Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014978.t1 | XP_003603197.1 | 96.3 | 759 | 26 | 1 | 1 | 757 | 14 | 772 | 0.00E+00 | 1404 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014978.t1 | Q9LYG9 | 55.6 | 720 | 293 | 10 | 32 | 746 | 33 | 730 | 1.4e-205 | 717.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014978.t1 | G7J8E1 | 96.3 | 759 | 26 | 1 | 1 | 757 | 14 | 772 | 0.0e+00 | 1404.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene42686 | MS.gene014978 | PPI |
| MS.gene32764 | MS.gene014978 | PPI |
| MS.gene062410 | MS.gene014978 | PPI |
| MS.gene014978 | MS.gene014981 | PPI |
| MS.gene42622 | MS.gene014978 | PPI |
| MS.gene32770 | MS.gene014978 | PPI |
| MS.gene014978 | MS.gene42628 | PPI |
| MS.gene014973 | MS.gene014978 | PPI |
| MS.gene42620 | MS.gene014978 | PPI |
| MS.gene32773 | MS.gene014978 | PPI |
| MS.gene014978 | MS.gene74110 | PPI |
| MS.gene014978 | MS.gene42688 | PPI |
| MS.gene97525 | MS.gene014978 | PPI |
| MS.gene42681 | MS.gene014978 | PPI |
| MS.gene014978 | MS.gene014973 | PPI |
| MS.gene014978 | MS.gene97525 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014978.t1 | MTR_3g104940 | 96.838 | 759 | 22 | 1 | 1 | 757 | 14 | 772 | 0.0 | 1514 |
| MS.gene014978.t1 | MTR_3g104990 | 87.237 | 760 | 89 | 2 | 1 | 757 | 17 | 771 | 0.0 | 1331 |
| MS.gene014978.t1 | MTR_3g104920 | 79.501 | 761 | 128 | 4 | 1 | 757 | 13 | 749 | 0.0 | 1209 |
| MS.gene014978.t1 | MTR_3g104920 | 79.501 | 761 | 128 | 4 | 1 | 757 | 1 | 737 | 0.0 | 1208 |
| MS.gene014978.t1 | MTR_2g041220 | 49.804 | 765 | 327 | 15 | 5 | 746 | 15 | 745 | 0.0 | 694 |
| MS.gene014978.t1 | MTR_8g071250 | 46.114 | 579 | 283 | 11 | 184 | 749 | 129 | 691 | 1.16e-166 | 497 |
| MS.gene014978.t1 | MTR_1g113850 | 39.940 | 671 | 339 | 11 | 129 | 749 | 254 | 910 | 1.85e-155 | 476 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014978.t1 | AT5G12080 | 57.639 | 720 | 278 | 10 | 32 | 746 | 33 | 730 | 0.0 | 821 |
| MS.gene014978.t1 | AT5G12080 | 57.639 | 720 | 278 | 10 | 32 | 746 | 33 | 730 | 0.0 | 821 |
| MS.gene014978.t1 | AT5G12080 | 57.639 | 720 | 278 | 10 | 32 | 746 | 33 | 730 | 0.0 | 821 |
| MS.gene014978.t1 | AT5G19520 | 53.748 | 707 | 308 | 8 | 41 | 746 | 50 | 738 | 0.0 | 755 |
| MS.gene014978.t1 | AT5G19520 | 53.748 | 707 | 308 | 8 | 41 | 746 | 50 | 738 | 0.0 | 755 |
| MS.gene014978.t1 | AT2G17010 | 40.984 | 610 | 312 | 8 | 177 | 749 | 292 | 890 | 6.15e-155 | 474 |
| MS.gene014978.t1 | AT3G14810 | 40.368 | 706 | 343 | 12 | 98 | 754 | 188 | 864 | 3.70e-154 | 471 |
| MS.gene014978.t1 | AT1G53470 | 40.120 | 668 | 347 | 12 | 129 | 749 | 199 | 860 | 6.80e-154 | 470 |
| MS.gene014978.t1 | AT1G78610 | 41.311 | 656 | 331 | 9 | 132 | 749 | 193 | 832 | 2.58e-152 | 465 |
| MS.gene014978.t1 | AT2G17000 | 40.826 | 605 | 320 | 10 | 177 | 749 | 225 | 823 | 1.14e-141 | 437 |
| MS.gene014978.t1 | AT2G17000 | 40.826 | 605 | 320 | 10 | 177 | 749 | 225 | 823 | 1.18e-141 | 437 |
| MS.gene014978.t1 | AT3G14810 | 37.819 | 706 | 326 | 13 | 98 | 754 | 188 | 829 | 1.25e-134 | 419 |
| MS.gene014978.t1 | AT2G17010 | 35.246 | 366 | 189 | 8 | 177 | 505 | 292 | 646 | 3.55e-61 | 218 |
Find 152 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTACCTTGTCAACCATATT+TGG | 0.086878 | 3.2:-86694503 | None:intergenic |
| CAATATTGGCATCCTAATTT+TGG | 0.137793 | 3.2:+86694709 | MS.gene014978:CDS |
| GGACAGAGCTTTGGAGTTTA+AGG | 0.149958 | 3.2:+86692730 | MS.gene014978:CDS |
| GCATTTGCAGCAGGAGATTT+TGG | 0.152219 | 3.2:-86692279 | None:intergenic |
| CCAATCTGCTAAAGACTTTC+TGG | 0.165787 | 3.2:-86693904 | None:intergenic |
| TATCTGTTAGTTCACCTTAT+AGG | 0.222459 | 3.2:+86692436 | MS.gene014978:CDS |
| ACGACACCAGCAGAGAAAAT+TGG | 0.226737 | 3.2:+86694542 | MS.gene014978:CDS |
| AAGTAACATTCTCTTCAAAA+AGG | 0.237514 | 3.2:-86692392 | None:intergenic |
| CTCATGGACTATGAAGATTT+TGG | 0.238303 | 3.2:+86693307 | MS.gene014978:CDS |
| TCTCTTTCGCTTGCCTATAC+TGG | 0.240893 | 3.2:-86692619 | None:intergenic |
| TCTCTCTGGGCCTCCACTTA+TGG | 0.256047 | 3.2:+86693151 | MS.gene014978:CDS |
| ACTCCGTCGTTTCATGATTA+AGG | 0.256189 | 3.2:+86693827 | MS.gene014978:CDS |
| ACAATGAACTTTCAAGAGTT+TGG | 0.262365 | 3.2:+86694793 | MS.gene014978:CDS |
| CTAGGGATGAACCTTATTTC+AGG | 0.265146 | 3.2:-86692243 | None:intergenic |
| TTGTTAAATGCGTTCCTATA+AGG | 0.266324 | 3.2:-86692450 | None:intergenic |
| CAAAATCTTTGCGGCCAGTT+TGG | 0.274734 | 3.2:-86692973 | None:intergenic |
| TCAGGGGAAGCACAGTTTAA+AGG | 0.276027 | 3.2:-86692225 | None:intergenic |
