Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32764.t1 | XP_024633438.1 | 98.4 | 733 | 11 | 1 | 37 | 768 | 39 | 771 | 0.00E+00 | 1383.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32764.t1 | Q9LYG9 | 56.3 | 712 | 292 | 9 | 50 | 757 | 34 | 730 | 2.7e-207 | 723.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32764.t1 | G7J8E6 | 98.4 | 733 | 11 | 1 | 37 | 768 | 39 | 771 | 0.0e+00 | 1383.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053097 | MS.gene32764 | 0.80792 | 3.99E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene32764 | MS.gene014978 | PPI |
| MS.gene32764 | MS.gene42688 | PPI |
| MS.gene32764 | MS.gene74110 | PPI |
| MS.gene32770 | MS.gene32764 | PPI |
| MS.gene32764 | MS.gene014973 | PPI |
| MS.gene32764 | MS.gene97525 | PPI |
| MS.gene32764 | MS.gene42620 | PPI |
| MS.gene32773 | MS.gene32764 | PPI |
| MS.gene32764 | MS.gene062410 | PPI |
| MS.gene32764 | MS.gene014981 | PPI |
| MS.gene32764 | MS.gene42628 | PPI |
| MS.gene32764 | MS.gene42686 | PPI |
| MS.gene42681 | MS.gene32764 | PPI |
| MS.gene32764 | MS.gene42622 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32764.t1 | MTR_3g104990 | 98.054 | 771 | 12 | 2 | 1 | 768 | 1 | 771 | 0.0 | 1550 |
| MS.gene32764.t1 | MTR_3g104940 | 86.176 | 774 | 99 | 4 | 1 | 768 | 1 | 772 | 0.0 | 1300 |
| MS.gene32764.t1 | MTR_3g104920 | 80.415 | 771 | 126 | 6 | 1 | 768 | 1 | 749 | 0.0 | 1225 |
| MS.gene32764.t1 | MTR_3g104920 | 80.449 | 757 | 125 | 5 | 15 | 768 | 1 | 737 | 0.0 | 1204 |
| MS.gene32764.t1 | MTR_2g041220 | 51.053 | 760 | 322 | 15 | 19 | 757 | 15 | 745 | 0.0 | 702 |
| MS.gene32764.t1 | MTR_8g071250 | 46.528 | 576 | 285 | 10 | 195 | 760 | 129 | 691 | 1.37e-164 | 492 |
| MS.gene32764.t1 | MTR_1g113850 | 40.117 | 683 | 341 | 11 | 137 | 767 | 251 | 917 | 2.15e-158 | 484 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32764.t1 | AT5G12080 | 58.485 | 713 | 277 | 9 | 49 | 757 | 33 | 730 | 0.0 | 827 |
| MS.gene32764.t1 | AT5G12080 | 58.485 | 713 | 277 | 9 | 49 | 757 | 33 | 730 | 0.0 | 827 |
| MS.gene32764.t1 | AT5G12080 | 58.485 | 713 | 277 | 9 | 49 | 757 | 33 | 730 | 0.0 | 827 |
| MS.gene32764.t1 | AT5G19520 | 52.983 | 704 | 312 | 6 | 58 | 757 | 50 | 738 | 0.0 | 745 |
| MS.gene32764.t1 | AT5G19520 | 52.983 | 704 | 312 | 6 | 58 | 757 | 50 | 738 | 0.0 | 745 |
| MS.gene32764.t1 | AT2G17010 | 41.556 | 604 | 317 | 5 | 188 | 760 | 292 | 890 | 4.30e-158 | 482 |
| MS.gene32764.t1 | AT1G53470 | 39.625 | 694 | 357 | 12 | 115 | 760 | 181 | 860 | 1.33e-155 | 475 |
| MS.gene32764.t1 | AT3G14810 | 42.197 | 692 | 344 | 15 | 115 | 765 | 188 | 864 | 5.38e-155 | 473 |
| MS.gene32764.t1 | AT1G78610 | 42.296 | 636 | 325 | 8 | 166 | 767 | 211 | 838 | 1.21e-153 | 469 |
| MS.gene32764.t1 | AT2G17000 | 41.408 | 611 | 317 | 9 | 182 | 760 | 222 | 823 | 4.14e-144 | 444 |
| MS.gene32764.t1 | AT2G17000 | 41.408 | 611 | 317 | 9 | 182 | 760 | 222 | 823 | 5.32e-144 | 444 |
| MS.gene32764.t1 | AT3G14810 | 39.623 | 689 | 325 | 16 | 115 | 762 | 188 | 826 | 9.54e-135 | 420 |
| MS.gene32764.t1 | AT2G17010 | 35.833 | 360 | 195 | 5 | 188 | 516 | 292 | 646 | 2.32e-64 | 227 |
Find 152 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAATGAACTTTCAAGAATT+TGG | 0.059991 | 3.1:-82952871 | MS.gene32764:CDS |
| GACATTGTTGCTAAAGATTT+TGG | 0.123829 | 3.1:-82954672 | MS.gene32764:CDS |
| TTTCTTTGTGCTACCTTTAC+TGG | 0.130051 | 3.1:+82954493 | None:intergenic |
| TAAATTGGCCACGAAGATTT+TGG | 0.178672 | 3.1:-82954753 | MS.gene32764:CDS |
| TCTACACTGTCACCCATATT+AGG | 0.187404 | 3.1:+82953200 | None:intergenic |
| TCATTTGTAGCAGGAGCTTT+TGG | 0.190150 | 3.1:+82955430 | None:intergenic |
| TTGTACTCCTGAAACTAAAA+TGG | 0.194746 | 3.1:+82954516 | None:intergenic |
| CAATGAACTTTCAAGAATTT+GGG | 0.230393 | 3.1:-82952870 | MS.gene32764:CDS |
| AGATTTGGAGTTTGGGGCTT+TGG | 0.250678 | 3.1:-82954991 | MS.gene32764:CDS |
| AAGTAACATTCTCTTCTAAA+AGG | 0.256225 | 3.1:+82955317 | None:intergenic |
| TTCATGGACTATGAAGATTT+TGG | 0.258155 | 3.1:-82954420 | MS.gene32764:CDS |
| ACTCCGTAGGTTCTTGATTA+AGG | 0.262247 | 3.1:-82953884 | MS.gene32764:CDS |
| CTAGGGACGAACCTTATTTC+AGG | 0.272178 | 3.1:+82955466 | None:intergenic |
| TCAGGGGAAGCACAGTTTAA+AGG | 0.276027 | 3.1:+82955484 | None:intergenic |
| AAGGACGGAGATTTGGAGTT+TGG | 0.278610 | 3.1:-82954999 | MS.gene32764:CDS |
| GTACTTGCTGCTTTCATGTT+TGG | 0.284157 | 3.1:-82953507 | MS.gene32764:CDS |
| TTATTACAGAAGCCCTAATA+TGG | 0.287671 | 3.1:-82953213 | MS.gene32764:CDS |
