881010-82881029 | None:intergenic | 30.0% | |
| GATCAAAGAAAGATTTGACA+TGG | - | chr3.1:82879619-82879638 | None:intergenic | 30.0% | |
| TAATCATTTGTGAGACTGTT+TGG | + | chr3.1:82880114-82880133 | MS.gene32770:intron | 30.0% | |
| TAGTACTCCTGAAACTAAAA+TGG | - | chr3.1:82879742-82879761 | None:intergenic | 30.0% | |
| TATCTGTTAGTTCACCTTAT+AGG | + | chr3.1:82878964-82878983 | MS.gene32770:CDS | 30.0% | |
| TCAAAAAGGGTTTCATCAAT+AGG | - | chr3.1:82878909-82878928 | None:intergenic | 30.0% | |
| TGTTCACCAAATCTTGATTT+GGG | - | chr3.1:82878879-82878898 | None:intergenic | 30.0% | |
| TTATTACAGAAGCCCAAATA+TGG | + | chr3.1:82881018-82881037 | MS.gene32770:CDS | 30.0% | |
| TTGTTAAATGCGTTCCTATA+AGG | - | chr3.1:82878981-82879000 | None:intergenic | 30.0% | |
| TTGTTCACCAAATCTTGATT+TGG | - | chr3.1:82878880-82878899 | None:intergenic | 30.0% | |
| TTTAATTATCTGGCAGCTAT+TGG | + | chr3.1:82880898-82880917 | MS.gene32770:intron | 30.0% | |
| ! | ATAAGACTTGTTCCATATTG+AGG | - | chr3.1:82881140-82881159 | None:intergenic | 30.0% |
| ! | CAATATTGGCATCCTAATTT+TGG | + | chr3.1:82881237-82881256 | MS.gene32770:CDS | 30.0% |
| ! | TTAAGTTGTTTATCCAACCA+TGG | + | chr3.1:82880235-82880254 | MS.gene32770:intron | 30.0% |
| AACTGATCCAAATGAAAACC+TGG | - | chr3.1:82879433-82879452 | None:intergenic | 35.0% | |
| AATTGAACAAGCTTGTGACA+GGG | + | chr3.1:82880613-82880632 | MS.gene32770:CDS | 35.0% | |
| ACAAAAATGCTCCAATGAGA+AGG | - | chr3.1:82879553-82879572 | None:intergenic | 35.0% | |
| AGATACCAAAACAAGGAGAA+GGG | - | chr3.1:82880275-82880294 | None:intergenic | 35.0% | |
| AGGGTTTCATCAATAGGATA+AGG | - | chr3.1:82878903-82878922 | None:intergenic | 35.0% | |
| ATTTATTCTTACTGGCAGCT+AGG | - | chr3.1:82880016-82880035 | None:intergenic | 35.0% | |
| CAAAAATGCTCCAATGAGAA+GGG | - | chr3.1:82879552-82879571 | None:intergenic | 35.0% | |
| CAAAATCTTCATAGTCCATG+AGG | - | chr3.1:82879837-82879856 | None:intergenic | 35.0% | |
| CAGAAAGTCTTTAGCAGATT+GGG | + | chr3.1:82880433-82880452 | MS.gene32770:CDS | 35.0% | |
| CTACCTTGTCAACCATATTT+GGG | - | chr3.1:82881033-82881052 | None:intergenic | 35.0% | |
| CTTCCTTAATCATGAAACGA+CGG | - | chr3.1:82880361-82880380 | None:intergenic | 35.0% | |
| GAGTCTGTAGAACATATTGA+TGG | - | chr3.1:82879661-82879680 | None:intergenic | 35.0% | |
| GATTAAGGAAGAAGTTCCTT+TGG | + | chr3.1:82880370-82880389 | MS.gene32770:CDS | 35.0% | |
| GTTCCTATTTCAAATGTGAG+TGG | + | chr3.1:82878657-82878676 | MS.gene32770:CDS | 35.0% | |
