Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42628.t1 | XP_024633438.1 | 98.5 | 733 | 10 | 1 | 37 | 768 | 39 | 771 | 0.00E+00 | 1384.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42628.t1 | Q9LYG9 | 56.2 | 712 | 293 | 9 | 50 | 757 | 34 | 730 | 2.7e-207 | 723.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42628.t1 | G7J8E6 | 98.5 | 733 | 10 | 1 | 37 | 768 | 39 | 771 | 0.0e+00 | 1384.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053097 | MS.gene42628 | 0.812998 | 3.20E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene42628 | -0.804416 | 2.18E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene42688 | MS.gene42628 | PPI |
| MS.gene32770 | MS.gene42628 | PPI |
| MS.gene014973 | MS.gene42628 | PPI |
| MS.gene42620 | MS.gene42628 | PPI |
| MS.gene014981 | MS.gene42628 | PPI |
| MS.gene32773 | MS.gene42628 | PPI |
| MS.gene014978 | MS.gene42628 | PPI |
| MS.gene97525 | MS.gene42628 | PPI |
| MS.gene42628 | MS.gene014981 | PPI |
| MS.gene42681 | MS.gene42628 | PPI |
| MS.gene74110 | MS.gene42628 | PPI |
| MS.gene42686 | MS.gene42628 | PPI |
| MS.gene32764 | MS.gene42628 | PPI |
| MS.gene062410 | MS.gene42628 | PPI |
| MS.gene42622 | MS.gene42628 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42628.t1 | MTR_3g104990 | 98.184 | 771 | 11 | 2 | 1 | 768 | 1 | 771 | 0.0 | 1551 |
| MS.gene42628.t1 | MTR_3g104940 | 86.305 | 774 | 98 | 4 | 1 | 768 | 1 | 772 | 0.0 | 1300 |
| MS.gene42628.t1 | MTR_3g104920 | 80.415 | 771 | 126 | 6 | 1 | 768 | 1 | 749 | 0.0 | 1223 |
| MS.gene42628.t1 | MTR_3g104920 | 80.449 | 757 | 125 | 5 | 15 | 768 | 1 | 737 | 0.0 | 1203 |
| MS.gene42628.t1 | MTR_2g041220 | 51.184 | 760 | 321 | 16 | 19 | 757 | 15 | 745 | 0.0 | 702 |
| MS.gene42628.t1 | MTR_8g071250 | 46.528 | 576 | 285 | 10 | 195 | 760 | 129 | 691 | 1.54e-164 | 492 |
| MS.gene42628.t1 | MTR_1g113850 | 40.117 | 683 | 341 | 11 | 137 | 767 | 251 | 917 | 4.21e-158 | 483 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42628.t1 | AT5G12080 | 58.345 | 713 | 278 | 9 | 49 | 757 | 33 | 730 | 0.0 | 827 |
| MS.gene42628.t1 | AT5G12080 | 58.345 | 713 | 278 | 9 | 49 | 757 | 33 | 730 | 0.0 | 827 |
| MS.gene42628.t1 | AT5G12080 | 58.345 | 713 | 278 | 9 | 49 | 757 | 33 | 730 | 0.0 | 827 |
| MS.gene42628.t1 | AT5G19520 | 52.983 | 704 | 312 | 6 | 58 | 757 | 50 | 738 | 0.0 | 744 |
| MS.gene42628.t1 | AT5G19520 | 52.983 | 704 | 312 | 6 | 58 | 757 | 50 | 738 | 0.0 | 744 |
| MS.gene42628.t1 | AT2G17010 | 41.556 | 604 | 317 | 5 | 188 | 760 | 292 | 890 | 5.05e-158 | 482 |
| MS.gene42628.t1 | AT1G53470 | 39.769 | 694 | 356 | 12 | 115 | 760 | 181 | 860 | 1.18e-155 | 475 |
| MS.gene42628.t1 | AT3G14810 | 42.197 | 692 | 344 | 15 | 115 | 765 | 188 | 864 | 5.67e-155 | 473 |
| MS.gene42628.t1 | AT1G78610 | 42.296 | 636 | 325 | 8 | 166 | 767 | 211 | 838 | 9.95e-154 | 469 |
| MS.gene42628.t1 | AT2G17000 | 41.408 | 611 | 317 | 9 | 182 | 760 | 222 | 823 | 3.53e-144 | 444 |
| MS.gene42628.t1 | AT2G17000 | 41.408 | 611 | 317 | 9 | 182 | 760 | 222 | 823 | 6.04e-144 | 444 |
| MS.gene42628.t1 | AT3G14810 | 39.623 | 689 | 325 | 16 | 115 | 762 | 188 | 826 | 1.05e-134 | 420 |
| MS.gene42628.t1 | AT2G17010 | 35.833 | 360 | 195 | 5 | 188 | 516 | 292 | 646 | 2.65e-64 | 227 |
Find 152 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAATGAACTTTCAAGAATT+TGG | 0.059991 | 3.4:-91916277 | MS.gene42628:CDS |
| GACATTGTTGCTAAAGATTT+TGG | 0.123829 | 3.4:-91918078 | MS.gene42628:CDS |
| TTTCTTTGTGCTACCTTTAC+TGG | 0.130051 | 3.4:+91917899 | None:intergenic |
| TAAATTGGCCACGAAGATTT+TGG | 0.178672 | 3.4:-91918159 | MS.gene42628:CDS |
| TCTACACTGTCACCCATATT+AGG | 0.187404 | 3.4:+91916606 | None:intergenic |
| TCATTTGTAGCAGGAGCTTT+TGG | 0.190150 | 3.4:+91918836 | None:intergenic |
| TTGTACTCCTGAAACTAAAA+TGG | 0.194746 | 3.4:+91917922 | None:intergenic |
| CAATGAACTTTCAAGAATTT+GGG | 0.230393 | 3.4:-91916276 | MS.gene42628:CDS |
| AGATTTGGAGTTTGGGGCTT+TGG | 0.250678 | 3.4:-91918397 | MS.gene42628:CDS |
| AAGTAACATTCTCTTCTAAA+AGG | 0.256225 | 3.4:+91918723 | None:intergenic |
| TTCATGGACTATGAAGATTT+TGG | 0.258155 | 3.4:-91917826 | MS.gene42628:CDS |
| ACTCCGTAGGTTCTTGATTA+AGG | 0.262247 | 3.4:-91917290 | MS.gene42628:CDS |
| CTAGGGATGAACCTTATTTC+AGG | 0.265146 | 3.4:+91918872 | None:intergenic |
| TCAGGGGAAGCACAGTTTAA+AGG | 0.276027 | 3.4:+91918890 | None:intergenic |
| AAGGACGGAGATTTGGAGTT+TGG | 0.278610 | 3.4:-91918405 | MS.gene42628:CDS |
| GTACTTGCTGCTTTCATGTT+TGG | 0.284157 | 3.4:-91916913 | MS.gene42628:CDS |
