Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32773.t1 | XP_003603195.2 | 95.7 | 750 | 31 | 1 | 1 | 750 | 1 | 749 | 0.00E+00 | 1381.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32773.t1 | Q9LYG9 | 55.8 | 685 | 293 | 8 | 63 | 739 | 48 | 730 | 3.1e-200 | 699.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32773.t1 | G7J8D9 | 95.7 | 750 | 31 | 1 | 1 | 750 | 1 | 749 | 0.0e+00 | 1381.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene32773 | MS.gene062410 | PPI |
| MS.gene32773 | MS.gene014981 | PPI |
| MS.gene32773 | MS.gene42628 | PPI |
| MS.gene32773 | MS.gene42686 | PPI |
| MS.gene32773 | MS.gene42622 | PPI |
| MS.gene32773 | MS.gene014978 | PPI |
| MS.gene32773 | MS.gene32764 | PPI |
| MS.gene32773 | MS.gene42688 | PPI |
| MS.gene32770 | MS.gene32773 | PPI |
| MS.gene32773 | MS.gene74110 | PPI |
| MS.gene32773 | MS.gene014973 | PPI |
| MS.gene32773 | MS.gene97525 | PPI |
| MS.gene32773 | MS.gene42620 | PPI |
| MS.gene42681 | MS.gene32773 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32773.t1 | MTR_3g104920 | 95.733 | 750 | 31 | 1 | 1 | 750 | 1 | 749 | 0.0 | 1452 |
| MS.gene32773.t1 | MTR_3g104920 | 95.794 | 737 | 31 | 0 | 14 | 750 | 1 | 737 | 0.0 | 1430 |
| MS.gene32773.t1 | MTR_3g104990 | 80.466 | 773 | 126 | 5 | 1 | 750 | 1 | 771 | 0.0 | 1226 |
| MS.gene32773.t1 | MTR_3g104940 | 78.941 | 774 | 137 | 3 | 1 | 750 | 1 | 772 | 0.0 | 1196 |
| MS.gene32773.t1 | MTR_2g041220 | 51.901 | 684 | 293 | 12 | 77 | 739 | 77 | 745 | 0.0 | 673 |
| MS.gene32773.t1 | MTR_8g071250 | 43.452 | 672 | 329 | 13 | 89 | 739 | 47 | 688 | 3.59e-169 | 503 |
| MS.gene32773.t1 | MTR_1g113850 | 39.003 | 682 | 356 | 12 | 120 | 748 | 241 | 915 | 4.28e-149 | 459 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32773.t1 | AT5G12080 | 57.872 | 686 | 277 | 8 | 63 | 739 | 48 | 730 | 0.0 | 798 |
| MS.gene32773.t1 | AT5G12080 | 57.872 | 686 | 277 | 8 | 63 | 739 | 48 | 730 | 0.0 | 798 |
| MS.gene32773.t1 | AT5G12080 | 57.872 | 686 | 277 | 8 | 63 | 739 | 48 | 730 | 0.0 | 798 |
| MS.gene32773.t1 | AT5G19520 | 52.670 | 693 | 310 | 8 | 59 | 739 | 52 | 738 | 0.0 | 726 |
| MS.gene32773.t1 | AT5G19520 | 52.670 | 693 | 310 | 8 | 59 | 739 | 52 | 738 | 0.0 | 726 |
| MS.gene32773.t1 | AT2G17010 | 38.532 | 654 | 362 | 8 | 122 | 740 | 240 | 888 | 7.49e-152 | 466 |
| MS.gene32773.t1 | AT1G78610 | 40.506 | 632 | 340 | 6 | 147 | 747 | 211 | 837 | 3.71e-147 | 452 |
| MS.gene32773.t1 | AT3G14810 | 38.897 | 689 | 348 | 12 | 114 | 744 | 188 | 861 | 1.37e-146 | 451 |
| MS.gene32773.t1 | AT1G53470 | 39.871 | 622 | 321 | 9 | 170 | 746 | 251 | 864 | 2.28e-146 | 451 |
| MS.gene32773.t1 | AT2G17000 | 39.867 | 602 | 324 | 7 | 179 | 748 | 234 | 829 | 1.81e-135 | 421 |
| MS.gene32773.t1 | AT2G17000 | 39.867 | 602 | 324 | 7 | 179 | 748 | 234 | 829 | 2.01e-135 | 421 |
| MS.gene32773.t1 | AT3G14810 | 36.430 | 689 | 330 | 13 | 114 | 744 | 188 | 826 | 1.22e-127 | 400 |
| MS.gene32773.t1 | AT2G17010 | 35.854 | 357 | 193 | 7 | 173 | 498 | 295 | 646 | 1.40e-61 | 219 |
Find 155 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATACTTTCAACCATATT+TGG | 0.059180 | 3.1:-82855445 | None:intergenic |
| GACACTGTTGCTATCGATTT+TGG | 0.151071 | 3.1:+82853938 | MS.gene32773:CDS |
| TTCACCTAGAACACCTTTAA+TGG | 0.166704 | 3.1:+82853419 | MS.gene32773:CDS |
| AGGATACATATTTGGAGTTT+AGG | 0.218904 | 3.1:+82853612 | MS.gene32773:CDS |
| ACAATGAACTTTCAAGAGTT+TGG | 0.224035 | 3.1:+82855746 | MS.gene32773:CDS |
| CAGCTGTTACTTCACCTTAT+AGG | 0.232327 | 3.1:+82853388 | MS.gene32773:CDS |
| CTTCTGTAATAATTGCTAAT+TGG | 0.235852 | 3.1:-82855421 | None:intergenic |
| TAGTAACATTCTCTTCTAAA+AGG | 0.249703 | 3.1:-82853344 | None:intergenic |
| GAACTTTCTGTTGAAGAAAA+AGG | 0.249766 | 3.1:+82853728 | MS.gene32773:CDS |
| ACGACACCAGCAGAGAAAAT+TGG | 0.254266 | 3.1:+82855484 | MS.gene32773:CDS |
| GCATCTCCAGGTTCTTCTTC+TGG | 0.277547 | 3.1:+82853441 | MS.gene32773:CDS |
| GGATACATATTTGGAGTTTA+GGG | 0.285104 | 3.1:+82853613 | MS.gene32773:CDS |
| TTGTTCTACAAACCTTGATT+TGG | 0.285408 | 3.1:-82853301 | None:intergenic |
| CAATGAACTTTCAAGAGTTT+GGG | 0.286227 | 3.1:+82855747 | MS.gene32773:CDS |
| AACTGAGAAGGATACATATT+TGG | 0.299045 | 3.1:+82853604 | MS.gene32773:CDS |
| ATTACTACCAAGCTGAAATT+AGG | 0.311064 | 3.1:-82855674 | None:intergenic |
| TCTAAAAGGGTCTCATCAAT+AGG | 0.325584 | 3.1:-82853330 | None:intergenic |
| CTATACTTTCAACCATATTT+GGG | 0.329682 | 3.1:-82855444 | None:intergenic |
