Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062410.t1 | XP_003603195.2 | 94.4 | 750 | 41 | 1 | 1 | 750 | 1 | 749 | 0.00E+00 | 1362.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062410.t1 | Q9LYG9 | 55.5 | 685 | 295 | 8 | 63 | 739 | 48 | 730 | 2.1e-196 | 687.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062410.t1 | G7J8D9 | 94.4 | 750 | 41 | 1 | 1 | 750 | 1 | 749 | 0.0e+00 | 1362.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene32773 | MS.gene062410 | PPI |
| MS.gene42681 | MS.gene062410 | PPI |
| MS.gene062410 | MS.gene014978 | PPI |
| MS.gene062410 | MS.gene42688 | PPI |
| MS.gene062410 | MS.gene74110 | PPI |
| MS.gene062410 | MS.gene014973 | PPI |
| MS.gene062410 | MS.gene97525 | PPI |
| MS.gene42686 | MS.gene062410 | PPI |
| MS.gene062410 | MS.gene42620 | PPI |
| MS.gene32764 | MS.gene062410 | PPI |
| MS.gene062410 | MS.gene014981 | PPI |
| MS.gene42622 | MS.gene062410 | PPI |
| MS.gene32770 | MS.gene062410 | PPI |
| MS.gene062410 | MS.gene42628 | PPI |
| MS.gene062410 | MS.gene42686 | PPI |
| MS.gene42620 | MS.gene062410 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062410.t1 | MTR_3g104920 | 94.400 | 750 | 41 | 1 | 1 | 750 | 1 | 749 | 0.0 | 1432 |
| MS.gene062410.t1 | MTR_3g104920 | 94.573 | 737 | 40 | 0 | 14 | 750 | 1 | 737 | 0.0 | 1413 |
| MS.gene062410.t1 | MTR_3g104990 | 79.560 | 773 | 133 | 5 | 1 | 750 | 1 | 771 | 0.0 | 1202 |
| MS.gene062410.t1 | MTR_3g104940 | 77.907 | 774 | 145 | 3 | 1 | 750 | 1 | 772 | 0.0 | 1170 |
| MS.gene062410.t1 | MTR_2g041220 | 48.168 | 764 | 338 | 17 | 11 | 739 | 5 | 745 | 0.0 | 656 |
| MS.gene062410.t1 | MTR_8g071250 | 42.793 | 666 | 342 | 12 | 89 | 739 | 47 | 688 | 5.45e-163 | 488 |
| MS.gene062410.t1 | MTR_1g113850 | 38.579 | 718 | 359 | 16 | 82 | 748 | 229 | 915 | 8.67e-147 | 453 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062410.t1 | AT5G12080 | 56.497 | 708 | 283 | 10 | 50 | 739 | 30 | 730 | 0.0 | 785 |
| MS.gene062410.t1 | AT5G12080 | 56.497 | 708 | 283 | 10 | 50 | 739 | 30 | 730 | 0.0 | 785 |
| MS.gene062410.t1 | AT5G12080 | 56.497 | 708 | 283 | 10 | 50 | 739 | 30 | 730 | 0.0 | 785 |
| MS.gene062410.t1 | AT5G19520 | 51.804 | 693 | 316 | 8 | 59 | 739 | 52 | 738 | 0.0 | 705 |
| MS.gene062410.t1 | AT5G19520 | 51.804 | 693 | 316 | 8 | 59 | 739 | 52 | 738 | 0.0 | 705 |
| MS.gene062410.t1 | AT2G17010 | 38.379 | 654 | 363 | 8 | 122 | 740 | 240 | 888 | 1.56e-150 | 462 |
| MS.gene062410.t1 | AT1G53470 | 40.161 | 620 | 322 | 10 | 170 | 746 | 251 | 864 | 2.11e-145 | 448 |
| MS.gene062410.t1 | AT3G14810 | 38.784 | 691 | 359 | 13 | 97 | 744 | 192 | 861 | 2.23e-145 | 448 |
| MS.gene062410.t1 | AT1G78610 | 40.348 | 632 | 341 | 6 | 147 | 747 | 211 | 837 | 2.59e-145 | 447 |
| MS.gene062410.t1 | AT2G17000 | 39.804 | 613 | 329 | 9 | 170 | 748 | 223 | 829 | 1.48e-135 | 421 |
| MS.gene062410.t1 | AT2G17000 | 39.804 | 613 | 329 | 9 | 170 | 748 | 223 | 829 | 2.98e-135 | 421 |
| MS.gene062410.t1 | AT3G14810 | 36.403 | 695 | 335 | 15 | 97 | 744 | 192 | 826 | 2.26e-126 | 397 |
| MS.gene062410.t1 | AT2G17010 | 35.989 | 364 | 196 | 8 | 173 | 505 | 295 | 652 | 2.54e-62 | 221 |
Find 152 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATACTTTCTACCATATT+TGG | 0.076614 | 7.3:+74957893 | None:intergenic |
| GACACTGTTGCTATCAATTT+TGG | 0.133228 | 7.3:-74959371 | MS.gene062410:CDS |
| TTCACCTAGAACACCTTTAA+TGG | 0.166704 | 7.3:-74959890 | MS.gene062410:CDS |
| AGGATACATATTTGGAGTTT+AGG | 0.218904 | 7.3:-74959697 | MS.gene062410:CDS |
| ACAATGAACTTTCAAGAGTT+TGG | 0.224035 | 7.3:-74957598 | MS.gene062410:CDS |
| CAGCTGTTACTTCACCTTAT+AGG | 0.232327 | 7.3:-74959921 | MS.gene062410:CDS |
| AAGTAACATTCTCTTCTAAA+AGG | 0.242883 | 7.3:+74959965 | None:intergenic |
| ATGACACCAGCAGAGAAAAT+TGG | 0.272110 | 7.3:-74957854 | MS.gene062410:CDS |
| GCATCTCCAGGTTCTTCTTC+TGG | 0.277547 | 7.3:-74959868 | MS.gene062410:CDS |
| GGATACATATTTGGAGTTTA+GGG | 0.285104 | 7.3:-74959696 | MS.gene062410:CDS |
| TTGTTCTACAAACCTTGATT+TGG | 0.285408 | 7.3:+74960008 | None:intergenic |
| CAATGAACTTTCAAGAGTTT+GGG | 0.286227 | 7.3:-74957597 | MS.gene062410:CDS |
| AACTGAGAAGGATACATATT+TGG | 0.299045 | 7.3:-74959705 | MS.gene062410:CDS |
| TTCGGGAGTTCAACTGTTAA+AGG | 0.302616 | 7.3:-74959205 | MS.gene062410:CDS |
| ATTACTACCAAGCTGAAATT+AGG | 0.311064 | 7.3:+74957670 | None:intergenic |
| GGAGTTTAGGGCTTTGGAGG+TGG | 0.320866 | 7.3:-74959684 | MS.gene062410:CDS |