| TATGTTCTGCAGACTCTCTC+TGG | 0.284228 | 3.4:-91917996 | MS.gene42628:CDS |
| TTATTACAGAAGCCCTAATA+TGG | 0.287671 | 3.4:-91916619 | MS.gene42628:CDS |
| TTGTTCACCAAATCTTGATT+TGG | 0.289978 | 3.4:+91918766 | None:intergenic |
| ACTGTTCCGGGTTTATTATT+CGG | 0.295778 | 3.4:+91918647 | None:intergenic |
| AACAGTTCTATAAACTGTTC+CGG | 0.312967 | 3.4:+91918634 | None:intergenic |
| TTCTCAGCCTCTTCCATTAG+TGG | 0.319988 | 3.4:+91917969 | None:intergenic |
| TGGAGTCGAACGATCTAAAT+TGG | 0.321444 | 3.4:-91918174 | MS.gene42628:CDS |
| TAACAGTTGAGGAACTAAAA+AGG | 0.321821 | 3.4:-91918424 | MS.gene42628:CDS |
| GATGAACACCTTGCGGAATA+AGG | 0.326639 | 3.4:+91916179 | None:intergenic |
| TCTAAAAGGATTCCATCAAT+AGG | 0.336245 | 3.4:+91918737 | None:intergenic |
| GGTGAACGTGGTGCTTTATA+TGG | 0.336535 | 3.4:+91918668 | None:intergenic |
| ACTGTGCTTCCCCTGAAATA+AGG | 0.336839 | 3.4:-91918883 | MS.gene42628:CDS |
| CTACTGGCACAGGCAGAAAC+AGG | 0.337087 | 3.4:-91917244 | MS.gene42628:CDS |
| TCTCTCTGGGCCTCCACTAA+TGG | 0.337430 | 3.4:-91917982 | MS.gene42628:CDS |
| CACTCCTAGAACACCTTTGA+TGG | 0.340051 | 3.4:-91918594 | MS.gene42628:CDS |
| TTTATGGCTAGGACAGAGTT+TGG | 0.349369 | 3.4:+91916654 | None:intergenic |
| CAGAAAATCTTTAGCAGCTT+GGG | 0.350080 | 3.4:-91917212 | MS.gene42628:CDS |
| AGGACGGAGATTTGGAGTTT+GGG | 0.350085 | 3.4:-91918404 | MS.gene42628:CDS |
| TGTTCACCAAATCTTGATTT+GGG | 0.359204 | 3.4:+91918767 | None:intergenic |
| TTTGGAGTTTGGGGCTTTGG+AGG | 0.367529 | 3.4:-91918394 | MS.gene42628:CDS |
| TCTAAGCCCAAATCAAGATT+TGG | 0.368072 | 3.4:-91918773 | MS.gene42628:CDS |
| AGCAAGAGAAAGTTTCTTCA+TGG | 0.373517 | 3.4:-91917842 | MS.gene42628:CDS |
| TCCTTTGGTATTTCCCCTAC+TGG | 0.375771 | 3.4:-91917260 | MS.gene42628:CDS |
| AAAGAAAGAGGTTATTGATA+TGG | 0.383412 | 3.4:-91917883 | MS.gene42628:CDS |
| AACATTCCTGAAAACGTAAT+AGG | 0.384096 | 3.4:+91917680 | None:intergenic |
| AGTAGTGTGGCTTCTTCTAA+TGG | 0.385108 | 3.4:-91916980 | MS.gene42628:CDS |
| GATGCCATCAAAGGTGTTCT+AGG | 0.387245 | 3.4:+91918590 | None:intergenic |
| TCAACTCATGATCATGATCT+TGG | 0.387525 | 3.4:+91918954 | None:intergenic |
| GGAGTTTGGGGCTTTGGAGG+TGG | 0.388035 | 3.4:-91918391 | MS.gene42628:CDS |
| CTACACTGTCACCCATATTA+GGG | 0.388576 | 3.4:+91916607 | None:intergenic |
| ACAGTTCTATAAACTGTTCC+GGG | 0.389897 | 3.4:+91918635 | None:intergenic |
| CACTTAAGATAACTTGAATC+AGG | 0.390741 | 3.4:+91916142 | None:intergenic |
| TTCTTGTATATGATTTCATC+AGG | 0.393170 | 3.4:+91918545 | None:intergenic |
| ACTCTTGTTTCCCTTCTCAT+TGG | 0.393699 | 3.4:-91918122 | MS.gene42628:CDS |
| CAATTAAACAAGCTAGTTAC+AGG | 0.398707 | 3.4:-91917024 | MS.gene42628:CDS |
| CCAGAAAATCTTTAGCAGCT+TGG | 0.399961 | 3.4:-91917213 | MS.gene42628:CDS |
| CACTAATTCACTTCTCCGCT+TGG | 0.404975 | 3.4:+91916246 | None:intergenic |
| CTGGCATCCTAGTTTCAGTT+TGG | 0.410393 | 3.4:-91916356 | MS.gene42628:CDS |
| GATTAAGGAAGAAGTTCCTT+TGG | 0.415393 | 3.4:-91917275 | MS.gene42628:CDS |
| CTACTATGGTCACCACTACT+AGG | 0.415578 | 3.4:+91916998 | None:intergenic |
| CTGTTTCTGCCTGTGCCAGT+AGG | 0.426864 | 3.4:+91917245 | None:intergenic |
| CATCGATCGCCAACATCAAA+TGG | 0.429406 | 3.4:+91916838 | None:intergenic |
| GACAATGTGCGTGAACCATT+TGG | 0.437003 | 3.4:+91918328 | None:intergenic |
| TGGAGAGGAATCCACAATAC+TGG | 0.438670 | 3.4:-91916375 | MS.gene42628:CDS |
| AGCAGTTGCTTCCATCTCAT+TGG | 0.438791 | 3.4:+91917707 | None:intergenic |
| TGTTTCTGCCTGTGCCAGTA+GGG | 0.443402 | 3.4:+91917246 | None:intergenic |
| GAACAACCTTACCCTATTGA+TGG | 0.443872 | 3.4:-91918749 | MS.gene42628:CDS |
| TATATTCTTACTTGCAGCTA+GGG | 0.445433 | 3.4:+91917649 | None:intergenic |
| CTTGAAACTTAATAATGAAA+AGG | 0.452787 | 3.4:-91916685 | MS.gene42628:CDS |
| CTAAAAGGATTCCATCAATA+GGG | 0.453814 | 3.4:+91918738 | None:intergenic |
| ACGACGTCAGCAGAGAAAAT+CGG | 0.461578 | 3.4:-91916567 | MS.gene42628:CDS |
| TAGAAGAAGCCACACTACTA+TGG | 0.462238 | 3.4:+91916984 | None:intergenic |
| GTGCATCACGGGTAGCTTGT+TGG | 0.471724 | 3.4:-91918453 | MS.gene42628:CDS |
| ATCTAGAGAATTAGAGATTG+TGG | 0.475217 | 3.4:+91917776 | None:intergenic |
| TCGCTTTGGTTCTACTCACA+TGG | 0.480459 | 3.4:-91918214 | MS.gene42628:CDS |
| GGTATTTCCCCTACTGGCAC+AGG | 0.484922 | 3.4:-91917254 | MS.gene42628:CDS |
| TGTACTCCTGAAACTAAAAT+GGG | 0.489996 | 3.4:+91917923 | None:intergenic |
| GGATCCTCACCAGCTGGACC+TGG | 0.490344 | 3.4:+91918566 | None:intergenic |
| GTGGCATGTTAGTTACCAAA+TGG | 0.493145 | 3.4:-91918343 | MS.gene42628:CDS |
| AAGAAAGTTGAATTTAGTAA+AGG | 0.494912 | 3.4:-91918527 | MS.gene42628:CDS |