| TTGTTCACCAAATCTTGATT+TGG | 0.289978 | 3.1:+82955360 | None:intergenic |
| ACTGTTCCGGGTTTATTATT+CGG | 0.295778 | 3.1:+82955241 | None:intergenic |
| TATGTTCTGCAGACTCTCTC+TGG | 0.301029 | 3.1:-82954590 | MS.gene32764:CDS |
| AACAGTTCTATAAACTGTTC+CGG | 0.312967 | 3.1:+82955228 | None:intergenic |
| TTCTCAGCCTCTTCCATTAG+TGG | 0.319988 | 3.1:+82954563 | None:intergenic |
| TGGAGTCGAACGATCTAAAT+TGG | 0.321444 | 3.1:-82954768 | MS.gene32764:CDS |
| TAACAGTTGAGGAACTAAAA+AGG | 0.321821 | 3.1:-82955018 | MS.gene32764:CDS |
| GATGAACACCTTGCGGAATA+AGG | 0.326639 | 3.1:+82952773 | None:intergenic |
| TCTAAAAGGATTCCATCAAT+AGG | 0.336245 | 3.1:+82955331 | None:intergenic |
| GGTGAACGTGGTGCTTTATA+TGG | 0.336535 | 3.1:+82955262 | None:intergenic |
| ACTGTGCTTCCCCTGAAATA+AGG | 0.336839 | 3.1:-82955477 | MS.gene32764:CDS |
| CTACTGGCACAGGCAGAAAC+AGG | 0.337087 | 3.1:-82953838 | MS.gene32764:CDS |
| TCTCTCTGGGCCTCCACTAA+TGG | 0.337430 | 3.1:-82954576 | MS.gene32764:CDS |
| CACTCCTAGAACACCTTTGA+TGG | 0.340051 | 3.1:-82955188 | MS.gene32764:CDS |
| TTTATGGCTAGGACAGAGTT+TGG | 0.349369 | 3.1:+82953248 | None:intergenic |
| CAGAAAATCTTTAGCAGCTT+GGG | 0.350080 | 3.1:-82953806 | MS.gene32764:CDS |
| AGGACGGAGATTTGGAGTTT+GGG | 0.350085 | 3.1:-82954998 | MS.gene32764:CDS |
| TGTTCACCAAATCTTGATTT+GGG | 0.359204 | 3.1:+82955361 | None:intergenic |
| TTTGGAGTTTGGGGCTTTGG+AGG | 0.367529 | 3.1:-82954988 | MS.gene32764:CDS |
| TCTAAGCCCAAATCAAGATT+TGG | 0.368072 | 3.1:-82955367 | MS.gene32764:CDS |
| AGCAAGAGAAAGTTTCTTCA+TGG | 0.373517 | 3.1:-82954436 | MS.gene32764:CDS |
| TCCTTTGGTATTTCCCCTAC+TGG | 0.375771 | 3.1:-82953854 | MS.gene32764:CDS |
| AAAGAAAGAGGTTATTGATA+TGG | 0.383412 | 3.1:-82954477 | MS.gene32764:CDS |
| AACATTCCTGAAAACGTAAT+AGG | 0.384096 | 3.1:+82954274 | None:intergenic |
| AGTAGTGTGGCTTCTTCTAA+TGG | 0.385108 | 3.1:-82953574 | MS.gene32764:CDS |
| GATGCCATCAAAGGTGTTCT+AGG | 0.387245 | 3.1:+82955184 | None:intergenic |
| TCAACTCATGATCATGATCT+TGG | 0.387525 | 3.1:+82955548 | None:intergenic |
| GGAGTTTGGGGCTTTGGAGG+TGG | 0.388035 | 3.1:-82954985 | MS.gene32764:CDS |
| CTACACTGTCACCCATATTA+GGG | 0.388576 | 3.1:+82953201 | None:intergenic |
| ACAGTTCTATAAACTGTTCC+GGG | 0.389897 | 3.1:+82955229 | None:intergenic |
| CACTTAAGATAACTTGAATC+AGG | 0.390741 | 3.1:+82952736 | None:intergenic |
| TTCTTGTATATGATTTCATC+AGG | 0.393170 | 3.1:+82955139 | None:intergenic |
| ACTCTTGTTTCCCTTCTCAT+TGG | 0.393699 | 3.1:-82954716 | MS.gene32764:CDS |
| CAATTAAACAAGCTAGTTAC+AGG | 0.398707 | 3.1:-82953618 | MS.gene32764:CDS |
| CCAGAAAATCTTTAGCAGCT+TGG | 0.399961 | 3.1:-82953807 | MS.gene32764:CDS |
| CACTAATTCACTTCTCCGCT+TGG | 0.404975 | 3.1:+82952840 | None:intergenic |
| CTGGCATCCTAGTTTCAGTT+TGG | 0.410393 | 3.1:-82952950 | MS.gene32764:CDS |
| GATTAAGGAAGAAGTTCCTT+TGG | 0.415393 | 3.1:-82953869 | MS.gene32764:CDS |
| CTACTATGGTCACCACTACT+AGG | 0.415578 | 3.1:+82953592 | None:intergenic |
| CTGTTTCTGCCTGTGCCAGT+AGG | 0.426864 | 3.1:+82953839 | None:intergenic |
| CATCGATCGCCAACATCAAA+TGG | 0.429406 | 3.1:+82953432 | None:intergenic |
| GACAATGTGCGTGAACCATT+TGG | 0.437003 | 3.1:+82954922 | None:intergenic |
| TGGAGAGGAATCCACAATAC+TGG | 0.438670 | 3.1:-82952969 | MS.gene32764:CDS |
| AGCAGTTGCTTCCATCTCAT+TGG | 0.438791 | 3.1:+82954301 | None:intergenic |
| GAGTCTGCAGAACATATTGA+TGG | 0.441671 | 3.1:+82954597 | None:intergenic |
| TGTTTCTGCCTGTGCCAGTA+GGG | 0.443402 | 3.1:+82953840 | None:intergenic |
| GAACAACCTTACCCTATTGA+TGG | 0.443872 | 3.1:-82955343 | MS.gene32764:CDS |
| TATATTCTTACTTGCAGCTA+GGG | 0.445433 | 3.1:+82954243 | None:intergenic |
| CTTGAAACTTAATAATGAAA+AGG | 0.452787 | 3.1:-82953279 | MS.gene32764:CDS |
| CTAAAAGGATTCCATCAATA+GGG | 0.453814 | 3.1:+82955332 | None:intergenic |
| ACGACGTCAGCAGAGAAAAT+CGG | 0.461578 | 3.1:-82953161 | MS.gene32764:CDS |
| TAGAAGAAGCCACACTACTA+TGG | 0.462238 | 3.1:+82953578 | None:intergenic |
| GTGCATCACGGGTAGCTTGT+TGG | 0.471724 | 3.1:-82955047 | MS.gene32764:CDS |
| ATCTAGAGAATTAGAGATTG+TGG | 0.475217 | 3.1:+82954370 | None:intergenic |
| TCGCTTTGGTTCTACTCACA+TGG | 0.480459 | 3.1:-82954808 | MS.gene32764:CDS |
| GGTATTTCCCCTACTGGCAC+AGG | 0.484922 | 3.1:-82953848 | MS.gene32764:CDS |
| TGTACTCCTGAAACTAAAAT+GGG | 0.489996 | 3.1:+82954517 | None:intergenic |
| GGATCCTCACCAGCTGGACC+TGG | 0.490344 | 3.1:+82955160 | None:intergenic |
| GTGGCATGTTAGTTACCAAA+TGG | 0.493145 | 3.1:-82954937 | MS.gene32764:CDS |
| AAGAAAGTTGAATTTAGTAA+AGG | 0.494912 | 3.1:-82955121 | MS.gene32764:CDS |