| TCTAAAAGGGTCTCATCAAT+AGG | 0.325584 | 7.3:+74959979 | None:intergenic |
| CTATACTTTCTACCATATTT+GGG | 0.329682 | 7.3:+74957894 | None:intergenic |
| ATATTTGGAGTTTAGGGCTT+TGG | 0.330737 | 7.3:-74959690 | MS.gene062410:CDS |
| GAGTTTAGGGCTTTGGAGGT+GGG | 0.335496 | 7.3:-74959683 | MS.gene062410:CDS |
| CATTTGAGAGAACTTGTATC+AGG | 0.336074 | 7.3:+74957463 | None:intergenic |
| TCTCTCCGGGCCTCCACTAA+TGG | 0.337430 | 7.3:-74959275 | MS.gene062410:CDS |
| ACTCCGTAGATTCATGATTA+AGG | 0.340419 | 7.3:-74958566 | MS.gene062410:CDS |
| ACTCTTGTTTCCCTTCTCAT+TGG | 0.349071 | 7.3:-74959415 | MS.gene062410:CDS |
| TTCCCATCCTCTTCCATTAG+TGG | 0.352581 | 7.3:+74959262 | None:intergenic |
| GTACTAGCGGGGTTCATGTT+TGG | 0.355463 | 7.3:-74958199 | MS.gene062410:CDS |
| GAACCTGGAGATGCCATTAA+AGG | 0.366672 | 7.3:+74959877 | None:intergenic |
| AACATTCTTGAAAACATAAT+AGG | 0.371862 | 7.3:+74958973 | None:intergenic |
| TAGTCGCTAGTCTCTTATGC+TGG | 0.373434 | 7.3:+74959797 | None:intergenic |
| TGTTCTACAAACCTTGATTT+GGG | 0.374332 | 7.3:+74960009 | None:intergenic |
| GCTTAGAATACACTGATCTT+AGG | 0.375626 | 7.3:+74960031 | None:intergenic |
| CTTCTGTAATAATTGCTAAT+CGG | 0.375974 | 7.3:+74957917 | None:intergenic |
| AGTAGTGTGGCTTCTTCTAA+TGG | 0.385108 | 7.3:-74958266 | MS.gene062410:CDS |
| TGCATCTACCAAAATCTTCA+TGG | 0.385620 | 7.3:+74959111 | None:intergenic |
| CTACTGGCCCAGGCAGATAC+AGG | 0.387614 | 7.3:-74958520 | MS.gene062410:CDS |
| TCAGTTTGGTTCTCCTTACA+TGG | 0.394428 | 7.3:-74959507 | MS.gene062410:CDS |
| GGTGAATAAGAGTTCCTATA+AGG | 0.395222 | 7.3:+74959907 | None:intergenic |
| TCAACCCATGATCATGATCT+TGG | 0.398144 | 7.3:+74960199 | None:intergenic |
| TTATTACAGAAGCCCAAATA+TGG | 0.398155 | 7.3:-74957906 | MS.gene062410:CDS |
| AGAGAAAGAGGTTATTGATA+TGG | 0.399291 | 7.3:-74959176 | MS.gene062410:CDS |
| TAATTAGCCCTGTATCTGCC+TGG | 0.406972 | 7.3:+74958512 | None:intergenic |
| GATGCCATTAAAGGTGTTCT+AGG | 0.410220 | 7.3:+74959886 | None:intergenic |
| CATTTGTAGCAGGAACTTGT+GGG | 0.411786 | 7.3:+74960079 | None:intergenic |
| AGTTTAGGGCTTTGGAGGTG+GGG | 0.414583 | 7.3:-74959682 | MS.gene062410:CDS |
| ATCCTGACGAAATCATTTAT+AGG | 0.416707 | 7.3:-74959840 | MS.gene062410:CDS |
| CGCGTGGACCATGAAGATTT+TGG | 0.419825 | 7.3:-74959119 | MS.gene062410:CDS |
| TGCCTATAAATGATTTCGTC+AGG | 0.429312 | 7.3:+74959838 | None:intergenic |
| AACAATGTGCATGAACCATT+TGG | 0.430283 | 7.3:+74959621 | None:intergenic |
| TTAGTGGCGAGGACATAGTT+TGG | 0.433932 | 7.3:+74957941 | None:intergenic |
| TTTGGAGTTTAGGGCTTTGG+AGG | 0.436552 | 7.3:-74959687 | MS.gene062410:CDS |
| TATGTTCTGCAGACTCTCTC+CGG | 0.438869 | 7.3:-74959289 | MS.gene062410:CDS |
| GAGTCTGCAGAACATATTGA+TGG | 0.441671 | 7.3:+74959296 | None:intergenic |
| TCATTTGTAGCAGGAACTTG+TGG | 0.446523 | 7.3:+74960078 | None:intergenic |
| ATAATTGCTAATCGGTTTAG+TGG | 0.448242 | 7.3:+74957925 | None:intergenic |
| TTGGCTTGTTAGTTACCAAA+TGG | 0.451486 | 7.3:-74959636 | MS.gene062410:CDS |
| ATCAAGTGAATTAGAGATTG+TGG | 0.457488 | 7.3:+74959069 | None:intergenic |
| CTAAAAGGGTCTCATCAATA+GGG | 0.461269 | 7.3:+74959980 | None:intergenic |
| CTGTATCTGCCTGGGCCAGT+AGG | 0.461653 | 7.3:+74958521 | None:intergenic |
| CTTGAAGCTTAACAATGAAA+AGG | 0.463463 | 7.3:-74957972 | MS.gene062410:CDS |
| GGCGATCGATGTGTTGTAGA+TGG | 0.464642 | 7.3:-74958112 | MS.gene062410:CDS |
| GGTAGAAAGTATAGAGTTCT+CGG | 0.466694 | 7.3:-74957885 | MS.gene062410:CDS |
| GTGTGTCGTGGGTATCTTGT+TGG | 0.466820 | 7.3:-74959746 | MS.gene062410:CDS |
| CAGAGAGGAATCCACAATAC+TGG | 0.467099 | 7.3:-74957696 | MS.gene062410:CDS |
| CAGATACAGCCTTCTTCCAC+AGG | 0.477668 | 7.3:-74957509 | MS.gene062410:CDS |
| ATGGAAGAGGATGGGAAAAT+CGG | 0.482591 | 7.3:-74959256 | MS.gene062410:CDS |
| AGTAACATTCTCTTCTAAAA+GGG | 0.484065 | 7.3:+74959966 | None:intergenic |
| CTCTTCCATTAGTGGAGGCC+CGG | 0.484425 | 7.3:+74959270 | None:intergenic |
| GCATAAGAGACTAGCGACTA+AGG | 0.484574 | 7.3:-74959794 | MS.gene062410:CDS |
| CAATTAAACAAGGTTGTGAC+AGG | 0.487725 | 7.3:-74958310 | MS.gene062410:CDS |
| CATGACCAAGATCATGATCA+TGG | 0.492732 | 7.3:-74960204 | MS.gene062410:CDS |
| GAGGTGGGGTATGCTTGTGA+TGG | 0.494249 | 7.3:-74959668 | MS.gene062410:CDS |
| CTTCCTTAATCATGAATCTA+CGG | 0.496022 | 7.3:+74958563 | None:intergenic |
| AAATGTAAATAAGATTAAGA+TGG | 0.497083 | 7.3:-74957638 | MS.gene062410:CDS |