| AAATGTAAATAAGATTAAGA+TGG | 0.497083 | 3.4:-91916317 | MS.gene42628:CDS |
| ATCTCCAGGTCCAGCTGGTG+AGG | 0.497675 | 3.4:-91918570 | MS.gene42628:CDS |
| AATGTAAATAAGATTAAGAT+GGG | 0.505449 | 3.4:-91916316 | MS.gene42628:CDS |
| TAGTTTCAGTTTGGCAGTGA+AGG | 0.512844 | 3.4:-91916347 | MS.gene42628:CDS |
| TTTGTGTTTGTGTGCATCAC+GGG | 0.513377 | 3.4:-91918464 | MS.gene42628:CDS |
| CGCTTTGGTTCTACTCACAT+GGG | 0.514104 | 3.4:-91918213 | MS.gene42628:CDS |
| TGGACTGAAGAAATGTATCC+AGG | 0.514151 | 3.4:-91918249 | MS.gene42628:CDS |
| ATGGCATCTCCAGGTCCAGC+TGG | 0.514371 | 3.4:-91918575 | MS.gene42628:CDS |
| TTCAGGAGTACAACCAGTAA+AGG | 0.520751 | 3.4:-91917912 | MS.gene42628:CDS |
| ATATATTCTTACTTGCAGCT+AGG | 0.525421 | 3.4:+91917648 | None:intergenic |
| ATGTTCTGCAGACTCTCTCT+GGG | 0.528282 | 3.4:-91917995 | MS.gene42628:CDS |
| TAGGGATGAACCTTATTTCA+GGG | 0.528282 | 3.4:+91918873 | None:intergenic |
| TCATCAGGATCCTCACCAGC+TGG | 0.532211 | 3.4:+91918560 | None:intergenic |
| GTTGGCTAGTTTAACAGTTG+AGG | 0.533975 | 3.4:-91918435 | MS.gene42628:CDS |
| CATTACAAACACGAAGATGA+TGG | 0.535612 | 3.4:+91916864 | None:intergenic |
| ACACCTTTGATGGCATCTCC+AGG | 0.537728 | 3.4:-91918584 | MS.gene42628:CDS |
| GGATACATTTCTTCAGTCCA+TGG | 0.539549 | 3.4:+91918252 | None:intergenic |
| GGACGGAGATTTGGAGTTTG+GGG | 0.539859 | 3.4:-91918403 | MS.gene42628:CDS |
| TACACCATCCAAAATCTTCG+TGG | 0.540293 | 3.4:+91918151 | None:intergenic |
| TATTACAGAAGCCCTAATAT+GGG | 0.542039 | 3.4:-91916618 | MS.gene42628:CDS |
| AGGATTCCATCAATAGGGTA+AGG | 0.542280 | 3.4:+91918743 | None:intergenic |
| TAAAGGTAGCACAAAGAAAG+AGG | 0.543539 | 3.4:-91917895 | MS.gene42628:CDS |
| GAGGTGGTGTATGCTTGTGA+TGG | 0.544535 | 3.4:-91918375 | MS.gene42628:CDS |
| GGTAATAATAATAAGCATCA+AGG | 0.546427 | 3.4:-91919058 | MS.gene42628:CDS |
| AAGCGATCCAAGTGAAAACC+TGG | 0.546867 | 3.4:+91918231 | None:intergenic |
| TAAAGAAATTACCAATGAGA+TGG | 0.550653 | 3.4:-91917718 | MS.gene42628:CDS |
| CTTCTGTAATAATTGCTGAT+CGG | 0.555225 | 3.4:+91916630 | None:intergenic |
| TCAGCCTCTTCCATTAGTGG+AGG | 0.556564 | 3.4:+91917972 | None:intergenic |
| GTAATGCATCCATTTGATGT+TGG | 0.558028 | 3.4:-91916847 | MS.gene42628:CDS |
| AAACTAGGATGCCAGTATTG+TGG | 0.562729 | 3.4:+91916364 | None:intergenic |
| TGGGCCTCCACTAATGGAAG+AGG | 0.563345 | 3.4:-91917976 | MS.gene42628:CDS |
| GCGTAAGAGACTAACAACTA+AGG | 0.563436 | 3.4:-91918501 | MS.gene42628:CDS |
| GGTTTATTATTCGGTGAACG+TGG | 0.564860 | 3.4:+91918656 | None:intergenic |
| CATGATCTTGGCCATGGTGA+TGG | 0.566466 | 3.4:+91918966 | None:intergenic |
| CTTCCTTAATCAAGAACCTA+CGG | 0.566575 | 3.4:+91917287 | None:intergenic |
| GTTTCTGCCTGTGCCAGTAG+GGG | 0.569425 | 3.4:+91917247 | None:intergenic |
| GTTTGTGTTTGTGTGCATCA+CGG | 0.570532 | 3.4:-91918465 | MS.gene42628:CDS |
| GAGTCTGCAGAACATACTGA+TGG | 0.570818 | 3.4:+91918003 | None:intergenic |
| AAAATCTTTAGCAGCTTGGG+TGG | 0.582100 | 3.4:-91917209 | MS.gene42628:intron |
| TGCATAGGGTTGTGAATGGA+TGG | 0.590999 | 3.4:-91919079 | None:intergenic |
| GAAGAAAACAGAAGTGGTGG+TGG | 0.592280 | 3.4:-91919014 | MS.gene42628:CDS |
| AATAAATTAGGTATTTGGAG+AGG | 0.593844 | 3.4:-91916390 | MS.gene42628:intron |
| GCGGAGAAGTGAATTAGTGA+TGG | 0.596207 | 3.4:-91916242 | MS.gene42628:CDS |
| CAAGTACTAGCTGCGATGAG+AGG | 0.600062 | 3.4:+91916929 | None:intergenic |
| TTCACTGCCAAACTGAAACT+AGG | 0.601450 | 3.4:+91916349 | None:intergenic |
| GTGGTGGCAATTTCAAATGT+GGG | 0.602248 | 3.4:-91918998 | MS.gene42628:CDS |
| GGACCTGGAGATGCCATCAA+AGG | 0.602592 | 3.4:+91918581 | None:intergenic |
| GATCAAAGAAAGATTTGACA+TGG | 0.605754 | 3.4:+91918045 | None:intergenic |
| ATATTCTTACTTGCAGCTAG+GGG | 0.610117 | 3.4:+91917650 | None:intergenic |
| ATGGAAGAGGCTGAGAAAGT+CGG | 0.617688 | 3.4:-91917963 | MS.gene42628:CDS |
| CATGATCATGATCTTGGCCA+TGG | 0.624053 | 3.4:+91918960 | None:intergenic |
| GGTGGTGGCAATTTCAAATG+TGG | 0.624592 | 3.4:-91918999 | MS.gene42628:CDS |
| GTGGCAATTTCAAATGTGGG+TGG | 0.626198 | 3.4:-91918995 | MS.gene42628:CDS |
| AATGAACTTTCAAGAATTTG+GGG | 0.631242 | 3.4:-91916275 | MS.gene42628:CDS |
| AGGGATGAACCTTATTTCAG+GGG | 0.633053 | 3.4:+91918874 | None:intergenic |
| AGGTGGTGAAGTGAGCATGA+TGG | 0.635799 | 3.4:-91919038 | MS.gene42628:CDS |
| GGGGAAGCACAGTTTAAAGG+TGG | 0.637546 | 3.4:+91918893 | None:intergenic |
| TACTGGCACAGGCAGAAACA+GGG | 0.640432 | 3.4:-91917243 | MS.gene42628:CDS |
| CGTTCACCGAATAATAAACC+CGG | 0.641887 | 3.4:-91918653 | MS.gene42628:CDS |