| TAACGATTGAGAAACTGAGA+AGG | + | chr3.1:82879237-82879256 | MS.gene32770:CDS | 35.0% | |
| TAGATGCAGTGATGAATTCA+AGG | + | chr3.1:82879858-82879877 | MS.gene32770:CDS | 35.0% | |
| TATAAAGACGACGTTGCTAA+AGG | + | chr3.1:82879577-82879596 | MS.gene32770:CDS | 35.0% | |
| TCAAAACTAGGTATTTGGAG+AGG | + | chr3.1:82881208-82881227 | MS.gene32770:intron | 35.0% | |
| TCAACTCATGATCATGATCT+TGG | - | chr3.1:82878692-82878711 | None:intergenic | 35.0% | |
| TCTAAGCCCAAATCAAGATT+TGG | + | chr3.1:82878870-82878889 | MS.gene32770:CDS | 35.0% | |
| TCTACCTTGTCAACCATATT+TGG | - | chr3.1:82881034-82881053 | None:intergenic | 35.0% | |
| TTATCAAGAACGTAAAGCAC+TGG | + | chr3.1:82880554-82880573 | MS.gene32770:CDS | 35.0% | |
| TTCACTACCAAGCCAAAATT+AGG | - | chr3.1:82881252-82881271 | None:intergenic | 35.0% | |
| TTTATTCTTACTGGCAGCTA+GGG | - | chr3.1:82880015-82880034 | None:intergenic | 35.0% | |
| ! | AATGTGTCCAGGTTTTCATT+TGG | + | chr3.1:82879423-82879442 | MS.gene32770:CDS | 35.0% |
| ! | CATTTGAGATAACTTGCATC+AGG | - | chr3.1:82881459-82881478 | None:intergenic | 35.0% |
| ! | CTTGTGATGGTAACATTTTG+TGG | + | chr3.1:82879299-82879318 | MS.gene32770:CDS | 35.0% |
| ! | GGTTTTCATTTGGATCAGTT+TGG | + | chr3.1:82879433-82879452 | MS.gene32770:CDS | 35.0% |
| ! | TAGGGATGAACCTTATTTCA+GGG | - | chr3.1:82878773-82878792 | None:intergenic | 35.0% |
| ! | TCTCCACTCACATTTGAAAT+AGG | - | chr3.1:82878663-82878682 | None:intergenic | 35.0% |
| !! | ATTTTCCCTTCTCCTTGTTT+TGG | + | chr3.1:82880267-82880286 | MS.gene32770:intron | 35.0% |
| !! | CTCATGGACTATGAAGATTT+TGG | + | chr3.1:82879835-82879854 | MS.gene32770:CDS | 35.0% |
| !! | GAGATTTTGGGGGTTTATTT+GGG | - | chr3.1:82878797-82878816 | None:intergenic | 35.0% |
| !! | TCTCATTGGAGCATTTTTGT+GGG | + | chr3.1:82879553-82879572 | MS.gene32770:CDS | 35.0% |
| !! | TTCTCATTGGAGCATTTTTG+TGG | + | chr3.1:82879552-82879571 | MS.gene32770:CDS | 35.0% |
| !!! | AAGGTGCTTTATTTTGTCCA+TGG | + | chr3.1:82879392-82879411 | MS.gene32770:CDS | 35.0% |
| !!! | AGGTGCTTTATTTTGTCCAT+GGG | + | chr3.1:82879393-82879412 | MS.gene32770:CDS | 35.0% |
| !!! | GTATTGGCCATTTTAGTTTC+AGG | + | chr3.1:82879732-82879751 | MS.gene32770:CDS | 35.0% |
| !!! | GTTTGTTTTTGTGTGCATTG+CGG | + | chr3.1:82879196-82879215 | MS.gene32770:CDS | 35.0% |
| !!! | TAATTTTGGCTTGGTAGTGA+AGG | + | chr3.1:82881251-82881270 | MS.gene32770:CDS | 35.0% |