| AGTCGCTAGTCTCTTATGCT+GGG | 0.498583 | 7.3:+74959798 | None:intergenic |
| TTGCGGCTAATTTAGATCGC+TGG | 0.498595 | 7.3:+74959461 | None:intergenic |
| TCCAGGTTCTTCTTCTGGTG+AGG | 0.503770 | 7.3:-74959863 | MS.gene062410:CDS |
| CATCGATCGCCAACATCGAA+TGG | 0.504479 | 7.3:+74958124 | None:intergenic |
| AGTTTGGGGAGAAGCTGAAT+CGG | 0.505424 | 7.3:-74957582 | MS.gene062410:CDS |
| AATGTAAATAAGATTAAGAT+GGG | 0.505449 | 7.3:-74957637 | MS.gene062410:CDS |
| TTCATGTTTGTGTGTGTCGT+GGG | 0.518234 | 7.3:-74959757 | MS.gene062410:CDS |
| TTGAACTCCCGAAACTAAAA+CGG | 0.519838 | 7.3:+74959215 | None:intergenic |
| CATTACAAACACAAAGATGA+TGG | 0.521560 | 7.3:+74958150 | None:intergenic |
| CTATATTCTTACTTGCAACA+AGG | 0.521854 | 7.3:+74958941 | None:intergenic |
| TGGGTTGAAGCAATGTGTCC+AGG | 0.522262 | 7.3:-74959542 | MS.gene062410:CDS |
| TGTATTCTAAGCCCAAATCA+AGG | 0.522553 | 7.3:-74960020 | MS.gene062410:CDS |
| CTTGGGGTGAAACTTATCTC+AGG | 0.525300 | 7.3:+74960114 | None:intergenic |
| ATCGGCAGATCTCAAAGTAT+TGG | 0.525382 | 7.3:-74959238 | MS.gene062410:CDS |
| TCATCACAGCTAGTACTAGC+GGG | 0.526862 | 7.3:-74958211 | MS.gene062410:CDS |
| AAATTAGGATGCCAGTATTG+TGG | 0.533187 | 7.3:+74957685 | None:intergenic |
| TGATAAATAGTACCCATGTA+AGG | 0.534123 | 7.3:+74959494 | None:intergenic |
| TCGGAGAAGTGAACTAGTGA+TGG | 0.536390 | 7.3:-74957563 | MS.gene062410:CDS |
| CCATCCTCTTCCATTAGTGG+AGG | 0.537252 | 7.3:+74959265 | None:intergenic |
| TCCTCACCAGAAGAAGAACC+TGG | 0.538196 | 7.3:+74959862 | None:intergenic |
| CGGGCCTCCACTAATGGAAG+AGG | 0.539056 | 7.3:-74959269 | MS.gene062410:CDS |
| ACACCTTTAATGGCATCTCC+AGG | 0.542913 | 7.3:-74959880 | MS.gene062410:CDS |
| TGTATCTGCCTGGGCCAGTA+GGG | 0.543733 | 7.3:+74958522 | None:intergenic |
| TAAAGCAATTACTAATGAGA+TGG | 0.545783 | 7.3:-74959011 | MS.gene062410:CDS |
| GATGAACACCCTGTGGAAGA+AGG | 0.550548 | 7.3:+74957500 | None:intergenic |
| AACTGATCCAAATGAAAACC+TGG | 0.550631 | 7.3:+74959524 | None:intergenic |
| GTTCATGTTTGTGTGTGTCG+TGG | 0.551999 | 7.3:-74959758 | MS.gene062410:CDS |
| GGACACATTGCTTCAACCCA+TGG | 0.552760 | 7.3:+74959545 | None:intergenic |
| AATTAGCCCTGTATCTGCCT+GGG | 0.553573 | 7.3:+74958513 | None:intergenic |
| ATGTTCTGCAGACTCTCTCC+GGG | 0.553700 | 7.3:-74959288 | MS.gene062410:CDS |
| GCCAGTAGGGAAAATACAAA+AGG | 0.553711 | 7.3:+74958535 | None:intergenic |
| CAGTTTGGTTCTCCTTACAT+GGG | 0.553964 | 7.3:-74959506 | MS.gene062410:CDS |
| TGCTAATCGGTTTAGTGGCG+AGG | 0.555030 | 7.3:+74957930 | None:intergenic |
| CTGGCATCCTAATTTCAGCT+TGG | 0.555043 | 7.3:-74957677 | MS.gene062410:CDS |
| GTTGGCTAGCTTAACAGTTG+AGG | 0.556372 | 7.3:-74959728 | MS.gene062410:CDS |
| ATTTGTAGCAGGAACTTGTG+GGG | 0.558637 | 7.3:+74960080 | None:intergenic |
| TAAAGGTGGCACAGAGAAAG+AGG | 0.562858 | 7.3:-74959188 | MS.gene062410:CDS |
| GTAATGCATCCATTCGATGT+TGG | 0.562974 | 7.3:-74958133 | MS.gene062410:CDS |
| CCTCCACTAATGGAAGAGGA+TGG | 0.567888 | 7.3:-74959265 | MS.gene062410:CDS |
| TATATTCTTACTTGCAACAA+GGG | 0.569030 | 7.3:+74958942 | None:intergenic |
| TAGATGCAGTGATGAATTCA+AGG | 0.569731 | 7.3:-74959096 | MS.gene062410:CDS |
| CATGATCATGATCTTGGTCA+TGG | 0.572577 | 7.3:+74960205 | None:intergenic |
| CTCCACTAATGGAAGAGGAT+GGG | 0.574488 | 7.3:-74959264 | MS.gene062410:CDS |
| TTTGTAGCAGGAACTTGTGG+GGG | 0.574718 | 7.3:+74960081 | None:intergenic |
| AGGTGGTGAAGTAAACATGA+TGG | 0.584745 | 7.3:-74960280 | MS.gene062410:CDS |
| TTATCAAGAATGTAAAGCAC+TGG | 0.590796 | 7.3:-74958368 | MS.gene062410:CDS |
| GGAGAAGAAAAGAGAAGTCG+TGG | 0.591078 | 7.3:-74960259 | MS.gene062410:CDS |
| TGCTTAGGTTGATGAATGGA+TGG | 0.602228 | 7.3:-74960318 | None:intergenic |
| GATCAAAGAAAGATTTGACA+TGG | 0.605754 | 7.3:+74959338 | None:intergenic |
| GGTTTCTGAATGATGTAACA+TGG | 0.606401 | 7.3:-74959438 | MS.gene062410:CDS |
| AAAGTCTTTAGCAGATTGGG+TGG | 0.609117 | 7.3:-74958485 | MS.gene062410:intron |
| CTCATCACAGCTAGTACTAG+CGG | 0.611663 | 7.3:-74958212 | MS.gene062410:CDS |
| ATGACCAAGATCATGATCAT+GGG | 0.612435 | 7.3:-74960203 | MS.gene062410:CDS |
| AGCGATCTAAATTAGCCGCA+AGG | 0.612871 | 7.3:-74959459 | MS.gene062410:CDS |
| CGTGGTGGCAATTTCAAGTG+TGG | 0.617011 | 7.3:-74960241 | MS.gene062410:CDS |
| TACATCATTCAGAAACCTTG+CGG | 0.619295 | 7.3:+74959444 | None:intergenic |
| CTAGTACTAGCTGTGATGAG+AGG | 0.620783 | 7.3:+74958215 | None:intergenic |
| GGGAGTTCAACTGTTAAAGG+TGG | 0.622194 | 7.3:-74959202 | MS.gene062410:CDS |