| GCCAGTAGGGGAAATACCAA+AGG | 0.642812 | 3.4:+91917259 | None:intergenic |
| AGATACTACCTTATTCCGCA+AGG | 0.644323 | 3.4:-91916187 | MS.gene42628:CDS |
| AGGTGTTCATCTCAGACACA+TGG | 0.650077 | 3.4:-91916167 | MS.gene42628:CDS |
| AGTTACAGGAGTCCTAGTAG+TGG | 0.671864 | 3.4:-91917010 | MS.gene42628:CDS |
| AATAATAATAAGCATCAAGG+TGG | 0.672497 | 3.4:-91919055 | MS.gene42628:CDS |
| TCGACGAGGATGAACTCCGT+AGG | 0.674026 | 3.4:-91917303 | MS.gene42628:CDS |
| GATGGAGAAGAAAACAGAAG+TGG | 0.675509 | 3.4:-91919020 | MS.gene42628:CDS |
| CTTAAGCGACACTAAAACAG+CGG | 0.676974 | 3.4:-91917052 | MS.gene42628:CDS |
| TAGTGGTGACCATAGTAGTG+TGG | 0.677764 | 3.4:-91916993 | MS.gene42628:CDS |
| GGAGAAGAAAACAGAAGTGG+TGG | 0.683682 | 3.4:-91919017 | MS.gene42628:CDS |
| GAAGAGGCTGAGAAAGTCGG+CGG | 0.686077 | 3.4:-91917960 | MS.gene42628:CDS |
| GGTGGAGATAACCATCACCA+TGG | 0.714042 | 3.4:-91918977 | MS.gene42628:CDS |
| AATTTGGGGAGAAGACCAAG+CGG | 0.720680 | 3.4:-91916261 | MS.gene42628:CDS |
| TGTCTGAGATGAACACCTTG+CGG | 0.733097 | 3.4:+91916172 | None:intergenic |
| TATGAATAGGGACATCGACG+AGG | 0.735291 | 3.4:-91917317 | MS.gene42628:intron |
| TAGATGCAGTGATGAACTCG+AGG | 0.741103 | 3.4:-91917803 | MS.gene42628:CDS |
| GGTGACTTTGTAGAGTAACG+AGG | 0.754563 | 3.4:+91918914 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTATTCTTTTAATAAATT+AGG | - | chr3.4:91918803-91918822 | MS.gene42628:CDS | 10.0% |
| !!! | TAACATTTCAAATATTTTTT+GGG | - | chr3.4:91918766-91918785 | MS.gene42628:CDS | 10.0% |
| !! | AAATGTAAATAAGATTAAGA+TGG | - | chr3.4:91918888-91918907 | MS.gene42628:CDS | 15.0% |
| !! | AATGTAAATAAGATTAAGAT+GGG | - | chr3.4:91918889-91918908 | MS.gene42628:CDS | 15.0% |
| !!! | CTAACATTTCAAATATTTTT+TGG | - | chr3.4:91918765-91918784 | MS.gene42628:CDS | 15.0% |
| !!! | CTTTTAATAAATTAGGTATT+TGG | - | chr3.4:91918810-91918829 | MS.gene42628:CDS | 15.0% |
| !! | AAGAAAGTTGAATTTAGTAA+AGG | - | chr3.4:91916678-91916697 | MS.gene42628:CDS | 20.0% |
| !! | CTTGAAACTTAATAATGAAA+AGG | - | chr3.4:91918520-91918539 | MS.gene42628:CDS | 20.0% |
| !! | TAAACAACTTAATTAAGTGT+TGG | + | chr3.4:91917791-91917810 | None:intergenic | 20.0% |
| !!! | ATAATTTTGAAGGCATTAAT+AGG | + | chr3.4:91918455-91918474 | None:intergenic | 20.0% |
| ! | AAAGAAAGAGGTTATTGATA+TGG | - | chr3.4:91917322-91917341 | MS.gene42628:intron | 25.0% |
| ! | AAGTAACATTCTCTTCTAAA+AGG | + | chr3.4:91916485-91916504 | None:intergenic | 25.0% |
| ! | AATAAATTAGGTATTTGGAG+AGG | - | chr3.4:91918815-91918834 | MS.gene42628:CDS | 25.0% |
| ! | AATAATAATAAGCATCAAGG+TGG | - | chr3.4:91916150-91916169 | MS.gene42628:CDS | 25.0% |
| ! | AATGAACTTTCAAGAATTTG+GGG | - | chr3.4:91918930-91918949 | MS.gene42628:CDS | 25.0% |
| ! | ACAATGAACTTTCAAGAATT+TGG | - | chr3.4:91918928-91918947 | MS.gene42628:CDS | 25.0% |
| ! | AGAGAAGAGTAAATACAATT+AGG | + | chr3.4:91917825-91917844 | None:intergenic | 25.0% |
| ! | AGCTAATTGTATAAGTAATC+TGG | - | chr3.4:91918688-91918707 | MS.gene42628:CDS | 25.0% |
| ! | CAATGAACTTTCAAGAATTT+GGG | - | chr3.4:91918929-91918948 | MS.gene42628:CDS | 25.0% |
| ! | CACTGAATGAAAAAATAAAG+AGG | - | chr3.4:91918663-91918682 | MS.gene42628:CDS | 25.0% |
| ! | GGTAATAATAATAAGCATCA+AGG | - | chr3.4:91916147-91916166 | MS.gene42628:CDS | 25.0% |
| ! | TAAAGAAATTACCAATGAGA+TGG | - | chr3.4:91917487-91917506 | MS.gene42628:intron | 25.0% |
| ! | TATACACTTCTCTTTGTTAA+GGG | - | chr3.4:91917756-91917775 | MS.gene42628:CDS | 25.0% |
| ! | TTATACACTTCTCTTTGTTA+AGG | - | chr3.4:91917755-91917774 | MS.gene42628:CDS | 25.0% |
| ! | TTCTTGTATATGATTTCATC+AGG | + | chr3.4:91916663-91916682 | None:intergenic | 25.0% |
| !! | ATCTTACAAGAGTTTTTCTT+GGG | + | chr3.4:91916404-91916423 | None:intergenic | 25.0% |
| !! | GAACTTTTTGTTGAAGAAAA+AGG | - | chr3.4:91916917-91916936 | MS.gene42628:CDS | 25.0% |
| AAAATGCTCCCATTATGAAT+AGG | - | chr3.4:91917875-91917894 | MS.gene42628:CDS | 30.0% | |
| AAATGCTCCCATTATGAATA+GGG | - | chr3.4:91917876-91917895 | MS.gene42628:CDS | 30.0% | |
| AACAGTTCTATAAACTGTTC+CGG | + | chr3.4:91916574-91916593 | None:intergenic | 30.0% | |
| AACATTCCTGAAAACGTAAT+AGG | + | chr3.4:91917528-91917547 | None:intergenic | 30.0% | |
| ACAAAAATGTTCCAATGAGA+AGG | + | chr3.4:91917097-91917116 | None:intergenic | 30.0% | |
| ACTGGAAAATACAGAGATTA+TGG | + | chr3.4:91918096-91918115 | None:intergenic | 30.0% | |
| ATATATTCTTACTTGCAGCT+AGG | + | chr3.4:91917560-91917579 | None:intergenic | 30.0% | |
| ATCTAGAGAATTAGAGATTG+TGG | + | chr3.4:91917432-91917451 | None:intergenic | 30.0% | |