| TCCTTTGGTATTTCCCCTAT+TGG | 0.277648 | 3.2:+86693857 | MS.gene014978:CDS |
| TTGTTCACCAAATCTTGATT+TGG | 0.289978 | 3.2:-86692349 | None:intergenic |
| GTACTCGCGGCTTTCATGTT+TGG | 0.292967 | 3.2:+86694195 | MS.gene014978:CDS |
| GACGACGTTGCTAAAGGTTT+TGG | 0.297117 | 3.2:+86693055 | MS.gene014978:CDS |
| TTCAGGAGTACTACCGTTAA+TGG | 0.300594 | 3.2:+86693221 | MS.gene014978:CDS |
| TACTCGCGGCTTTCATGTTT+GGG | 0.302794 | 3.2:+86694196 | MS.gene014978:CDS |
| AGCTTTGGAGTTTAAGGCTT+TGG | 0.308174 | 3.2:+86692736 | MS.gene014978:CDS |
| ATGGCATCTCCAGGTCCTGC+TGG | 0.309195 | 3.2:+86692558 | MS.gene014978:CDS |
| TAGTACTCCTGAAACTAAAA+TGG | 0.314981 | 3.2:-86693211 | None:intergenic |
| TCTCCACTCACATTTGAAAT+AGG | 0.334324 | 3.2:-86692132 | None:intergenic |
| ACTGTGCTTCCCCTGAAATA+AGG | 0.336839 | 3.2:+86692232 | MS.gene014978:CDS |
| TGGAGAGGAATCCACAATAT+TGG | 0.337472 | 3.2:+86694695 | MS.gene014978:CDS |
| CGACACCAGCAGAGAAAATT+GGG | 0.337647 | 3.2:+86694543 | MS.gene014978:CDS |
| CACTCCTAGAACACCTTTGA+TGG | 0.340051 | 3.2:+86692539 | MS.gene014978:CDS |
| CTACCTTGTCAACCATATTT+GGG | 0.340360 | 3.2:-86694502 | None:intergenic |
| TTCACTACCAAGCCAAAATT+AGG | 0.347299 | 3.2:-86694721 | None:intergenic |
| ACTCTTGTTTCCCTTCTCAT+TGG | 0.349071 | 3.2:+86693011 | MS.gene014978:CDS |
| CTTCTGTAATAATTGCTGAT+AGG | 0.353608 | 3.2:-86694479 | None:intergenic |
| TTATTACAGAAGCCCAAATA+TGG | 0.356757 | 3.2:+86694490 | MS.gene014978:CDS |
| TGTTCACCAAATCTTGATTT+GGG | 0.359204 | 3.2:-86692348 | None:intergenic |
| ACCGTTCCAGACTTGTTATT+CGG | 0.360429 | 3.2:-86692486 | None:intergenic |
| AAAGAAAGACATTATTGATA+TGG | 0.362900 | 3.2:+86693250 | MS.gene014978:CDS |
| TGTCTCTGACTGTGCCAATA+GGG | 0.364319 | 3.2:-86693871 | None:intergenic |
| AACATTCCTGAAAATGTAAT+AGG | 0.365241 | 3.2:-86693453 | None:intergenic |
| TCTAAGCCCAAATCAAGATT+TGG | 0.370555 | 3.2:+86692342 | MS.gene014978:CDS |
| ATCTTGATGAAATCATTTAC+AGG | 0.371328 | 3.2:+86692586 | MS.gene014978:CDS |
| TTTCTTTGTGCCGCCATTAA+CGG | 0.374402 | 3.2:-86693234 | None:intergenic |
| CAGAAAGTCTTTAGCAGATT+GGG | 0.374694 | 3.2:+86693905 | MS.gene014978:CDS |
| CCAGAAAGTCTTTAGCAGAT+TGG | 0.385016 | 3.2:+86693904 | MS.gene014978:CDS |
| AGTAGTGTGGCTTCTTCTAA+TGG | 0.385108 | 3.2:+86694128 | MS.gene014978:CDS |
| GATGCCATCAAAGGTGTTCT+AGG | 0.387245 | 3.2:-86692543 | None:intergenic |
| TCAACTCATGATCATGATCT+TGG | 0.387525 | 3.2:-86692161 | None:intergenic |
| TATGTTCTACAGACTCTCTC+TGG | 0.390416 | 3.2:+86693137 | MS.gene014978:CDS |
| CTGTCTCTGACTGTGCCAAT+AGG | 0.392993 | 3.2:-86693872 | None:intergenic |
| AACTGAGAAGGACAGAGCTT+TGG | 0.400147 | 3.2:+86692721 | MS.gene014978:CDS |
| CACCAGTTCACTTCTCCGCT+TGG | 0.404807 | 3.2:-86694824 | None:intergenic |
| CTACTATGGTCACCACTACT+AGG | 0.414873 | 3.2:-86694110 | None:intergenic |
| TTAGTGGCGAGGACAGAGTT+TGG | 0.415287 | 3.2:-86694455 | None:intergenic |
| TGCGGCCAGTTTGGATCGAT+GGG | 0.415753 | 3.2:-86692964 | None:intergenic |
| ATCTCCAGGTCCTGCTGGGG+AGG | 0.420002 | 3.2:+86692563 | MS.gene014978:CDS |
| GATTAAGGAAGAAGTTCCTT+TGG | 0.428446 | 3.2:+86693842 | MS.gene014978:CDS |
| TTGCGGCCAGTTTGGATCGA+TGG | 0.433487 | 3.2:-86692965 | None:intergenic |
| CACCGATCGCCAACATCAAA+CGG | 0.435576 | 3.2:-86694270 | None:intergenic |
| GTGCATTGCGGGTAGCTTGT+TGG | 0.437117 | 3.2:+86692680 | MS.gene014978:CDS |
| TGGCATCTCCAGGTCCTGCT+GGG | 0.444037 | 3.2:+86692559 | MS.gene014978:CDS |
| AGGGTTTCATCAATAGGATA+AGG | 0.446597 | 3.2:-86692372 | None:intergenic |
| TCAGTTTGGTTCTCCTCACA+TGG | 0.448034 | 3.2:+86692919 | MS.gene014978:CDS |
| AAACTAAAATGGCCAATACT+TGG | 0.448771 | 3.2:-86693200 | None:intergenic |
| GGTTGACAAGGTAGAGTTCT+CGG | 0.449379 | 3.2:+86694511 | MS.gene014978:CDS |
| TATATCATTCAAAATCTTTG+CGG | 0.449874 | 3.2:-86692982 | None:intergenic |
| ATAATTGCTGATAGGTTTAG+TGG | 0.451449 | 3.2:-86694471 | None:intergenic |
| AAGAATGTGTATGAACCATT+TGG | 0.454547 | 3.2:-86692805 | None:intergenic |
| CATTTGAGATAACTTGCATC+AGG | 0.455640 | 3.2:-86694928 | None:intergenic |
| AAATGTAAATAATATTAAGA+TGG | 0.457937 | 3.2:+86694753 | MS.gene014978:CDS |
| TTTGGAGTTTAAGGCTTTGG+AGG | 0.458091 | 3.2:+86692739 | MS.gene014978:CDS |
| GGCGATCGGTGTGTTATAGA+TGG | 0.461972 | 3.2:+86694282 | MS.gene014978:CDS |
| TAGAAGAAGCCACACTACTA+TGG | 0.462238 | 3.2:-86694124 | None:intergenic |
| CAATTGAACAAGCTTGTGAC+AGG | 0.463263 | 3.2:+86694084 | MS.gene014978:CDS |