| TGTGACAGGGGTCTTAGTAG+TGG | 0.628042 | 7.3:-74958296 | MS.gene062410:CDS |
| GGTACTATTTATCAATCATG+AGG | 0.633489 | 7.3:-74959485 | MS.gene062410:CDS |
| ATTAAACAAGGTTGTGACAG+GGG | 0.642687 | 7.3:-74958308 | MS.gene062410:CDS |
| ATATTCTTACTTGCAACAAG+GGG | 0.645688 | 7.3:+74958943 | None:intergenic |
| AGCTGTTAAACAATTAAACA+AGG | 0.650076 | 7.3:-74958320 | MS.gene062410:CDS |
| TAACAGTTGAGGAACTGAGA+AGG | 0.650762 | 7.3:-74959717 | MS.gene062410:CDS |
| GTGGTGGCAATTTCAAGTGT+GGG | 0.651168 | 7.3:-74960240 | MS.gene062410:CDS |
| TACTGGCCCAGGCAGATACA+GGG | 0.658380 | 7.3:-74958519 | MS.gene062410:CDS |
| AATGAACTTTCAAGAGTTTG+GGG | 0.659127 | 7.3:-74957596 | MS.gene062410:CDS |
| AATTAAACAAGGTTGTGACA+GGG | 0.665376 | 7.3:-74958309 | MS.gene062410:CDS |
| ATGTGTTGTAGATGGTGTTG+AGG | 0.674889 | 7.3:-74958104 | MS.gene062410:intron |
| TAGTGGTGAGCATAGTAGTG+TGG | 0.676510 | 7.3:-74958279 | MS.gene062410:CDS |
| AGATACAGCCTTCTTCCACA+GGG | 0.677647 | 7.3:-74957508 | MS.gene062410:CDS |
| AAACAAATAGGTACGCAGAG+AGG | 0.683333 | 7.3:-74957711 | MS.gene062410:intron |
| CATCACAGCTAGTACTAGCG+GGG | 0.699530 | 7.3:-74958210 | MS.gene062410:CDS |
| CAAAATCTTCATGGTCCACG+CGG | 0.704397 | 7.3:+74959120 | None:intergenic |
| GATGGTAACAATAAGCAACA+AGG | 0.706956 | 7.3:-74960300 | MS.gene062410:CDS |
| AGCAAGAGAAAGTCTCCGCG+TGG | 0.714276 | 7.3:-74959135 | MS.gene062410:CDS |
| GAAGAAAAGAGAAGTCGTGG+TGG | 0.739654 | 7.3:-74960256 | MS.gene062410:CDS |
| TATCTGAGATGAACACCCTG+TGG | 0.746948 | 7.3:+74957493 | None:intergenic |
| GGTAACAATAAGCAACAAGG+TGG | 0.752941 | 7.3:-74960297 | MS.gene062410:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGTAAATAAGATTAAGA+TGG | - | chr7.3:74960127-74960146 | MS.gene062410:CDS | 15.0% |
| !! | AATGTAAATAAGATTAAGAT+GGG | - | chr7.3:74960128-74960147 | MS.gene062410:CDS | 15.0% |
| !! | CAAAACACTAAAAATAAATT+TGG | + | chr7.3:74959700-74959719 | None:intergenic | 15.0% |
| !!! | ATAGAATGCATTATTTTTTT+GGG | - | chr7.3:74958843-74958862 | MS.gene062410:intron | 15.0% |
| !!! | GTTTTGTTTAAAAAACAAAT+AGG | - | chr7.3:74960042-74960061 | MS.gene062410:CDS | 15.0% |
| !!! | TATAGAATGCATTATTTTTT+TGG | - | chr7.3:74958842-74958861 | MS.gene062410:intron | 15.0% |
| !! | AACATTCTTGAAAACATAAT+AGG | + | chr7.3:74958795-74958814 | None:intergenic | 20.0% |
| !! | TATTAATGCATTGAATTATC+TGG | - | chr7.3:74959729-74959748 | MS.gene062410:CDS | 20.0% |
| !! | TCAAATAAGTCAATGTAAAT+AGG | + | chr7.3:74958924-74958943 | None:intergenic | 20.0% |
| !!! | ACAGAGAAATTTTAAGATTA+AGG | + | chr7.3:74960006-74960025 | None:intergenic | 20.0% |
| !!! | ACTAATTTGTATATCCAAAT+TGG | - | chr7.3:74959080-74959099 | MS.gene062410:CDS | 20.0% |
| !!! | CTAATTTGTATATCCAAATT+GGG | - | chr7.3:74959081-74959100 | MS.gene062410:CDS | 20.0% |
| !!! | TAGAATGCATTATTTTTTTG+GGG | - | chr7.3:74958844-74958863 | MS.gene062410:intron | 20.0% |
| ! | AAGTAACATTCTCTTCTAAA+AGG | + | chr7.3:74957803-74957822 | None:intergenic | 25.0% |
| ! | AGCTGTTAAACAATTAAACA+AGG | - | chr7.3:74959445-74959464 | MS.gene062410:CDS | 25.0% |
| ! | AGTTATCATCATCATAATGA+AGG | - | chr7.3:74959326-74959345 | MS.gene062410:CDS | 25.0% |
| ! | CTATACTTTCTACCATATTT+GGG | + | chr7.3:74959874-74959893 | None:intergenic | 25.0% |
| ! | CTTCTGTAATAATTGCTAAT+CGG | + | chr7.3:74959851-74959870 | None:intergenic | 25.0% |
| ! | TAAAGCAATTACTAATGAGA+TGG | - | chr7.3:74958754-74958773 | MS.gene062410:intron | 25.0% |
| ! | TATATTCTTACTTGCAACAA+GGG | + | chr7.3:74958826-74958845 | None:intergenic | 25.0% |
| ! | TCTATACTTTCTACCATATT+TGG | + | chr7.3:74959875-74959894 | None:intergenic | 25.0% |
| !! | AGTAACATTCTCTTCTAAAA+GGG | + | chr7.3:74957802-74957821 | None:intergenic | 25.0% |
| !! | GAACTTTTTGTTGAAGAAAA+AGG | - | chr7.3:74958184-74958203 | MS.gene062410:CDS | 25.0% |
| !! | TCAAATTGTTTTCATTAGCT+AGG | + | chr7.3:74959026-74959045 | None:intergenic | 25.0% |
| !!! | AGAGTTATTGTTGCTTTTAA+GGG | - | chr7.3:74958898-74958917 | MS.gene062410:intron | 25.0% |
| !!! | CTGAAGTTTTATCACAAATT+TGG | - | chr7.3:74959966-74959985 | MS.gene062410:CDS | 25.0% |
| !!! | TAGAGTTATTGTTGCTTTTA+AGG | - | chr7.3:74958897-74958916 | MS.gene062410:intron | 25.0% |
| !!! | TGTTTGTATTTTTCAGTTGA+AGG | - | chr7.3:74959373-74959392 | MS.gene062410:CDS | 25.0% |
| AACTGAGAAGGATACATATT+TGG | - | chr7.3:74958060-74958079 | MS.gene062410:intron | 30.0% | |