| ATATTTGGAGTTTAGGGCTT+TGG | 0.330737 | 3.1:+82853619 | MS.gene32773:CDS |
| CATTTGAGAGAACTTGTATC+AGG | 0.336074 | 3.1:-82855881 | None:intergenic |
| TCTCTCCGGGCCTCCACTAA+TGG | 0.337430 | 3.1:+82854034 | MS.gene32773:CDS |
| TTCGGGAGTTCAGCTGTTAA+AGG | 0.338592 | 3.1:+82854104 | MS.gene32773:CDS |
| CTACTGGCCCAGGCAGATAC+AGG | 0.339554 | 3.1:+82854818 | MS.gene32773:CDS |
| ACTCCGTAGATTCATGATTA+AGG | 0.340419 | 3.1:+82854772 | MS.gene32773:CDS |
| ACTCTTGTTTCCCTTCTCAT+TGG | 0.349071 | 3.1:+82853894 | MS.gene32773:CDS |
| TTCCCAGCCTCTTCCATTAG+TGG | 0.352581 | 3.1:-82854047 | None:intergenic |
| GTACTAGCGGGGTTCATGTT+TGG | 0.355463 | 3.1:+82855139 | MS.gene32773:CDS |
| TTATTACAGAAGCCCAAATA+TGG | 0.356757 | 3.1:+82855432 | MS.gene32773:CDS |
| GAACCTGGAGATGCCATTAA+AGG | 0.366672 | 3.1:-82853432 | None:intergenic |
| AACATTCTTGAAAACATAAT+AGG | 0.371862 | 3.1:-82854336 | None:intergenic |
| TGTTCTACAAACCTTGATTT+GGG | 0.374332 | 3.1:-82853300 | None:intergenic |
| GCTTAGAATACACTGATCTT+AGG | 0.375626 | 3.1:-82853278 | None:intergenic |
| CTGTATCTGCCTGGGCCAGT+AGG | 0.376769 | 3.1:-82854817 | None:intergenic |
| AGTAGTGTGGCTTCTTCTAA+TGG | 0.385108 | 3.1:+82855072 | MS.gene32773:CDS |
| TGCATCTACCAAAATCTTCA+TGG | 0.385620 | 3.1:-82854198 | None:intergenic |
| TAGTCGCTAGTCTCTTATGC+TGG | 0.386965 | 3.1:-82853512 | None:intergenic |
| CTTTCAAGAGTTTGGGGAGA+AGG | 0.394006 | 3.1:+82855754 | MS.gene32773:CDS |
| TCAGTTTGGTTCTCCTTACA+TGG | 0.394428 | 3.1:+82853802 | MS.gene32773:CDS |
| GGTGAATAAGAGTTCCTATA+AGG | 0.395222 | 3.1:-82853402 | None:intergenic |
| TCAACCCATGATCATGATCT+TGG | 0.398144 | 3.1:-82853110 | None:intergenic |
| AGAGAAAGAGGTTATTGATA+TGG | 0.399291 | 3.1:+82854133 | MS.gene32773:CDS |
| ATAATTGCTAATTGGTTTAG+TGG | 0.405746 | 3.1:-82855413 | None:intergenic |
| TAATTAGCCCTGTATCTGCC+TGG | 0.406972 | 3.1:-82854826 | None:intergenic |
| GATGCCATTAAAGGTGTTCT+AGG | 0.410220 | 3.1:-82853423 | None:intergenic |
| CATTTGTAGCAGGAACTTGT+GGG | 0.411786 | 3.1:-82853230 | None:intergenic |
| GGAGTTTAGGGCTTTGGAGG+TGG | 0.414476 | 3.1:+82853625 | MS.gene32773:CDS |
| ATCCTGACGAAATCATTTAT+AGG | 0.416707 | 3.1:+82853469 | MS.gene32773:CDS |
| TGTATCTGCCTGGGCCAGTA+GGG | 0.421172 | 3.1:-82854816 | None:intergenic |
| TTAGTGGCGAGGGCAGAGTT+TGG | 0.428516 | 3.1:-82855397 | None:intergenic |
| TGCCTATAAATGATTTCGTC+AGG | 0.429312 | 3.1:-82853471 | None:intergenic |
| AACAATGTGCATGAACCATT+TGG | 0.430283 | 3.1:-82853688 | None:intergenic |
| TTTGGAGTTTAGGGCTTTGG+AGG | 0.436552 | 3.1:+82853622 | MS.gene32773:CDS |
| TATGTTCTGCAGACTCTCTC+CGG | 0.438869 | 3.1:+82854020 | MS.gene32773:CDS |
| GAGTCTGCAGAACATATTGA+TGG | 0.441671 | 3.1:-82854013 | None:intergenic |
| ATGGAAGAGGCTGGGAAAAT+CGG | 0.443550 | 3.1:+82854053 | MS.gene32773:CDS |
| GGTTGAAAGTATAGAGTTCT+CGG | 0.444414 | 3.1:+82855453 | MS.gene32773:CDS |
| TCATTTGTAGCAGGAACTTG+TGG | 0.446523 | 3.1:-82853231 | None:intergenic |
| TTGGCTTGTTAGTTACCAAA+TGG | 0.451486 | 3.1:+82853673 | MS.gene32773:CDS |
| CTTGAAGCTTAATAATGAAA+AGG | 0.456438 | 3.1:+82855366 | MS.gene32773:CDS |
| GGCGTGGACCATGAAGATTT+TGG | 0.456683 | 3.1:+82854190 | MS.gene32773:CDS |
| ATCAAGTGAATTAGAGATTG+TGG | 0.457488 | 3.1:-82854240 | None:intergenic |
| CTAAAAGGGTCTCATCAATA+GGG | 0.461269 | 3.1:-82853329 | None:intergenic |
| GGCGATCGATGTGTTGTAGA+TGG | 0.464642 | 3.1:+82855226 | MS.gene32773:CDS |
| GTGTGTCGTGGGTATCTTGT+TGG | 0.466820 | 3.1:+82853563 | MS.gene32773:CDS |
| TGGGTTGAAGCAGTGTGTCC+AGG | 0.471337 | 3.1:+82853767 | MS.gene32773:CDS |
| CGGAGAGGAATCCACAATAC+TGG | 0.472256 | 3.1:+82855648 | MS.gene32773:CDS |
| CAGATACAGCCTTCTTCCAC+AGG | 0.477668 | 3.1:+82855835 | MS.gene32773:CDS |
| AGTAACATTCTCTTCTAAAA+GGG | 0.482726 | 3.1:-82853343 | None:intergenic |
| CTGAACTCCCGAAACTAAAA+CGG | 0.482734 | 3.1:-82854094 | None:intergenic |
| CTCTTCCATTAGTGGAGGCC+CGG | 0.490275 | 3.1:-82854039 | None:intergenic |
| CATGACCAAGATCATGATCA+TGG | 0.492732 | 3.1:+82853105 | MS.gene32773:CDS |
| ACTGTGCTTCTCCTGAGATA+AGG | 0.493811 | 3.1:+82853184 | MS.gene32773:CDS |
| CAATTAAACAAGCTTGTGAC+AGG | 0.494751 | 3.1:+82855028 | MS.gene32773:CDS |
| CTTCCTTAATCATGAATCTA+CGG | 0.496022 | 3.1:-82854775 | None:intergenic |
| AAATGTAAATAAGATTAAGA+TGG | 0.497083 | 3.1:+82855706 | MS.gene32773:CDS |
| GCATAAGAGACTAGCGACTA+AGG | 0.497296 | 3.1:+82853515 | MS.gene32773:CDS |
| TGTATTTCCCCTACTGGCCC+AGG | 0.497804 | 3.1:+82854808 | MS.gene32773:CDS |
| AGTCGCTAGTCTCTTATGCT+GGG | 0.498583 | 3.1:-82853511 | None:intergenic |