| !!! | TTTGTTTTTGTGTGCATTGC+GGG | + | chr3.1:82879197-82879216 | MS.gene32770:CDS | 35.0% |
| AAAGTCTTTAGCAGATTGGG+TGG | + | chr3.1:82880436-82880455 | MS.gene32770:CDS | 40.0% | |
| AAATACACATAGGCCATGGT+TGG | - | chr3.1:82880251-82880270 | None:intergenic | 40.0% | |
| AAGCCCAAATATGGTTGACA+AGG | + | chr3.1:82881027-82881046 | MS.gene32770:CDS | 40.0% | |
| ACTCCGTCGTTTCATGATTA+AGG | + | chr3.1:82880355-82880374 | MS.gene32770:CDS | 40.0% | |
| AGCAAGAGAAAGTTTCCTCA+TGG | + | chr3.1:82879819-82879838 | MS.gene32770:CDS | 40.0% | |
| AGGAAAGTTGAATCCAGTAG+AGG | + | chr3.1:82879134-82879153 | MS.gene32770:CDS | 40.0% | |
| AGTAGTGTGGCTTCTTCTAA+TGG | + | chr3.1:82880656-82880675 | MS.gene32770:CDS | 40.0% | |
| ATGTTCTACAGACTCTCTCT+GGG | + | chr3.1:82879666-82879685 | MS.gene32770:CDS | 40.0% | |
| ATTGAACAAGCTTGTGACAG+GGG | + | chr3.1:82880614-82880633 | MS.gene32770:CDS | 40.0% | |
| CAATTGAACAAGCTTGTGAC+AGG | + | chr3.1:82880612-82880631 | MS.gene32770:CDS | 40.0% | |
| CAGATACCAAAACAAGGAGA+AGG | - | chr3.1:82880276-82880295 | None:intergenic | 40.0% | |
| CCAATCTGCTAAAGACTTTC+TGG | - | chr3.1:82880435-82880454 | None:intergenic | 40.0% | |
| CCAGAAAGTCTTTAGCAGAT+TGG | + | chr3.1:82880432-82880451 | MS.gene32770:CDS | 40.0% | |
| GAGTGACAGATACCAAAACA+AGG | - | chr3.1:82880282-82880301 | None:intergenic | 40.0% | |
| GCGAAAGAGACTAACAACAA+AGG | + | chr3.1:82879160-82879179 | MS.gene32770:CDS | 40.0% | |
| GGAGAAGGGAAAATACACAT+AGG | - | chr3.1:82880261-82880280 | None:intergenic | 40.0% | |
| GTAATGCATCCGTTTGATGT+TGG | + | chr3.1:82880789-82880808 | MS.gene32770:CDS | 40.0% | |
| GTGGCATGTTAGTTACCAAA+TGG | + | chr3.1:82879318-82879337 | MS.gene32770:CDS | 40.0% | |
| TAGAAGAAGCCACACTACTA+TGG | - | chr3.1:82880655-82880674 | None:intergenic | 40.0% | |
| TATGTTCTACAGACTCTCTC+TGG | + | chr3.1:82879665-82879684 | MS.gene32770:CDS | 40.0% | |
| TCCTTTGGTATTTCCCCTAT+TGG | + | chr3.1:82880385-82880404 | MS.gene32770:CDS | 40.0% | |
| TGGAGAGGAATCCACAATAT+TGG | + | chr3.1:82881223-82881242 | MS.gene32770:CDS | 40.0% | |
| TTATTCTTACTGGCAGCTAG+GGG | - | chr3.1:82880014-82880033 | None:intergenic | 40.0% | |
| TTTCTTTGTGCCGCCATTAA+CGG | - | chr3.1:82879765-82879784 | None:intergenic | 40.0% | |
| ! | ACTCTTGTTTCCCTTCTCAT+TGG | + | chr3.1:82879539-82879558 | MS.gene32770:CDS | 40.0% |
| ! | AGGGATGAACCTTATTTCAG+GGG | - | chr3.1:82878772-82878791 | None:intergenic | 40.0% |