| AAGAGTGGTATATCAAAACA+AGG | + | chr7.3:74959128-74959147 | None:intergenic | 30.0% | |
| AATGAACTTTCAAGAGTTTG+GGG | - | chr7.3:74960169-74960188 | MS.gene062410:CDS | 30.0% | |
| AATGTCCCTATTCATAAAGA+GGG | + | chr7.3:74959168-74959187 | None:intergenic | 30.0% | |
| AATTAAACAAGGTTGTGACA+GGG | - | chr7.3:74959456-74959475 | MS.gene062410:CDS | 30.0% | |
| ACAAACATTATAGTCGAAAC+AGG | + | chr7.3:74959360-74959379 | None:intergenic | 30.0% | |
| ACAATGAACTTTCAAGAGTT+TGG | - | chr7.3:74960167-74960186 | MS.gene062410:CDS | 30.0% | |
| AGAGAAAGAGGTTATTGATA+TGG | - | chr7.3:74958589-74958608 | MS.gene062410:intron | 30.0% | |
| ATATACATTTAGGCCCAATT+TGG | + | chr7.3:74959097-74959116 | None:intergenic | 30.0% | |
| ATATTCTTACTTGCAACAAG+GGG | + | chr7.3:74958825-74958844 | None:intergenic | 30.0% | |
| ATCAAGTGAATTAGAGATTG+TGG | + | chr7.3:74958699-74958718 | None:intergenic | 30.0% | |
| ATCCTGACGAAATCATTTAT+AGG | - | chr7.3:74957925-74957944 | MS.gene062410:CDS | 30.0% | |
| ATTACTACCAAGCTGAAATT+AGG | + | chr7.3:74960098-74960117 | None:intergenic | 30.0% | |
| CAAAAAGTCTTTAGCAGATT+GGG | - | chr7.3:74959277-74959296 | MS.gene062410:CDS | 30.0% | |
| CAATGAACTTTCAAGAGTTT+GGG | - | chr7.3:74960168-74960187 | MS.gene062410:CDS | 30.0% | |
| CACTGAAAGAAAAAATAACG+AGG | - | chr7.3:74959936-74959955 | MS.gene062410:CDS | 30.0% | |
| CATTACAAACACAAAGATGA+TGG | + | chr7.3:74959618-74959637 | None:intergenic | 30.0% | |
| CTATATTCTTACTTGCAACA+AGG | + | chr7.3:74958827-74958846 | None:intergenic | 30.0% | |
| CTTCCTTAATCATGAATCTA+CGG | + | chr7.3:74959205-74959224 | None:intergenic | 30.0% | |
| CTTGAAGCTTAACAATGAAA+AGG | - | chr7.3:74959793-74959812 | MS.gene062410:CDS | 30.0% | |
| GATCAAAGAAAGATTTGACA+TGG | + | chr7.3:74958430-74958449 | None:intergenic | 30.0% | |
| GATGTAAAAAATGAACGAAC+TGG | - | chr7.3:74958731-74958750 | MS.gene062410:intron | 30.0% | |
| GGTACTATTTATCAATCATG+AGG | - | chr7.3:74958280-74958299 | MS.gene062410:CDS | 30.0% | |
| TGATAAATAGTACCCATGTA+AGG | + | chr7.3:74958274-74958293 | None:intergenic | 30.0% | |
| TGTTCTACAAACCTTGATTT+GGG | + | chr7.3:74957759-74957778 | None:intergenic | 30.0% | |
| TTATCAAGAATGTAAAGCAC+TGG | - | chr7.3:74959397-74959416 | MS.gene062410:CDS | 30.0% | |
| TTATTACAGAAGCCCAAATA+TGG | - | chr7.3:74959859-74959878 | MS.gene062410:CDS | 30.0% | |
| TTGTTCTACAAACCTTGATT+TGG | + | chr7.3:74957760-74957779 | None:intergenic | 30.0% | |
| ! | AGGATACATATTTGGAGTTT+AGG | - | chr7.3:74958068-74958087 | MS.gene062410:intron | 30.0% |
| ! | ATAATTGCTAATCGGTTTAG+TGG | + | chr7.3:74959843-74959862 | None:intergenic | 30.0% |
| ! | GGATACATATTTGGAGTTTA+GGG | - | chr7.3:74958069-74958088 | MS.gene062410:intron | 30.0% |
| AAATTAGGATGCCAGTATTG+TGG | + | chr7.3:74960083-74960102 | None:intergenic | 35.0% | |
| AACAATGTGCATGAACCATT+TGG | + | chr7.3:74958147-74958166 | None:intergenic | 35.0% | |
| AACTGATCCAAATGAAAACC+TGG | + | chr7.3:74958244-74958263 | None:intergenic | 35.0% | |
| AATGTGCCCTCTTTATGAAT+AGG | - | chr7.3:74959159-74959178 | MS.gene062410:CDS | 35.0% | |
| ACAAAAATGCTCCAATGAGA+AGG | + | chr7.3:74958364-74958383 | None:intergenic | 35.0% | |
| ACTCCGTAGATTCATGATTA+AGG | - | chr7.3:74959199-74959218 | MS.gene062410:CDS | 35.0% | |
| ATGACCAAGATCATGATCAT+GGG | - | chr7.3:74957562-74957581 | MS.gene062410:CDS | 35.0% | |
| ATGTGCCCTCTTTATGAATA+GGG | - | chr7.3:74959160-74959179 | MS.gene062410:CDS | 35.0% | |
| ATTAAACAAGGTTGTGACAG+GGG | - | chr7.3:74959457-74959476 | MS.gene062410:CDS | 35.0% | |
| CAAAAATGCTCCAATGAGAA+GGG | + | chr7.3:74958363-74958382 | None:intergenic | 35.0% | |
| CAATGTCCCTATTCATAAAG+AGG | + | chr7.3:74959169-74959188 | None:intergenic | 35.0% | |
| CAATTAAACAAGGTTGTGAC+AGG | - | chr7.3:74959455-74959474 | MS.gene062410:CDS | 35.0% | |
| CATTTGAGAGAACTTGTATC+AGG | + | chr7.3:74960305-74960324 | None:intergenic | 35.0% | |
| CCAAAAAGTCTTTAGCAGAT+TGG | - | chr7.3:74959276-74959295 | MS.gene062410:CDS | 35.0% | |
| CTAAAAGGGTCTCATCAATA+GGG | + | chr7.3:74957788-74957807 | None:intergenic | 35.0% | |
| GATGGTAACAATAAGCAACA+AGG | - | chr7.3:74957465-74957484 | MS.gene062410:CDS | 35.0% | |
| GCTTAGAATACACTGATCTT+AGG | + | chr7.3:74957737-74957756 | None:intergenic | 35.0% | |
| GGTGAATAAGAGTTCCTATA+AGG | + | chr7.3:74957861-74957880 | None:intergenic | 35.0% | |