| GAGTCTGTAGAACATATTGA+TGG | 0.464278 | 3.2:-86693130 | None:intergenic |
| ATCTAGTGAATTAGAGATTG+TGG | 0.475217 | 3.2:-86693357 | None:intergenic |
| TTCTCAGCCTCTTCCATAAG+TGG | 0.477268 | 3.2:-86693164 | None:intergenic |
| CTATTGGCACAGTCAGAGAC+AGG | 0.477390 | 3.2:+86693873 | MS.gene014978:CDS |
| TGGGGCCCATCGATCCAAAC+TGG | 0.477880 | 3.2:+86692959 | MS.gene014978:CDS |
| ATTTATTCTTACTGGCAGCT+AGG | 0.481984 | 3.2:-86693485 | None:intergenic |
| TTTATTCTTACTGGCAGCTA+GGG | 0.484397 | 3.2:-86693484 | None:intergenic |
| AATGTAAATAATATTAAGAT+GGG | 0.490222 | 3.2:+86694754 | MS.gene014978:CDS |
| AGATCCTCCCCAGCAGGACC+TGG | 0.491696 | 3.2:-86692567 | None:intergenic |
| GTGGCATGTTAGTTACCAAA+TGG | 0.493145 | 3.2:+86692790 | MS.gene014978:CDS |
| CATTCGCCGAATAACAAGTC+TGG | 0.493585 | 3.2:+86692480 | MS.gene014978:CDS |
| GACCAAGCGGAGAAGTGAAC+TGG | 0.498225 | 3.2:+86694822 | MS.gene014978:CDS |
| AGGAAAGTTGAATCCAGTAT+AGG | 0.503358 | 3.2:+86692606 | MS.gene014978:CDS |
| GCGGAGAAGTGAACTGGTGA+TGG | 0.503744 | 3.2:+86694828 | MS.gene014978:CDS |
| CATTACAAACACGAAAATGA+TGG | 0.506172 | 3.2:-86694244 | None:intergenic |
| TATAAAGACGACGTTGCTAA+AGG | 0.506408 | 3.2:+86693049 | MS.gene014978:CDS |
| TGGGCCTCCACTTATGGAAG+AGG | 0.508208 | 3.2:+86693157 | MS.gene014978:CDS |
| ACAAGTCTGGAACGGTGAAT+CGG | 0.520222 | 3.2:+86692493 | MS.gene014978:CDS |
| TGGGTTGAAGCAATGTGTCC+AGG | 0.522262 | 3.2:+86692884 | MS.gene014978:CDS |
| ATCGGTGGAACTCCAAGTAT+TGG | 0.525832 | 3.2:+86693188 | MS.gene014978:CDS |
| TAGGGATGAACCTTATTTCA+GGG | 0.528282 | 3.2:-86692242 | None:intergenic |
| GGCATCTCCAGGTCCTGCTG+GGG | 0.531190 | 3.2:+86692560 | MS.gene014978:CDS |
| TCATCAAGATCCTCCCCAGC+AGG | 0.531246 | 3.2:-86692573 | None:intergenic |
| AAATTAGGATGCCAATATTG+TGG | 0.532913 | 3.2:-86694706 | None:intergenic |
| ACACCTTTGATGGCATCTCC+AGG | 0.537728 | 3.2:+86692549 | MS.gene014978:CDS |
| TAAAGAAATTACTAATGAGA+TGG | 0.537985 | 3.2:+86693415 | MS.gene014978:CDS |
| GATGAACACCTTGTGGAAGA+AGG | 0.541949 | 3.2:-86694891 | None:intergenic |
| AGCAAGAGAAAGTTTCCTCA+TGG | 0.550174 | 3.2:+86693291 | MS.gene014978:CDS |
| AACTGATCCAAATGAAAACC+TGG | 0.550631 | 3.2:-86692902 | None:intergenic |
| TGCTGATAGGTTTAGTGGCG+AGG | 0.552591 | 3.2:-86694466 | None:intergenic |
| GGACACATTGCTTCAACCCA+TGG | 0.552760 | 3.2:-86692881 | None:intergenic |
| GTCTCTGACTGTGCCAATAG+GGG | 0.557300 | 3.2:-86693870 | None:intergenic |
| CATGATCATGATCTTGGCCA+TGG | 0.567528 | 3.2:-86692155 | None:intergenic |
| AGAAATTACTAATGAGATGG+AGG | 0.569409 | 3.2:+86693418 | MS.gene014978:CDS |
| TAGATGCAGTGATGAATTCA+AGG | 0.569731 | 3.2:+86693330 | MS.gene014978:CDS |
| GTAATGCATCCGTTTGATGT+TGG | 0.570146 | 3.2:+86694261 | MS.gene014978:CDS |
| GAGGTATTGTATGCTTGTGA+TGG | 0.573031 | 3.2:+86692758 | MS.gene014978:CDS |
| GTTCCTATTTCAAATGTGAG+TGG | 0.582514 | 3.2:+86692129 | MS.gene014978:CDS |
| ATGGAAGAGGCTGAGAAGAT+CGG | 0.582758 | 3.2:+86693170 | MS.gene014978:CDS |
| ATGTTCTACAGACTCTCTCT+GGG | 0.597339 | 3.2:+86693138 | MS.gene014978:CDS |
| CGAGTACTAGCTGCGATGAG+AGG | 0.597969 | 3.2:-86694179 | None:intergenic |
| CAGTTTGGTTCTCCTCACAT+GGG | 0.599014 | 3.2:+86692920 | MS.gene014978:CDS |
| GGACCTGGAGATGCCATCAA+AGG | 0.599028 | 3.2:-86692552 | None:intergenic |
| TGTGACAGGGGTCCTAGTAG+TGG | 0.600912 | 3.2:+86694098 | MS.gene014978:CDS |
| GATCAAAGAAAGATTTGACA+TGG | 0.605754 | 3.2:-86693088 | None:intergenic |
| GATGGAGAACAGAAGAGAAG+TGG | 0.605995 | 3.2:+86692104 | MS.gene014978:CDS |
| TTATCAAGAACGTAAAGCAC+TGG | 0.607748 | 3.2:+86694026 | MS.gene014978:CDS |
| ATCCGTTTGATGTTGGCGAT+CGG | 0.612203 | 3.2:+86694268 | MS.gene014978:CDS |
| TCAAAACTAGGTATTTGGAG+AGG | 0.616066 | 3.2:+86694680 | MS.gene014978:intron |
| TCAGCCTCTTCCATAAGTGG+AGG | 0.616144 | 3.2:-86693161 | None:intergenic |
| TGATTAAAAGCACCCATGTG+AGG | 0.618150 | 3.2:-86692932 | None:intergenic |
| CAAAATCTTCATAGTCCATG+AGG | 0.622948 | 3.2:-86693306 | None:intergenic |
| AATTGAACAAGCTTGTGACA+GGG | 0.626996 | 3.2:+86694085 | MS.gene014978:CDS |
| GGGGAAGCACAGTTTAAAGG+TGG | 0.629078 | 3.2:-86692222 | None:intergenic |
| TAACGATTGAGAAACTGAGA+AGG | 0.630563 | 3.2:+86692709 | MS.gene014978:CDS |
| AGGGATGAACCTTATTTCAG+GGG | 0.633053 | 3.2:-86692241 | None:intergenic |
| AAAGTCTTTAGCAGATTGGG+TGG | 0.633331 | 3.2:+86693908 | MS.gene014978:CDS |
| GCCAATAGGGGAAATACCAA+AGG | 0.640515 | 3.2:-86693858 | None:intergenic |
| GAAGAGGCTGAGAAGATCGG+TGG | 0.642995 | 3.2:+86693173 | MS.gene014978:CDS |