| TTGCGGCTAATTTAGATCGC+TGG | 0.498595 | 3.1:-82853848 | None:intergenic |
| TCCAGGTTCTTCTTCTGGTG+AGG | 0.503770 | 3.1:+82853446 | MS.gene32773:CDS |
| CATCGATCGCCAACATCGAA+TGG | 0.504479 | 3.1:-82855214 | None:intergenic |
| AATGTAAATAAGATTAAGAT+GGG | 0.505449 | 3.1:+82855707 | MS.gene32773:CDS |
| CCTCCACTAATGGAAGAGGC+TGG | 0.505601 | 3.1:+82854044 | MS.gene32773:CDS |
| TTCATGTTTGTGTGTGTCGT+GGG | 0.518234 | 3.1:+82853552 | MS.gene32773:CDS |
| CTTGGGGTGAACCTTATCTC+AGG | 0.520160 | 3.1:-82853195 | None:intergenic |
| CATTACAAACACAAAGATGA+TGG | 0.521560 | 3.1:-82855188 | None:intergenic |
| CTATATTCTTACTTGCAACA+AGG | 0.521854 | 3.1:-82854368 | None:intergenic |
| TGTATTCTAAGCCCAAATCA+AGG | 0.522553 | 3.1:+82853289 | MS.gene32773:CDS |
| ATCGGCAGATCTCAAAGTAT+TGG | 0.525382 | 3.1:+82854071 | MS.gene32773:CDS |
| TCATCACAGCTAGTACTAGC+GGG | 0.526862 | 3.1:+82855127 | MS.gene32773:CDS |
| TCGGAAAAGTGAACTAGTGA+TGG | 0.532064 | 3.1:+82855781 | MS.gene32773:CDS |
| AAATTAGGATGCCAGTATTG+TGG | 0.533187 | 3.1:-82855659 | None:intergenic |
| GCCAGTAGGGGAAATACAAA+AGG | 0.533230 | 3.1:-82854803 | None:intergenic |
| TGATAAATAGTACCCATGTA+AGG | 0.534123 | 3.1:-82853815 | None:intergenic |
| TCCTCACCAGAAGAAGAACC+TGG | 0.538196 | 3.1:-82853447 | None:intergenic |
| GGACACACTGCTTCAACCCA+TGG | 0.538948 | 3.1:-82853764 | None:intergenic |
| CGGGCCTCCACTAATGGAAG+AGG | 0.542792 | 3.1:+82854040 | MS.gene32773:CDS |
| ACACCTTTAATGGCATCTCC+AGG | 0.542913 | 3.1:+82853429 | MS.gene32773:CDS |
| TGCTAATTGGTTTAGTGGCG+AGG | 0.543238 | 3.1:-82855408 | None:intergenic |
| CCAGCCTCTTCCATTAGTGG+AGG | 0.543767 | 3.1:-82854044 | None:intergenic |
| GAGGTGGTGTATGCTTGTGA+TGG | 0.544535 | 3.1:+82853641 | MS.gene32773:CDS |
| TAAAGAAATTACTAATGAGA+TGG | 0.545783 | 3.1:+82854298 | MS.gene32773:CDS |
| CTCCACTAATGGAAGAGGCT+GGG | 0.547360 | 3.1:+82854045 | MS.gene32773:CDS |
| GATGAACACCCTGTGGAAGA+AGG | 0.550548 | 3.1:-82855844 | None:intergenic |
| AACTGATCCAAATGAAAACC+TGG | 0.550631 | 3.1:-82853785 | None:intergenic |
| GTTCATGTTTGTGTGTGTCG+TGG | 0.551999 | 3.1:+82853551 | MS.gene32773:CDS |
| AATTAGCCCTGTATCTGCCT+GGG | 0.553573 | 3.1:-82854825 | None:intergenic |
| ATGTTCTGCAGACTCTCTCC+GGG | 0.553700 | 3.1:+82854021 | MS.gene32773:CDS |
| CAGTTTGGTTCTCCTTACAT+GGG | 0.553964 | 3.1:+82853803 | MS.gene32773:CDS |
| CTGGCATCCTAATTTCAGCT+TGG | 0.555043 | 3.1:+82855667 | MS.gene32773:CDS |
| ATTTGTAGCAGGAACTTGTG+GGG | 0.558637 | 3.1:-82853229 | None:intergenic |
| TAAAGGTGGCACAGAGAAAG+AGG | 0.562858 | 3.1:+82854121 | MS.gene32773:CDS |
| GTAATGCATCCATTCGATGT+TGG | 0.562974 | 3.1:+82855205 | MS.gene32773:CDS |
| GATGGTAACAATAAGCATCA+AGG | 0.568612 | 3.1:+82853009 | MS.gene32773:CDS |
| TATATTCTTACTTGCAACAA+GGG | 0.569030 | 3.1:-82854367 | None:intergenic |
| TAGATGCAGTGATGAATTCA+AGG | 0.569731 | 3.1:+82854213 | MS.gene32773:CDS |
| GAAGAAAAGAGAAGTGGTGG+TGG | 0.569818 | 3.1:+82853053 | MS.gene32773:CDS |
| CATGATCATGATCTTGGTCA+TGG | 0.572577 | 3.1:-82853104 | None:intergenic |
| AGGTGGTGAAGTAAACATGA+TGG | 0.572945 | 3.1:+82853029 | MS.gene32773:CDS |
| TTTGTAGCAGGAACTTGTGG+GGG | 0.574718 | 3.1:-82853228 | None:intergenic |
| AGTTTGGGGAGAAGGTGAAT+CGG | 0.586028 | 3.1:+82855762 | MS.gene32773:CDS |
| TTATCAAGAACGTAAAGCAC+TGG | 0.590875 | 3.1:+82854970 | MS.gene32773:CDS |
| TGCTTAGGTTGATGAATGGA+TGG | 0.601864 | 3.1:+82852991 | None:intergenic |
| GGGAGTTCAGCTGTTAAAGG+TGG | 0.603850 | 3.1:+82854107 | MS.gene32773:CDS |
| GCTAATTGGTTTAGTGGCGA+GGG | 0.603953 | 3.1:-82855407 | None:intergenic |
| GTATCTGCCTGGGCCAGTAG+GGG | 0.605173 | 3.1:-82854815 | None:intergenic |
| GATCAAAGAAAGATTTGACA+TGG | 0.605754 | 3.1:-82853971 | None:intergenic |
| GGTTTCTGAATGATGTAACA+TGG | 0.606401 | 3.1:+82853871 | MS.gene32773:CDS |
| AAAGTCTTTAGCAGATTGGG+TGG | 0.609117 | 3.1:+82854853 | MS.gene32773:CDS |
| CTCATCACAGCTAGTACTAG+CGG | 0.611663 | 3.1:+82855126 | MS.gene32773:CDS |
| ATGACCAAGATCATGATCAT+GGG | 0.612435 | 3.1:+82853106 | MS.gene32773:CDS |
| AGCGATCTAAATTAGCCGCA+AGG | 0.612871 | 3.1:+82853850 | MS.gene32773:CDS |
| AATTAAACAAGCTTGTGACA+GGG | 0.617603 | 3.1:+82855029 | MS.gene32773:CDS |
| TACATCATTCAGAAACCTTG+CGG | 0.619295 | 3.1:-82853865 | None:intergenic |
| CTAGTACTAGCTGTGATGAG+AGG | 0.620783 | 3.1:-82855123 | None:intergenic |
| GGTGGTGGCAATTTCAAATG+TGG | 0.624592 | 3.1:+82853068 | MS.gene32773:CDS |
| GATGGAGAAGAAAAGAGAAG+TGG | 0.625504 | 3.1:+82853047 | MS.gene32773:CDS |