| AAATGTAAATAAGATTAAGA+TGG | 0.497083 | 3.1:-82952911 | MS.gene32764:CDS |
| ATCTCCAGGTCCAGCTGGTG+AGG | 0.497675 | 3.1:-82955164 | MS.gene32764:CDS |
| AATGTAAATAAGATTAAGAT+GGG | 0.505449 | 3.1:-82952910 | MS.gene32764:CDS |
| TAGTTTCAGTTTGGCAGTGA+AGG | 0.512844 | 3.1:-82952941 | MS.gene32764:CDS |
| TTTGTGTTTGTGTGCATCAC+GGG | 0.513377 | 3.1:-82955058 | MS.gene32764:CDS |
| CGCTTTGGTTCTACTCACAT+GGG | 0.514104 | 3.1:-82954807 | MS.gene32764:CDS |
| TGGACTGAAGAAATGTATCC+AGG | 0.514151 | 3.1:-82954843 | MS.gene32764:CDS |
| ATGGCATCTCCAGGTCCAGC+TGG | 0.514371 | 3.1:-82955169 | MS.gene32764:CDS |
| TTCAGGAGTACAACCAGTAA+AGG | 0.520751 | 3.1:-82954506 | MS.gene32764:CDS |
| ATATATTCTTACTTGCAGCT+AGG | 0.525421 | 3.1:+82954242 | None:intergenic |
| ATGTTCTGCAGACTCTCTCT+GGG | 0.525655 | 3.1:-82954589 | MS.gene32764:CDS |
| TCATCAGGATCCTCACCAGC+TGG | 0.532211 | 3.1:+82955154 | None:intergenic |
| GTTGGCTAGTTTAACAGTTG+AGG | 0.533975 | 3.1:-82955029 | MS.gene32764:CDS |
| CATTACAAACACGAAGATGA+TGG | 0.535612 | 3.1:+82953458 | None:intergenic |
| ACACCTTTGATGGCATCTCC+AGG | 0.537728 | 3.1:-82955178 | MS.gene32764:CDS |
| GGATACATTTCTTCAGTCCA+TGG | 0.539549 | 3.1:+82954846 | None:intergenic |
| TAGGGACGAACCTTATTTCA+GGG | 0.539725 | 3.1:+82955467 | None:intergenic |
| GGACGGAGATTTGGAGTTTG+GGG | 0.539859 | 3.1:-82954997 | MS.gene32764:CDS |
| TACACCATCCAAAATCTTCG+TGG | 0.540293 | 3.1:+82954745 | None:intergenic |
| TATTACAGAAGCCCTAATAT+GGG | 0.542039 | 3.1:-82953212 | MS.gene32764:CDS |
| AGGATTCCATCAATAGGGTA+AGG | 0.542280 | 3.1:+82955337 | None:intergenic |
| TAAAGGTAGCACAAAGAAAG+AGG | 0.543539 | 3.1:-82954489 | MS.gene32764:CDS |
| GAGGTGGTGTATGCTTGTGA+TGG | 0.544535 | 3.1:-82954969 | MS.gene32764:CDS |
| GGTAATAATAATAAGCATCA+AGG | 0.546427 | 3.1:-82955652 | MS.gene32764:CDS |
| AAGCGATCCAAGTGAAAACC+TGG | 0.546867 | 3.1:+82954825 | None:intergenic |
| CATGATCTTGGCCATGGTGA+TGG | 0.547727 | 3.1:+82955560 | None:intergenic |
| TAAAGAAATTACCAATGAGA+TGG | 0.550653 | 3.1:-82954312 | MS.gene32764:CDS |
| CTTCTGTAATAATTGCTGAT+CGG | 0.555225 | 3.1:+82953224 | None:intergenic |
| TCAGCCTCTTCCATTAGTGG+AGG | 0.556564 | 3.1:+82954566 | None:intergenic |
| GTAATGCATCCATTTGATGT+TGG | 0.558028 | 3.1:-82953441 | MS.gene32764:CDS |
| AAACTAGGATGCCAGTATTG+TGG | 0.562729 | 3.1:+82952958 | None:intergenic |
| TGGGCCTCCACTAATGGAAG+AGG | 0.563345 | 3.1:-82954570 | MS.gene32764:CDS |
| GGTTTATTATTCGGTGAACG+TGG | 0.564860 | 3.1:+82955250 | None:intergenic |
| CTTCCTTAATCAAGAACCTA+CGG | 0.566575 | 3.1:+82953881 | None:intergenic |
| GTTTCTGCCTGTGCCAGTAG+GGG | 0.569425 | 3.1:+82953841 | None:intergenic |
| GTTTGTGTTTGTGTGCATCA+CGG | 0.570532 | 3.1:-82955059 | MS.gene32764:CDS |
| GCGTAAGAGACTAACGACTA+AGG | 0.572543 | 3.1:-82955095 | MS.gene32764:CDS |
| AAAATCTTTAGCAGCTTGGG+TGG | 0.582100 | 3.1:-82953803 | MS.gene32764:intron |
| TGCATAGGGTTGTGAATGGA+TGG | 0.590999 | 3.1:-82955673 | None:intergenic |
| GAAGAAAACAGAAGTGGTGG+TGG | 0.592280 | 3.1:-82955608 | MS.gene32764:CDS |
| AATAAATTAGGTATTTGGAG+AGG | 0.593844 | 3.1:-82952984 | MS.gene32764:intron |
| GCGGAGAAGTGAATTAGTGA+TGG | 0.596207 | 3.1:-82952836 | MS.gene32764:CDS |
| CAAGTACTAGCTGCGATGAG+AGG | 0.600062 | 3.1:+82953523 | None:intergenic |
| TTCACTGCCAAACTGAAACT+AGG | 0.601450 | 3.1:+82952943 | None:intergenic |
| GTGGTGGCAATTTCAAATGT+GGG | 0.602248 | 3.1:-82955592 | MS.gene32764:CDS |
| GGACCTGGAGATGCCATCAA+AGG | 0.602592 | 3.1:+82955175 | None:intergenic |
| GATCAAAGAAAGATTTGACA+TGG | 0.605754 | 3.1:+82954639 | None:intergenic |
| ATATTCTTACTTGCAGCTAG+GGG | 0.610117 | 3.1:+82954244 | None:intergenic |
| ATGGAAGAGGCTGAGAAAGT+CGG | 0.617688 | 3.1:-82954557 | MS.gene32764:CDS |
| CATGATCATGATCTTGGCCA+TGG | 0.624053 | 3.1:+82955554 | None:intergenic |
| GGTGGTGGCAATTTCAAATG+TGG | 0.624592 | 3.1:-82955593 | MS.gene32764:CDS |
| GTGGCAATTTCAAATGTGGG+TGG | 0.626198 | 3.1:-82955589 | MS.gene32764:CDS |
| AATGAACTTTCAAGAATTTG+GGG | 0.631242 | 3.1:-82952869 | MS.gene32764:CDS |
| AGGTGGTGAAGTGAGCATGA+TGG | 0.635799 | 3.1:-82955632 | MS.gene32764:CDS |
| GGGGAAGCACAGTTTAAAGG+TGG | 0.637546 | 3.1:+82955487 | None:intergenic |
| TACTGGCACAGGCAGAAACA+GGG | 0.640432 | 3.1:-82953837 | MS.gene32764:CDS |
| CGTTCACCGAATAATAAACC+CGG | 0.641887 | 3.1:-82955247 | MS.gene32764:CDS |
| GCCAGTAGGGGAAATACCAA+AGG | 0.642812 | 3.1:+82953853 | None:intergenic |
| AGATACTACCTTATTCCGCA+AGG | 0.644323 | 3.1:-82952781 | MS.gene32764:CDS |