| GGTTTCTGAATGATGTAACA+TGG | - | chr7.3:74958327-74958346 | MS.gene062410:CDS | 35.0% | |
| TACATCATTCAGAAACCTTG+CGG | + | chr7.3:74958324-74958343 | None:intergenic | 35.0% | |
| TAGATGCAGTGATGAATTCA+AGG | - | chr7.3:74958669-74958688 | MS.gene062410:intron | 35.0% | |
| TCTAAAAGGGTCTCATCAAT+AGG | + | chr7.3:74957789-74957808 | None:intergenic | 35.0% | |
| TGCATCTACCAAAATCTTCA+TGG | + | chr7.3:74958657-74958676 | None:intergenic | 35.0% | |
| TGCCTATAAATGATTTCGTC+AGG | + | chr7.3:74957930-74957949 | None:intergenic | 35.0% | |
| TGTATTCTAAGCCCAAATCA+AGG | - | chr7.3:74957745-74957764 | MS.gene062410:intron | 35.0% | |
| TTCACCTAGAACACCTTTAA+TGG | - | chr7.3:74957875-74957894 | MS.gene062410:CDS | 35.0% | |
| TTGAACTCCCGAAACTAAAA+CGG | + | chr7.3:74958553-74958572 | None:intergenic | 35.0% | |
| TTGAATTATCTGGCAGCTAT+TGG | - | chr7.3:74959739-74959758 | MS.gene062410:CDS | 35.0% | |
| ! | AATGTGTCCAGGTTTTCATT+TGG | - | chr7.3:74958234-74958253 | MS.gene062410:CDS | 35.0% |
| ! | ATATTTGGAGTTTAGGGCTT+TGG | - | chr7.3:74958075-74958094 | MS.gene062410:intron | 35.0% |
| ! | CCAATCTGCTAAAGACTTTT+TGG | + | chr7.3:74959279-74959298 | None:intergenic | 35.0% |
| ! | GACACTGTTGCTATCAATTT+TGG | - | chr7.3:74958394-74958413 | MS.gene062410:intron | 35.0% |
| ! | GGAGAAGTGCATATACATTT+AGG | + | chr7.3:74959107-74959126 | None:intergenic | 35.0% |
| ! | GGTAGAAAGTATAGAGTTCT+CGG | - | chr7.3:74959880-74959899 | MS.gene062410:CDS | 35.0% |
| ! | GGTTTTCATTTGGATCAGTT+TGG | - | chr7.3:74958244-74958263 | MS.gene062410:CDS | 35.0% |
| ! | GTAAGGTTTTCATTTGTAGC+AGG | + | chr7.3:74957699-74957718 | None:intergenic | 35.0% |
| ! | TCCTTTTGTATTTTCCCTAC+TGG | - | chr7.3:74959229-74959248 | MS.gene062410:CDS | 35.0% |
| !! | CATTTTAGCAACAACAAGAG+TGG | + | chr7.3:74959143-74959162 | None:intergenic | 35.0% |
| !! | TCTCATTGGAGCATTTTTGT+GGG | - | chr7.3:74958364-74958383 | MS.gene062410:CDS | 35.0% |
| !! | TTCTCATTGGAGCATTTTTG+TGG | - | chr7.3:74958363-74958382 | MS.gene062410:CDS | 35.0% |
| !! | TTGGCTTGTTAGTTACCAAA+TGG | - | chr7.3:74958129-74958148 | MS.gene062410:CDS | 35.0% |
| !!! | AAGGTGCTTTATTTTGTCCA+TGG | - | chr7.3:74958203-74958222 | MS.gene062410:CDS | 35.0% |
| !!! | AGGTGCTTTATTTTGTCCAT+GGG | - | chr7.3:74958204-74958223 | MS.gene062410:CDS | 35.0% |
| !!! | AGTATTGGCCGTTTTAGTTT+CGG | - | chr7.3:74958542-74958561 | MS.gene062410:CDS | 35.0% |
| !!! | CTTGTGATGGTGACATTTTT+TGG | - | chr7.3:74958110-74958129 | MS.gene062410:CDS | 35.0% |
| AAACAAATAGGTACGCAGAG+AGG | - | chr7.3:74960054-74960073 | MS.gene062410:CDS | 40.0% | |
| AAAGTCTTTAGCAGATTGGG+TGG | - | chr7.3:74959280-74959299 | MS.gene062410:CDS | 40.0% | |
| AGGTGGTGAAGTAAACATGA+TGG | - | chr7.3:74957485-74957504 | MS.gene062410:CDS | 40.0% | |
| AGTAGTGTGGCTTCTTCTAA+TGG | - | chr7.3:74959499-74959518 | MS.gene062410:CDS | 40.0% | |
| ATCGGCAGATCTCAAAGTAT+TGG | - | chr7.3:74958527-74958546 | MS.gene062410:CDS | 40.0% | |
| ATGACACCAGCAGAGAAAAT+TGG | - | chr7.3:74959911-74959930 | MS.gene062410:CDS | 40.0% | |
| ATGGAAGAGGATGGGAAAAT+CGG | - | chr7.3:74958509-74958528 | MS.gene062410:CDS | 40.0% | |
| ATTTGTAGCAGGAACTTGTG+GGG | + | chr7.3:74957688-74957707 | None:intergenic | 40.0% | |
| CATGACCAAGATCATGATCA+TGG | - | chr7.3:74957561-74957580 | MS.gene062410:CDS | 40.0% | |
| CATGATCATGATCTTGGTCA+TGG | + | chr7.3:74957563-74957582 | None:intergenic | 40.0% | |
| CATTTGTAGCAGGAACTTGT+GGG | + | chr7.3:74957689-74957708 | None:intergenic | 40.0% | |
| GAGTCTGCAGAACATATTGA+TGG | + | chr7.3:74958472-74958491 | None:intergenic | 40.0% | |
| GCCAGTAGGGAAAATACAAA+AGG | + | chr7.3:74959233-74959252 | None:intergenic | 40.0% | |
| GGTAACAATAAGCAACAAGG+TGG | - | chr7.3:74957468-74957487 | MS.gene062410:CDS | 40.0% | |
| GTAATGCATCCATTCGATGT+TGG | - | chr7.3:74959632-74959651 | MS.gene062410:CDS | 40.0% | |
| TAACAGTTGAGGAACTGAGA+AGG | - | chr7.3:74958048-74958067 | MS.gene062410:intron | 40.0% | |
| TCAACCCATGATCATGATCT+TGG | + | chr7.3:74957569-74957588 | None:intergenic | 40.0% | |
| TCATTTGTAGCAGGAACTTG+TGG | + | chr7.3:74957690-74957709 | None:intergenic | 40.0% | |
| TTCATGTTTGTGTGTGTCGT+GGG | - | chr7.3:74958008-74958027 | MS.gene062410:CDS | 40.0% | |
| TTCGGGAGTTCAACTGTTAA+AGG | - | chr7.3:74958560-74958579 | MS.gene062410:CDS | 40.0% | |
| ! | ACTCTTGTTTCCCTTCTCAT+TGG | - | chr7.3:74958350-74958369 | MS.gene062410:CDS | 40.0% |