| ! | ATTTGCAGCAGGAGATTTTG+GGG | - | chr3.1:82878808-82878827 | None:intergenic | 40.0% |
| ! | CAGCTGCCTATTACATTTTC+AGG | + | chr3.1:82879975-82879994 | MS.gene32770:CDS | 40.0% |
| ! | CATTTGCAGCAGGAGATTTT+GGG | - | chr3.1:82878809-82878828 | None:intergenic | 40.0% |
| ! | CTAGGGATGAACCTTATTTC+AGG | - | chr3.1:82878774-82878793 | None:intergenic | 40.0% |
| ! | GGGTGCTTTTAATCAATCGT+GGG | + | chr3.1:82879468-82879487 | MS.gene32770:CDS | 40.0% |
| ! | GGTGCTTTTAATCAATCGTG+GGG | + | chr3.1:82879469-82879488 | MS.gene32770:CDS | 40.0% |
| ! | GTAAGTTTTGCATTTGCAGC+AGG | - | chr3.1:82878819-82878838 | None:intergenic | 40.0% |
| ! | GTGTGTTATAGATGGTGTTG+AGG | + | chr3.1:82880818-82880837 | MS.gene32770:CDS | 40.0% |
| ! | TGGGTGCTTTTAATCAATCG+TGG | + | chr3.1:82879467-82879486 | MS.gene32770:CDS | 40.0% |
| ! | TTTGGAGTTTAAGGCTTTGG+AGG | + | chr3.1:82879267-82879286 | MS.gene32770:CDS | 40.0% |
| !! | ACCGTTCCAGACTTGTTATT+CGG | - | chr3.1:82879017-82879036 | None:intergenic | 40.0% |
| !! | AGCTTTGGAGTTTAAGGCTT+TGG | + | chr3.1:82879264-82879283 | MS.gene32770:CDS | 40.0% |
| !! | GAGGTATTGTATGCTTGTGA+TGG | + | chr3.1:82879286-82879305 | MS.gene32770:CDS | 40.0% |
| !! | GGAGATTTTGGGGGTTTATT+TGG | - | chr3.1:82878798-82878817 | None:intergenic | 40.0% |
| !! | TGATTAAAAGCACCCATGTG+AGG | - | chr3.1:82879463-82879482 | None:intergenic | 40.0% |
| !! | TTCAGGAGTACTACCGTTAA+TGG | + | chr3.1:82879749-82879768 | MS.gene32770:CDS | 40.0% |
| !!! | TTGGCATCCTAATTTTGGCT+TGG | + | chr3.1:82881242-82881261 | MS.gene32770:CDS | 40.0% |
| AACTGAGAAGGACAGAGCTT+TGG | + | chr3.1:82879249-82879268 | MS.gene32770:CDS | 45.0% | |
| ACGACACCAGCAGAGAAAAT+TGG | + | chr3.1:82881070-82881089 | MS.gene32770:CDS | 45.0% | |
| ACTGTGCTTCCCCTGAAATA+AGG | + | chr3.1:82878760-82878779 | MS.gene32770:CDS | 45.0% | |
| AGATACAGCCTTCTTCCACA+AGG | + | chr3.1:82881411-82881430 | MS.gene32770:CDS | 45.0% | |
| AGGTGTTCATCTCAGACACA+TGG | + | chr3.1:82881431-82881450 | MS.gene32770:CDS | 45.0% | |
| AGTTTGGAGAGAAGACCAAG+CGG | + | chr3.1:82881337-82881356 | MS.gene32770:CDS | 45.0% | |
| ATCCGTTTGATGTTGGCGAT+CGG | + | chr3.1:82880796-82880815 | MS.gene32770:CDS | 45.0% | |
| ATCGGTGGAACTCCAAGTAT+TGG | + | chr3.1:82879716-82879735 | MS.gene32770:CDS | 45.0% | |
| ATGGAAGAGGCTGAGAAGAT+CGG | + | chr3.1:82879698-82879717 | MS.gene32770:CDS | 45.0% | |
| CAAAATCTTTGCGGCCAGTT+TGG | - | chr3.1:82879504-82879523 | None:intergenic | 45.0% | |