| AAGCCCAAATATGGTTGACA+AGG | 0.643250 | 3.2:+86694499 | MS.gene014978:CDS |
| CTTCCTTAATCATGAAACGA+CGG | 0.644475 | 3.2:-86693830 | None:intergenic |
| TCAAATGTGAGTGGAGACCA+TGG | 0.645578 | 3.2:+86692138 | MS.gene014978:CDS |
| ATTGAACAAGCTTGTGACAG+GGG | 0.650888 | 3.2:+86694086 | MS.gene014978:CDS |
| AGGTGTTCATCTCAGACACA+TGG | 0.662617 | 3.2:+86694903 | MS.gene014978:CDS |
| CTCATCGCAGCTAGTACTCG+CGG | 0.664316 | 3.2:+86694182 | MS.gene014978:CDS |
| TTATTCTTACTGGCAGCTAG+GGG | 0.664425 | 3.2:-86693483 | None:intergenic |
| TGTCTGAGATGAACACCTTG+TGG | 0.664837 | 3.2:-86694898 | None:intergenic |
| GCCGAATAACAAGTCTGGAA+CGG | 0.665450 | 3.2:+86692485 | MS.gene014978:CDS |
| GTGTGTTATAGATGGTGTTG+AGG | 0.674889 | 3.2:+86694290 | MS.gene014978:CDS |
| AGGAGTACTACCGTTAATGG+CGG | 0.675857 | 3.2:+86693224 | MS.gene014978:CDS |
| TAGTGGTGACCATAGTAGTG+TGG | 0.677764 | 3.2:+86694115 | MS.gene014978:CDS |
| AGTTTGGAGAGAAGACCAAG+CGG | 0.683246 | 3.2:+86694809 | MS.gene014978:CDS |
| GGCGACTTTGTAGAGTAGCG+AGG | 0.692352 | 3.2:-86692201 | None:intergenic |
| GCGAAAGAGACTAACAACAA+AGG | 0.698200 | 3.2:+86692632 | MS.gene014978:CDS |
| AGATACAGCCTTCTTCCACA+AGG | 0.708237 | 3.2:+86694883 | MS.gene014978:CDS |
| TATTGGCACAGTCAGAGACA+GGG | 0.708405 | 3.2:+86693874 | MS.gene014978:CDS |
| GACACCAGCAGAGAAAATTG+GGG | 0.731623 | 3.2:+86694544 | MS.gene014978:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGTAAATAATATTAAGA+TGG | + | chr3.2:86694753-86694772 | MS.gene014978:CDS | 10.0% |
| !! | AATGTAAATAATATTAAGAT+GGG | + | chr3.2:86694754-86694773 | MS.gene014978:CDS | 10.0% |
| !! | AAAATAACTTATAGCTTAAA+TGG | + | chr3.2:86693621-86693640 | MS.gene014978:intron | 15.0% |
| !! | TCAAACAACAAAATTAAATT+TGG | - | chr3.2:86694331-86694350 | None:intergenic | 15.0% |
| !!! | TTTATCTTCTTTTATAGATT+TGG | + | chr3.2:86693661-86693680 | MS.gene014978:intron | 15.0% |
| !! | AAAGAAAGACATTATTGATA+TGG | + | chr3.2:86693250-86693269 | MS.gene014978:CDS | 20.0% |
| !! | AAAGTTCTCTCATTATTAAT+AGG | + | chr3.2:86693787-86693806 | MS.gene014978:intron | 20.0% |
| !! | AAGTTCTCTCATTATTAATA+GGG | + | chr3.2:86693788-86693807 | MS.gene014978:intron | 20.0% |
| !! | AATAATGCATTTATTCTTAC+TGG | - | chr3.2:86693496-86693515 | None:intergenic | 20.0% |
| !! | ACTGAAAAATACAAACATTA+TGG | - | chr3.2:86693999-86694018 | None:intergenic | 20.0% |
| !! | TAAAGAAATTACTAATGAGA+TGG | + | chr3.2:86693415-86693434 | MS.gene014978:CDS | 20.0% |
| !! | TATATCATTCAAAATCTTTG+CGG | - | chr3.2:86692985-86693004 | None:intergenic | 20.0% |
| !!! | AGATTTTGAATGATATAACA+TGG | + | chr3.2:86692988-86693007 | MS.gene014978:CDS | 20.0% |
| !!! | ATTAATGCCTTTTAATTATC+TGG | + | chr3.2:86694360-86694379 | MS.gene014978:intron | 20.0% |
| !!! | GCTATAAGTTATTTTCTATA+AGG | - | chr3.2:86693616-86693635 | None:intergenic | 20.0% |
| !!! | TCTTTTAAAAGATTTTCTTG+TGG | - | chr3.2:86692313-86692332 | None:intergenic | 20.0% |
| ! | AACATTCCTGAAAATGTAAT+AGG | - | chr3.2:86693456-86693475 | None:intergenic | 25.0% |
| ! | AAGTAACATTCTCTTCAAAA+AGG | - | chr3.2:86692395-86692414 | None:intergenic | 25.0% |
| ! | AGTAACATTCTCTTCAAAAA+GGG | - | chr3.2:86692394-86692413 | None:intergenic | 25.0% |
| ! | ATCTTGATGAAATCATTTAC+AGG | + | chr3.2:86692586-86692605 | MS.gene014978:CDS | 25.0% |
| !! | CTGAAATTTTATCCTCAATA+TGG | + | chr3.2:86694597-86694616 | MS.gene014978:intron | 25.0% |
| !! | GAACTTTTTGTTGAAGAAAA+AGG | + | chr3.2:86692845-86692864 | MS.gene014978:CDS | 25.0% |
| !! | TGTTTAGATTGACTTAATTG+AGG | + | chr3.2:86693550-86693569 | MS.gene014978:intron | 25.0% |
| !!! | CTAATGTCTTTTTCAAAACT+AGG | + | chr3.2:86694668-86694687 | MS.gene014978:intron | 25.0% |
| !!! | CTTTTTCAAAACTAGGTATT+TGG | + | chr3.2:86694675-86694694 | MS.gene014978:intron | 25.0% |
| !!! | TGTTTGTATTTTTCAGTTGA+AGG | + | chr3.2:86694002-86694021 | MS.gene014978:intron | 25.0% |
| AAACTAAAATGGCCAATACT+TGG | - | chr3.2:86693203-86693222 | None:intergenic | 30.0% | |
| AAATTAGGATGCCAATATTG+TGG | - | chr3.2:86694709-86694728 | None:intergenic | 30.0% | |
| AAGAATGTGTATGAACCATT+TGG | - | chr3.2:86692808-86692827 | None:intergenic | 30.0% | |
| AATCATTTGTGAGACTGTTT+GGG | + | chr3.2:86693587-86693606 | MS.gene014978:intron | 30.0% | |
| ACAATGAACTTTCAAGAGTT+TGG | + | chr3.2:86694793-86694812 | MS.gene014978:CDS | 30.0% | |
| AGAAATTACTAATGAGATGG+AGG | + | chr3.2:86693418-86693437 | MS.gene014978:CDS | 30.0% | |
| ATAATTGCTGATAGGTTTAG+TGG | - | chr3.2:86694474-86694493 | None:intergenic | 30.0% | |