| ! | ATGTGTTGTAGATGGTGTTG+AGG | - | chr7.3:74959661-74959680 | MS.gene062410:CDS | 40.0% |
| ! | CAGCTGTTACTTCACCTTAT+AGG | - | chr7.3:74957844-74957863 | MS.gene062410:CDS | 40.0% |
| ! | TCTTAGGAGAGTTTTTCTCG+CGG | + | chr7.3:74957721-74957740 | None:intergenic | 40.0% |
| !! | CAGTTTGGTTCTCCTTACAT+GGG | - | chr7.3:74958259-74958278 | MS.gene062410:CDS | 40.0% |
| !! | GATGCCATTAAAGGTGTTCT+AGG | + | chr7.3:74957882-74957901 | None:intergenic | 40.0% |
| !! | TCAGTTTGGTTCTCCTTACA+TGG | - | chr7.3:74958258-74958277 | MS.gene062410:CDS | 40.0% |
| !!! | GTATTGGCCGTTTTAGTTTC+GGG | - | chr7.3:74958543-74958562 | MS.gene062410:CDS | 40.0% |
| AATTAGCCCTGTATCTGCCT+GGG | + | chr7.3:74959255-74959274 | None:intergenic | 45.0% | |
| ACACCTTTAATGGCATCTCC+AGG | - | chr7.3:74957885-74957904 | MS.gene062410:CDS | 45.0% | |
| AGACTGACTGCTAGAGCAAA+TGG | - | chr7.3:74958971-74958990 | MS.gene062410:CDS | 45.0% | |
| AGATACAGCCTTCTTCCACA+GGG | - | chr7.3:74960257-74960276 | MS.gene062410:CDS | 45.0% | |
| AGCGATCTAAATTAGCCGCA+AGG | - | chr7.3:74958306-74958325 | MS.gene062410:CDS | 45.0% | |
| AGTTTGGGGAGAAGCTGAAT+CGG | - | chr7.3:74960183-74960202 | MS.gene062410:CDS | 45.0% | |
| CAAAATCTTCATGGTCCACG+CGG | + | chr7.3:74958648-74958667 | None:intergenic | 45.0% | |
| CAGAGAGGAATCCACAATAC+TGG | - | chr7.3:74960069-74960088 | MS.gene062410:CDS | 45.0% | |
| CTAGTACTAGCTGTGATGAG+AGG | + | chr7.3:74959553-74959572 | None:intergenic | 45.0% | |
| CTCATCACAGCTAGTACTAG+CGG | - | chr7.3:74959553-74959572 | MS.gene062410:CDS | 45.0% | |
| CTCCACTAATGGAAGAGGAT+GGG | - | chr7.3:74958501-74958520 | MS.gene062410:CDS | 45.0% | |
| CTGGCATCCTAATTTCAGCT+TGG | - | chr7.3:74960088-74960107 | MS.gene062410:CDS | 45.0% | |
| CTTGGGGTGAAACTTATCTC+AGG | + | chr7.3:74957654-74957673 | None:intergenic | 45.0% | |
| GAACCTGGAGATGCCATTAA+AGG | + | chr7.3:74957891-74957910 | None:intergenic | 45.0% | |
| GAAGAAAAGAGAAGTCGTGG+TGG | - | chr7.3:74957509-74957528 | MS.gene062410:CDS | 45.0% | |
| GCATAAGAGACTAGCGACTA+AGG | - | chr7.3:74957971-74957990 | MS.gene062410:CDS | 45.0% | |
| GGAGAAGAAAAGAGAAGTCG+TGG | - | chr7.3:74957506-74957525 | MS.gene062410:CDS | 45.0% | |
| GGGAGTTCAACTGTTAAAGG+TGG | - | chr7.3:74958563-74958582 | MS.gene062410:CDS | 45.0% | |
| GTTCATGTTTGTGTGTGTCG+TGG | - | chr7.3:74958007-74958026 | MS.gene062410:CDS | 45.0% | |
| TAAAGGTGGCACAGAGAAAG+AGG | - | chr7.3:74958577-74958596 | MS.gene062410:CDS | 45.0% | |
| TAATTAGCCCTGTATCTGCC+TGG | + | chr7.3:74959256-74959275 | None:intergenic | 45.0% | |
| TAGTGGTGAGCATAGTAGTG+TGG | - | chr7.3:74959486-74959505 | MS.gene062410:CDS | 45.0% | |
| TATGTTCTGCAGACTCTCTC+CGG | - | chr7.3:74958476-74958495 | MS.gene062410:intron | 45.0% | |
| TCATCACAGCTAGTACTAGC+GGG | - | chr7.3:74959554-74959573 | MS.gene062410:CDS | 45.0% | |
| TCGGAGAAGTGAACTAGTGA+TGG | - | chr7.3:74960202-74960221 | MS.gene062410:CDS | 45.0% | |
| TTAGTGGCGAGGACATAGTT+TGG | + | chr7.3:74959827-74959846 | None:intergenic | 45.0% | |
| TTCCCATCCTCTTCCATTAG+TGG | + | chr7.3:74958506-74958525 | None:intergenic | 45.0% | |
| TTGCGGCTAATTTAGATCGC+TGG | + | chr7.3:74958307-74958326 | None:intergenic | 45.0% | |
| TTTGTAGCAGGAACTTGTGG+GGG | + | chr7.3:74957687-74957706 | None:intergenic | 45.0% | |
| ! | AGTCGCTAGTCTCTTATGCT+GGG | + | chr7.3:74957970-74957989 | None:intergenic | 45.0% |
| ! | AGTGCTCCAATTTTCTCTGC+TGG | + | chr7.3:74959920-74959939 | None:intergenic | 45.0% |
| ! | GAACTTGTGGGGGTGTATTT+GGG | + | chr7.3:74957677-74957696 | None:intergenic | 45.0% |
| ! | GTGGTGGCAATTTCAAGTGT+GGG | - | chr7.3:74957525-74957544 | MS.gene062410:CDS | 45.0% |
| ! | TAGTCGCTAGTCTCTTATGC+TGG | + | chr7.3:74957971-74957990 | None:intergenic | 45.0% |
| ! | TATCTGAGATGAACACCCTG+TGG | + | chr7.3:74960275-74960294 | None:intergenic | 45.0% |
| ! | TTTGGAGTTTAGGGCTTTGG+AGG | - | chr7.3:74958078-74958097 | MS.gene062410:intron | 45.0% |
| !! | AGCTGTTTTCGTGTCGCATA+AGG | + | chr7.3:74959429-74959448 | None:intergenic | 45.0% |
| !! | GTTGGCTAGCTTAACAGTTG+AGG | - | chr7.3:74958037-74958056 | MS.gene062410:intron | 45.0% |
| ATGTTCTGCAGACTCTCTCC+GGG | - | chr7.3:74958477-74958496 | MS.gene062410:intron | 50.0% | |
| CAGATACAGCCTTCTTCCAC+AGG | - | chr7.3:74960256-74960275 | MS.gene062410:CDS | 50.0% | |
| CATCACAGCTAGTACTAGCG+GGG | - | chr7.3:74959555-74959574 | MS.gene062410:CDS | 50.0% | |