| AGGTGTTCATCTCAGACACA+TGG | 0.650077 | 3.1:-82952761 | MS.gene32764:CDS |
| AGGGACGAACCTTATTTCAG+GGG | 0.654773 | 3.1:+82955468 | None:intergenic |
| AGTTACAGGAGTCCTAGTAG+TGG | 0.671864 | 3.1:-82953604 | MS.gene32764:CDS |
| AATAATAATAAGCATCAAGG+TGG | 0.672497 | 3.1:-82955649 | MS.gene32764:CDS |
| TCGACGAGGATGAACTCCGT+AGG | 0.674026 | 3.1:-82953897 | MS.gene32764:CDS |
| GATGGAGAAGAAAACAGAAG+TGG | 0.675509 | 3.1:-82955614 | MS.gene32764:CDS |
| CTTAAGCGACACTAAAACAG+CGG | 0.676974 | 3.1:-82953646 | MS.gene32764:CDS |
| TAGTGGTGACCATAGTAGTG+TGG | 0.677764 | 3.1:-82953587 | MS.gene32764:CDS |
| GGAGAAGAAAACAGAAGTGG+TGG | 0.683682 | 3.1:-82955611 | MS.gene32764:CDS |
| GAAGAGGCTGAGAAAGTCGG+CGG | 0.686077 | 3.1:-82954554 | MS.gene32764:CDS |
| AATTTGGGGAGAAGACCAAG+CGG | 0.720680 | 3.1:-82952855 | MS.gene32764:CDS |
| TGTCTGAGATGAACACCTTG+CGG | 0.733097 | 3.1:+82952766 | None:intergenic |
| TATGAATAGGGACATCGACG+AGG | 0.735291 | 3.1:-82953911 | MS.gene32764:intron |
| TAGATGCAGTGATGAACTCG+AGG | 0.741103 | 3.1:-82954397 | MS.gene32764:CDS |
| GGTGGAGATAGCCATCACCA+TGG | 0.745710 | 3.1:-82955571 | MS.gene32764:CDS |
| GGTGACTTTGTAGAGTAACG+AGG | 0.754563 | 3.1:+82955508 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTATTCTTTTAATAAATT+AGG | - | chr3.1:82955397-82955416 | MS.gene32764:CDS | 10.0% |
| !!! | TAACATTTCAAATATTTTTT+GGG | - | chr3.1:82955360-82955379 | MS.gene32764:CDS | 10.0% |
| !! | AAATGTAAATAAGATTAAGA+TGG | - | chr3.1:82955482-82955501 | MS.gene32764:CDS | 15.0% |
| !! | AATGTAAATAAGATTAAGAT+GGG | - | chr3.1:82955483-82955502 | MS.gene32764:CDS | 15.0% |
| !!! | CTAACATTTCAAATATTTTT+TGG | - | chr3.1:82955359-82955378 | MS.gene32764:CDS | 15.0% |
| !!! | CTTTTAATAAATTAGGTATT+TGG | - | chr3.1:82955404-82955423 | MS.gene32764:CDS | 15.0% |
| !! | AAGAAAGTTGAATTTAGTAA+AGG | - | chr3.1:82953272-82953291 | MS.gene32764:CDS | 20.0% |
| !! | CTTGAAACTTAATAATGAAA+AGG | - | chr3.1:82955114-82955133 | MS.gene32764:CDS | 20.0% |
| !! | TAAACAACTTAATTAAGTGT+TGG | + | chr3.1:82954385-82954404 | None:intergenic | 20.0% |
| !!! | ATAATTTTGAAGGCATTAAT+AGG | + | chr3.1:82955049-82955068 | None:intergenic | 20.0% |
| ! | AAAGAAAGAGGTTATTGATA+TGG | - | chr3.1:82953916-82953935 | MS.gene32764:intron | 25.0% |
| ! | AAGTAACATTCTCTTCTAAA+AGG | + | chr3.1:82953079-82953098 | None:intergenic | 25.0% |
| ! | AATAAATTAGGTATTTGGAG+AGG | - | chr3.1:82955409-82955428 | MS.gene32764:CDS | 25.0% |
| ! | AATAATAATAAGCATCAAGG+TGG | - | chr3.1:82952744-82952763 | MS.gene32764:CDS | 25.0% |
| ! | AATGAACTTTCAAGAATTTG+GGG | - | chr3.1:82955524-82955543 | MS.gene32764:CDS | 25.0% |
| ! | ACAATGAACTTTCAAGAATT+TGG | - | chr3.1:82955522-82955541 | MS.gene32764:CDS | 25.0% |
| ! | AGAGAAGAGTAAATACAATT+AGG | + | chr3.1:82954419-82954438 | None:intergenic | 25.0% |
| ! | AGCTAATTGTATAAGTAATC+TGG | - | chr3.1:82955282-82955301 | MS.gene32764:CDS | 25.0% |
| ! | CAATGAACTTTCAAGAATTT+GGG | - | chr3.1:82955523-82955542 | MS.gene32764:CDS | 25.0% |
| ! | CACTGAATGAAAAAATAAAG+AGG | - | chr3.1:82955257-82955276 | MS.gene32764:CDS | 25.0% |
| ! | GGTAATAATAATAAGCATCA+AGG | - | chr3.1:82952741-82952760 | MS.gene32764:CDS | 25.0% |
| ! | TAAAGAAATTACCAATGAGA+TGG | - | chr3.1:82954081-82954100 | MS.gene32764:intron | 25.0% |
| ! | TATACACTTCTCTTTGTTAA+GGG | - | chr3.1:82954350-82954369 | MS.gene32764:CDS | 25.0% |
| ! | TTATACACTTCTCTTTGTTA+AGG | - | chr3.1:82954349-82954368 | MS.gene32764:CDS | 25.0% |
| ! | TTCTTGTATATGATTTCATC+AGG | + | chr3.1:82953257-82953276 | None:intergenic | 25.0% |
| !! | ATCTTACAAGAGTTTTTCTT+GGG | + | chr3.1:82952998-82953017 | None:intergenic | 25.0% |
| !! | GAACTTTTTGTTGAAGAAAA+AGG | - | chr3.1:82953511-82953530 | MS.gene32764:CDS | 25.0% |
| AAAATGCTCCCATTATGAAT+AGG | - | chr3.1:82954469-82954488 | MS.gene32764:CDS | 30.0% | |
| AAATGCTCCCATTATGAATA+GGG | - | chr3.1:82954470-82954489 | MS.gene32764:CDS | 30.0% | |
| AACAGTTCTATAAACTGTTC+CGG | + | chr3.1:82953168-82953187 | None:intergenic | 30.0% | |
| AACATTCCTGAAAACGTAAT+AGG | + | chr3.1:82954122-82954141 | None:intergenic | 30.0% | |
| ACAAAAATGTTCCAATGAGA+AGG | + | chr3.1:82953691-82953710 | None:intergenic | 30.0% | |
| ACTGGAAAATACAGAGATTA+TGG | + | chr3.1:82954690-82954709 | None:intergenic | 30.0% | |
| ATATATTCTTACTTGCAGCT+AGG | + | chr3.1:82954154-82954173 | None:intergenic | 30.0% | |
| ATCTAGAGAATTAGAGATTG+TGG | + | chr3.1:82954026-82954045 | None:intergenic | 30.0% | |