| TGTGACAGGGGTCTTAGTAG+TGG | 0.625559 | 3.1:+82855042 | MS.gene32773:CDS |
| GGTACTATTTATCAATCATG+AGG | 0.633489 | 3.1:+82853824 | MS.gene32773:CDS |
| GATGAAGCAAGAGAAAGTCT+CGG | 0.637612 | 3.1:+82854169 | MS.gene32773:CDS |
| ATTAAACAAGCTTGTGACAG+GGG | 0.640205 | 3.1:+82855030 | MS.gene32773:CDS |
| ATATTCTTACTTGCAACAAG+GGG | 0.645688 | 3.1:-82854366 | None:intergenic |
| GGAGAAGAAAAGAGAAGTGG+TGG | 0.653179 | 3.1:+82853050 | MS.gene32773:CDS |
| TAACAGCTGAGGAACTGAGA+AGG | 0.655836 | 3.1:+82853592 | MS.gene32773:CDS |
| TACTGGCCCAGGCAGATACA+GGG | 0.658380 | 3.1:+82854819 | MS.gene32773:CDS |
| AATGAACTTTCAAGAGTTTG+GGG | 0.659127 | 3.1:+82855748 | MS.gene32773:CDS |
| GTGGTGGCAATTTCAAATGT+GGG | 0.661574 | 3.1:+82853069 | MS.gene32773:CDS |
| AGCAAGAGAAAGTCTCGGCG+TGG | 0.668540 | 3.1:+82854174 | MS.gene32773:CDS |
| GTTGGCTAGCATAACAGCTG+AGG | 0.671221 | 3.1:+82853581 | MS.gene32773:CDS |
| ATGTGTTGTAGATGGTGTTG+AGG | 0.674889 | 3.1:+82855234 | MS.gene32773:CDS |
| TAGTGGTGAGCATAGTAGTG+TGG | 0.676510 | 3.1:+82855059 | MS.gene32773:CDS |
| AGATACAGCCTTCTTCCACA+GGG | 0.677647 | 3.1:+82855836 | MS.gene32773:CDS |
| CATCACAGCTAGTACTAGCG+GGG | 0.699530 | 3.1:+82855128 | MS.gene32773:CDS |
| TATCTGAGATGAACACCCTG+TGG | 0.746948 | 3.1:-82855851 | None:intergenic |
| GGTAACAATAAGCATCAAGG+TGG | 0.751134 | 3.1:+82853012 | MS.gene32773:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAACAATAAAAATAAATT+TGG | - | chr3.1:82855273-82855292 | None:intergenic | 10.0% |
| !! | AAATGTAAATAAGATTAAGA+TGG | + | chr3.1:82855706-82855725 | MS.gene32773:CDS | 15.0% |
| !! | AATGTAAATAAGATTAAGAT+GGG | + | chr3.1:82855707-82855726 | MS.gene32773:CDS | 15.0% |
| !!! | ATATAGAATGCATTATTTTT+TGG | + | chr3.1:82854385-82854404 | MS.gene32773:intron | 15.0% |
| !!! | ATTAATTTGTATATCCAATT+TGG | + | chr3.1:82854653-82854672 | MS.gene32773:intron | 15.0% |
| !!! | TATAGAATGCATTATTTTTT+GGG | + | chr3.1:82854386-82854405 | MS.gene32773:intron | 15.0% |
| !!! | TTAATTTGTATATCCAATTT+GGG | + | chr3.1:82854654-82854673 | MS.gene32773:intron | 15.0% |
| !! | AAAAAAAAAAAATAGGTACG+CGG | + | chr3.1:82855628-82855647 | MS.gene32773:intron | 20.0% |
| !! | AACATTCTTGAAAACATAAT+AGG | - | chr3.1:82854339-82854358 | None:intergenic | 20.0% |
| !! | TAAAGAAATTACTAATGAGA+TGG | + | chr3.1:82854298-82854317 | MS.gene32773:CDS | 20.0% |
| !! | TCAAATAAGTCAATGTAAAT+AGG | - | chr3.1:82854468-82854487 | None:intergenic | 20.0% |
| !!! | ATAGAATGCATTATTTTTTG+GGG | + | chr3.1:82854387-82854406 | MS.gene32773:intron | 20.0% |
| !!! | GAAAAGTTTTATCACAAATT+TGG | + | chr3.1:82855541-82855560 | MS.gene32773:intron | 20.0% |
| !!! | TGTTTGTATTTTTCAGTTAA+AGG | + | chr3.1:82854946-82854965 | MS.gene32773:intron | 20.0% |
| ! | AGTTATCATCATCATAATGA+AGG | + | chr3.1:82854899-82854918 | MS.gene32773:intron | 25.0% |
| ! | CTATACTTTCAACCATATTT+GGG | - | chr3.1:82855447-82855466 | None:intergenic | 25.0% |
| ! | CTTCTGTAATAATTGCTAAT+TGG | - | chr3.1:82855424-82855443 | None:intergenic | 25.0% |
| ! | CTTGAAGCTTAATAATGAAA+AGG | + | chr3.1:82855366-82855385 | MS.gene32773:CDS | 25.0% |
| ! | TAGCTAATGAAAACAACTTA+TGG | + | chr3.1:82854576-82854595 | MS.gene32773:intron | 25.0% |
| ! | TAGTAACATTCTCTTCTAAA+AGG | - | chr3.1:82853347-82853366 | None:intergenic | 25.0% |
| ! | TATATTCTTACTTGCAACAA+GGG | - | chr3.1:82854370-82854389 | None:intergenic | 25.0% |
| ! | TATTGATGCATTGAATTATC+TGG | + | chr3.1:82855302-82855321 | MS.gene32773:intron | 25.0% |
| ! | TCTATACTTTCAACCATATT+TGG | - | chr3.1:82855448-82855467 | None:intergenic | 25.0% |
| !! | AGTAACATTCTCTTCTAAAA+GGG | - | chr3.1:82853346-82853365 | None:intergenic | 25.0% |
| !! | ATAATTGCTAATTGGTTTAG+TGG | - | chr3.1:82855416-82855435 | None:intergenic | 25.0% |
| !!! | AGAGTTATTGTTGCTTTTAA+GGG | + | chr3.1:82854442-82854461 | MS.gene32773:intron | 25.0% |
| !!! | ATAAGTTGTTTTCATTAGCT+AGG | - | chr3.1:82854577-82854596 | None:intergenic | 25.0% |
| !!! | TAGAATGCATTATTTTTTGG+GGG | + | chr3.1:82854388-82854407 | MS.gene32773:intron | 25.0% |
| !!! | TAGAGTTATTGTTGCTTTTA+AGG | + | chr3.1:82854441-82854460 | MS.gene32773:intron | 25.0% |
| !!! | TTTTAGAAGAGAATGTTACT+AGG | + | chr3.1:82853346-82853365 | MS.gene32773:CDS | 25.0% |
| AACTGAGAAGGATACATATT+TGG | + | chr3.1:82853604-82853623 | MS.gene32773:CDS | 30.0% | |
| AAGAGTGGTATATCAAAACA+AGG | - | chr3.1:82854701-82854720 | None:intergenic | 30.0% | |