| ATTACTTGTAGAGTTGTTGA+TGG | - | chr3.4:91917587-91917606 | MS.gene42628:intron | 30.0% | |
| CAAAAATGTTCCAATGAGAA+GGG | + | chr3.4:91917096-91917115 | None:intergenic | 30.0% | |
| CAAAATTATCTTGCAGCTAT+TGG | - | chr3.4:91918466-91918485 | MS.gene42628:CDS | 30.0% | |
| CAATTAAACAAGCTAGTTAC+AGG | - | chr3.4:91918181-91918200 | MS.gene42628:CDS | 30.0% | |
| CACTTAAGATAACTTGAATC+AGG | + | chr3.4:91919066-91919085 | None:intergenic | 30.0% | |
| CTAAAAGGATTCCATCAATA+GGG | + | chr3.4:91916470-91916489 | None:intergenic | 30.0% | |
| CTTCTGTAATAATTGCTGAT+CGG | + | chr3.4:91918578-91918597 | None:intergenic | 30.0% | |
| GATCAAAGAAAGATTTGACA+TGG | + | chr3.4:91917163-91917182 | None:intergenic | 30.0% | |
| TAACAGTTGAGGAACTAAAA+AGG | - | chr3.4:91916781-91916800 | MS.gene42628:intron | 30.0% | |
| TAACCATTTGCAAGATTGTA+TGG | - | chr3.4:91917657-91917676 | MS.gene42628:intron | 30.0% | |
| TATATTCTTACTTGCAGCTA+GGG | + | chr3.4:91917559-91917578 | None:intergenic | 30.0% | |
| TATTACAGAAGCCCTAATAT+GGG | - | chr3.4:91918587-91918606 | MS.gene42628:CDS | 30.0% | |
| TCTAAAAGGATTCCATCAAT+AGG | + | chr3.4:91916471-91916490 | None:intergenic | 30.0% | |
| TGTACTCCTGAAACTAAAAT+GGG | + | chr3.4:91917285-91917304 | None:intergenic | 30.0% | |
| TGTTCACCAAATCTTGATTT+GGG | + | chr3.4:91916441-91916460 | None:intergenic | 30.0% | |
| TTACAGATTGAGATTCTGTT+TGG | - | chr3.4:91918069-91918088 | MS.gene42628:CDS | 30.0% | |
| TTATTACAGAAGCCCTAATA+TGG | - | chr3.4:91918586-91918605 | MS.gene42628:CDS | 30.0% | |
| TTGTACTCCTGAAACTAAAA+TGG | + | chr3.4:91917286-91917305 | None:intergenic | 30.0% | |
| TTGTTCACCAAATCTTGATT+TGG | + | chr3.4:91916442-91916461 | None:intergenic | 30.0% | |
| ! | GACATTGTTGCTAAAGATTT+TGG | - | chr3.4:91917127-91917146 | MS.gene42628:intron | 30.0% |
| ! | GATCTTACAAGAGTTTTTCT+TGG | + | chr3.4:91916405-91916424 | None:intergenic | 30.0% |
| ! | TAGCTGCAAGATAATTTTGA+AGG | + | chr3.4:91918465-91918484 | None:intergenic | 30.0% |
| ! | TCTCATTGGAACATTTTTGT+GGG | - | chr3.4:91917097-91917116 | MS.gene42628:intron | 30.0% |
| ! | TCTTACAAGAGTTTTTCTTG+GGG | + | chr3.4:91916403-91916422 | None:intergenic | 30.0% |
| ! | TTCTCATTGGAACATTTTTG+TGG | - | chr3.4:91917096-91917115 | MS.gene42628:intron | 30.0% |
| ! | TTTGAAATGTTAGCCGAATA+TGG | + | chr3.4:91918758-91918777 | None:intergenic | 30.0% |
| !! | ATAATTGCTGATCGGTTTTA+TGG | + | chr3.4:91918570-91918589 | None:intergenic | 30.0% |
| !! | TTCATGGACTATGAAGATTT+TGG | - | chr3.4:91917379-91917398 | MS.gene42628:intron | 30.0% |
| AACTAAAAAGGACGGAGATT+TGG | - | chr3.4:91916793-91916812 | MS.gene42628:intron | 35.0% | |
| ACAGTTCTATAAACTGTTCC+GGG | + | chr3.4:91916573-91916592 | None:intergenic | 35.0% | |
| ACTGTTCCGGGTTTATTATT+CGG | + | chr3.4:91916561-91916580 | None:intergenic | 35.0% | |
| AGCAAGAGAAAGTTTCTTCA+TGG | - | chr3.4:91917363-91917382 | MS.gene42628:intron | 35.0% | |
| AGTTGAGGAACTAAAAAGGA+CGG | - | chr3.4:91916785-91916804 | MS.gene42628:intron | 35.0% | |
| ATATTCTTACTTGCAGCTAG+GGG | + | chr3.4:91917558-91917577 | None:intergenic | 35.0% | |
| CAGAAAATCTTTAGCAGCTT+GGG | - | chr3.4:91917993-91918012 | MS.gene42628:CDS | 35.0% | |
| CATTACAAACACGAAGATGA+TGG | + | chr3.4:91918344-91918363 | None:intergenic | 35.0% | |
| CTTCCATACAATCTTGCAAA+TGG | + | chr3.4:91917663-91917682 | None:intergenic | 35.0% | |
| CTTCCTTAATCAAGAACCTA+CGG | + | chr3.4:91917921-91917940 | None:intergenic | 35.0% | |
| GATTAAGGAAGAAGTTCCTT+TGG | - | chr3.4:91917930-91917949 | MS.gene42628:CDS | 35.0% | |
| GTAATGCATCCATTTGATGT+TGG | - | chr3.4:91918358-91918377 | MS.gene42628:CDS | 35.0% | |
| GTTCTTGATATACCTTCAAC+TGG | + | chr3.4:91918114-91918133 | None:intergenic | 35.0% | |
| TAAAGGTAGCACAAAGAAAG+AGG | - | chr3.4:91917310-91917329 | MS.gene42628:CDS | 35.0% | |
| TCAACTCATGATCATGATCT+TGG | + | chr3.4:91916254-91916273 | None:intergenic | 35.0% | |
| TCGATGTCCCTATTCATAAT+GGG | + | chr3.4:91917886-91917905 | None:intergenic | 35.0% | |
| TCTAAGCCCAAATCAAGATT+TGG | - | chr3.4:91916432-91916451 | MS.gene42628:intron | 35.0% | |
| TTTCTTTGTGCTACCTTTAC+TGG | + | chr3.4:91917309-91917328 | None:intergenic | 35.0% | |
| ! | AATGTATCCAGGTTTTCACT+TGG | - | chr3.4:91916967-91916986 | MS.gene42628:CDS | 35.0% |
| ! | AGATTTTGGATGGTGTAACA+TGG | - | chr3.4:91917060-91917079 | MS.gene42628:CDS | 35.0% |
| ! | CTTACTTGTGTTGATCTACT+AGG | - | chr3.4:91917633-91917652 | MS.gene42628:intron | 35.0% |
| ! | GTAAGGTTTTCATTTGTAGC+AGG | + | chr3.4:91916381-91916400 | None:intergenic | 35.0% |