| ATTACTTGTAGAGTTGTTGA+TGG | - | chr3.1:82954181-82954200 | MS.gene32764:intron | 30.0% | |
| CAAAAATGTTCCAATGAGAA+GGG | + | chr3.1:82953690-82953709 | None:intergenic | 30.0% | |
| CAAAATTATCTTGCAGCTAT+TGG | - | chr3.1:82955060-82955079 | MS.gene32764:CDS | 30.0% | |
| CAATTAAACAAGCTAGTTAC+AGG | - | chr3.1:82954775-82954794 | MS.gene32764:CDS | 30.0% | |
| CACTTAAGATAACTTGAATC+AGG | + | chr3.1:82955660-82955679 | None:intergenic | 30.0% | |
| CTAAAAGGATTCCATCAATA+GGG | + | chr3.1:82953064-82953083 | None:intergenic | 30.0% | |
| CTTCTGTAATAATTGCTGAT+CGG | + | chr3.1:82955172-82955191 | None:intergenic | 30.0% | |
| GATCAAAGAAAGATTTGACA+TGG | + | chr3.1:82953757-82953776 | None:intergenic | 30.0% | |
| TAACAGTTGAGGAACTAAAA+AGG | - | chr3.1:82953375-82953394 | MS.gene32764:intron | 30.0% | |
| TAAGCATTTGCAAGATTGTA+TGG | - | chr3.1:82954251-82954270 | MS.gene32764:intron | 30.0% | |
| TATATTCTTACTTGCAGCTA+GGG | + | chr3.1:82954153-82954172 | None:intergenic | 30.0% | |
| TATTACAGAAGCCCTAATAT+GGG | - | chr3.1:82955181-82955200 | MS.gene32764:CDS | 30.0% | |
| TCTAAAAGGATTCCATCAAT+AGG | + | chr3.1:82953065-82953084 | None:intergenic | 30.0% | |
| TGTACTCCTGAAACTAAAAT+GGG | + | chr3.1:82953879-82953898 | None:intergenic | 30.0% | |
| TGTTCACCAAATCTTGATTT+GGG | + | chr3.1:82953035-82953054 | None:intergenic | 30.0% | |
| TTACAGATTGAGATTCTGTT+TGG | - | chr3.1:82954663-82954682 | MS.gene32764:CDS | 30.0% | |
| TTATTACAGAAGCCCTAATA+TGG | - | chr3.1:82955180-82955199 | MS.gene32764:CDS | 30.0% | |
| TTGTACTCCTGAAACTAAAA+TGG | + | chr3.1:82953880-82953899 | None:intergenic | 30.0% | |
| TTGTTCACCAAATCTTGATT+TGG | + | chr3.1:82953036-82953055 | None:intergenic | 30.0% | |
| ! | GACATTGTTGCTAAAGATTT+TGG | - | chr3.1:82953721-82953740 | MS.gene32764:intron | 30.0% |
| ! | GATCTTACAAGAGTTTTTCT+TGG | + | chr3.1:82952999-82953018 | None:intergenic | 30.0% |
| ! | TAGCTGCAAGATAATTTTGA+AGG | + | chr3.1:82955059-82955078 | None:intergenic | 30.0% |
| ! | TCTCATTGGAACATTTTTGT+GGG | - | chr3.1:82953691-82953710 | MS.gene32764:intron | 30.0% |
| ! | TCTTACAAGAGTTTTTCTTG+GGG | + | chr3.1:82952997-82953016 | None:intergenic | 30.0% |
| ! | TTCTCATTGGAACATTTTTG+TGG | - | chr3.1:82953690-82953709 | MS.gene32764:intron | 30.0% |
| ! | TTTGAAATGTTAGCCGAATA+TGG | + | chr3.1:82955352-82955371 | None:intergenic | 30.0% |
| !! | ATAATTGCTGATCGGTTTTA+TGG | + | chr3.1:82955164-82955183 | None:intergenic | 30.0% |
| !! | TTCATGGACTATGAAGATTT+TGG | - | chr3.1:82953973-82953992 | MS.gene32764:intron | 30.0% |
| AACTAAAAAGGACGGAGATT+TGG | - | chr3.1:82953387-82953406 | MS.gene32764:intron | 35.0% | |
| ACAGTTCTATAAACTGTTCC+GGG | + | chr3.1:82953167-82953186 | None:intergenic | 35.0% | |
| ACTGTTCCGGGTTTATTATT+CGG | + | chr3.1:82953155-82953174 | None:intergenic | 35.0% | |
| AGCAAGAGAAAGTTTCTTCA+TGG | - | chr3.1:82953957-82953976 | MS.gene32764:intron | 35.0% | |
| AGTTGAGGAACTAAAAAGGA+CGG | - | chr3.1:82953379-82953398 | MS.gene32764:intron | 35.0% | |
| ATATTCTTACTTGCAGCTAG+GGG | + | chr3.1:82954152-82954171 | None:intergenic | 35.0% | |
| CAGAAAATCTTTAGCAGCTT+GGG | - | chr3.1:82954587-82954606 | MS.gene32764:CDS | 35.0% | |
| CATTACAAACACGAAGATGA+TGG | + | chr3.1:82954938-82954957 | None:intergenic | 35.0% | |
| CTTCCTTAATCAAGAACCTA+CGG | + | chr3.1:82954515-82954534 | None:intergenic | 35.0% | |
| GATTAAGGAAGAAGTTCCTT+TGG | - | chr3.1:82954524-82954543 | MS.gene32764:CDS | 35.0% | |
| GTAATGCATCCATTTGATGT+TGG | - | chr3.1:82954952-82954971 | MS.gene32764:CDS | 35.0% | |
| GTTCTTGATATACCTTCAAC+TGG | + | chr3.1:82954708-82954727 | None:intergenic | 35.0% | |
| TAAAGGTAGCACAAAGAAAG+AGG | - | chr3.1:82953904-82953923 | MS.gene32764:CDS | 35.0% | |
| TCAACTCATGATCATGATCT+TGG | + | chr3.1:82952848-82952867 | None:intergenic | 35.0% | |
| TCGATGTCCCTATTCATAAT+GGG | + | chr3.1:82954480-82954499 | None:intergenic | 35.0% | |
| TCTAAGCCCAAATCAAGATT+TGG | - | chr3.1:82953026-82953045 | MS.gene32764:intron | 35.0% | |
| TTTCTTTGTGCTACCTTTAC+TGG | + | chr3.1:82953903-82953922 | None:intergenic | 35.0% | |
| ! | AATGTATCCAGGTTTTCACT+TGG | - | chr3.1:82953561-82953580 | MS.gene32764:CDS | 35.0% |
| ! | AGATTTTGGATGGTGTAACA+TGG | - | chr3.1:82953654-82953673 | MS.gene32764:CDS | 35.0% |
| ! | CTTACTTGTGTTGATCTACT+AGG | - | chr3.1:82954227-82954246 | MS.gene32764:intron | 35.0% |
| ! | GTAAGGTTTTCATTTGTAGC+AGG | + | chr3.1:82952975-82952994 | None:intergenic | 35.0% |
| ! | TAAATTGGCCACGAAGATTT+TGG | - | chr3.1:82953640-82953659 | MS.gene32764:CDS | 35.0% |