| AATGAACTTTCAAGAGTTTG+GGG | + | chr3.1:82855748-82855767 | MS.gene32773:CDS | 30.0% | |
| AATGTCCCTATTCATAAAGA+GGG | - | chr3.1:82854741-82854760 | None:intergenic | 30.0% | |
| AATTAAACAAGCTTGTGACA+GGG | + | chr3.1:82855029-82855048 | MS.gene32773:CDS | 30.0% | |
| ACAAACATTATAGTCGAAAC+AGG | - | chr3.1:82854933-82854952 | None:intergenic | 30.0% | |
| ACAATGAACTTTCAAGAGTT+TGG | + | chr3.1:82855746-82855765 | MS.gene32773:CDS | 30.0% | |
| AGAGAAAGAGGTTATTGATA+TGG | + | chr3.1:82854133-82854152 | MS.gene32773:CDS | 30.0% | |
| ATATACATTTAGGCCCAAAT+TGG | - | chr3.1:82854670-82854689 | None:intergenic | 30.0% | |
| ATATTCTTACTTGCAACAAG+GGG | - | chr3.1:82854369-82854388 | None:intergenic | 30.0% | |
| ATCAAGTGAATTAGAGATTG+TGG | - | chr3.1:82854243-82854262 | None:intergenic | 30.0% | |
| ATCCTGACGAAATCATTTAT+AGG | + | chr3.1:82853469-82853488 | MS.gene32773:CDS | 30.0% | |
| ATTACTACCAAGCTGAAATT+AGG | - | chr3.1:82855677-82855696 | None:intergenic | 30.0% | |
| CAAAAAGTCTTTAGCAGATT+GGG | + | chr3.1:82854850-82854869 | MS.gene32773:CDS | 30.0% | |
| CAATGAACTTTCAAGAGTTT+GGG | + | chr3.1:82855747-82855766 | MS.gene32773:CDS | 30.0% | |
| CACTGAAAGAAAAAATAACG+AGG | + | chr3.1:82855509-82855528 | MS.gene32773:CDS | 30.0% | |
| CATTACAAACACAAAGATGA+TGG | - | chr3.1:82855191-82855210 | None:intergenic | 30.0% | |
| CTATATTCTTACTTGCAACA+AGG | - | chr3.1:82854371-82854390 | None:intergenic | 30.0% | |
| CTTCCTTAATCATGAATCTA+CGG | - | chr3.1:82854778-82854797 | None:intergenic | 30.0% | |
| GAACTTTCTGTTGAAGAAAA+AGG | + | chr3.1:82853728-82853747 | MS.gene32773:CDS | 30.0% | |
| GATCAAAGAAAGATTTGACA+TGG | - | chr3.1:82853974-82853993 | None:intergenic | 30.0% | |
| GATGTAAAAAATGAACGAAC+TGG | + | chr3.1:82854275-82854294 | MS.gene32773:CDS | 30.0% | |
| GGTACTATTTATCAATCATG+AGG | + | chr3.1:82853824-82853843 | MS.gene32773:CDS | 30.0% | |
| GTATATCAAAACAAGGAGAA+GGG | - | chr3.1:82854694-82854713 | None:intergenic | 30.0% | |
| TGATAAATAGTACCCATGTA+AGG | - | chr3.1:82853818-82853837 | None:intergenic | 30.0% | |
| TGTTCTACAAACCTTGATTT+GGG | - | chr3.1:82853303-82853322 | None:intergenic | 30.0% | |
| TTATTACAGAAGCCCAAATA+TGG | + | chr3.1:82855432-82855451 | MS.gene32773:CDS | 30.0% | |
| TTGTTCTACAAACCTTGATT+TGG | - | chr3.1:82853304-82853323 | None:intergenic | 30.0% | |
| ! | AGGATACATATTTGGAGTTT+AGG | + | chr3.1:82853612-82853631 | MS.gene32773:CDS | 30.0% |
| ! | GGATACATATTTGGAGTTTA+GGG | + | chr3.1:82853613-82853632 | MS.gene32773:CDS | 30.0% |
| AAATTAGGATGCCAGTATTG+TGG | - | chr3.1:82855662-82855681 | None:intergenic | 35.0% | |
| AACAATGTGCATGAACCATT+TGG | - | chr3.1:82853691-82853710 | None:intergenic | 35.0% | |
| AACTGATCCAAATGAAAACC+TGG | - | chr3.1:82853788-82853807 | None:intergenic | 35.0% | |
| AATGTGCCCTCTTTATGAAT+AGG | + | chr3.1:82854732-82854751 | MS.gene32773:intron | 35.0% | |
| ACAAAAATGCTCCAATGAGA+AGG | - | chr3.1:82853908-82853927 | None:intergenic | 35.0% | |
| ACTCCGTAGATTCATGATTA+AGG | + | chr3.1:82854772-82854791 | MS.gene32773:CDS | 35.0% | |
| ATGACCAAGATCATGATCAT+GGG | + | chr3.1:82853106-82853125 | MS.gene32773:CDS | 35.0% | |
| ATGTGCCCTCTTTATGAATA+GGG | + | chr3.1:82854733-82854752 | MS.gene32773:intron | 35.0% | |
| ATTAAACAAGCTTGTGACAG+GGG | + | chr3.1:82855030-82855049 | MS.gene32773:CDS | 35.0% | |
| CAAAAATGCTCCAATGAGAA+GGG | - | chr3.1:82853907-82853926 | None:intergenic | 35.0% | |
| CAATGTCCCTATTCATAAAG+AGG | - | chr3.1:82854742-82854761 | None:intergenic | 35.0% | |
| CAATTAAACAAGCTTGTGAC+AGG | + | chr3.1:82855028-82855047 | MS.gene32773:CDS | 35.0% | |
| CATTTGAGAGAACTTGTATC+AGG | - | chr3.1:82855884-82855903 | None:intergenic | 35.0% | |
| CCAAAAAGTCTTTAGCAGAT+TGG | + | chr3.1:82854849-82854868 | MS.gene32773:CDS | 35.0% | |
| CTAAAAGGGTCTCATCAATA+GGG | - | chr3.1:82853332-82853351 | None:intergenic | 35.0% | |
| CTGTATACACATTTGTGAGA+CGG | + | chr3.1:82854505-82854524 | MS.gene32773:intron | 35.0% | |
| GATGGTAACAATAAGCATCA+AGG | + | chr3.1:82853009-82853028 | MS.gene32773:CDS | 35.0% | |
| GCTTAGAATACACTGATCTT+AGG | - | chr3.1:82853281-82853300 | None:intergenic | 35.0% | |
| GGTATATCAAAACAAGGAGA+AGG | - | chr3.1:82854695-82854714 | None:intergenic | 35.0% | |
| GGTGAATAAGAGTTCCTATA+AGG | - | chr3.1:82853405-82853424 | None:intergenic | 35.0% | |
| GGTTTCTGAATGATGTAACA+TGG | + | chr3.1:82853871-82853890 | MS.gene32773:CDS | 35.0% | |
| TACATCATTCAGAAACCTTG+CGG | - | chr3.1:82853868-82853887 | None:intergenic | 35.0% | |