| CACTCCTAGAACACCTTTGA+TGG | + | chr3.1:82879067-82879086 | MS.gene32770:CDS | 45.0% | |
| CATGATCATGATCTTGGCCA+TGG | - | chr3.1:82878686-82878705 | None:intergenic | 45.0% | |
| CATTCGCCGAATAACAAGTC+TGG | + | chr3.1:82879008-82879027 | MS.gene32770:CDS | 45.0% | |
| CGACACCAGCAGAGAAAATT+GGG | + | chr3.1:82881071-82881090 | MS.gene32770:CDS | 45.0% | |
| CTACTATGGTCACCACTACT+AGG | - | chr3.1:82880641-82880660 | None:intergenic | 45.0% | |
| CTTTAGCAGATTGGGTGGTA+AGG | + | chr3.1:82880441-82880460 | MS.gene32770:intron | 45.0% | |
| GACACCAGCAGAGAAAATTG+GGG | + | chr3.1:82881072-82881091 | MS.gene32770:CDS | 45.0% | |
| GATGAACACCTTGTGGAAGA+AGG | - | chr3.1:82881422-82881441 | None:intergenic | 45.0% | |
| GATGGAGAACAGAAGAGAAG+TGG | + | chr3.1:82878632-82878651 | MS.gene32770:CDS | 45.0% | |
| GCCAATAGGGGAAATACCAA+AGG | - | chr3.1:82880389-82880408 | None:intergenic | 45.0% | |
| GCCGAATAACAAGTCTGGAA+CGG | + | chr3.1:82879013-82879032 | MS.gene32770:CDS | 45.0% | |
| GGGAAAATACACATAGGCCA+TGG | - | chr3.1:82880255-82880274 | None:intergenic | 45.0% | |
| GGTTGACAAGGTAGAGTTCT+CGG | + | chr3.1:82881039-82881058 | MS.gene32770:CDS | 45.0% | |
| TACTCGCGGCTTTCATGTTT+GGG | + | chr3.1:82880724-82880743 | MS.gene32770:CDS | 45.0% | |
| TAGTGGTGACCATAGTAGTG+TGG | + | chr3.1:82880643-82880662 | MS.gene32770:CDS | 45.0% | |
| TATTGGCACAGTCAGAGACA+GGG | + | chr3.1:82880402-82880421 | MS.gene32770:CDS | 45.0% | |
| TCAAATGTGAGTGGAGACCA+TGG | + | chr3.1:82878666-82878685 | MS.gene32770:CDS | 45.0% | |
| TGTCTCTGACTGTGCCAATA+GGG | - | chr3.1:82880402-82880421 | None:intergenic | 45.0% | |
| TTCTCAGCCTCTTCCATAAG+TGG | - | chr3.1:82879695-82879714 | None:intergenic | 45.0% | |
| TTGGGGGTTTATTTGGGCTA+GGG | - | chr3.1:82878791-82878810 | None:intergenic | 45.0% | |
| TTTGGGGGTTTATTTGGGCT+AGG | - | chr3.1:82878792-82878811 | None:intergenic | 45.0% | |
| ! | ACAAGTCTGGAACGGTGAAT+CGG | + | chr3.1:82879021-82879040 | MS.gene32770:CDS | 45.0% |
| ! | GACGACGTTGCTAAAGGTTT+TGG | + | chr3.1:82879583-82879602 | MS.gene32770:CDS | 45.0% |
| ! | GCATTTGCAGCAGGAGATTT+TGG | - | chr3.1:82878810-82878829 | None:intergenic | 45.0% |
| ! | TCAGGGGAAGCACAGTTTAA+AGG | - | chr3.1:82878756-82878775 | None:intergenic | 45.0% |
| ! | TGTCTGAGATGAACACCTTG+TGG | - | chr3.1:82881429-82881448 | None:intergenic | 45.0% |
| ! | TTTGCAGCAGGAGATTTTGG+GGG | - | chr3.1:82878807-82878826 | None:intergenic | 45.0% |