| ! | TCTCTGTATTTTCCAGTTGA+AGG | - | chr3.1:82954693-82954712 | MS.gene32764:CDS | 35.0% |
| !! | AGAGTTGTTGATGGTTGTAA+GGG | - | chr3.1:82954190-82954209 | MS.gene32764:intron | 35.0% |
| !! | ATGTTTTATAGATGGTGTCG+AGG | - | chr3.1:82954981-82955000 | MS.gene32764:CDS | 35.0% |
| !! | TAGAGTTGTTGATGGTTGTA+AGG | - | chr3.1:82954189-82954208 | MS.gene32764:intron | 35.0% |
| !!! | AAGGTGCTTTATTTTGTCCA+TGG | - | chr3.1:82953530-82953549 | MS.gene32764:CDS | 35.0% |
| AAAATCTTTAGCAGCTTGGG+TGG | - | chr3.1:82954590-82954609 | MS.gene32764:CDS | 40.0% | |
| AAACTAGGATGCCAGTATTG+TGG | + | chr3.1:82955438-82955457 | None:intergenic | 40.0% | |
| ACTCCGTAGGTTCTTGATTA+AGG | - | chr3.1:82954509-82954528 | MS.gene32764:CDS | 40.0% | |
| AGATACTACCTTATTCCGCA+AGG | - | chr3.1:82955612-82955631 | MS.gene32764:CDS | 40.0% | |
| AGGATTCCATCAATAGGGTA+AGG | + | chr3.1:82953059-82953078 | None:intergenic | 40.0% | |
| AGTAGTGTGGCTTCTTCTAA+TGG | - | chr3.1:82954819-82954838 | MS.gene32764:CDS | 40.0% | |
| CCAGAAAATCTTTAGCAGCT+TGG | - | chr3.1:82954586-82954605 | MS.gene32764:CDS | 40.0% | |
| CGTTCACCGAATAATAAACC+CGG | - | chr3.1:82953146-82953165 | MS.gene32764:CDS | 40.0% | |
| CTACACTGTCACCCATATTA+GGG | + | chr3.1:82955195-82955214 | None:intergenic | 40.0% | |
| CTTAAGCGACACTAAAACAG+CGG | - | chr3.1:82954747-82954766 | MS.gene32764:CDS | 40.0% | |
| GAACAACCTTACCCTATTGA+TGG | - | chr3.1:82953050-82953069 | MS.gene32764:intron | 40.0% | |
| GAGTCTGCAGAACATATTGA+TGG | + | chr3.1:82953799-82953818 | None:intergenic | 40.0% | |
| GATGGAGAAGAAAACAGAAG+TGG | - | chr3.1:82952779-82952798 | MS.gene32764:CDS | 40.0% | |
| GGATACATTTCTTCAGTCCA+TGG | + | chr3.1:82953550-82953569 | None:intergenic | 40.0% | |
| GTCGATGTCCCTATTCATAA+TGG | + | chr3.1:82954481-82954500 | None:intergenic | 40.0% | |
| GTGGCATGTTAGTTACCAAA+TGG | - | chr3.1:82953456-82953475 | MS.gene32764:CDS | 40.0% | |
| GTGGTGGCAATTTCAAATGT+GGG | - | chr3.1:82952801-82952820 | MS.gene32764:CDS | 40.0% | |
| GTTTGTGTTTGTGTGCATCA+CGG | - | chr3.1:82953334-82953353 | MS.gene32764:intron | 40.0% | |
| TACACCATCCAAAATCTTCG+TGG | + | chr3.1:82953651-82953670 | None:intergenic | 40.0% | |
| TAGAAGAAGCCACACTACTA+TGG | + | chr3.1:82954818-82954837 | None:intergenic | 40.0% | |
| TAGTTTCAGTTTGGCAGTGA+AGG | - | chr3.1:82955452-82955471 | MS.gene32764:CDS | 40.0% | |
| TCTACACTGTCACCCATATT+AGG | + | chr3.1:82955196-82955215 | None:intergenic | 40.0% | |
| TGGACTGAAGAAATGTATCC+AGG | - | chr3.1:82953550-82953569 | MS.gene32764:CDS | 40.0% | |
| TGGAGTCGAACGATCTAAAT+TGG | - | chr3.1:82953625-82953644 | MS.gene32764:CDS | 40.0% | |
| TTCACTGCCAAACTGAAACT+AGG | + | chr3.1:82955453-82955472 | None:intergenic | 40.0% | |
| TTTATGGCTAGGACAGAGTT+TGG | + | chr3.1:82955148-82955167 | None:intergenic | 40.0% | |
| TTTGTGTTTGTGTGCATCAC+GGG | - | chr3.1:82953335-82953354 | MS.gene32764:intron | 40.0% | |
| ! | ACTCTTGTTTCCCTTCTCAT+TGG | - | chr3.1:82953677-82953696 | MS.gene32764:CDS | 40.0% |
| ! | ATTTGTAGCAGGAGCTTTTG+GGG | + | chr3.1:82952964-82952983 | None:intergenic | 40.0% |
| ! | CAAGAGTTTTTCTTGGGGTA+AGG | + | chr3.1:82952992-82953011 | None:intergenic | 40.0% |
| ! | CATTTGTAGCAGGAGCTTTT+GGG | + | chr3.1:82952965-82952984 | None:intergenic | 40.0% |
| ! | CCAAGCTGCTAAAGATTTTC+TGG | + | chr3.1:82954589-82954608 | None:intergenic | 40.0% |
| ! | GGCGATCGATGTTTTATAGA+TGG | - | chr3.1:82954973-82954992 | MS.gene32764:CDS | 40.0% |
| ! | GGTTTATTATTCGGTGAACG+TGG | + | chr3.1:82953146-82953165 | None:intergenic | 40.0% |
| ! | TAGGGACGAACCTTATTTCA+GGG | + | chr3.1:82952929-82952948 | None:intergenic | 40.0% |
| ! | TCATTTGTAGCAGGAGCTTT+TGG | + | chr3.1:82952966-82952985 | None:intergenic | 40.0% |
| ! | TGGGTGCTTTTAATCAATCG+TGG | - | chr3.1:82953605-82953624 | MS.gene32764:CDS | 40.0% |
| ! | TTCAGGAGTACAACCAGTAA+AGG | - | chr3.1:82953887-82953906 | MS.gene32764:CDS | 40.0% |
| !! | CTTGTGATGGTGACATTTTG+TGG | - | chr3.1:82953437-82953456 | MS.gene32764:CDS | 40.0% |
| !! | GAGCTTTTGGGGGTTTATTT+GGG | + | chr3.1:82952953-82952972 | None:intergenic | 40.0% |
| !! | GTACTTGCTGCTTTCATGTT+TGG | - | chr3.1:82954886-82954905 | MS.gene32764:CDS | 40.0% |
| !! | GTTGGCTAGTTTAACAGTTG+AGG | - | chr3.1:82953364-82953383 | MS.gene32764:intron | 40.0% |
| !!! | GCACTTCCCATTTTAGTTTC+AGG | - | chr3.1:82953870-82953889 | MS.gene32764:CDS | 40.0% |
| AAGCGATCCAAGTGAAAACC+TGG | + | chr3.1:82953571-82953590 | None:intergenic | 45.0% | |