| ATAGCTGCCAGATAATTAAA+AGG | - | chr3.2:86694370-86694389 | None:intergenic | 30.0% | |
| ATCTAGTGAATTAGAGATTG+TGG | - | chr3.2:86693360-86693379 | None:intergenic | 30.0% | |
| ATTTGTCAACATCATAACGA+AGG | + | chr3.2:86693955-86693974 | MS.gene014978:intron | 30.0% | |
| CACTGAAAGAAAAAGTAAAG+AGG | + | chr3.2:86694567-86694586 | MS.gene014978:CDS | 30.0% | |
| CATTACAAACACGAAAATGA+TGG | - | chr3.2:86694247-86694266 | None:intergenic | 30.0% | |
| CGAAGGATTGAAATTATCTT+TGG | + | chr3.2:86693972-86693991 | MS.gene014978:intron | 30.0% | |
| CTTCTGTAATAATTGCTGAT+AGG | - | chr3.2:86694482-86694501 | None:intergenic | 30.0% | |
| GATCAAAGAAAGATTTGACA+TGG | - | chr3.2:86693091-86693110 | None:intergenic | 30.0% | |
| TAATCATTTGTGAGACTGTT+TGG | + | chr3.2:86693586-86693605 | MS.gene014978:intron | 30.0% | |
| TAGTACTCCTGAAACTAAAA+TGG | - | chr3.2:86693214-86693233 | None:intergenic | 30.0% | |
| TATCTGTTAGTTCACCTTAT+AGG | + | chr3.2:86692436-86692455 | MS.gene014978:CDS | 30.0% | |
| TCAAAAAGGGTTTCATCAAT+AGG | - | chr3.2:86692381-86692400 | None:intergenic | 30.0% | |
| TGTTCACCAAATCTTGATTT+GGG | - | chr3.2:86692351-86692370 | None:intergenic | 30.0% | |
| TTATTACAGAAGCCCAAATA+TGG | + | chr3.2:86694490-86694509 | MS.gene014978:CDS | 30.0% | |
| TTGTTAAATGCGTTCCTATA+AGG | - | chr3.2:86692453-86692472 | None:intergenic | 30.0% | |
| TTGTTCACCAAATCTTGATT+TGG | - | chr3.2:86692352-86692371 | None:intergenic | 30.0% | |
| TTTAATTATCTGGCAGCTAT+TGG | + | chr3.2:86694370-86694389 | MS.gene014978:intron | 30.0% | |
| ! | ATAAGACTTGTTCCATATTG+AGG | - | chr3.2:86694612-86694631 | None:intergenic | 30.0% |
| ! | CAATATTGGCATCCTAATTT+TGG | + | chr3.2:86694709-86694728 | MS.gene014978:CDS | 30.0% |
| ! | TTAAGTTGTTTATCCAACCA+TGG | + | chr3.2:86693707-86693726 | MS.gene014978:intron | 30.0% |
| AACTGATCCAAATGAAAACC+TGG | - | chr3.2:86692905-86692924 | None:intergenic | 35.0% | |
| AATTGAACAAGCTTGTGACA+GGG | + | chr3.2:86694085-86694104 | MS.gene014978:CDS | 35.0% | |
| ACAAAAATGCTCCAATGAGA+AGG | - | chr3.2:86693025-86693044 | None:intergenic | 35.0% | |
| AGATACCAAAACAAGGAGAA+GGG | - | chr3.2:86693747-86693766 | None:intergenic | 35.0% | |
| AGGAAAGTTGAATCCAGTAT+AGG | + | chr3.2:86692606-86692625 | MS.gene014978:CDS | 35.0% | |
| AGGGTTTCATCAATAGGATA+AGG | - | chr3.2:86692375-86692394 | None:intergenic | 35.0% | |
| ATTTATTCTTACTGGCAGCT+AGG | - | chr3.2:86693488-86693507 | None:intergenic | 35.0% | |
| CAAAAATGCTCCAATGAGAA+GGG | - | chr3.2:86693024-86693043 | None:intergenic | 35.0% | |
| CAAAATCTTCATAGTCCATG+AGG | - | chr3.2:86693309-86693328 | None:intergenic | 35.0% | |
| CAGAAAGTCTTTAGCAGATT+GGG | + | chr3.2:86693905-86693924 | MS.gene014978:CDS | 35.0% | |
| CTACCTTGTCAACCATATTT+GGG | - | chr3.2:86694505-86694524 | None:intergenic | 35.0% | |
| CTTCCTTAATCATGAAACGA+CGG | - | chr3.2:86693833-86693852 | None:intergenic | 35.0% | |
| GAGTCTGTAGAACATATTGA+TGG | - | chr3.2:86693133-86693152 | None:intergenic | 35.0% | |
| GATTAAGGAAGAAGTTCCTT+TGG | + | chr3.2:86693842-86693861 | MS.gene014978:CDS | 35.0% | |
| GTTCCTATTTCAAATGTGAG+TGG | + | chr3.2:86692129-86692148 | MS.gene014978:CDS | 35.0% | |
| TAACGATTGAGAAACTGAGA+AGG | + | chr3.2:86692709-86692728 | MS.gene014978:CDS | 35.0% | |
| TAGATGCAGTGATGAATTCA+AGG | + | chr3.2:86693330-86693349 | MS.gene014978:CDS | 35.0% | |
| TATAAAGACGACGTTGCTAA+AGG | + | chr3.2:86693049-86693068 | MS.gene014978:CDS | 35.0% | |
| TCAAAACTAGGTATTTGGAG+AGG | + | chr3.2:86694680-86694699 | MS.gene014978:intron | 35.0% | |
| TCAACTCATGATCATGATCT+TGG | - | chr3.2:86692164-86692183 | None:intergenic | 35.0% | |
| TCTAAGCCCAAATCAAGATT+TGG | + | chr3.2:86692342-86692361 | MS.gene014978:CDS | 35.0% | |
| TCTACCTTGTCAACCATATT+TGG | - | chr3.2:86694506-86694525 | None:intergenic | 35.0% | |
| TTATCAAGAACGTAAAGCAC+TGG | + | chr3.2:86694026-86694045 | MS.gene014978:CDS | 35.0% | |
| TTCACTACCAAGCCAAAATT+AGG | - | chr3.2:86694724-86694743 | None:intergenic | 35.0% | |
| TTTATTCTTACTGGCAGCTA+GGG | - | chr3.2:86693487-86693506 | None:intergenic | 35.0% | |
| ! | AATGTGTCCAGGTTTTCATT+TGG | + | chr3.2:86692895-86692914 | MS.gene014978:CDS | 35.0% |
| ! | CATTTGAGATAACTTGCATC+AGG | - | chr3.2:86694931-86694950 | None:intergenic | 35.0% |
| ! | CTTGTGATGGTAACATTTTG+TGG | + | chr3.2:86692771-86692790 | MS.gene014978:CDS | 35.0% |
| ! | GGTTTTCATTTGGATCAGTT+TGG | + | chr3.2:86692905-86692924 | MS.gene014978:CDS | 35.0% |