| !! | AGGAGTACTACCGTTAATGG+CGG | + | chr3.1:82879752-82879771 | MS.gene32770:CDS | 45.0% |
| !! | CAGTTTGGTTCTCCTCACAT+GGG | + | chr3.1:82879448-82879467 | MS.gene32770:CDS | 45.0% |
| !! | GATGCCATCAAAGGTGTTCT+AGG | - | chr3.1:82879074-82879093 | None:intergenic | 45.0% |
| !! | GGACAGAGCTTTGGAGTTTA+AGG | + | chr3.1:82879258-82879277 | MS.gene32770:CDS | 45.0% |
| !! | TCAGTTTGGTTCTCCTCACA+TGG | + | chr3.1:82879447-82879466 | MS.gene32770:CDS | 45.0% |
| CACCGATCGCCAACATCAAA+CGG | - | chr3.1:82880801-82880820 | None:intergenic | 50.0% | |
| CTATTGGCACAGTCAGAGAC+AGG | + | chr3.1:82880401-82880420 | MS.gene32770:CDS | 50.0% | |
| CTGTCTCTGACTGTGCCAAT+AGG | - | chr3.1:82880403-82880422 | None:intergenic | 50.0% | |
| GGACACATTGCTTCAACCCA+TGG | - | chr3.1:82879412-82879431 | None:intergenic | 50.0% | |
| GGCGATCGGTGTGTTATAGA+TGG | + | chr3.1:82880810-82880829 | MS.gene32770:CDS | 50.0% | |
| GTACTCGCGGCTTTCATGTT+TGG | + | chr3.1:82880723-82880742 | MS.gene32770:CDS | 50.0% | |
| GTCTCTGACTGTGCCAATAG+GGG | - | chr3.1:82880401-82880420 | None:intergenic | 50.0% | |
| TCAGCCTCTTCCATAAGTGG+AGG | - | chr3.1:82879692-82879711 | None:intergenic | 50.0% | |
| TCTCTTTCGCTTGCCTCTAC+TGG | - | chr3.1:82879150-82879169 | None:intergenic | 50.0% | |
| TGCTGATAGGTTTAGTGGCG+AGG | - | chr3.1:82880997-82881016 | None:intergenic | 50.0% | |
| TTAGTGGCGAGGACAGAGTT+TGG | - | chr3.1:82880986-82881005 | None:intergenic | 50.0% | |
| ! | ACACCTTTGATGGCATCTCC+AGG | + | chr3.1:82879077-82879096 | MS.gene32770:CDS | 50.0% |
| ! | AGTGCCCCAATTTTCTCTGC+TGG | - | chr3.1:82881079-82881098 | None:intergenic | 50.0% |
| ! | GGGGAAGCACAGTTTAAAGG+TGG | - | chr3.1:82878753-82878772 | None:intergenic | 50.0% |
| ! | TGGGTTGAAGCAATGTGTCC+AGG | + | chr3.1:82879412-82879431 | MS.gene32770:CDS | 50.0% |
| CACCAGTTCACTTCTCCGCT+TGG | - | chr3.1:82881355-82881374 | None:intergenic | 55.0% | |
| CGAGTACTAGCTGCGATGAG+AGG | - | chr3.1:82880710-82880729 | None:intergenic | 55.0% | |
| CTCATCGCAGCTAGTACTCG+CGG | + | chr3.1:82880710-82880729 | MS.gene32770:CDS | 55.0% | |
| GAAGAGGCTGAGAAGATCGG+TGG | + | chr3.1:82879701-82879720 | MS.gene32770:CDS | 55.0% | |
| GACCAAGCGGAGAAGTGAAC+TGG | + | chr3.1:82881350-82881369 | MS.gene32770:CDS | 55.0% | |
| GCGGAGAAGTGAACTGGTGA+TGG | + | chr3.1:82881356-82881375 | MS.gene32770:CDS | 55.0% | |
| GGACCTGGAGATGCCATCAA+AGG | - | chr3.1:82879083-82879102 | None:intergenic | 55.0% | |