| AATTTGGGGAGAAGACCAAG+CGG | - | chr3.1:82955538-82955557 | MS.gene32764:CDS | 45.0% | |
| ACGACGTCAGCAGAGAAAAT+CGG | - | chr3.1:82955232-82955251 | MS.gene32764:CDS | 45.0% | |
| ACTCGACTGTTGGCCATATT+CGG | - | chr3.1:82955336-82955355 | MS.gene32764:CDS | 45.0% | |
| ACTGTGCTTCCCCTGAAATA+AGG | - | chr3.1:82952916-82952935 | MS.gene32764:CDS | 45.0% | |
| AGCAGTTGCTTCCATCTCAT+TGG | + | chr3.1:82954095-82954114 | None:intergenic | 45.0% | |
| AGGTGTTCATCTCAGACACA+TGG | - | chr3.1:82955632-82955651 | MS.gene32764:CDS | 45.0% | |
| AGTTACAGGAGTCCTAGTAG+TGG | - | chr3.1:82954789-82954808 | MS.gene32764:CDS | 45.0% | |
| ATATGGCCAACAGTCGAGTT+AGG | + | chr3.1:82955335-82955354 | None:intergenic | 45.0% | |
| ATGGAAGAGGCTGAGAAAGT+CGG | - | chr3.1:82953836-82953855 | MS.gene32764:CDS | 45.0% | |
| ATGTTCTGCAGACTCTCTCT+GGG | - | chr3.1:82953804-82953823 | MS.gene32764:CDS | 45.0% | |
| CACTAATTCACTTCTCCGCT+TGG | + | chr3.1:82955556-82955575 | None:intergenic | 45.0% | |
| CACTCCTAGAACACCTTTGA+TGG | - | chr3.1:82953205-82953224 | MS.gene32764:CDS | 45.0% | |
| CATCGATCGCCAACATCAAA+TGG | + | chr3.1:82954964-82954983 | None:intergenic | 45.0% | |
| CATGATCATGATCTTGGCCA+TGG | + | chr3.1:82952842-82952861 | None:intergenic | 45.0% | |
| CTACTATGGTCACCACTACT+AGG | + | chr3.1:82954804-82954823 | None:intergenic | 45.0% | |
| CTGGCATCCTAGTTTCAGTT+TGG | - | chr3.1:82955443-82955462 | MS.gene32764:CDS | 45.0% | |
| GAAGAAAACAGAAGTGGTGG+TGG | - | chr3.1:82952785-82952804 | MS.gene32764:CDS | 45.0% | |
| GACAATGTGCGTGAACCATT+TGG | + | chr3.1:82953474-82953493 | None:intergenic | 45.0% | |
| GATGAACACCTTGCGGAATA+AGG | + | chr3.1:82955623-82955642 | None:intergenic | 45.0% | |
| GCGGAGAAGTGAATTAGTGA+TGG | - | chr3.1:82955557-82955576 | MS.gene32764:CDS | 45.0% | |
| GCGTAAGAGACTAACGACTA+AGG | - | chr3.1:82953298-82953317 | MS.gene32764:CDS | 45.0% | |
| GGAGAAGAAAACAGAAGTGG+TGG | - | chr3.1:82952782-82952801 | MS.gene32764:CDS | 45.0% | |
| GGTGAACGTGGTGCTTTATA+TGG | + | chr3.1:82953134-82953153 | None:intergenic | 45.0% | |
| GGTGACTTTGTAGAGTAACG+AGG | + | chr3.1:82952888-82952907 | None:intergenic | 45.0% | |
| GTGGCAATTTCAAATGTGGG+TGG | - | chr3.1:82952804-82952823 | MS.gene32764:CDS | 45.0% | |
| TAGATGCAGTGATGAACTCG+AGG | - | chr3.1:82953996-82954015 | MS.gene32764:intron | 45.0% | |
| TAGTGGTGACCATAGTAGTG+TGG | - | chr3.1:82954806-82954825 | MS.gene32764:CDS | 45.0% | |
| TATGAATAGGGACATCGACG+AGG | - | chr3.1:82954482-82954501 | MS.gene32764:CDS | 45.0% | |
| TATGGCCAACAGTCGAGTTA+GGG | + | chr3.1:82955334-82955353 | None:intergenic | 45.0% | |
| TATGTTCTGCAGACTCTCTC+TGG | - | chr3.1:82953803-82953822 | MS.gene32764:intron | 45.0% | |
| TCCTTTGGTATTTCCCCTAC+TGG | - | chr3.1:82954539-82954558 | MS.gene32764:CDS | 45.0% | |
| TGGAGAGGAATCCACAATAC+TGG | - | chr3.1:82955424-82955443 | MS.gene32764:CDS | 45.0% | |
| TTCTCAGCCTCTTCCATTAG+TGG | + | chr3.1:82953833-82953852 | None:intergenic | 45.0% | |
| TTGGGGGTTTATTTGGGCTA+GGG | + | chr3.1:82952947-82952966 | None:intergenic | 45.0% | |
| TTTGGGGGTTTATTTGGGCT+AGG | + | chr3.1:82952948-82952967 | None:intergenic | 45.0% | |
| ! | AAGGACGGAGATTTGGAGTT+TGG | - | chr3.1:82953394-82953413 | MS.gene32764:intron | 45.0% |
| ! | AGATTTGGAGTTTGGGGCTT+TGG | - | chr3.1:82953402-82953421 | MS.gene32764:intron | 45.0% |
| ! | AGGACGGAGATTTGGAGTTT+GGG | - | chr3.1:82953395-82953414 | MS.gene32764:intron | 45.0% |
| ! | AGGGACGAACCTTATTTCAG+GGG | + | chr3.1:82952928-82952947 | None:intergenic | 45.0% |
| ! | CTAGGGACGAACCTTATTTC+AGG | + | chr3.1:82952930-82952949 | None:intergenic | 45.0% |
| ! | CTGCTGCCTATTACGTTTTC+AGG | - | chr3.1:82954113-82954132 | MS.gene32764:intron | 45.0% |
| ! | GATGGTTGTAAGGGCATGTT+TGG | - | chr3.1:82954199-82954218 | MS.gene32764:intron | 45.0% |
| ! | GGTGGTGGCAATTTCAAATG+TGG | - | chr3.1:82952800-82952819 | MS.gene32764:CDS | 45.0% |
| ! | GGTTTTCACTTGGATCGCTT+TGG | - | chr3.1:82953571-82953590 | MS.gene32764:CDS | 45.0% |
| ! | TCAGGGGAAGCACAGTTTAA+AGG | + | chr3.1:82952912-82952931 | None:intergenic | 45.0% |
| ! | TGTCTGAGATGAACACCTTG+CGG | + | chr3.1:82955630-82955649 | None:intergenic | 45.0% |
| ! | TTGGCCACGAAGATTTTGGA+TGG | - | chr3.1:82953644-82953663 | MS.gene32764:CDS | 45.0% |
| ! | TTTGTAGCAGGAGCTTTTGG+GGG | + | chr3.1:82952963-82952982 | None:intergenic | 45.0% |
| !! | CGCTTTGGTTCTACTCACAT+GGG | - | chr3.1:82953586-82953605 | MS.gene32764:CDS | 45.0% |