| TAGATGCAGTGATGAATTCA+AGG | + | chr3.1:82854213-82854232 | MS.gene32773:CDS | 35.0% | |
| TCTAAAAGGGTCTCATCAAT+AGG | - | chr3.1:82853333-82853352 | None:intergenic | 35.0% | |
| TGCATCTACCAAAATCTTCA+TGG | - | chr3.1:82854201-82854220 | None:intergenic | 35.0% | |
| TGCCTATAAATGATTTCGTC+AGG | - | chr3.1:82853474-82853493 | None:intergenic | 35.0% | |
| TGTATTCTAAGCCCAAATCA+AGG | + | chr3.1:82853289-82853308 | MS.gene32773:CDS | 35.0% | |
| TTATCAAGAACGTAAAGCAC+TGG | + | chr3.1:82854970-82854989 | MS.gene32773:CDS | 35.0% | |
| TTCACCTAGAACACCTTTAA+TGG | + | chr3.1:82853419-82853438 | MS.gene32773:CDS | 35.0% | |
| TTGAATTATCTGGCAGCTAT+TGG | + | chr3.1:82855312-82855331 | MS.gene32773:intron | 35.0% | |
| ! | ATATTTGGAGTTTAGGGCTT+TGG | + | chr3.1:82853619-82853638 | MS.gene32773:CDS | 35.0% |
| ! | CCAATCTGCTAAAGACTTTT+TGG | - | chr3.1:82854852-82854871 | None:intergenic | 35.0% |
| ! | GGTTGAAAGTATAGAGTTCT+CGG | + | chr3.1:82855453-82855472 | MS.gene32773:CDS | 35.0% |
| ! | GGTTTTCATTTGGATCAGTT+TGG | + | chr3.1:82853788-82853807 | MS.gene32773:CDS | 35.0% |
| ! | GTAAGGTTTTCATTTGTAGC+AGG | - | chr3.1:82853243-82853262 | None:intergenic | 35.0% |
| !! | CATTTTAGCAACAACAAGAG+TGG | - | chr3.1:82854716-82854735 | None:intergenic | 35.0% |
| !! | TCTCATTGGAGCATTTTTGT+GGG | + | chr3.1:82853908-82853927 | MS.gene32773:CDS | 35.0% |
| !! | TTCTCATTGGAGCATTTTTG+TGG | + | chr3.1:82853907-82853926 | MS.gene32773:CDS | 35.0% |
| !! | TTGGCTTGTTAGTTACCAAA+TGG | + | chr3.1:82853673-82853692 | MS.gene32773:CDS | 35.0% |
| !!! | AAGGTGCTTTATTTTGTCCA+TGG | + | chr3.1:82853747-82853766 | MS.gene32773:CDS | 35.0% |
| !!! | AGGTGCTTTATTTTGTCCAT+GGG | + | chr3.1:82853748-82853767 | MS.gene32773:CDS | 35.0% |
| !!! | AGTATTGGCCGTTTTAGTTT+CGG | + | chr3.1:82854086-82854105 | MS.gene32773:CDS | 35.0% |
| !!! | CTTGTGATGGTGACATTTTT+TGG | + | chr3.1:82853654-82853673 | MS.gene32773:CDS | 35.0% |
| AAAAAAATAGGTACGCGGAG+AGG | + | chr3.1:82855633-82855652 | MS.gene32773:intron | 40.0% | |
| AAAGTCTTTAGCAGATTGGG+TGG | + | chr3.1:82854853-82854872 | MS.gene32773:CDS | 40.0% | |
| AGGTGGTGAAGTAAACATGA+TGG | + | chr3.1:82853029-82853048 | MS.gene32773:CDS | 40.0% | |
| AGTAGTGTGGCTTCTTCTAA+TGG | + | chr3.1:82855072-82855091 | MS.gene32773:CDS | 40.0% | |
| ATCGGCAGATCTCAAAGTAT+TGG | + | chr3.1:82854071-82854090 | MS.gene32773:CDS | 40.0% | |
| ATTTGTAGCAGGAACTTGTG+GGG | - | chr3.1:82853232-82853251 | None:intergenic | 40.0% | |
| CATGACCAAGATCATGATCA+TGG | + | chr3.1:82853105-82853124 | MS.gene32773:CDS | 40.0% | |
| CATGATCATGATCTTGGTCA+TGG | - | chr3.1:82853107-82853126 | None:intergenic | 40.0% | |
| CATTTGTAGCAGGAACTTGT+GGG | - | chr3.1:82853233-82853252 | None:intergenic | 40.0% | |
| CTGAACTCCCGAAACTAAAA+CGG | - | chr3.1:82854097-82854116 | None:intergenic | 40.0% | |
| GAGTCTGCAGAACATATTGA+TGG | - | chr3.1:82854016-82854035 | None:intergenic | 40.0% | |
| GATGAAGCAAGAGAAAGTCT+CGG | + | chr3.1:82854169-82854188 | MS.gene32773:CDS | 40.0% | |
| GATGGAGAAGAAAAGAGAAG+TGG | + | chr3.1:82853047-82853066 | MS.gene32773:CDS | 40.0% | |
| GGTAACAATAAGCATCAAGG+TGG | + | chr3.1:82853012-82853031 | MS.gene32773:CDS | 40.0% | |
| GTAATGCATCCATTCGATGT+TGG | + | chr3.1:82855205-82855224 | MS.gene32773:CDS | 40.0% | |
| GTGGTGGCAATTTCAAATGT+GGG | + | chr3.1:82853069-82853088 | MS.gene32773:CDS | 40.0% | |
| TCAACCCATGATCATGATCT+TGG | - | chr3.1:82853113-82853132 | None:intergenic | 40.0% | |
| TCATTTGTAGCAGGAACTTG+TGG | - | chr3.1:82853234-82853253 | None:intergenic | 40.0% | |
| TCGGAAAAGTGAACTAGTGA+TGG | + | chr3.1:82855781-82855800 | MS.gene32773:CDS | 40.0% | |
| TTCATGTTTGTGTGTGTCGT+GGG | + | chr3.1:82853552-82853571 | MS.gene32773:CDS | 40.0% | |
| ! | ACTCTTGTTTCCCTTCTCAT+TGG | + | chr3.1:82853894-82853913 | MS.gene32773:CDS | 40.0% |
| ! | AGTGTGTCCAGGTTTTCATT+TGG | + | chr3.1:82853778-82853797 | MS.gene32773:CDS | 40.0% |
| ! | ATGTGTTGTAGATGGTGTTG+AGG | + | chr3.1:82855234-82855253 | MS.gene32773:CDS | 40.0% |
| ! | CAGCTGTTACTTCACCTTAT+AGG | + | chr3.1:82853388-82853407 | MS.gene32773:CDS | 40.0% |
| ! | GGAGAAGGGCATATACATTT+AGG | - | chr3.1:82854680-82854699 | None:intergenic | 40.0% |
| ! | TCCTTTTGTATTTCCCCTAC+TGG | + | chr3.1:82854802-82854821 | MS.gene32773:CDS | 40.0% |
| ! | TCTTAGGAGAGTTTTTCTCG+TGG | - | chr3.1:82853265-82853284 | None:intergenic | 40.0% |
| !! | CAGTTTGGTTCTCCTTACAT+GGG | + | chr3.1:82853803-82853822 | MS.gene32773:CDS | 40.0% |