| GGCGACTTTGTAGAGTAGCG+AGG | - | chr3.1:82878732-82878751 | None:intergenic | 55.0% | |
| TCATCAAGATCCTCCCCAGC+AGG | - | chr3.1:82879104-82879123 | None:intergenic | 55.0% | |
| TCTCTCTGGGCCTCCACTTA+TGG | + | chr3.1:82879679-82879698 | MS.gene32770:CDS | 55.0% | |
| TGCGGCCAGTTTGGATCGAT+GGG | - | chr3.1:82879495-82879514 | None:intergenic | 55.0% | |
| TGGGCCTCCACTTATGGAAG+AGG | + | chr3.1:82879685-82879704 | MS.gene32770:CDS | 55.0% | |
| TGTGACAGGGGTCCTAGTAG+TGG | + | chr3.1:82880626-82880645 | MS.gene32770:CDS | 55.0% | |
| TTGCGGCCAGTTTGGATCGA+TGG | - | chr3.1:82879496-82879515 | None:intergenic | 55.0% | |
| ! | GTGCATTGCGGGTAGCTTGT+TGG | + | chr3.1:82879208-82879227 | MS.gene32770:CDS | 55.0% |
| ATGGCATCTCCAGGTCCTGC+TGG | + | chr3.1:82879086-82879105 | MS.gene32770:CDS | 60.0% | |
| TGGCATCTCCAGGTCCTGCT+GGG | + | chr3.1:82879087-82879106 | MS.gene32770:CDS | 60.0% | |
| TGGGGCCCATCGATCCAAAC+TGG | + | chr3.1:82879487-82879506 | MS.gene32770:CDS | 60.0% | |
| AGATCCTCCCCAGCAGGACC+TGG | - | chr3.1:82879098-82879117 | None:intergenic | 65.0% | |
| ATCTCCAGGTCCTGCTGGGG+AGG | + | chr3.1:82879091-82879110 | MS.gene32770:CDS | 65.0% | |
| GGCATCTCCAGGTCCTGCTG+GGG | + | chr3.1:82879088-82879107 | MS.gene32770:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 82878630 | 82881479 | 82878630 | ID=MS.gene32770 |
| chr3.1 | mRNA | 82878630 | 82881479 | 82878630 | ID=MS.gene32770.t1;Parent=MS.gene32770 |
| chr3.1 | exon | 82878630 | 82880023 | 82878630 | ID=MS.gene32770.t1.exon1;Parent=MS.gene32770.t1 |
| chr3.1 | CDS | 82878630 | 82880023 | 82878630 | ID=cds.MS.gene32770.t1;Parent=MS.gene32770.t1 |
| chr3.1 | exon | 82880337 | 82880457 | 82880337 | ID=MS.gene32770.t1.exon2;Parent=MS.gene32770.t1 |
| chr3.1 | CDS | 82880337 | 82880457 | 82880337 | ID=cds.MS.gene32770.t1;Parent=MS.gene32770.t1 |
| chr3.1 | exon | 82880546 | 82880839 | 82880546 | ID=MS.gene32770.t1.exon3;Parent=MS.gene32770.t1 |
| chr3.1 | CDS | 82880546 | 82880839 | 82880546 | ID=cds.MS.gene32770.t1;Parent=MS.gene32770.t1 |
| chr3.1 | exon | 82880914 | 82881116 | 82880914 | ID=MS.gene32770.t1.exon4;Parent=MS.gene32770.t1 |
| chr3.1 | CDS | 82880914 | 82881116 | 82880914 | ID=cds.MS.gene32770.t1;Parent=MS.gene32770.t1 |
| chr3.1 | exon | 82881218 | 82881479 | 82881218 | ID=MS.gene32770.t1.exon5;Parent=MS.gene32770.t1 |
| chr3.1 | CDS | 82881218 | 82881479 | 82881218 | ID=cds.MS.gene32770.t1;Parent=MS.gene32770.t1 |
| Gene Sequence |
| Protein sequence |