| ! | TAAATTGGCCACGAAGATTT+TGG | - | chr3.4:91917046-91917065 | MS.gene42628:CDS | 35.0% |
| ! | TAGGGATGAACCTTATTTCA+GGG | + | chr3.4:91916335-91916354 | None:intergenic | 35.0% |
| ! | TCTCTGTATTTTCCAGTTGA+AGG | - | chr3.4:91918099-91918118 | MS.gene42628:CDS | 35.0% |
| !! | AGAGTTGTTGATGGTTGTAA+GGG | - | chr3.4:91917596-91917615 | MS.gene42628:intron | 35.0% |
| !! | ATGTTTTATAGATGGTGTCG+AGG | - | chr3.4:91918387-91918406 | MS.gene42628:CDS | 35.0% |
| !! | TAGAGTTGTTGATGGTTGTA+AGG | - | chr3.4:91917595-91917614 | MS.gene42628:intron | 35.0% |
| !!! | AAGGTGCTTTATTTTGTCCA+TGG | - | chr3.4:91916936-91916955 | MS.gene42628:CDS | 35.0% |
| AAAATCTTTAGCAGCTTGGG+TGG | - | chr3.4:91917996-91918015 | MS.gene42628:CDS | 40.0% | |
| AAACTAGGATGCCAGTATTG+TGG | + | chr3.4:91918844-91918863 | None:intergenic | 40.0% | |
| ACTCCGTAGGTTCTTGATTA+AGG | - | chr3.4:91917915-91917934 | MS.gene42628:CDS | 40.0% | |
| AGATACTACCTTATTCCGCA+AGG | - | chr3.4:91919018-91919037 | MS.gene42628:CDS | 40.0% | |
| AGGATTCCATCAATAGGGTA+AGG | + | chr3.4:91916465-91916484 | None:intergenic | 40.0% | |
| AGTAGTGTGGCTTCTTCTAA+TGG | - | chr3.4:91918225-91918244 | MS.gene42628:CDS | 40.0% | |
| CCAGAAAATCTTTAGCAGCT+TGG | - | chr3.4:91917992-91918011 | MS.gene42628:CDS | 40.0% | |
| CGTTCACCGAATAATAAACC+CGG | - | chr3.4:91916552-91916571 | MS.gene42628:CDS | 40.0% | |
| CTACACTGTCACCCATATTA+GGG | + | chr3.4:91918601-91918620 | None:intergenic | 40.0% | |
| CTTAAGCGACACTAAAACAG+CGG | - | chr3.4:91918153-91918172 | MS.gene42628:CDS | 40.0% | |
| GAACAACCTTACCCTATTGA+TGG | - | chr3.4:91916456-91916475 | MS.gene42628:intron | 40.0% | |
| GATGGAGAAGAAAACAGAAG+TGG | - | chr3.4:91916185-91916204 | MS.gene42628:CDS | 40.0% | |
| GCGTAAGAGACTAACAACTA+AGG | - | chr3.4:91916704-91916723 | MS.gene42628:CDS | 40.0% | |
| GGATACATTTCTTCAGTCCA+TGG | + | chr3.4:91916956-91916975 | None:intergenic | 40.0% | |
| GTCGATGTCCCTATTCATAA+TGG | + | chr3.4:91917887-91917906 | None:intergenic | 40.0% | |
| GTGGCATGTTAGTTACCAAA+TGG | - | chr3.4:91916862-91916881 | MS.gene42628:CDS | 40.0% | |
| GTGGTGGCAATTTCAAATGT+GGG | - | chr3.4:91916207-91916226 | MS.gene42628:CDS | 40.0% | |
| GTTTGTGTTTGTGTGCATCA+CGG | - | chr3.4:91916740-91916759 | MS.gene42628:intron | 40.0% | |
| TACACCATCCAAAATCTTCG+TGG | + | chr3.4:91917057-91917076 | None:intergenic | 40.0% | |
| TAGAAGAAGCCACACTACTA+TGG | + | chr3.4:91918224-91918243 | None:intergenic | 40.0% | |
| TAGTTTCAGTTTGGCAGTGA+AGG | - | chr3.4:91918858-91918877 | MS.gene42628:CDS | 40.0% | |
| TCTACACTGTCACCCATATT+AGG | + | chr3.4:91918602-91918621 | None:intergenic | 40.0% | |
| TGGACTGAAGAAATGTATCC+AGG | - | chr3.4:91916956-91916975 | MS.gene42628:CDS | 40.0% | |
| TGGAGTCGAACGATCTAAAT+TGG | - | chr3.4:91917031-91917050 | MS.gene42628:CDS | 40.0% | |
| TTCACTGCCAAACTGAAACT+AGG | + | chr3.4:91918859-91918878 | None:intergenic | 40.0% | |
| TTTATGGCTAGGACAGAGTT+TGG | + | chr3.4:91918554-91918573 | None:intergenic | 40.0% | |
| TTTGTGTTTGTGTGCATCAC+GGG | - | chr3.4:91916741-91916760 | MS.gene42628:intron | 40.0% | |
| ! | ACTCTTGTTTCCCTTCTCAT+TGG | - | chr3.4:91917083-91917102 | MS.gene42628:CDS | 40.0% |
| ! | AGGGATGAACCTTATTTCAG+GGG | + | chr3.4:91916334-91916353 | None:intergenic | 40.0% |
| ! | ATTTGTAGCAGGAGCTTTTG+GGG | + | chr3.4:91916370-91916389 | None:intergenic | 40.0% |
| ! | CAAGAGTTTTTCTTGGGGTA+AGG | + | chr3.4:91916398-91916417 | None:intergenic | 40.0% |
| ! | CATTTGTAGCAGGAGCTTTT+GGG | + | chr3.4:91916371-91916390 | None:intergenic | 40.0% |
| ! | CCAAGCTGCTAAAGATTTTC+TGG | + | chr3.4:91917995-91918014 | None:intergenic | 40.0% |
| ! | CTAGGGATGAACCTTATTTC+AGG | + | chr3.4:91916336-91916355 | None:intergenic | 40.0% |
| ! | GGCGATCGATGTTTTATAGA+TGG | - | chr3.4:91918379-91918398 | MS.gene42628:CDS | 40.0% |
| ! | GGTTTATTATTCGGTGAACG+TGG | + | chr3.4:91916552-91916571 | None:intergenic | 40.0% |
| ! | TCATTTGTAGCAGGAGCTTT+TGG | + | chr3.4:91916372-91916391 | None:intergenic | 40.0% |
| ! | TGGGTGCTTTTAATCAATCG+TGG | - | chr3.4:91917011-91917030 | MS.gene42628:CDS | 40.0% |
| ! | TTCAGGAGTACAACCAGTAA+AGG | - | chr3.4:91917293-91917312 | MS.gene42628:CDS | 40.0% |
| !! | CTTGTGATGGTGACATTTTG+TGG | - | chr3.4:91916843-91916862 | MS.gene42628:CDS | 40.0% |
| !! | GAGCTTTTGGGGGTTTATTT+GGG | + | chr3.4:91916359-91916378 | None:intergenic | 40.0% |
| !! | GTACTTGCTGCTTTCATGTT+TGG | - | chr3.4:91918292-91918311 | MS.gene42628:CDS | 40.0% |