| ! | TAGGGATGAACCTTATTTCA+GGG | - | chr3.2:86692245-86692264 | None:intergenic | 35.0% |
| ! | TCTCCACTCACATTTGAAAT+AGG | - | chr3.2:86692135-86692154 | None:intergenic | 35.0% |
| !! | ATTTTCCCTTCTCCTTGTTT+TGG | + | chr3.2:86693739-86693758 | MS.gene014978:intron | 35.0% |
| !! | CTCATGGACTATGAAGATTT+TGG | + | chr3.2:86693307-86693326 | MS.gene014978:CDS | 35.0% |
| !! | GAGATTTTGGGGGTTTATTT+GGG | - | chr3.2:86692269-86692288 | None:intergenic | 35.0% |
| !! | TCTCATTGGAGCATTTTTGT+GGG | + | chr3.2:86693025-86693044 | MS.gene014978:CDS | 35.0% |
| !! | TTCTCATTGGAGCATTTTTG+TGG | + | chr3.2:86693024-86693043 | MS.gene014978:CDS | 35.0% |
| !!! | AAGGTGCTTTATTTTGTCCA+TGG | + | chr3.2:86692864-86692883 | MS.gene014978:CDS | 35.0% |
| !!! | AGGTGCTTTATTTTGTCCAT+GGG | + | chr3.2:86692865-86692884 | MS.gene014978:CDS | 35.0% |
| !!! | GTATTGGCCATTTTAGTTTC+AGG | + | chr3.2:86693204-86693223 | MS.gene014978:CDS | 35.0% |
| !!! | GTTTGTTTTTGTGTGCATTG+CGG | + | chr3.2:86692668-86692687 | MS.gene014978:CDS | 35.0% |
| !!! | TAATTTTGGCTTGGTAGTGA+AGG | + | chr3.2:86694723-86694742 | MS.gene014978:CDS | 35.0% |
| !!! | TTTGTTTTTGTGTGCATTGC+GGG | + | chr3.2:86692669-86692688 | MS.gene014978:CDS | 35.0% |
| AAAGTCTTTAGCAGATTGGG+TGG | + | chr3.2:86693908-86693927 | MS.gene014978:CDS | 40.0% | |
| AAATACACATAGGCCATGGT+TGG | - | chr3.2:86693723-86693742 | None:intergenic | 40.0% | |
| AAGCCCAAATATGGTTGACA+AGG | + | chr3.2:86694499-86694518 | MS.gene014978:CDS | 40.0% | |
| ACTCCGTCGTTTCATGATTA+AGG | + | chr3.2:86693827-86693846 | MS.gene014978:CDS | 40.0% | |
| AGCAAGAGAAAGTTTCCTCA+TGG | + | chr3.2:86693291-86693310 | MS.gene014978:CDS | 40.0% | |
| AGTAGTGTGGCTTCTTCTAA+TGG | + | chr3.2:86694128-86694147 | MS.gene014978:CDS | 40.0% | |
| ATGTTCTACAGACTCTCTCT+GGG | + | chr3.2:86693138-86693157 | MS.gene014978:CDS | 40.0% | |
| ATTGAACAAGCTTGTGACAG+GGG | + | chr3.2:86694086-86694105 | MS.gene014978:CDS | 40.0% | |
| CAATTGAACAAGCTTGTGAC+AGG | + | chr3.2:86694084-86694103 | MS.gene014978:CDS | 40.0% | |
| CAGATACCAAAACAAGGAGA+AGG | - | chr3.2:86693748-86693767 | None:intergenic | 40.0% | |
| CCAATCTGCTAAAGACTTTC+TGG | - | chr3.2:86693907-86693926 | None:intergenic | 40.0% | |
| CCAGAAAGTCTTTAGCAGAT+TGG | + | chr3.2:86693904-86693923 | MS.gene014978:CDS | 40.0% | |
| GAGTGACAGATACCAAAACA+AGG | - | chr3.2:86693754-86693773 | None:intergenic | 40.0% | |
| GCGAAAGAGACTAACAACAA+AGG | + | chr3.2:86692632-86692651 | MS.gene014978:CDS | 40.0% | |
| GGAGAAGGGAAAATACACAT+AGG | - | chr3.2:86693733-86693752 | None:intergenic | 40.0% | |
| GTAATGCATCCGTTTGATGT+TGG | + | chr3.2:86694261-86694280 | MS.gene014978:CDS | 40.0% | |
| GTGGCATGTTAGTTACCAAA+TGG | + | chr3.2:86692790-86692809 | MS.gene014978:CDS | 40.0% | |
| TAGAAGAAGCCACACTACTA+TGG | - | chr3.2:86694127-86694146 | None:intergenic | 40.0% | |
| TATGTTCTACAGACTCTCTC+TGG | + | chr3.2:86693137-86693156 | MS.gene014978:CDS | 40.0% | |
| TCCTTTGGTATTTCCCCTAT+TGG | + | chr3.2:86693857-86693876 | MS.gene014978:CDS | 40.0% | |
| TGGAGAGGAATCCACAATAT+TGG | + | chr3.2:86694695-86694714 | MS.gene014978:CDS | 40.0% | |
| TTATTCTTACTGGCAGCTAG+GGG | - | chr3.2:86693486-86693505 | None:intergenic | 40.0% | |
| TTTCTTTGTGCCGCCATTAA+CGG | - | chr3.2:86693237-86693256 | None:intergenic | 40.0% | |
| ! | ACTCTTGTTTCCCTTCTCAT+TGG | + | chr3.2:86693011-86693030 | MS.gene014978:CDS | 40.0% |
| ! | AGGGATGAACCTTATTTCAG+GGG | - | chr3.2:86692244-86692263 | None:intergenic | 40.0% |
| ! | ATTTGCAGCAGGAGATTTTG+GGG | - | chr3.2:86692280-86692299 | None:intergenic | 40.0% |
| ! | CAGCTGCCTATTACATTTTC+AGG | + | chr3.2:86693447-86693466 | MS.gene014978:CDS | 40.0% |
| ! | CATTTGCAGCAGGAGATTTT+GGG | - | chr3.2:86692281-86692300 | None:intergenic | 40.0% |
| ! | CTAGGGATGAACCTTATTTC+AGG | - | chr3.2:86692246-86692265 | None:intergenic | 40.0% |
| ! | GGGTGCTTTTAATCAATCGT+GGG | + | chr3.2:86692940-86692959 | MS.gene014978:CDS | 40.0% |
| ! | GGTGCTTTTAATCAATCGTG+GGG | + | chr3.2:86692941-86692960 | MS.gene014978:CDS | 40.0% |
| ! | GTAAGTTTTGCATTTGCAGC+AGG | - | chr3.2:86692291-86692310 | None:intergenic | 40.0% |
| ! | GTGTGTTATAGATGGTGTTG+AGG | + | chr3.2:86694290-86694309 | MS.gene014978:CDS | 40.0% |
| ! | TGGGTGCTTTTAATCAATCG+TGG | + | chr3.2:86692939-86692958 | MS.gene014978:CDS | 40.0% |
| ! | TTTGGAGTTTAAGGCTTTGG+AGG | + | chr3.2:86692739-86692758 | MS.gene014978:CDS | 40.0% |
| !! | ACCGTTCCAGACTTGTTATT+CGG | - | chr3.2:86692489-86692508 | None:intergenic | 40.0% |