| !! | GATGCCATCAAAGGTGTTCT+AGG | + | chr3.1:82953212-82953231 | None:intergenic | 45.0% |
| !! | GGAGCTTTTGGGGGTTTATT+TGG | + | chr3.1:82952954-82952973 | None:intergenic | 45.0% |
| !! | TCGCTTTGGTTCTACTCACA+TGG | - | chr3.1:82953585-82953604 | MS.gene32764:CDS | 45.0% |
| !! | TGCTGATCGGTTTTATGGCT+AGG | + | chr3.1:82955159-82955178 | None:intergenic | 45.0% |
| !!! | CGCTGTTTTAGTGTCGCTTA+AGG | + | chr3.1:82954749-82954768 | None:intergenic | 45.0% |
| AGGTGGTGAAGTGAGCATGA+TGG | - | chr3.1:82952761-82952780 | MS.gene32764:CDS | 50.0% | |
| ATGGCCAACAGTCGAGTTAG+GGG | + | chr3.1:82955333-82955352 | None:intergenic | 50.0% | |
| CAAGTACTAGCTGCGATGAG+AGG | + | chr3.1:82954873-82954892 | None:intergenic | 50.0% | |
| CATGATCTTGGCCATGGTGA+TGG | + | chr3.1:82952836-82952855 | None:intergenic | 50.0% | |
| CTTTAGCAGCTTGGGTGGTA+AGG | - | chr3.1:82954595-82954614 | MS.gene32764:CDS | 50.0% | |
| GAGGTGGTGTATGCTTGTGA+TGG | - | chr3.1:82953424-82953443 | MS.gene32764:CDS | 50.0% | |
| GCCAGTAGGGGAAATACCAA+AGG | + | chr3.1:82954543-82954562 | None:intergenic | 50.0% | |
| TACTGGCACAGGCAGAAACA+GGG | - | chr3.1:82954556-82954575 | MS.gene32764:CDS | 50.0% | |
| TCAGCCTCTTCCATTAGTGG+AGG | + | chr3.1:82953830-82953849 | None:intergenic | 50.0% | |
| ! | ACACCTTTGATGGCATCTCC+AGG | - | chr3.1:82953215-82953234 | MS.gene32764:CDS | 50.0% |
| ! | GGACGGAGATTTGGAGTTTG+GGG | - | chr3.1:82953396-82953415 | MS.gene32764:intron | 50.0% |
| ! | GGGGAAGCACAGTTTAAAGG+TGG | + | chr3.1:82952909-82952928 | None:intergenic | 50.0% |
| ! | TGTTTCTGCCTGTGCCAGTA+GGG | + | chr3.1:82954556-82954575 | None:intergenic | 50.0% |
| ! | TTTGGAGTTTGGGGCTTTGG+AGG | - | chr3.1:82953405-82953424 | MS.gene32764:intron | 50.0% |
| CTACTGGCACAGGCAGAAAC+AGG | - | chr3.1:82954555-82954574 | MS.gene32764:CDS | 55.0% | |
| CTCACCCCTAACTCGACTGT+TGG | - | chr3.1:82955326-82955345 | MS.gene32764:CDS | 55.0% | |
| GAAGAGGCTGAGAAAGTCGG+CGG | - | chr3.1:82953839-82953858 | MS.gene32764:CDS | 55.0% | |
| GGACCTGGAGATGCCATCAA+AGG | + | chr3.1:82953221-82953240 | None:intergenic | 55.0% | |
| GGTATTTCCCCTACTGGCAC+AGG | - | chr3.1:82954545-82954564 | MS.gene32764:CDS | 55.0% | |
| GGTGGAGATAGCCATCACCA+TGG | - | chr3.1:82952822-82952841 | MS.gene32764:CDS | 55.0% | |
| GTTTCTGCCTGTGCCAGTAG+GGG | + | chr3.1:82954555-82954574 | None:intergenic | 55.0% | |
| TCATCAGGATCCTCACCAGC+TGG | + | chr3.1:82953242-82953261 | None:intergenic | 55.0% | |
| TCGACGAGGATGAACTCCGT+AGG | - | chr3.1:82954496-82954515 | MS.gene32764:CDS | 55.0% | |
| TCTCTCTGGGCCTCCACTAA+TGG | - | chr3.1:82953817-82953836 | MS.gene32764:CDS | 55.0% | |
| TGGGCCTCCACTAATGGAAG+AGG | - | chr3.1:82953823-82953842 | MS.gene32764:CDS | 55.0% | |
| ! | GTGCATCACGGGTAGCTTGT+TGG | - | chr3.1:82953346-82953365 | MS.gene32764:intron | 55.0% |
| !! | CTGTTTCTGCCTGTGCCAGT+AGG | + | chr3.1:82954557-82954576 | None:intergenic | 55.0% |
| ATCTCCAGGTCCAGCTGGTG+AGG | - | chr3.1:82953229-82953248 | MS.gene32764:CDS | 60.0% | |
| ATGGCATCTCCAGGTCCAGC+TGG | - | chr3.1:82953224-82953243 | MS.gene32764:CDS | 60.0% | |
| !! | GGAGTTTGGGGCTTTGGAGG+TGG | - | chr3.1:82953408-82953427 | MS.gene32764:intron | 60.0% |
| GGATCCTCACCAGCTGGACC+TGG | + | chr3.1:82953236-82953255 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 82952735 | 82955680 | 82952735 | ID=MS.gene32764 |
| chr3.1 | mRNA | 82952735 | 82955680 | 82952735 | ID=MS.gene32764.t1;Parent=MS.gene32764 |
| chr3.1 | exon | 82954254 | 82955680 | 82954254 | ID=MS.gene32764.t1.exon1;Parent=MS.gene32764.t1 |
| chr3.1 | CDS | 82954254 | 82955680 | 82954254 | ID=cds.MS.gene32764.t1;Parent=MS.gene32764.t1 |
| chr3.1 | exon | 82953804 | 82953924 | 82953804 | ID=MS.gene32764.t1.exon2;Parent=MS.gene32764.t1 |
| chr3.1 | CDS | 82953804 | 82953924 | 82953804 | ID=cds.MS.gene32764.t1;Parent=MS.gene32764.t1 |
| chr3.1 | exon | 82953413 | 82953706 | 82953413 | ID=MS.gene32764.t1.exon3;Parent=MS.gene32764.t1 |
| chr3.1 | CDS | 82953413 | 82953706 | 82953413 | ID=cds.MS.gene32764.t1;Parent=MS.gene32764.t1 |
| chr3.1 | exon | 82953137 | 82953339 | 82953137 | ID=MS.gene32764.t1.exon4;Parent=MS.gene32764.t1 |
| chr3.1 | CDS | 82953137 | 82953339 | 82953137 | ID=cds.MS.gene32764.t1;Parent=MS.gene32764.t1 |
| chr3.1 | exon | 82952735 | 82952996 | 82952735 | ID=MS.gene32764.t1.exon5;Parent=MS.gene32764.t1 |
| chr3.1 | CDS | 82952735 | 82952996 | 82952735 | ID=cds.MS.gene32764.t1;Parent=MS.gene32764.t1 |
| Gene Sequence |
| Protein sequence |