| !! | GTTGGCTAGTTTAACAGTTG+AGG | - | chr3.4:91916770-91916789 | MS.gene42628:intron | 40.0% |
| !!! | GCACTTCCCATTTTAGTTTC+AGG | - | chr3.4:91917276-91917295 | MS.gene42628:CDS | 40.0% |
| AAGCGATCCAAGTGAAAACC+TGG | + | chr3.4:91916977-91916996 | None:intergenic | 45.0% | |
| AATTTGGGGAGAAGACCAAG+CGG | - | chr3.4:91918944-91918963 | MS.gene42628:CDS | 45.0% | |
| ACGACGTCAGCAGAGAAAAT+CGG | - | chr3.4:91918638-91918657 | MS.gene42628:CDS | 45.0% | |
| ACTCGACTGTTGGCCATATT+CGG | - | chr3.4:91918742-91918761 | MS.gene42628:CDS | 45.0% | |
| ACTGTGCTTCCCCTGAAATA+AGG | - | chr3.4:91916322-91916341 | MS.gene42628:CDS | 45.0% | |
| AGCAGTTGCTTCCATCTCAT+TGG | + | chr3.4:91917501-91917520 | None:intergenic | 45.0% | |
| AGGTGTTCATCTCAGACACA+TGG | - | chr3.4:91919038-91919057 | MS.gene42628:CDS | 45.0% | |
| AGTTACAGGAGTCCTAGTAG+TGG | - | chr3.4:91918195-91918214 | MS.gene42628:CDS | 45.0% | |
| ATATGGCCAACAGTCGAGTT+AGG | + | chr3.4:91918741-91918760 | None:intergenic | 45.0% | |
| ATGGAAGAGGCTGAGAAAGT+CGG | - | chr3.4:91917242-91917261 | MS.gene42628:CDS | 45.0% | |
| ATGTTCTGCAGACTCTCTCT+GGG | - | chr3.4:91917210-91917229 | MS.gene42628:CDS | 45.0% | |
| CACTAATTCACTTCTCCGCT+TGG | + | chr3.4:91918962-91918981 | None:intergenic | 45.0% | |
| CACTCCTAGAACACCTTTGA+TGG | - | chr3.4:91916611-91916630 | MS.gene42628:CDS | 45.0% | |
| CATCGATCGCCAACATCAAA+TGG | + | chr3.4:91918370-91918389 | None:intergenic | 45.0% | |
| CATGATCATGATCTTGGCCA+TGG | + | chr3.4:91916248-91916267 | None:intergenic | 45.0% | |
| CTACTATGGTCACCACTACT+AGG | + | chr3.4:91918210-91918229 | None:intergenic | 45.0% | |
| CTGGCATCCTAGTTTCAGTT+TGG | - | chr3.4:91918849-91918868 | MS.gene42628:CDS | 45.0% | |
| GAAGAAAACAGAAGTGGTGG+TGG | - | chr3.4:91916191-91916210 | MS.gene42628:CDS | 45.0% | |
| GACAATGTGCGTGAACCATT+TGG | + | chr3.4:91916880-91916899 | None:intergenic | 45.0% | |
| GAGTCTGCAGAACATACTGA+TGG | + | chr3.4:91917205-91917224 | None:intergenic | 45.0% | |
| GATGAACACCTTGCGGAATA+AGG | + | chr3.4:91919029-91919048 | None:intergenic | 45.0% | |
| GCGGAGAAGTGAATTAGTGA+TGG | - | chr3.4:91918963-91918982 | MS.gene42628:CDS | 45.0% | |
| GGAGAAGAAAACAGAAGTGG+TGG | - | chr3.4:91916188-91916207 | MS.gene42628:CDS | 45.0% | |
| GGTGAACGTGGTGCTTTATA+TGG | + | chr3.4:91916540-91916559 | None:intergenic | 45.0% | |
| GGTGACTTTGTAGAGTAACG+AGG | + | chr3.4:91916294-91916313 | None:intergenic | 45.0% | |
| GTGGCAATTTCAAATGTGGG+TGG | - | chr3.4:91916210-91916229 | MS.gene42628:CDS | 45.0% | |
| TAGATGCAGTGATGAACTCG+AGG | - | chr3.4:91917402-91917421 | MS.gene42628:intron | 45.0% | |
| TAGTGGTGACCATAGTAGTG+TGG | - | chr3.4:91918212-91918231 | MS.gene42628:CDS | 45.0% | |
| TATGAATAGGGACATCGACG+AGG | - | chr3.4:91917888-91917907 | MS.gene42628:CDS | 45.0% | |
| TATGGCCAACAGTCGAGTTA+GGG | + | chr3.4:91918740-91918759 | None:intergenic | 45.0% | |
| TATGTTCTGCAGACTCTCTC+TGG | - | chr3.4:91917209-91917228 | MS.gene42628:intron | 45.0% | |
| TCCTTTGGTATTTCCCCTAC+TGG | - | chr3.4:91917945-91917964 | MS.gene42628:CDS | 45.0% | |
| TGGAGAGGAATCCACAATAC+TGG | - | chr3.4:91918830-91918849 | MS.gene42628:CDS | 45.0% | |
| TTCTCAGCCTCTTCCATTAG+TGG | + | chr3.4:91917239-91917258 | None:intergenic | 45.0% | |
| TTGGGGGTTTATTTGGGCTA+GGG | + | chr3.4:91916353-91916372 | None:intergenic | 45.0% | |
| TTTGGGGGTTTATTTGGGCT+AGG | + | chr3.4:91916354-91916373 | None:intergenic | 45.0% | |
| ! | AAGGACGGAGATTTGGAGTT+TGG | - | chr3.4:91916800-91916819 | MS.gene42628:intron | 45.0% |
| ! | AGATTTGGAGTTTGGGGCTT+TGG | - | chr3.4:91916808-91916827 | MS.gene42628:intron | 45.0% |
| ! | AGGACGGAGATTTGGAGTTT+GGG | - | chr3.4:91916801-91916820 | MS.gene42628:intron | 45.0% |
| ! | CTGCTGCCTATTACGTTTTC+AGG | - | chr3.4:91917519-91917538 | MS.gene42628:intron | 45.0% |
| ! | GATGGTTGTAAGGGCATGTT+TGG | - | chr3.4:91917605-91917624 | MS.gene42628:intron | 45.0% |
| ! | GGTGGTGGCAATTTCAAATG+TGG | - | chr3.4:91916206-91916225 | MS.gene42628:CDS | 45.0% |
| ! | GGTTTTCACTTGGATCGCTT+TGG | - | chr3.4:91916977-91916996 | MS.gene42628:CDS | 45.0% |
| ! | TCAGGGGAAGCACAGTTTAA+AGG | + | chr3.4:91916318-91916337 | None:intergenic | 45.0% |
| ! | TGTCTGAGATGAACACCTTG+CGG | + | chr3.4:91919036-91919055 | None:intergenic | 45.0% |
| ! | TTGGCCACGAAGATTTTGGA+TGG | - | chr3.4:91917050-91917069 | MS.gene42628:CDS | 45.0% |
| ! | TTTGTAGCAGGAGCTTTTGG+GGG | + | chr3.4:91916369-91916388 | None:intergenic | 45.0% |
| !! | CGCTTTGGTTCTACTCACAT+GGG | - | chr3.4:91916992-91917011 | MS.gene42628:CDS | 45.0% |