| !! | GATGCCATTAAAGGTGTTCT+AGG | - | chr3.1:82853426-82853445 | None:intergenic | 40.0% |
| !! | TCAGTTTGGTTCTCCTTACA+TGG | + | chr3.1:82853802-82853821 | MS.gene32773:CDS | 40.0% |
| !!! | GACACTGTTGCTATCGATTT+TGG | + | chr3.1:82853938-82853957 | MS.gene32773:CDS | 40.0% |
| !!! | GTATTGGCCGTTTTAGTTTC+GGG | + | chr3.1:82854087-82854106 | MS.gene32773:CDS | 40.0% |
| AATTAGCCCTGTATCTGCCT+GGG | - | chr3.1:82854828-82854847 | None:intergenic | 45.0% | |
| ACACCTTTAATGGCATCTCC+AGG | + | chr3.1:82853429-82853448 | MS.gene32773:CDS | 45.0% | |
| ACGACACCAGCAGAGAAAAT+TGG | + | chr3.1:82855484-82855503 | MS.gene32773:CDS | 45.0% | |
| ACTGTGCTTCTCCTGAGATA+AGG | + | chr3.1:82853184-82853203 | MS.gene32773:CDS | 45.0% | |
| AGATACAGCCTTCTTCCACA+GGG | + | chr3.1:82855836-82855855 | MS.gene32773:CDS | 45.0% | |
| AGCGATCTAAATTAGCCGCA+AGG | + | chr3.1:82853850-82853869 | MS.gene32773:CDS | 45.0% | |
| AGTTTGGGGAGAAGGTGAAT+CGG | + | chr3.1:82855762-82855781 | MS.gene32773:CDS | 45.0% | |
| ATGGAAGAGGCTGGGAAAAT+CGG | + | chr3.1:82854053-82854072 | MS.gene32773:CDS | 45.0% | |
| CTAGTACTAGCTGTGATGAG+AGG | - | chr3.1:82855126-82855145 | None:intergenic | 45.0% | |
| CTCATCACAGCTAGTACTAG+CGG | + | chr3.1:82855126-82855145 | MS.gene32773:CDS | 45.0% | |
| CTGGCATCCTAATTTCAGCT+TGG | + | chr3.1:82855667-82855686 | MS.gene32773:CDS | 45.0% | |
| CTTTAGCAGATTGGGTGGTA+AGG | + | chr3.1:82854858-82854877 | MS.gene32773:intron | 45.0% | |
| CTTTCAAGAGTTTGGGGAGA+AGG | + | chr3.1:82855754-82855773 | MS.gene32773:CDS | 45.0% | |
| GAACCTGGAGATGCCATTAA+AGG | - | chr3.1:82853435-82853454 | None:intergenic | 45.0% | |
| GAAGAAAAGAGAAGTGGTGG+TGG | + | chr3.1:82853053-82853072 | MS.gene32773:CDS | 45.0% | |
| GCATAAGAGACTAGCGACTA+AGG | + | chr3.1:82853515-82853534 | MS.gene32773:CDS | 45.0% | |
| GCCAGTAGGGGAAATACAAA+AGG | - | chr3.1:82854806-82854825 | None:intergenic | 45.0% | |
| GGAGAAGAAAAGAGAAGTGG+TGG | + | chr3.1:82853050-82853069 | MS.gene32773:CDS | 45.0% | |
| GTTCATGTTTGTGTGTGTCG+TGG | + | chr3.1:82853551-82853570 | MS.gene32773:CDS | 45.0% | |
| TAAAGGTGGCACAGAGAAAG+AGG | + | chr3.1:82854121-82854140 | MS.gene32773:CDS | 45.0% | |
| TAACAGCTGAGGAACTGAGA+AGG | + | chr3.1:82853592-82853611 | MS.gene32773:CDS | 45.0% | |
| TAATTAGCCCTGTATCTGCC+TGG | - | chr3.1:82854829-82854848 | None:intergenic | 45.0% | |
| TAGTGGTGAGCATAGTAGTG+TGG | + | chr3.1:82855059-82855078 | MS.gene32773:CDS | 45.0% | |
| TATGTTCTGCAGACTCTCTC+CGG | + | chr3.1:82854020-82854039 | MS.gene32773:CDS | 45.0% | |
| TCATCACAGCTAGTACTAGC+GGG | + | chr3.1:82855127-82855146 | MS.gene32773:CDS | 45.0% | |
| TTCGGGAGTTCAGCTGTTAA+AGG | + | chr3.1:82854104-82854123 | MS.gene32773:CDS | 45.0% | |
| TTGCGGCTAATTTAGATCGC+TGG | - | chr3.1:82853851-82853870 | None:intergenic | 45.0% | |
| TTTGTAGCAGGAACTTGTGG+GGG | - | chr3.1:82853231-82853250 | None:intergenic | 45.0% | |
| ! | AGTCGCTAGTCTCTTATGCT+GGG | - | chr3.1:82853514-82853533 | None:intergenic | 45.0% |
| ! | AGTGCTCCAATTTTCTCTGC+TGG | - | chr3.1:82855493-82855512 | None:intergenic | 45.0% |
| ! | GAACTTGTGGGGGTGTATTT+GGG | - | chr3.1:82853221-82853240 | None:intergenic | 45.0% |
| ! | GCTAATTGGTTTAGTGGCGA+GGG | - | chr3.1:82855410-82855429 | None:intergenic | 45.0% |
| ! | GGAGAGTTTTTCTCGTGGTA+AGG | - | chr3.1:82853260-82853279 | None:intergenic | 45.0% |
| ! | GGTGGTGGCAATTTCAAATG+TGG | + | chr3.1:82853068-82853087 | MS.gene32773:CDS | 45.0% |
| ! | TAGTCGCTAGTCTCTTATGC+TGG | - | chr3.1:82853515-82853534 | None:intergenic | 45.0% |
| ! | TATCTGAGATGAACACCCTG+TGG | - | chr3.1:82855854-82855873 | None:intergenic | 45.0% |
| ! | TGCTAATTGGTTTAGTGGCG+AGG | - | chr3.1:82855411-82855430 | None:intergenic | 45.0% |
| ! | TTTGGAGTTTAGGGCTTTGG+AGG | + | chr3.1:82853622-82853641 | MS.gene32773:CDS | 45.0% |
| !! | AGCTGTTTTCGTGTCGCATA+AGG | - | chr3.1:82855002-82855021 | None:intergenic | 45.0% |
| !!! | TGTTTTAAAAAAAAAAAAAT+AGG | + | chr3.1:82855621-82855640 | MS.gene32773:intron | 5.0% |
| ATGTTCTGCAGACTCTCTCC+GGG | + | chr3.1:82854021-82854040 | MS.gene32773:CDS | 50.0% | |
| CAGATACAGCCTTCTTCCAC+AGG | + | chr3.1:82855835-82855854 | MS.gene32773:CDS | 50.0% | |
| CATCACAGCTAGTACTAGCG+GGG | + | chr3.1:82855128-82855147 | MS.gene32773:CDS | 50.0% | |
| CATCGATCGCCAACATCGAA+TGG | - | chr3.1:82855217-82855236 | None:intergenic | 50.0% | |
| CGGAGAGGAATCCACAATAC+TGG | + | chr3.1:82855648-82855667 | MS.gene32773:CDS | 50.0% | |