| !! | AGCTTTGGAGTTTAAGGCTT+TGG | + | chr3.2:86692736-86692755 | MS.gene014978:CDS | 40.0% |
| !! | GAGGTATTGTATGCTTGTGA+TGG | + | chr3.2:86692758-86692777 | MS.gene014978:CDS | 40.0% |
| !! | GGAGATTTTGGGGGTTTATT+TGG | - | chr3.2:86692270-86692289 | None:intergenic | 40.0% |
| !! | TGATTAAAAGCACCCATGTG+AGG | - | chr3.2:86692935-86692954 | None:intergenic | 40.0% |
| !! | TTCAGGAGTACTACCGTTAA+TGG | + | chr3.2:86693221-86693240 | MS.gene014978:CDS | 40.0% |
| !!! | TTGGCATCCTAATTTTGGCT+TGG | + | chr3.2:86694714-86694733 | MS.gene014978:CDS | 40.0% |
| AACTGAGAAGGACAGAGCTT+TGG | + | chr3.2:86692721-86692740 | MS.gene014978:CDS | 45.0% | |
| ACGACACCAGCAGAGAAAAT+TGG | + | chr3.2:86694542-86694561 | MS.gene014978:CDS | 45.0% | |
| ACTGTGCTTCCCCTGAAATA+AGG | + | chr3.2:86692232-86692251 | MS.gene014978:CDS | 45.0% | |
| AGATACAGCCTTCTTCCACA+AGG | + | chr3.2:86694883-86694902 | MS.gene014978:CDS | 45.0% | |
| AGGTGTTCATCTCAGACACA+TGG | + | chr3.2:86694903-86694922 | MS.gene014978:CDS | 45.0% | |
| AGTTTGGAGAGAAGACCAAG+CGG | + | chr3.2:86694809-86694828 | MS.gene014978:CDS | 45.0% | |
| ATCCGTTTGATGTTGGCGAT+CGG | + | chr3.2:86694268-86694287 | MS.gene014978:CDS | 45.0% | |
| ATCGGTGGAACTCCAAGTAT+TGG | + | chr3.2:86693188-86693207 | MS.gene014978:CDS | 45.0% | |
| ATGGAAGAGGCTGAGAAGAT+CGG | + | chr3.2:86693170-86693189 | MS.gene014978:CDS | 45.0% | |
| CAAAATCTTTGCGGCCAGTT+TGG | - | chr3.2:86692976-86692995 | None:intergenic | 45.0% | |
| CACTCCTAGAACACCTTTGA+TGG | + | chr3.2:86692539-86692558 | MS.gene014978:CDS | 45.0% | |
| CATGATCATGATCTTGGCCA+TGG | - | chr3.2:86692158-86692177 | None:intergenic | 45.0% | |
| CATTCGCCGAATAACAAGTC+TGG | + | chr3.2:86692480-86692499 | MS.gene014978:CDS | 45.0% | |
| CGACACCAGCAGAGAAAATT+GGG | + | chr3.2:86694543-86694562 | MS.gene014978:CDS | 45.0% | |
| CTACTATGGTCACCACTACT+AGG | - | chr3.2:86694113-86694132 | None:intergenic | 45.0% | |
| CTTTAGCAGATTGGGTGGTA+AGG | + | chr3.2:86693913-86693932 | MS.gene014978:intron | 45.0% | |
| GACACCAGCAGAGAAAATTG+GGG | + | chr3.2:86694544-86694563 | MS.gene014978:CDS | 45.0% | |
| GATGAACACCTTGTGGAAGA+AGG | - | chr3.2:86694894-86694913 | None:intergenic | 45.0% | |
| GATGGAGAACAGAAGAGAAG+TGG | + | chr3.2:86692104-86692123 | MS.gene014978:CDS | 45.0% | |
| GCCAATAGGGGAAATACCAA+AGG | - | chr3.2:86693861-86693880 | None:intergenic | 45.0% | |
| GCCGAATAACAAGTCTGGAA+CGG | + | chr3.2:86692485-86692504 | MS.gene014978:CDS | 45.0% | |
| GGGAAAATACACATAGGCCA+TGG | - | chr3.2:86693727-86693746 | None:intergenic | 45.0% | |
| GGTTGACAAGGTAGAGTTCT+CGG | + | chr3.2:86694511-86694530 | MS.gene014978:CDS | 45.0% | |
| TACTCGCGGCTTTCATGTTT+GGG | + | chr3.2:86694196-86694215 | MS.gene014978:CDS | 45.0% | |
| TAGTGGTGACCATAGTAGTG+TGG | + | chr3.2:86694115-86694134 | MS.gene014978:CDS | 45.0% | |
| TATTGGCACAGTCAGAGACA+GGG | + | chr3.2:86693874-86693893 | MS.gene014978:CDS | 45.0% | |
| TCAAATGTGAGTGGAGACCA+TGG | + | chr3.2:86692138-86692157 | MS.gene014978:CDS | 45.0% | |
| TCTCTTTCGCTTGCCTATAC+TGG | - | chr3.2:86692622-86692641 | None:intergenic | 45.0% | |
| TGTCTCTGACTGTGCCAATA+GGG | - | chr3.2:86693874-86693893 | None:intergenic | 45.0% | |
| TTCTCAGCCTCTTCCATAAG+TGG | - | chr3.2:86693167-86693186 | None:intergenic | 45.0% | |
| TTGGGGGTTTATTTGGGCTA+GGG | - | chr3.2:86692263-86692282 | None:intergenic | 45.0% | |
| TTTGGGGGTTTATTTGGGCT+AGG | - | chr3.2:86692264-86692283 | None:intergenic | 45.0% | |
| ! | ACAAGTCTGGAACGGTGAAT+CGG | + | chr3.2:86692493-86692512 | MS.gene014978:CDS | 45.0% |
| ! | GACGACGTTGCTAAAGGTTT+TGG | + | chr3.2:86693055-86693074 | MS.gene014978:CDS | 45.0% |
| ! | GCATTTGCAGCAGGAGATTT+TGG | - | chr3.2:86692282-86692301 | None:intergenic | 45.0% |
| ! | TCAGGGGAAGCACAGTTTAA+AGG | - | chr3.2:86692228-86692247 | None:intergenic | 45.0% |
| ! | TGTCTGAGATGAACACCTTG+TGG | - | chr3.2:86694901-86694920 | None:intergenic | 45.0% |
| ! | TTTGCAGCAGGAGATTTTGG+GGG | - | chr3.2:86692279-86692298 | None:intergenic | 45.0% |
| !! | AGGAGTACTACCGTTAATGG+CGG | + | chr3.2:86693224-86693243 | MS.gene014978:CDS | 45.0% |
| !! | CAGTTTGGTTCTCCTCACAT+GGG | + | chr3.2:86692920-86692939 | MS.gene014978:CDS | 45.0% |
| !! | GATGCCATCAAAGGTGTTCT+AGG | - | chr3.2:86692546-86692565 | None:intergenic | 45.0% |
| !! | GGACAGAGCTTTGGAGTTTA+AGG | + | chr3.2:86692730-86692749 | MS.gene014978:CDS | 45.0% |