| !! | GATGCCATCAAAGGTGTTCT+AGG | + | chr3.4:91916618-91916637 | None:intergenic | 45.0% |
| !! | GGAGCTTTTGGGGGTTTATT+TGG | + | chr3.4:91916360-91916379 | None:intergenic | 45.0% |
| !! | TCGCTTTGGTTCTACTCACA+TGG | - | chr3.4:91916991-91917010 | MS.gene42628:CDS | 45.0% |
| !! | TGCTGATCGGTTTTATGGCT+AGG | + | chr3.4:91918565-91918584 | None:intergenic | 45.0% |
| !!! | CGCTGTTTTAGTGTCGCTTA+AGG | + | chr3.4:91918155-91918174 | None:intergenic | 45.0% |
| AGGTGGTGAAGTGAGCATGA+TGG | - | chr3.4:91916167-91916186 | MS.gene42628:CDS | 50.0% | |
| ATGGCCAACAGTCGAGTTAG+GGG | + | chr3.4:91918739-91918758 | None:intergenic | 50.0% | |
| CAAGTACTAGCTGCGATGAG+AGG | + | chr3.4:91918279-91918298 | None:intergenic | 50.0% | |
| CATGATCTTGGCCATGGTGA+TGG | + | chr3.4:91916242-91916261 | None:intergenic | 50.0% | |
| CTTTAGCAGCTTGGGTGGTA+AGG | - | chr3.4:91918001-91918020 | MS.gene42628:CDS | 50.0% | |
| GAGGTGGTGTATGCTTGTGA+TGG | - | chr3.4:91916830-91916849 | MS.gene42628:CDS | 50.0% | |
| GCCAGTAGGGGAAATACCAA+AGG | + | chr3.4:91917949-91917968 | None:intergenic | 50.0% | |
| GGTGGAGATAACCATCACCA+TGG | - | chr3.4:91916228-91916247 | MS.gene42628:CDS | 50.0% | |
| TACTGGCACAGGCAGAAACA+GGG | - | chr3.4:91917962-91917981 | MS.gene42628:CDS | 50.0% | |
| TCAGCCTCTTCCATTAGTGG+AGG | + | chr3.4:91917236-91917255 | None:intergenic | 50.0% | |
| ! | ACACCTTTGATGGCATCTCC+AGG | - | chr3.4:91916621-91916640 | MS.gene42628:CDS | 50.0% |
| ! | GGACGGAGATTTGGAGTTTG+GGG | - | chr3.4:91916802-91916821 | MS.gene42628:intron | 50.0% |
| ! | GGGGAAGCACAGTTTAAAGG+TGG | + | chr3.4:91916315-91916334 | None:intergenic | 50.0% |
| ! | TGTTTCTGCCTGTGCCAGTA+GGG | + | chr3.4:91917962-91917981 | None:intergenic | 50.0% |
| ! | TTTGGAGTTTGGGGCTTTGG+AGG | - | chr3.4:91916811-91916830 | MS.gene42628:intron | 50.0% |
| CTACTGGCACAGGCAGAAAC+AGG | - | chr3.4:91917961-91917980 | MS.gene42628:CDS | 55.0% | |
| CTCACCCCTAACTCGACTGT+TGG | - | chr3.4:91918732-91918751 | MS.gene42628:CDS | 55.0% | |
| GAAGAGGCTGAGAAAGTCGG+CGG | - | chr3.4:91917245-91917264 | MS.gene42628:CDS | 55.0% | |
| GGACCTGGAGATGCCATCAA+AGG | + | chr3.4:91916627-91916646 | None:intergenic | 55.0% | |
| GGTATTTCCCCTACTGGCAC+AGG | - | chr3.4:91917951-91917970 | MS.gene42628:CDS | 55.0% | |
| GTTTCTGCCTGTGCCAGTAG+GGG | + | chr3.4:91917961-91917980 | None:intergenic | 55.0% | |
| TCATCAGGATCCTCACCAGC+TGG | + | chr3.4:91916648-91916667 | None:intergenic | 55.0% | |
| TCGACGAGGATGAACTCCGT+AGG | - | chr3.4:91917902-91917921 | MS.gene42628:CDS | 55.0% | |
| TCTCTCTGGGCCTCCACTAA+TGG | - | chr3.4:91917223-91917242 | MS.gene42628:CDS | 55.0% | |
| TGGGCCTCCACTAATGGAAG+AGG | - | chr3.4:91917229-91917248 | MS.gene42628:CDS | 55.0% | |
| ! | GTGCATCACGGGTAGCTTGT+TGG | - | chr3.4:91916752-91916771 | MS.gene42628:intron | 55.0% |
| !! | CTGTTTCTGCCTGTGCCAGT+AGG | + | chr3.4:91917963-91917982 | None:intergenic | 55.0% |
| ATCTCCAGGTCCAGCTGGTG+AGG | - | chr3.4:91916635-91916654 | MS.gene42628:CDS | 60.0% | |
| ATGGCATCTCCAGGTCCAGC+TGG | - | chr3.4:91916630-91916649 | MS.gene42628:CDS | 60.0% | |
| !! | GGAGTTTGGGGCTTTGGAGG+TGG | - | chr3.4:91916814-91916833 | MS.gene42628:intron | 60.0% |
| GGATCCTCACCAGCTGGACC+TGG | + | chr3.4:91916642-91916661 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 91916141 | 91919086 | 91916141 | ID=MS.gene42628 |
| chr3.4 | mRNA | 91916141 | 91919086 | 91916141 | ID=MS.gene42628.t1;Parent=MS.gene42628 |
| chr3.4 | exon | 91917660 | 91919086 | 91917660 | ID=MS.gene42628.t1.exon1;Parent=MS.gene42628.t1 |
| chr3.4 | CDS | 91917660 | 91919086 | 91917660 | ID=cds.MS.gene42628.t1;Parent=MS.gene42628.t1 |
| chr3.4 | exon | 91917210 | 91917330 | 91917210 | ID=MS.gene42628.t1.exon2;Parent=MS.gene42628.t1 |
| chr3.4 | CDS | 91917210 | 91917330 | 91917210 | ID=cds.MS.gene42628.t1;Parent=MS.gene42628.t1 |
| chr3.4 | exon | 91916819 | 91917112 | 91916819 | ID=MS.gene42628.t1.exon3;Parent=MS.gene42628.t1 |
| chr3.4 | CDS | 91916819 | 91917112 | 91916819 | ID=cds.MS.gene42628.t1;Parent=MS.gene42628.t1 |
| chr3.4 | exon | 91916543 | 91916745 | 91916543 | ID=MS.gene42628.t1.exon4;Parent=MS.gene42628.t1 |
| chr3.4 | CDS | 91916543 | 91916745 | 91916543 | ID=cds.MS.gene42628.t1;Parent=MS.gene42628.t1 |
| chr3.4 | exon | 91916141 | 91916402 | 91916141 | ID=MS.gene42628.t1.exon5;Parent=MS.gene42628.t1 |
| chr3.4 | CDS | 91916141 | 91916402 | 91916141 | ID=cds.MS.gene42628.t1;Parent=MS.gene42628.t1 |
| Gene Sequence |
| Protein sequence |