| CATCGATCGCCAACATCGAA+TGG | + | chr7.3:74959644-74959663 | None:intergenic | 50.0% | |
| CCATCCTCTTCCATTAGTGG+AGG | + | chr7.3:74958503-74958522 | None:intergenic | 50.0% | |
| CCTCCACTAATGGAAGAGGA+TGG | - | chr7.3:74958500-74958519 | MS.gene062410:CDS | 50.0% | |
| GATGAACACCCTGTGGAAGA+AGG | + | chr7.3:74960268-74960287 | None:intergenic | 50.0% | |
| GCATCTCCAGGTTCTTCTTC+TGG | - | chr7.3:74957897-74957916 | MS.gene062410:CDS | 50.0% | |
| GGACACATTGCTTCAACCCA+TGG | + | chr7.3:74958223-74958242 | None:intergenic | 50.0% | |
| GGCGATCGATGTGTTGTAGA+TGG | - | chr7.3:74959653-74959672 | MS.gene062410:CDS | 50.0% | |
| GTACTAGCGGGGTTCATGTT+TGG | - | chr7.3:74959566-74959585 | MS.gene062410:CDS | 50.0% | |
| GTGTGTCGTGGGTATCTTGT+TGG | - | chr7.3:74958019-74958038 | MS.gene062410:intron | 50.0% | |
| TCCAGGTTCTTCTTCTGGTG+AGG | - | chr7.3:74957902-74957921 | MS.gene062410:CDS | 50.0% | |
| TCCTCACCAGAAGAAGAACC+TGG | + | chr7.3:74957906-74957925 | None:intergenic | 50.0% | |
| TGTGACAGGGGTCTTAGTAG+TGG | - | chr7.3:74959469-74959488 | MS.gene062410:CDS | 50.0% | |
| ! | CGCGTGGACCATGAAGATTT+TGG | - | chr7.3:74958646-74958665 | MS.gene062410:intron | 50.0% |
| ! | CGTGGTGGCAATTTCAAGTG+TGG | - | chr7.3:74957524-74957543 | MS.gene062410:CDS | 50.0% |
| ! | GGAACTTGTGGGGGTGTATT+TGG | + | chr7.3:74957678-74957697 | None:intergenic | 50.0% |
| ! | GGAGAGTTTTTCTCGCGGTA+AGG | + | chr7.3:74957716-74957735 | None:intergenic | 50.0% |
| ! | TGCTAATCGGTTTAGTGGCG+AGG | + | chr7.3:74959838-74959857 | None:intergenic | 50.0% |
| ! | TGGGTTGAAGCAATGTGTCC+AGG | - | chr7.3:74958223-74958242 | MS.gene062410:CDS | 50.0% |
| ! | TGTATTTTCCCTACTGGCCC+AGG | - | chr7.3:74959235-74959254 | MS.gene062410:CDS | 50.0% |
| !! | AGTTTAGGGCTTTGGAGGTG+GGG | - | chr7.3:74958083-74958102 | MS.gene062410:intron | 50.0% |
| !! | GAGTTTAGGGCTTTGGAGGT+GGG | - | chr7.3:74958082-74958101 | MS.gene062410:intron | 50.0% |
| AGCAAGAGAAAGTCTCCGCG+TGG | - | chr7.3:74958630-74958649 | MS.gene062410:intron | 55.0% | |
| CTCTTCCATTAGTGGAGGCC+CGG | + | chr7.3:74958498-74958517 | None:intergenic | 55.0% | |
| GAGGTGGGGTATGCTTGTGA+TGG | - | chr7.3:74958097-74958116 | MS.gene062410:intron | 55.0% | |
| TACTGGCCCAGGCAGATACA+GGG | - | chr7.3:74959246-74959265 | MS.gene062410:CDS | 55.0% | |
| TGTATCTGCCTGGGCCAGTA+GGG | + | chr7.3:74959246-74959265 | None:intergenic | 55.0% | |
| ! | GTGGGGGTGTATTTGGGCTT+GGG | + | chr7.3:74957671-74957690 | None:intergenic | 55.0% |
| ! | TGGGGGTGTATTTGGGCTTG+GGG | + | chr7.3:74957670-74957689 | None:intergenic | 55.0% |
| ! | TGTGGGGGTGTATTTGGGCT+TGG | + | chr7.3:74957672-74957691 | None:intergenic | 55.0% |
| !! | GGAGTTTAGGGCTTTGGAGG+TGG | - | chr7.3:74958081-74958100 | MS.gene062410:intron | 55.0% |
| CGGGCCTCCACTAATGGAAG+AGG | - | chr7.3:74958496-74958515 | MS.gene062410:CDS | 60.0% | |
| CTACTGGCCCAGGCAGATAC+AGG | - | chr7.3:74959245-74959264 | MS.gene062410:CDS | 60.0% | |
| CTGTATCTGCCTGGGCCAGT+AGG | + | chr7.3:74959247-74959266 | None:intergenic | 60.0% | |
| TCTCTCCGGGCCTCCACTAA+TGG | - | chr7.3:74958490-74958509 | MS.gene062410:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 74957462 | 74960325 | 74957462 | ID=MS.gene062410 |
| chr7.3 | mRNA | 74957462 | 74960325 | 74957462 | ID=MS.gene062410.t1;Parent=MS.gene062410 |
| chr7.3 | exon | 74958953 | 74960325 | 74958953 | ID=MS.gene062410.t1.exon1;Parent=MS.gene062410.t1 |
| chr7.3 | CDS | 74958953 | 74960325 | 74958953 | ID=cds.MS.gene062410.t1;Parent=MS.gene062410.t1 |
| chr7.3 | exon | 74958486 | 74958606 | 74958486 | ID=MS.gene062410.t1.exon2;Parent=MS.gene062410.t1 |
| chr7.3 | CDS | 74958486 | 74958606 | 74958486 | ID=cds.MS.gene062410.t1;Parent=MS.gene062410.t1 |
| chr7.3 | exon | 74958105 | 74958398 | 74958105 | ID=MS.gene062410.t1.exon3;Parent=MS.gene062410.t1 |
| chr7.3 | CDS | 74958105 | 74958398 | 74958105 | ID=cds.MS.gene062410.t1;Parent=MS.gene062410.t1 |
| chr7.3 | exon | 74957830 | 74958032 | 74957830 | ID=MS.gene062410.t1.exon4;Parent=MS.gene062410.t1 |
| chr7.3 | CDS | 74957830 | 74958032 | 74957830 | ID=cds.MS.gene062410.t1;Parent=MS.gene062410.t1 |
| chr7.3 | exon | 74957462 | 74957723 | 74957462 | ID=MS.gene062410.t1.exon5;Parent=MS.gene062410.t1 |
| chr7.3 | CDS | 74957462 | 74957723 | 74957462 | ID=cds.MS.gene062410.t1;Parent=MS.gene062410.t1 |
| Gene Sequence |
| Protein sequence |