| CTCCACTAATGGAAGAGGCT+GGG | + | chr3.1:82854045-82854064 | MS.gene32773:CDS | 50.0% | |
| CTTGGGGTGAACCTTATCTC+AGG | - | chr3.1:82853198-82853217 | None:intergenic | 50.0% | |
| GAGGTGGTGTATGCTTGTGA+TGG | + | chr3.1:82853641-82853660 | MS.gene32773:CDS | 50.0% | |
| GATGAACACCCTGTGGAAGA+AGG | - | chr3.1:82855847-82855866 | None:intergenic | 50.0% | |
| GCATCTCCAGGTTCTTCTTC+TGG | + | chr3.1:82853441-82853460 | MS.gene32773:CDS | 50.0% | |
| GGCGATCGATGTGTTGTAGA+TGG | + | chr3.1:82855226-82855245 | MS.gene32773:CDS | 50.0% | |
| GGGAGTTCAGCTGTTAAAGG+TGG | + | chr3.1:82854107-82854126 | MS.gene32773:CDS | 50.0% | |
| GTACTAGCGGGGTTCATGTT+TGG | + | chr3.1:82855139-82855158 | MS.gene32773:CDS | 50.0% | |
| GTGTGTCGTGGGTATCTTGT+TGG | + | chr3.1:82853563-82853582 | MS.gene32773:CDS | 50.0% | |
| GTTGGCTAGCATAACAGCTG+AGG | + | chr3.1:82853581-82853600 | MS.gene32773:CDS | 50.0% | |
| TCCAGGTTCTTCTTCTGGTG+AGG | + | chr3.1:82853446-82853465 | MS.gene32773:CDS | 50.0% | |
| TCCTCACCAGAAGAAGAACC+TGG | - | chr3.1:82853450-82853469 | None:intergenic | 50.0% | |
| TGTGACAGGGGTCTTAGTAG+TGG | + | chr3.1:82855042-82855061 | MS.gene32773:CDS | 50.0% | |
| TTCCCAGCCTCTTCCATTAG+TGG | - | chr3.1:82854050-82854069 | None:intergenic | 50.0% | |
| ! | GGAACTTGTGGGGGTGTATT+TGG | - | chr3.1:82853222-82853241 | None:intergenic | 50.0% |
| ! | GGCGTGGACCATGAAGATTT+TGG | + | chr3.1:82854190-82854209 | MS.gene32773:CDS | 50.0% |
| !! | AGACGGACTGCTAGAGCAAA+TGG | + | chr3.1:82854522-82854541 | MS.gene32773:intron | 50.0% |
| AGCAAGAGAAAGTCTCGGCG+TGG | + | chr3.1:82854174-82854193 | MS.gene32773:CDS | 55.0% | |
| CCAGCCTCTTCCATTAGTGG+AGG | - | chr3.1:82854047-82854066 | None:intergenic | 55.0% | |
| CCTCCACTAATGGAAGAGGC+TGG | + | chr3.1:82854044-82854063 | MS.gene32773:CDS | 55.0% | |
| CTCTTCCATTAGTGGAGGCC+CGG | - | chr3.1:82854042-82854061 | None:intergenic | 55.0% | |
| GGACACACTGCTTCAACCCA+TGG | - | chr3.1:82853767-82853786 | None:intergenic | 55.0% | |
| TACTGGCCCAGGCAGATACA+GGG | + | chr3.1:82854819-82854838 | MS.gene32773:CDS | 55.0% | |
| TGTATCTGCCTGGGCCAGTA+GGG | - | chr3.1:82854819-82854838 | None:intergenic | 55.0% | |
| TGTATTTCCCCTACTGGCCC+AGG | + | chr3.1:82854808-82854827 | MS.gene32773:CDS | 55.0% | |
| TTAGTGGCGAGGGCAGAGTT+TGG | - | chr3.1:82855400-82855419 | None:intergenic | 55.0% | |
| ! | GTGGGGGTGTATTTGGGCTT+GGG | - | chr3.1:82853215-82853234 | None:intergenic | 55.0% |
| ! | TGGGGGTGTATTTGGGCTTG+GGG | - | chr3.1:82853214-82853233 | None:intergenic | 55.0% |
| ! | TGGGTTGAAGCAGTGTGTCC+AGG | + | chr3.1:82853767-82853786 | MS.gene32773:CDS | 55.0% |
| ! | TGTGGGGGTGTATTTGGGCT+TGG | - | chr3.1:82853216-82853235 | None:intergenic | 55.0% |
| !! | GGAGTTTAGGGCTTTGGAGG+TGG | + | chr3.1:82853625-82853644 | MS.gene32773:CDS | 55.0% |
| CGGGCCTCCACTAATGGAAG+AGG | + | chr3.1:82854040-82854059 | MS.gene32773:CDS | 60.0% | |
| CTACTGGCCCAGGCAGATAC+AGG | + | chr3.1:82854818-82854837 | MS.gene32773:CDS | 60.0% | |
| CTGTATCTGCCTGGGCCAGT+AGG | - | chr3.1:82854820-82854839 | None:intergenic | 60.0% | |
| GTATCTGCCTGGGCCAGTAG+GGG | - | chr3.1:82854818-82854837 | None:intergenic | 60.0% | |
| TCTCTCCGGGCCTCCACTAA+TGG | + | chr3.1:82854034-82854053 | MS.gene32773:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 82853006 | 82855904 | 82853006 | ID=MS.gene32773 |
| chr3.1 | mRNA | 82853006 | 82855904 | 82853006 | ID=MS.gene32773.t1;Parent=MS.gene32773 |
| chr3.1 | exon | 82853006 | 82854378 | 82853006 | ID=MS.gene32773.t1.exon1;Parent=MS.gene32773.t1 |
| chr3.1 | CDS | 82853006 | 82854378 | 82853006 | ID=cds.MS.gene32773.t1;Parent=MS.gene32773.t1 |
| chr3.1 | exon | 82854754 | 82854874 | 82854754 | ID=MS.gene32773.t1.exon2;Parent=MS.gene32773.t1 |
| chr3.1 | CDS | 82854754 | 82854874 | 82854754 | ID=cds.MS.gene32773.t1;Parent=MS.gene32773.t1 |
| chr3.1 | exon | 82854962 | 82855255 | 82854962 | ID=MS.gene32773.t1.exon3;Parent=MS.gene32773.t1 |
| chr3.1 | CDS | 82854962 | 82855255 | 82854962 | ID=cds.MS.gene32773.t1;Parent=MS.gene32773.t1 |
| chr3.1 | exon | 82855328 | 82855530 | 82855328 | ID=MS.gene32773.t1.exon4;Parent=MS.gene32773.t1 |
| chr3.1 | CDS | 82855328 | 82855530 | 82855328 | ID=cds.MS.gene32773.t1;Parent=MS.gene32773.t1 |
| chr3.1 | exon | 82855643 | 82855904 | 82855643 | ID=MS.gene32773.t1.exon5;Parent=MS.gene32773.t1 |
| chr3.1 | CDS | 82855643 | 82855904 | 82855643 | ID=cds.MS.gene32773.t1;Parent=MS.gene32773.t1 |
| Gene Sequence |
| Protein sequence |