| !! | TCAGTTTGGTTCTCCTCACA+TGG | + | chr3.2:86692919-86692938 | MS.gene014978:CDS | 45.0% |
| CACCGATCGCCAACATCAAA+CGG | - | chr3.2:86694273-86694292 | None:intergenic | 50.0% | |
| CTATTGGCACAGTCAGAGAC+AGG | + | chr3.2:86693873-86693892 | MS.gene014978:CDS | 50.0% | |
| CTGTCTCTGACTGTGCCAAT+AGG | - | chr3.2:86693875-86693894 | None:intergenic | 50.0% | |
| GGACACATTGCTTCAACCCA+TGG | - | chr3.2:86692884-86692903 | None:intergenic | 50.0% | |
| GGCGATCGGTGTGTTATAGA+TGG | + | chr3.2:86694282-86694301 | MS.gene014978:CDS | 50.0% | |
| GTACTCGCGGCTTTCATGTT+TGG | + | chr3.2:86694195-86694214 | MS.gene014978:CDS | 50.0% | |
| GTCTCTGACTGTGCCAATAG+GGG | - | chr3.2:86693873-86693892 | None:intergenic | 50.0% | |
| TCAGCCTCTTCCATAAGTGG+AGG | - | chr3.2:86693164-86693183 | None:intergenic | 50.0% | |
| TGCTGATAGGTTTAGTGGCG+AGG | - | chr3.2:86694469-86694488 | None:intergenic | 50.0% | |
| TTAGTGGCGAGGACAGAGTT+TGG | - | chr3.2:86694458-86694477 | None:intergenic | 50.0% | |
| ! | ACACCTTTGATGGCATCTCC+AGG | + | chr3.2:86692549-86692568 | MS.gene014978:CDS | 50.0% |
| ! | AGTGCCCCAATTTTCTCTGC+TGG | - | chr3.2:86694551-86694570 | None:intergenic | 50.0% |
| ! | GGGGAAGCACAGTTTAAAGG+TGG | - | chr3.2:86692225-86692244 | None:intergenic | 50.0% |
| ! | TGGGTTGAAGCAATGTGTCC+AGG | + | chr3.2:86692884-86692903 | MS.gene014978:CDS | 50.0% |
| CACCAGTTCACTTCTCCGCT+TGG | - | chr3.2:86694827-86694846 | None:intergenic | 55.0% | |
| CGAGTACTAGCTGCGATGAG+AGG | - | chr3.2:86694182-86694201 | None:intergenic | 55.0% | |
| CTCATCGCAGCTAGTACTCG+CGG | + | chr3.2:86694182-86694201 | MS.gene014978:CDS | 55.0% | |
| GAAGAGGCTGAGAAGATCGG+TGG | + | chr3.2:86693173-86693192 | MS.gene014978:CDS | 55.0% | |
| GACCAAGCGGAGAAGTGAAC+TGG | + | chr3.2:86694822-86694841 | MS.gene014978:CDS | 55.0% | |
| GCGGAGAAGTGAACTGGTGA+TGG | + | chr3.2:86694828-86694847 | MS.gene014978:CDS | 55.0% | |
| GGACCTGGAGATGCCATCAA+AGG | - | chr3.2:86692555-86692574 | None:intergenic | 55.0% | |
| GGCGACTTTGTAGAGTAGCG+AGG | - | chr3.2:86692204-86692223 | None:intergenic | 55.0% | |
| TCATCAAGATCCTCCCCAGC+AGG | - | chr3.2:86692576-86692595 | None:intergenic | 55.0% | |
| TCTCTCTGGGCCTCCACTTA+TGG | + | chr3.2:86693151-86693170 | MS.gene014978:CDS | 55.0% | |
| TGCGGCCAGTTTGGATCGAT+GGG | - | chr3.2:86692967-86692986 | None:intergenic | 55.0% | |
| TGGGCCTCCACTTATGGAAG+AGG | + | chr3.2:86693157-86693176 | MS.gene014978:CDS | 55.0% | |
| TGTGACAGGGGTCCTAGTAG+TGG | + | chr3.2:86694098-86694117 | MS.gene014978:CDS | 55.0% | |
| TTGCGGCCAGTTTGGATCGA+TGG | - | chr3.2:86692968-86692987 | None:intergenic | 55.0% | |
| ! | GTGCATTGCGGGTAGCTTGT+TGG | + | chr3.2:86692680-86692699 | MS.gene014978:CDS | 55.0% |
| ATGGCATCTCCAGGTCCTGC+TGG | + | chr3.2:86692558-86692577 | MS.gene014978:CDS | 60.0% | |
| TGGCATCTCCAGGTCCTGCT+GGG | + | chr3.2:86692559-86692578 | MS.gene014978:CDS | 60.0% | |
| TGGGGCCCATCGATCCAAAC+TGG | + | chr3.2:86692959-86692978 | MS.gene014978:CDS | 60.0% | |
| AGATCCTCCCCAGCAGGACC+TGG | - | chr3.2:86692570-86692589 | None:intergenic | 65.0% | |
| ATCTCCAGGTCCTGCTGGGG+AGG | + | chr3.2:86692563-86692582 | MS.gene014978:CDS | 65.0% | |
| GGCATCTCCAGGTCCTGCTG+GGG | + | chr3.2:86692560-86692579 | MS.gene014978:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 86692102 | 86694951 | 86692102 | ID=MS.gene014978 |
| chr3.2 | mRNA | 86692102 | 86694951 | 86692102 | ID=MS.gene014978.t1;Parent=MS.gene014978 |
| chr3.2 | exon | 86692102 | 86693495 | 86692102 | ID=MS.gene014978.t1.exon1;Parent=MS.gene014978.t1 |
| chr3.2 | CDS | 86692102 | 86693495 | 86692102 | ID=cds.MS.gene014978.t1;Parent=MS.gene014978.t1 |
| chr3.2 | exon | 86693809 | 86693929 | 86693809 | ID=MS.gene014978.t1.exon2;Parent=MS.gene014978.t1 |
| chr3.2 | CDS | 86693809 | 86693929 | 86693809 | ID=cds.MS.gene014978.t1;Parent=MS.gene014978.t1 |
| chr3.2 | exon | 86694018 | 86694311 | 86694018 | ID=MS.gene014978.t1.exon3;Parent=MS.gene014978.t1 |
| chr3.2 | CDS | 86694018 | 86694311 | 86694018 | ID=cds.MS.gene014978.t1;Parent=MS.gene014978.t1 |
| chr3.2 | exon | 86694386 | 86694588 | 86694386 | ID=MS.gene014978.t1.exon4;Parent=MS.gene014978.t1 |
| chr3.2 | CDS | 86694386 | 86694588 | 86694386 | ID=cds.MS.gene014978.t1;Parent=MS.gene014978.t1 |
| chr3.2 | exon | 86694690 | 86694951 | 86694690 | ID=MS.gene014978.t1.exon5;Parent=MS.gene014978.t1 |
| chr3.2 | CDS | 86694690 | 86694951 | 86694690 | ID=cds.MS.gene014978.t1;Parent=MS.gene014978.t1 |
| Gene Sequence |
| Protein sequence |
